10/regulon10.rm.fna.peaks-rm/results/discovered_vs_db/peaks_motifs_vs_db_footDB.tab 
 compare-matrices  -v 1 -mode matches -format1 transfac -file1 10/regulon10.rm.fna.peaks-rm/results/discovered_motifs/peaks_motifs_discovered.tf -format2 transfac -file2 $RSAT/_footprintDB/footprintDB.transfac.plants.motif.tf -mode matches -DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.75 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,logoDP,NIcor,NsEucl,SSD,NSW,match_rank,width,strand,offset,consensus,alignments_1ton -sort Ncor -o 10/regulon10.rm.fna.peaks-rm/results/discovered_vs_db/peaks_motifs_vs_db_footDB.tab
 Program version       	1.118
 Slow mode 
 Input files
	file2 	$RSAT/_footprintDB/footprintDB.transfac.plants.motif.tf
	file1 	10/regulon10.rm.fna.peaks-rm/results/discovered_motifs/peaks_motifs_discovered.tf
 Output files
	alignments_1ton	10/regulon10.rm.fna.peaks-rm/results/discovered_vs_db/peaks_motifs_vs_db_footDB_alignments_1ton.tab
	match_table_txt	10/regulon10.rm.fna.peaks-rm/results/discovered_vs_db/peaks_motifs_vs_db_footDB.tab
	html_index   	10/regulon10.rm.fna.peaks-rm/results/discovered_vs_db/peaks_motifs_vs_db_footDB_index.html
	alignments_1ton_html	10/regulon10.rm.fna.peaks-rm/results/discovered_vs_db/peaks_motifs_vs_db_footDB_alignments_1ton.html
	match_table_html	10/regulon10.rm.fna.peaks-rm/results/discovered_vs_db/peaks_motifs_vs_db_footDB.html
	prefix       	10/regulon10.rm.fna.peaks-rm/results/discovered_vs_db/peaks_motifs_vs_db_footDB
 Matrices
	file1	9 matrices	10/regulon10.rm.fna.peaks-rm/results/discovered_motifs/peaks_motifs_discovered.tf
		file1	1	14	53	vrAAATATCTycwd
		file1	2	12	36	dwGTTTAAACwh
		file1	3	9	83	waAATCAwa
		file1	4	12	50	tyAGTCTCAamy
		file1	5	13	33	hwtaTTTAAACtt
		file1	6	14	42	wsAAATawmATCtw
		file1	7	10	28	wdGTTTAAww
		file1	8	24	46	wwAgcrAwwwhmwTywhrkAcaww
		file1	9	30	55	wwwyArawwwwATyTkwwtwwasmwwwdww
	file2	1055 matrices	$RSAT/_footprintDB/footprintDB.transfac.plants.motif.tf
		file2		1		16		5		TCATTCCACGTAGATr
		file2		2		8		5		awmAGTTr
		file2		3		8		3		rkTAGTTr
		file2		4		8		5		wamaGTTr
		file2		5		8		1		GTTAGTTA
		file2		6		8		2		kwCwGTTr
		file2		7		8		2		GTTAGTTr
		file2		8		8		6		wwmaGTTr
		file2		9		8		2		rsTkGTTr
		file2		10		8		8		RkTwGKTr
		file2		11		8		1		TACTGTTG
		...	1045 more matrices
 Column content
	1	id1          	Identifier of the first matrix
	2	id2          	Identifier of the second matrix
	3	name1        	Name of the first matrix
	4	name2        	Name of the second matrix
	5	cor          	Pearson coefficient of correlation between frequency matrices
	6	Ncor         	Normalized correlation. Ncor = cor * Wr
	7	logoDP       	Dot product between the logo matrices.
	8	NIcor        	Normalized Pearson correlation between the information content matrices. NIcor = Icor * Wr
	9	NSW          	Normalized Sandelin-Wasserman similarity. NSW = SW/w
	10	SSD          	sum of squared distance.
	11	NsEucl       	relative Euclidian similarity. NsEucl = (max(dEucl) - dEucl)/max(dEucl)
	12	w1           	Width of the first matrix
	13	w2           	Width of the second matrix
	14	w            	Alignment length (number of overlapping columns between matrix 1 and matrix 2, as a function of the offset)
	15	W            	Total alignment length (overlapping + non-overlapping columns). W = w1 + w2 - w
	16	Wr           	Relative alignment length (overlap divided by the total alignemnt length). Wr = w/W
	17	wr1          	Alignment length relative to the width of the first matrix. wr1 = w/w1
	18	wr2          	Alignment length relative to the width of the second matrix. wr2 = w/w2
	19	strand       	"strand", i.e. orientation of matrix 2 relative to matrix 1 (D=direct;  R=reverse)
	20	offset       	shift of the second matrix relative to the first matrix (negative:left; positive: right)
	21	consensus1   	IUPAC consensus of matrix 1 (dots represent non-aligned columns)
	22	consensus2   	IUPAC consensus of matrix 2 (dots represent non-aligned columns)
	23	rcor         	Matching rank for cor
	24	rNcor        	Matching rank for Ncor
	25	rlogoDP      	Matching rank for logoDP
	26	rNIcor       	Matching rank for NIcor
	27	rNsEucl      	Matching rank for NsEucl
	28	rSSD         	Matching rank for SSD
	29	rNSW         	Matching rank for NSW
	30	rank_mean    	Mean of the matching ranks on all selected metrics
	31	match_rank   	Rank of the match (sorting by rank_mean)
id1 id2 name1 name2 cor Ncor logoDP NIcor NSW SSD NsEucl w1 w2 w W Wr wr1 wr2 strand offset consensus1 consensus2 rcor rNcor rlogoDP rNIcor rNsEucl rSSD rNSW rank_mean match_rank
oligos_5-7nt_m1 CCA1_CCA1_ArabidopsisPBM oligos_5-7nt_m1 CCA1_CCA1_ArabidopsisPBM 0.987 0.705 8.672 0.704 0.990 0.1914 0.96906 14 10 10 14 0.7143 0.7143 1.0000 D 1 .rAAATATCTy... aAAATATCTt 2 13 6 11 2 2 2 5.4286 1
oligos_5-7nt_m1 RVE1_RVE1_ArabidopsisPBM oligos_5-7nt_m1 RVE1_RVE1_ArabidopsisPBM 0.976 0.697 7.901 0.701 0.987 0.2678 0.96341 14 10 10 14 0.7143 0.7143 1.0000 D 1 .rAAATATCTy... wAAATATCTk 3 14 10 12 3 3 3 6.8571 2
oligos_5-7nt_m3 HAT3_M0848_1.02_CISBP oligos_5-7nt_m3 HAT3_M0848_1.02_CISBP 0.929 0.826 4.614 0.844 0.964 0.5707 0.93322 9 8 8 9 0.8889 0.8889 1.0000 D 0 waAATCAw. syAATCAw 6 1 26 1 8 7 7 8.0000 3
oligos_5-7nt_m3 LOC_Os09g35910_M1108_1.02_CISBP oligos_5-7nt_m3 LOC_Os09g35910_M1108_1.02_CISBP 0.936 0.681 6.767 0.688 0.970 0.4764 0.93899 9 10 8 11 0.7273 0.8889 0.8000 D -2 waAATCAw. ..yyAATCAw 5 15 14 13 6 5 5 9.0000 4
oligos_5-7nt_m3 ATHB-7_MA0954.1_JASPAR oligos_5-7nt_m3 ATHB-7_MA0954.1_JASPAR 0.892 0.803 9.649 0.808 0.947 0.9614 0.92296 9 10 9 10 0.9000 1.0000 0.9000 D 0 waAATCAwa yCAATCAWt. 14 5 4 3 14 16 15 10.1429 5
oligos_5-7nt_m1 CCA1_MA0972.1_JASPAR oligos_5-7nt_m1 CCA1_MA0972.1_JASPAR 0.995 0.569 8.536 0.567 0.994 0.0884 0.97373 14 8 8 14 0.5714 0.5714 1.0000 D 2 ..AAATATCT.... AAATATCT 1 34 7 27 1 1 1 10.2857 6
oligos_5-7nt_m3 GRMZM2G038252_M1209_1.02_CISBP oligos_5-7nt_m3 GRMZM2G038252_M1209_1.02_CISBP 0.898 0.799 7.704 0.800 0.952 0.7722 0.92233 9 8 8 9 0.8889 0.8889 1.0000 D 0 waAATCAw. tCAATYAa 10 7 11 9 16 11 11 10.7143 7
oligos_5-7nt_m3 ATHB7_M0846_1.02_CISBP oligos_5-7nt_m3 ATHB7_M0846_1.02_CISBP 0.891 0.802 9.649 0.807 0.946 0.9671 0.92274 9 10 9 10 0.9000 1.0000 0.9000 D 0 waAATCAwa yCAATCAWt. 15 6 3 6 15 17 16 11.1429 8
oligos_5-7nt_m3 HAT1_MA1024.1_JASPAR oligos_5-7nt_m3 HAT1_MA1024.1_JASPAR 0.885 0.796 9.650 0.807 0.944 1.0097 0.92105 9 10 9 10 0.9000 1.0000 0.9000 D 0 waAATCAwa syAATCATk. 17 8 2 5 18 19 18 12.4286 9
oligos_5-7nt_m3 HAT1_M0851_1.02_CISBP oligos_5-7nt_m3 HAT1_M0851_1.02_CISBP 0.884 0.796 9.650 0.807 0.944 1.0139 0.92089 9 10 9 10 0.9000 1.0000 0.9000 D 0 waAATCAwa syAATCATk. 18 9 1 4 19 20 19 12.8571 10
oligos_5-7nt_m3 ATHB-4_M0845_1.02_CISBP oligos_5-7nt_m3 ATHB-4_M0845_1.02_CISBP 0.898 0.808 2.868 0.816 0.950 0.9020 0.92538 9 10 9 10 0.9000 1.0000 0.9000 D 0 waAATCAwa syAATcAtt. 12 4 37 2 11 13 12 13.0000 11
oligos_5-7nt_m5 AT2G20110_M0588_1.02_CISBP oligos_5-7nt_m5 AT2G20110_M0588_1.02_CISBP 0.909 0.559 5.836 0.522 0.954 0.7413 0.92390 13 8 8 13 0.6154 0.6154 1.0000 R 3 ...aTTTAAAC.. DTTTAAAY 9 35 17 34 13 10 10 18.2857 12
oligos_5-7nt_m1 CCA1_M01819_TRANSFAC oligos_5-7nt_m1 CCA1_M01819_TRANSFAC 0.873 0.631 8.927 0.624 0.938 1.6130 0.93092 14 17 13 18 0.7222 0.9286 0.7647 D -4 vrAAATATCTycw. ....rAAAAwATCTAar 20 20 5 18 9 40 21 19.0000 13
oligos_5-7nt_m2 AT2G20110_M0588_1.02_CISBP oligos_5-7nt_m2 AT2G20110_M0588_1.02_CISBP 0.892 0.595 6.987 0.578 0.943 0.9104 0.91566 12 8 8 12 0.6667 0.6667 1.0000 D 2 ..GTTTAAAC.. rTTTAAAh 13 29 13 25 23 14 20 19.5714 14
oligos_5-7nt_m1 PK02532.1_M1303_1.02_CISBP oligos_5-7nt_m1 PK02532.1_M1303_1.02_CISBP 0.945 0.608 2.859 0.029 0.967 0.5928 0.93951 14 9 9 14 0.6429 0.6429 1.0000 R 2 ..AAATATCTy... WAATATCTN 4 27 38 49 5 8 6 19.5714 15
oligos_5-7nt_m1 EPR1_M1317_1.02_CISBP oligos_5-7nt_m1 EPR1_M1317_1.02_CISBP 0.926 0.595 2.171 0.086 0.960 0.7134 0.93364 14 9 9 14 0.6429 0.6429 1.0000 R 1 .rAAATATCT.... WAAATATCT 7 28 40 48 7 9 9 21.1429 16
oligos_5-7nt_m3 ATWOX13_M0853_1.02_CISBP oligos_5-7nt_m3 ATWOX13_M0853_1.02_CISBP 0.859 0.763 8.096 0.757 0.926 1.1777 0.90408 9 8 8 9 0.8889 0.8889 1.0000 D 0 waAATCAw. TCAATCAa 24 11 8 10 37 28 33 21.5714 17
oligos_5-7nt_m3 ATHB6_M0843_1.02_CISBP oligos_5-7nt_m3 ATHB6_M0843_1.02_CISBP 0.816 0.816 4.783 0.806 0.928 1.2946 0.91060 9 9 9 9 1.0000 1.0000 1.0000 D 0 waAATCAwa byAATmATk 29 2 25 7 29 31 30 21.8571 18
oligos_5-7nt_m3 WOX13_WOX13_ArabidopsisPBM oligos_5-7nt_m3 WOX13_WOX13_ArabidopsisPBM 0.865 0.629 7.009 0.619 0.933 1.0640 0.90883 9 10 8 11 0.7273 0.8889 0.8000 D -2 waAATCAw. ..TCAATCAa 21 21 12 19 32 24 28 22.4286 19
oligos_5-7nt_m3 ATHB-6_MA0953.1_JASPAR oligos_5-7nt_m3 ATHB-6_MA0953.1_JASPAR 0.815 0.815 4.801 0.803 0.927 1.3055 0.91023 9 9 9 9 1.0000 1.0000 1.0000 D 0 waAATCAwa bcAATmATk 30 3 24 8 30 33 31 22.7143 20
dyads_test_vs_ctrl_m1 TIFY2A_M0760_1.02_CISBP dyads_test_vs_ctrl_m1 TIFY2A_M0760_1.02_CISBP 0.917 0.458 0.240 -0.099 0.975 0.3466 0.94053 14 7 7 14 0.5000 0.5000 1.0000 R 7 .......wmATCtw HSATCTD 8 50 56 57 4 4 4 26.1429 21
oligos_5-7nt_m1 PK08316.1_M1306_1.02_CISBP oligos_5-7nt_m1 PK08316.1_M1306_1.02_CISBP 0.883 0.631 2.053 0.602 0.934 1.3261 0.91857 14 10 10 14 0.7143 0.7143 1.0000 D 1 .rAAATATCTy... wwaawATCtw 19 19 43 22 21 34 27 26.4286 22
oligos_5-7nt_m1 LOC_Os08g06110_M1365_1.02_CISBP oligos_5-7nt_m1 LOC_Os08g06110_M1365_1.02_CISBP 0.898 0.578 0.593 -0.048 0.949 0.9244 0.92446 14 9 9 14 0.6429 0.6429 1.0000 R 2 ..AAATATCTy... AAATATCTW 11 31 53 52 12 15 14 26.8571 23
dyads_test_vs_ctrl_m2 AT2G20110_M0588_1.02_CISBP dyads_test_vs_ctrl_m2 AT2G20110_M0588_1.02_CISBP 0.834 0.667 7.963 0.625 0.909 1.4572 0.89330 10 8 8 10 0.8000 0.8000 1.0000 D 2 ..GTTTAAww rTTTAAAh 27 17 9 17 45 35 40 27.1429 24
oligos_5-7nt_m3 estExt_gwp_gw1.C_70211_M1195_1.02_CISBP oligos_5-7nt_m3 estExt_gwp_gw1.C_70211_M1195_1.02_CISBP 0.836 0.608 5.162 0.596 0.927 1.1659 0.90456 9 10 8 11 0.7273 0.8889 0.8000 D 1 .aAATCAwa yaATmAtk.. 26 26 21 24 36 27 32 27.4286 25
dyads_test_vs_ctrl_m1 TIFY2B_M0762_1.02_CISBP dyads_test_vs_ctrl_m1 TIFY2B_M0762_1.02_CISBP 0.888 0.444 0.270 -0.073 0.964 0.5099 0.92787 14 7 7 14 0.5000 0.5000 1.0000 R 6 ......awmATCt. HWSATCT 16 52 54 54 10 6 8 28.5714 26
oligos_5-7nt_m3 ATHB-12_MA0950.1_JASPAR oligos_5-7nt_m3 ATHB-12_MA0950.1_JASPAR 0.864 0.768 0.605 -0.075 0.936 1.0178 0.91083 9 8 8 9 0.8889 0.8889 1.0000 R 1 .aAATCAwa CAATCATT 23 10 52 55 27 22 24 30.4286 27
oligos_5-7nt_m3 ATHB12_ATHB12_ArabidopsisPBM oligos_5-7nt_m3 ATHB12_ATHB12_ArabidopsisPBM 0.839 0.755 0.617 -0.059 0.932 1.2324 0.91278 9 10 9 10 0.9000 1.0000 0.9000 R 0 waAATCAwa YCAATCATT. 25 12 51 53 25 30 29 32.1429 28
oligos_5-7nt_m2 BRADI1G55710_M0592_1.02_CISBP oligos_5-7nt_m2 BRADI1G55710_M0592_1.02_CISBP 0.811 0.675 1.558 0.664 0.909 1.8102 0.90486 12 10 10 12 0.8333 0.8333 1.0000 D 1 .wGTTTAAACw. mrTtyraAyk 33 16 45 14 35 48 39 32.8571 29
oligos_5-7nt_m5 BRADI1G55710_M0592_1.02_CISBP oligos_5-7nt_m5 BRADI1G55710_M0592_1.02_CISBP 0.813 0.625 1.370 0.629 0.918 1.6491 0.90920 13 10 10 13 0.7692 0.7692 1.0000 D 2 ..taTTTAAACt. mrTtyraAyk 32 24 49 16 31 43 36 33.0000 30
dyads_test_vs_ctrl_m1 GATA27_M0771_1.02_CISBP dyads_test_vs_ctrl_m1 GATA27_M0771_1.02_CISBP 0.802 0.516 0.191 -0.094 0.945 0.9833 0.92209 14 9 9 14 0.6429 0.6429 1.0000 R 5 .....TawmATCtw WWYGATCKR 34 43 58 56 17 18 17 34.7143 31
dyads_test_vs_ctrl_m1 PK27213.1_M1312_1.02_CISBP dyads_test_vs_ctrl_m1 PK27213.1_M1312_1.02_CISBP 0.813 0.407 0.195 -0.042 0.950 0.8044 0.92073 14 10 8 16 0.5000 0.5714 0.8000 R 6 ......awmATCtw STTATCYW.. 31 60 57 51 20 12 13 34.8571 32
oligos_5-7nt_m1 ARR11_ARR11_3_ArabidopsisPBM oligos_5-7nt_m1 ARR11_ARR11_3_ArabidopsisPBM 0.796 0.569 3.823 0.532 0.915 1.6986 0.90784 14 10 10 14 0.7143 0.7143 1.0000 D 2 ..AAATATCTyc.. wAAGATCTTk 36 33 30 32 33 46 37 35.2857 33
dyads_test_vs_ctrl_m2 TRANSCRIPTION_INITIATION_FACTOR_TFIID-1_1qna_B_3D-footprint dyads_test_vs_ctrl_m2 TRANSCRIPTION_INITIATION_FACTOR_TFIID-1_1qna_B_3D-footprint 0.865 0.551 2.666 0.100 0.922 1.0880 0.89463 10 8 7 11 0.6364 0.7000 0.8750 R 3 ...TTTAAww TTTAAAA. 22 38 39 47 43 25 34 35.4286 34
oligos_5-7nt_m2 fgeneshCV_pg.C_scaffold_18000164_M0599_1.02_CISBP oligos_5-7nt_m2 fgeneshCV_pg.C_scaffold_18000164_M0599_1.02_CISBP 0.785 0.654 1.532 0.630 0.903 1.9400 0.90151 12 10 10 12 0.8333 0.8333 1.0000 D 2 ..GTTTAAACwh dTTTraawww 37 18 46 15 39 50 43 35.4286 35
oligos_5-7nt_m5 SOL1_M0590_1.02_CISBP oligos_5-7nt_m5 SOL1_M0590_1.02_CISBP 0.832 0.512 4.548 0.440 0.919 1.2975 0.89932 13 8 8 13 0.6154 0.6154 1.0000 R 3 ...aTTTAAAC.. WTTYAAAY 28 45 28 40 41 32 35 35.5714 36
oligos_5-7nt_m3 YAB1_YAB1_ArabidopsisPBM oligos_5-7nt_m3 YAB1_YAB1_ArabidopsisPBM 0.782 0.569 4.031 0.533 0.905 1.5238 0.89089 9 10 8 11 0.7273 0.8889 0.8000 D 1 .aAATCAwa ywATmATA.. 40 32 29 31 46 36 42 36.5714 37
oligos_5-7nt_m5 fgeneshCV_pg.C_scaffold_18000164_M0599_1.02_CISBP oligos_5-7nt_m5 fgeneshCV_pg.C_scaffold_18000164_M0599_1.02_CISBP 0.771 0.593 1.419 0.597 0.910 1.7970 0.90521 13 10 10 13 0.7692 0.7692 1.0000 D 3 ...aTTTAAACtt dTTTraawww 42 30 48 23 34 47 38 37.4286 38
oligos_5-7nt_m2 AT3G04850_M0589_1.02_CISBP oligos_5-7nt_m2 AT3G04850_M0589_1.02_CISBP 0.751 0.626 2.991 0.617 0.902 1.9646 0.90089 12 10 10 12 0.8333 0.8333 1.0000 R 1 .wGTTTAAACw. AWTTYRAAWT 59 22 33 20 40 51 44 38.4286 39
oligos_5-7nt_m2 SOL1_M0590_1.02_CISBP oligos_5-7nt_m2 SOL1_M0590_1.02_CISBP 0.799 0.532 5.746 0.511 0.898 1.6297 0.88716 12 8 8 12 0.6667 0.6667 1.0000 R 2 ..GTTTAAAC.. WTTYAAAY 35 41 19 35 50 42 48 38.5714 40
oligos_5-7nt_m1 RVE1_RVE1_2_ArabidopsisPBM oligos_5-7nt_m1 RVE1_RVE1_2_ArabidopsisPBM 0.773 0.552 2.891 0.534 0.908 1.8452 0.90395 14 10 10 14 0.7143 0.7143 1.0000 D 2 ..AAATATCTyc.. smatATCwaw 41 37 35 30 38 49 41 38.7143 41
dyads_test_vs_ctrl_m2 SOL1_M0590_1.02_CISBP dyads_test_vs_ctrl_m2 SOL1_M0590_1.02_CISBP 0.763 0.610 6.428 0.552 0.875 2.0063 0.87480 10 8 8 10 0.8000 0.8000 1.0000 D 2 ..GTTTAAww rTTTrAAw 47 25 15 28 53 53 55 39.4286 42
dyads_test_vs_ctrl_m1 PK29550.1_M1314_1.02_CISBP dyads_test_vs_ctrl_m1 PK29550.1_M1314_1.02_CISBP 0.751 0.451 1.501 0.240 0.934 1.1898 0.91430 14 10 9 15 0.6000 0.6429 0.9000 R 5 .....TawmATCtw YCTTATCYR. 56 51 47 46 24 29 26 39.8571 43
oligos_5-7nt_m3 APRR2_M1332_1.02_CISBP oligos_5-7nt_m3 APRR2_M1332_1.02_CISBP 0.767 0.558 2.954 0.571 0.898 1.6286 0.88720 9 10 8 11 0.7273 0.8889 0.8000 D -2 waAATCAw. ..rwaATCya 46 36 34 26 49 41 47 39.8571 44
dyads_test_vs_ctrl_m1 AT5G08520_M1339_1.02_CISBP dyads_test_vs_ctrl_m1 AT5G08520_M1339_1.02_CISBP 0.760 0.489 0.256 -0.127 0.936 1.1440 0.91597 14 9 9 14 0.6429 0.6429 1.0000 R 5 .....TawmATCtw CCYTATCYD 48 47 55 60 22 26 23 40.1429 45
dyads_test_vs_ctrl_m1 GATA15_MA1016.1_JASPAR dyads_test_vs_ctrl_m1 GATA15_MA1016.1_JASPAR 0.785 0.418 0.185 -0.110 0.936 1.0163 0.91089 14 9 8 15 0.5333 0.5714 0.8889 R 6 ......awmATCtw YYGATCRY. 38 57 60 59 26 21 22 40.4286 46
oligos_5-7nt_m1 AHL20_AHL20_ArabidopsisPBM oligos_5-7nt_m1 AHL20_AHL20_ArabidopsisPBM 0.768 0.548 5.407 0.522 0.892 2.1635 0.89599 14 10 10 14 0.7143 0.7143 1.0000 D 2 ..AAATATCTyc.. wAATATATTw 45 39 20 33 42 58 50 41.0000 47
dyads_test_vs_ctrl_m1 GATA15_M0761_1.02_CISBP dyads_test_vs_ctrl_m1 GATA15_M0761_1.02_CISBP 0.784 0.418 0.186 -0.109 0.936 1.0182 0.91081 14 9 8 15 0.5333 0.5714 0.8889 R 6 ......awmATCtw YYGATCRY. 39 58 59 58 28 23 25 41.4286 48
oligos_5-7nt_m3 e_gw1.362.4.1_M1384_1.02_CISBP oligos_5-7nt_m3 e_gw1.362.4.1_M1384_1.02_CISBP 0.754 0.548 5.091 0.541 0.896 1.6668 0.88589 9 10 8 11 0.7273 0.8889 0.8000 D -2 waAATCAw. ..mrdATCtw 55 40 23 29 51 44 49 41.5714 49
dyads_test_vs_ctrl_m1 Medtr8g106590.1_M0145_1.02_CISBP dyads_test_vs_ctrl_m1 Medtr8g106590.1_M0145_1.02_CISBP 0.758 0.433 3.107 0.413 0.900 1.6008 0.88817 14 8 8 14 0.5714 0.5714 1.0000 D 3 ...AATawmAT... AAAWTAAT 50 53 32 42 47 38 45 43.8571 50
oligos_5-7nt_m2 gw1.20.00.89.1_M0601_1.02_CISBP oligos_5-7nt_m2 gw1.20.00.89.1_M0601_1.02_CISBP 0.750 0.625 0.878 0.611 0.887 2.2636 0.89361 12 10 10 12 0.8333 0.8333 1.0000 D 1 .wGTTTAAACw. awttyraawt 60 23 50 21 44 59 51 44.0000 51
oligos_5-7nt_m5 TRANSCRIPTION_INITIATION_FACTOR_TFIID-1_1qna_B_3D-footprint oligos_5-7nt_m5 TRANSCRIPTION_INITIATION_FACTOR_TFIID-1_1qna_B_3D-footprint 0.760 0.468 5.152 0.472 0.877 1.9727 0.87586 13 8 8 13 0.6154 0.6154 1.0000 D 2 ..taTTTAAA... CTTTTAAA 49 48 22 39 52 52 54 45.1429 52
oligos_5-7nt_m3 estExt_fgenesh1_pg.C_Chr_16.00010090_M1397_1.02_CISBP oligos_5-7nt_m3 estExt_fgenesh1_pg.C_Chr_16.00010090_M1397_1.02_CISBP 0.756 0.529 3.196 0.509 0.880 1.6853 0.86886 9 8 7 10 0.7000 0.7778 0.8750 D -1 waAATCA.. .mrdATct 53 42 31 36 59 45 53 45.5714 53
dyads_test_vs_ctrl_m1 AHL20_MA0933.1_JASPAR dyads_test_vs_ctrl_m1 AHL20_MA0933.1_JASPAR 0.751 0.429 2.873 0.392 0.900 1.6036 0.88807 14 8 8 14 0.5714 0.5714 1.0000 D 3 ...AATawmAT... AATWAAwT 57 56 36 44 48 39 46 46.5714 54
oligos_5-7nt_m4 ARF_M00438_TRANSFAC oligos_5-7nt_m4 ARF_M00438_TRANSFAC 0.751 0.501 5.913 0.494 0.869 2.1036 0.87180 12 8 8 12 0.6667 0.6667 1.0000 D 0 tyAGTCTC.... yTTGTCtC 58 46 16 38 56 55 57 46.5714 55
dyads_test_vs_ctrl_m2 WOX13_WOX13_2_ArabidopsisPBM dyads_test_vs_ctrl_m2 WOX13_WOX13_2_ArabidopsisPBM 0.769 0.414 2.144 0.364 0.887 1.5857 0.87280 10 10 7 13 0.5385 0.7000 0.7000 D 3 ...TTTAAww tttAATT... 43 59 41 45 55 37 52 47.4286 56
dyads_test_vs_ctrl_m2 fgeneshCV_pg.C_scaffold_18000164_M0599_1.02_CISBP dyads_test_vs_ctrl_m2 fgeneshCV_pg.C_scaffold_18000164_M0599_1.02_CISBP 0.769 0.512 2.078 0.502 0.867 2.1252 0.87115 10 10 8 12 0.6667 0.8000 0.8000 D 2 ..GTTTAAww dTTTraaw.. 44 44 42 37 57 56 58 48.2857 57
oligos_5-7nt_m1 PRH_M1167_1.02_CISBP oligos_5-7nt_m1 PRH_M1167_1.02_CISBP 0.756 0.432 5.785 0.430 0.867 2.1320 0.87094 14 8 8 14 0.5714 0.5714 1.0000 D 4 ....ATATCTyc.. ATATATwA 52 55 18 41 58 57 59 48.5714 58
dyads_test_vs_ctrl_m1 CCA1_MA0972.1_JASPAR dyads_test_vs_ctrl_m1 CCA1_MA0972.1_JASPAR 0.757 0.433 4.603 0.411 0.856 2.3055 0.86579 14 8 8 14 0.5714 0.5714 1.0000 D 2 ..AAATawmA.... AAATATCT 51 54 27 43 60 60 60 50.7143 59
oligos_5-7nt_m5 TRANSCRIPTION_INITIATION_FACTOR_TFIID-1_1qn3_B_3D-footprint oligos_5-7nt_m5 TRANSCRIPTION_INITIATION_FACTOR_TFIID-1_1qn3_B_3D-footprint 0.755 0.465 1.703 0.027 0.873 2.0373 0.87384 13 8 8 13 0.6154 0.6154 1.0000 R 4 ....TTTAAACt. TATAAACG 54 49 44 50 54 54 56 51.5714 60 
 Host name	baobab.eead.csic.es
 Job started	2016-06-03.161201
 Job done	2016-06-03.161335
 Seconds	69.91
	user	69.91
	system	3.1
	cuser	16.97
;	csystem	3.88