E2F/regulonE2F.rm.fna.peaks-rm/results/discovered_vs_db/peaks_motifs_vs_db_footDB.tab 
 compare-matrices  -v 1 -mode matches -format1 transfac -file1 E2F/regulonE2F.rm.fna.peaks-rm/results/discovered_motifs/peaks_motifs_discovered.tf -format2 transfac -file2 $RSAT/_footprintDB/footprintDB.transfac.plants.motif.tf -mode matches -DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.75 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,logoDP,NIcor,NsEucl,SSD,NSW,match_rank,width,strand,offset,consensus,alignments_1ton -sort Ncor -o E2F/regulonE2F.rm.fna.peaks-rm/results/discovered_vs_db/peaks_motifs_vs_db_footDB.tab
 Program version       	1.118
 Slow mode 
 Input files
	file2 	$RSAT/_footprintDB/footprintDB.transfac.plants.motif.tf
	file1 	E2F/regulonE2F.rm.fna.peaks-rm/results/discovered_motifs/peaks_motifs_discovered.tf
 Output files
	alignments_1ton	E2F/regulonE2F.rm.fna.peaks-rm/results/discovered_vs_db/peaks_motifs_vs_db_footDB_alignments_1ton.tab
	match_table_txt	E2F/regulonE2F.rm.fna.peaks-rm/results/discovered_vs_db/peaks_motifs_vs_db_footDB.tab
	html_index   	E2F/regulonE2F.rm.fna.peaks-rm/results/discovered_vs_db/peaks_motifs_vs_db_footDB_index.html
	alignments_1ton_html	E2F/regulonE2F.rm.fna.peaks-rm/results/discovered_vs_db/peaks_motifs_vs_db_footDB_alignments_1ton.html
	match_table_html	E2F/regulonE2F.rm.fna.peaks-rm/results/discovered_vs_db/peaks_motifs_vs_db_footDB.html
	prefix       	E2F/regulonE2F.rm.fna.peaks-rm/results/discovered_vs_db/peaks_motifs_vs_db_footDB
 Matrices
	file1	10 matrices	E2F/regulonE2F.rm.fna.peaks-rm/results/discovered_motifs/peaks_motifs_discovered.tf
		file1	1	20	35	grrggwTkTGGCGGGAAgrg
		file1	2	13	32	yycCAGCCCAmvr
		file1	3	22	32	grgsgdtkTGGCGGGAArwgkg
		file1	4	14	17	rgATGGGCCCATsy
		file1	5	20	27	chctTCCCGCCAmawcbcyc
		file1	6	15	44	kykTGGCGGGAArag
		file1	7	11	41	kyCCAGCCCam
		file1	8	15	22	gwctTCCAGCCCAad
		file1	9	12	96	rsGAGGmGGCsg
		file1	10	11	57	wkAATTTGGty
	file2	887 matrices	$RSAT/_footprintDB/footprintDB.transfac.plants.motif.tf
		file2		1		16		5		TCATTCCACGTAGATr
		file2		2		6		96		GTnAnA
		file2		3		9		96		TGGTnnnTA
		file2		4		9		96		tGGtnnnnA
		file2		5		18		96		TGCnTGnnnnnnaCGcAA
		file2		6		6		96		TGCnTG
		file2		7		5		96		CGAAG
		file2		8		16		96		CgnTTcnAnnnCGAAG
		file2		9		7		96		GGrmGsy
		file2		10		18		96		GGnCGACCnnnGGrCGgT
		file2		11		9		96		TTGTnTCCC
		...	877 more matrices
 Column content
	1	id1          	Identifier of the first matrix
	2	id2          	Identifier of the second matrix
	3	name1        	Name of the first matrix
	4	name2        	Name of the second matrix
	5	cor          	Pearson coefficient of correlation between frequency matrices
	6	Ncor         	Normalized correlation. Ncor = cor * Wr
	7	logoDP       	Dot product between the logo matrices.
	8	NIcor        	Normalized Pearson correlation between the information content matrices. NIcor = Icor * Wr
	9	NSW          	Normalized Sandelin-Wasserman similarity. NSW = SW/w
	10	SSD          	sum of squared distance.
	11	NsEucl       	relative Euclidian similarity. NsEucl = (max(dEucl) - dEucl)/max(dEucl)
	12	w1           	Width of the first matrix
	13	w2           	Width of the second matrix
	14	w            	Alignment length (number of overlapping columns between matrix 1 and matrix 2, as a function of the offset)
	15	W            	Total alignment length (overlapping + non-overlapping columns). W = w1 + w2 - w
	16	Wr           	Relative alignment length (overlap divided by the total alignemnt length). Wr = w/W
	17	wr1          	Alignment length relative to the width of the first matrix. wr1 = w/w1
	18	wr2          	Alignment length relative to the width of the second matrix. wr2 = w/w2
	19	strand       	"strand", i.e. orientation of matrix 2 relative to matrix 1 (D=direct;  R=reverse)
	20	offset       	shift of the second matrix relative to the first matrix (negative:left; positive: right)
	21	consensus1   	IUPAC consensus of matrix 1 (dots represent non-aligned columns)
	22	consensus2   	IUPAC consensus of matrix 2 (dots represent non-aligned columns)
	23	rcor         	Matching rank for cor
	24	rNcor        	Matching rank for Ncor
	25	rlogoDP      	Matching rank for logoDP
	26	rNIcor       	Matching rank for NIcor
	27	rNsEucl      	Matching rank for NsEucl
	28	rSSD         	Matching rank for SSD
	29	rNSW         	Matching rank for NSW
	30	rank_mean    	Mean of the matching ranks on all selected metrics
	31	match_rank   	Rank of the match (sorting by rank_mean)
id1 id2 name1 name2 cor Ncor logoDP NIcor NSW SSD NsEucl w1 w2 w W Wr wr1 wr2 strand offset consensus1 consensus2 rcor rNcor rlogoDP rNIcor rNsEucl rSSD rNSW rank_mean match_rank
dyads_test_vs_ctrl_m1 1437_M01839_TRANSFAC_2012.1_ dyads_test_vs_ctrl_m1 1437_M01839_TRANSFAC_2012.1_ 0.987 0.461 7.416 0.461 0.992 0.1184 0.96524 15 7 7 15 0.4667 0.4667 1.0000 D 3 ...TGGCGGG..... WGGCGGG 1 43 2 10 1 1 1 8.4286 1
oligos_5-7nt_m5 5016_E2Fc_Athamap_20091028__E2Fd_Athamap_20091028_ oligos_5-7nt_m5 5016_E2Fc_Athamap_20091028__E2Fd_Athamap_20091028_ 0.922 0.507 9.355 0.508 0.960 0.8853 0.93952 20 11 11 20 0.5500 0.5500 1.0000 D 3 ...tTCCCGCCAma...... TTCCCGCcmww 7 32 1 7 5 10 5 9.5714 2
dyads_test_vs_ctrl_m1 5016_E2Fc_Athamap_20091028__E2Fd_Athamap_20091028_ dyads_test_vs_ctrl_m1 5016_E2Fc_Athamap_20091028__E2Fd_Athamap_20091028_ 0.927 0.680 1.454 -0.088 0.965 0.7712 0.94355 15 11 11 15 0.7333 0.7333 1.0000 R 1 .ykTGGCGGGAA... WWKGGCGGGAA 4 1 33 38 2 5 2 12.1429 3
oligos_5-7nt_m4 11811_TCP2_M1648_1.02_CISBP_1.02_ oligos_5-7nt_m4 11811_TCP2_M1648_1.02_CISBP_1.02_ 0.813 0.581 4.560 0.578 0.924 1.5187 0.91286 14 10 10 14 0.7143 0.7143 1.0000 R 2 ..ATGGGCCCAT.. GTGGKMCCAC 21 10 12 1 15 25 21 15.0000 4
dyads_test_vs_ctrl_m4 1584_M01999_TRANSFAC_2012.1_ dyads_test_vs_ctrl_m4 1584_M01999_TRANSFAC_2012.1_ 0.848 0.565 5.363 0.568 0.922 1.2480 0.90126 12 8 8 12 0.6667 0.6667 1.0000 D 4 ....GGmGGCsg GGCGGCTb 15 15 9 4 32 16 23 16.2857 5
oligos_5-7nt_m4 11280_LOC_Os02g42380_M1657_1.02_CISBP_1.02_ oligos_5-7nt_m4 11280_LOC_Os02g42380_M1657_1.02_CISBP_1.02_ 0.810 0.579 5.310 0.577 0.922 1.5617 0.91163 14 10 10 14 0.7143 0.7143 1.0000 D 2 ..ATGGGCCCAT.. kkGGgcCCmm 23 12 10 2 17 27 24 16.4286 6
oligos_5-7nt_m1 5016_E2Fc_Athamap_20091028__E2Fd_Athamap_20091028_ oligos_5-7nt_m1 5016_E2Fc_Athamap_20091028__E2Fd_Athamap_20091028_ 0.922 0.507 1.522 -0.041 0.961 0.8522 0.94066 20 11 11 20 0.5500 0.5500 1.0000 R 6 ......TkTGGCGGGAA... WWKGGCGGGAA 6 31 32 35 3 7 3 16.7143 7
dyads_test_vs_ctrl_m4 5032_NtERF2_Athamap_20091028_ dyads_test_vs_ctrl_m4 5032_NtERF2_Athamap_20091028_ 0.871 0.508 2.089 0.232 0.948 0.7301 0.91368 12 7 7 12 0.5833 0.5833 1.0000 R 4 ....GGmGGCs. GGCGGCR 11 30 29 28 13 3 9 17.5714 8
oligos_5-7nt_m3 5016_E2Fc_Athamap_20091028__E2Fd_Athamap_20091028_ oligos_5-7nt_m3 5016_E2Fc_Athamap_20091028__E2Fd_Athamap_20091028_ 0.923 0.462 1.647 -0.057 0.961 0.8638 0.94025 22 11 11 22 0.5000 0.5000 1.0000 R 6 ......tkTGGCGGGAA..... WWKGGCGGGAA 5 41 31 36 4 8 4 18.4286 9
dyads_test_vs_ctrl_m4 10654_AT3G23230_M0024_1.02_CISBP_1.02_ dyads_test_vs_ctrl_m4 10654_AT3G23230_M0024_1.02_CISBP_1.02_ 0.870 0.580 0.223 -0.140 0.956 0.7097 0.92554 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GGmGGCsg GGCGGCKS 12 11 50 46 6 2 6 19.0000 10
dyads_test_vs_ctrl_m4 755_M01057_TRANSFAC_2012.1_ dyads_test_vs_ctrl_m4 755_M01057_TRANSFAC_2012.1_ 0.877 0.512 2.625 0.220 0.936 0.8973 0.90431 12 7 7 12 0.5833 0.5833 1.0000 R 4 ....GGmGGCs. GGCGGCG 9 28 25 29 27 11 13 20.2857 11
dyads_test_vs_ctrl_m4 10683_ATERF-4_M0022_1.02_CISBP_1.02_ dyads_test_vs_ctrl_m4 10683_ATERF-4_M0022_1.02_CISBP_1.02_ 0.875 0.584 0.364 -0.174 0.946 0.8680 0.91765 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GGmGGCsg GGCGGCGG 10 8 48 50 11 9 10 20.8571 12
dyads_test_vs_ctrl_m1 5014_E2Fa_Athamap_20091028__E2Fe_Athamap_20091028_ dyads_test_vs_ctrl_m1 5014_E2Fa_Athamap_20091028__E2Fe_Athamap_20091028_ 0.931 0.497 0.452 -0.177 0.953 0.7518 0.92336 15 8 8 15 0.5333 0.5333 1.0000 R 5 .....GCGGGAAr.. GCGGGAAW 2 35 43 52 8 4 7 21.5714 13
dyads_test_vs_ctrl_m4 10682_ATERF-1_M0028_1.02_CISBP_1.02_ dyads_test_vs_ctrl_m4 10682_ATERF-1_M0028_1.02_CISBP_1.02_ 0.791 0.593 0.964 0.175 0.931 1.2505 0.91214 12 9 9 12 0.7500 0.7500 1.0000 R 3 ...AGGmGGCsg KGRCGGCKS 29 6 35 31 16 17 17 21.5714 14
dyads_test_vs_ctrl_m4 8786_MA0123_JASPAR_2014_ dyads_test_vs_ctrl_m4 8786_MA0123_JASPAR_2014_ 0.816 0.466 2.230 0.242 0.939 0.9707 0.91291 12 10 8 14 0.5714 0.6667 0.8000 R 4 ....GGmGGCsg GGGGGCRS.. 20 39 28 27 14 12 11 21.5714 15
dyads_test_vs_ctrl_m4 10843_CRF2_M0029_1.02_CISBP_1.02_ dyads_test_vs_ctrl_m4 10843_CRF2_M0029_1.02_CISBP_1.02_ 0.879 0.586 0.369 -0.154 0.936 1.0215 0.91067 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GGmGGCsg GGCGGCGS 8 7 47 49 18 13 12 22.0000 16
oligos_5-7nt_m4 11547_OsI_08196_M1658_1.02_CISBP_1.02_ oligos_5-7nt_m4 11547_OsI_08196_M1658_1.02_CISBP_1.02_ 0.839 0.479 6.088 0.469 0.912 1.4118 0.89498 14 8 8 14 0.5714 0.5714 1.0000 D 4 ....GGGCCCAT.. GGGCCCAC 16 38 7 9 35 20 31 22.2857 17
dyads_test_vs_ctrl_m1 5015_E2Fb_Athamap_20091028_ dyads_test_vs_ctrl_m1 5015_E2Fb_Athamap_20091028_ 0.928 0.495 0.450 -0.176 0.950 0.7986 0.92101 15 8 8 15 0.5333 0.5333 1.0000 R 5 .....GCGGGAAr.. GCGGGAAW 3 36 44 51 9 6 8 22.4286 18
dyads_test_vs_ctrl_m4 7202_ATERF1_ArabidopsisPBM_20140210_ dyads_test_vs_ctrl_m4 7202_ATERF1_ArabidopsisPBM_20140210_ 0.807 0.461 2.357 0.446 0.934 1.0597 0.90901 12 10 8 14 0.5714 0.6667 0.8000 D 4 ....GGmGGCsg GGcGsCGs.. 25 42 27 11 22 15 16 22.5714 19
dyads_test_vs_ctrl_m1 802_M01114_TRANSFAC_2012.1_ dyads_test_vs_ctrl_m1 802_M01114_TRANSFAC_2012.1_ 0.834 0.612 0.869 -0.122 0.926 1.6359 0.91778 15 11 11 15 0.7333 0.7333 1.0000 R 4 ....GGCGGGAArag SSCGSSAAARR 17 5 37 44 10 30 19 23.1429 20
dyads_test_vs_ctrl_m4 2148_M03201_TRANSFAC_2012.1_ dyads_test_vs_ctrl_m4 2148_M03201_TRANSFAC_2012.1_ 0.782 0.651 3.457 0.321 0.912 1.7505 0.90645 12 10 10 12 0.8333 0.8333 1.0000 R 2 ..GAGGmGGCsg KRGSCGGCAW 32 2 20 18 25 36 29 23.1429 21
dyads_test_vs_ctrl_m4 10845_CRF4_M0033_1.02_CISBP_1.02_ dyads_test_vs_ctrl_m4 10845_CRF4_M0033_1.02_CISBP_1.02_ 0.865 0.576 0.437 -0.122 0.934 1.0560 0.90917 12 8 8 12 0.6667 0.6667 1.0000 R 4 ....GGmGGCsg GGCGGCGS 13 13 45 43 21 14 15 23.4286 22
dyads_test_vs_ctrl_m4 10844_CRF3_M0041_1.02_CISBP_1.02_ dyads_test_vs_ctrl_m4 10844_CRF3_M0041_1.02_CISBP_1.02_ 0.776 0.582 0.947 0.198 0.926 1.3315 0.90934 12 9 9 12 0.7500 0.7500 1.0000 R 3 ...AGGmGGCsg TGGCGGCGS 38 9 36 30 20 18 18 24.1429 23
dyads_test_vs_ctrl_m4 11540_ORA59_M0005_1.02_CISBP_1.02_ dyads_test_vs_ctrl_m4 11540_ORA59_M0005_1.02_CISBP_1.02_ 0.818 0.545 3.669 0.287 0.909 1.4534 0.89344 12 8 8 12 0.6667 0.6667 1.0000 R 3 ...AGGmGGCs. CGGCGGCK 19 19 17 21 38 23 33 24.2857 24
dyads_test_vs_ctrl_m3 5016_E2Fc_Athamap_20091028__E2Fd_Athamap_20091028_ dyads_test_vs_ctrl_m3 5016_E2Fc_Athamap_20091028__E2Fd_Athamap_20091028_ 0.779 0.572 6.027 0.536 0.898 2.2408 0.90377 15 11 11 15 0.7333 0.7333 1.0000 D 3 ...tTCCAGCCCAa. TTCCCGCcmww 34 14 8 6 29 49 36 25.1429 25
oligos_5-7nt_m4 11598_PK14653.1_M1643_1.02_CISBP_1.02_ oligos_5-7nt_m4 11598_PK14653.1_M1643_1.02_CISBP_1.02_ 0.777 0.555 3.644 0.562 0.909 1.8263 0.90444 14 10 10 14 0.7143 0.7143 1.0000 D 2 ..ATGGGCCCAT.. gTGGGCCCAc 37 18 18 5 26 41 34 25.5714 26
oligos_5-7nt_m5 802_M01114_TRANSFAC_2012.1_ oligos_5-7nt_m5 802_M01114_TRANSFAC_2012.1_ 0.804 0.442 7.380 0.426 0.912 1.9366 0.91054 20 11 11 20 0.5500 0.5500 1.0000 D 0 chctTCCCGCC......... yyTTTSsCGss 26 45 3 15 19 43 30 25.8571 27
dyads_test_vs_ctrl_m4 10686_ATERF13_M0020_1.02_CISBP_1.02_ dyads_test_vs_ctrl_m4 10686_ATERF13_M0020_1.02_CISBP_1.02_ 0.803 0.535 3.371 0.289 0.911 1.4314 0.89425 12 8 8 12 0.6667 0.6667 1.0000 R 3 ...AGGmGGCs. YGGCGGCS 27 24 22 20 37 22 32 26.2857 28
oligos_5-7nt_m3 802_M01114_TRANSFAC_2012.1_ oligos_5-7nt_m3 802_M01114_TRANSFAC_2012.1_ 0.861 0.430 0.690 -0.117 0.935 1.4201 0.92340 22 11 11 22 0.5000 0.5000 1.0000 R 9 .........GGCGGGAArwg.. SSCGSSAAARR 14 47 40 42 7 21 14 26.4286 29
oligos_5-7nt_m4 11809_TCP20_M1647_1.02_CISBP_1.02_ oligos_5-7nt_m4 11809_TCP20_M1647_1.02_CISBP_1.02_ 0.781 0.558 0.976 -0.012 0.916 1.6820 0.90829 14 10 10 14 0.7143 0.7143 1.0000 R 0 rgATGGGCCC.... TKGTGGGSCC 33 17 34 34 24 32 26 28.5714 30
dyads_test_vs_ctrl_m4 7216_DEAR4_2_ArabidopsisPBM_20140210_ dyads_test_vs_ctrl_m4 7216_DEAR4_2_ArabidopsisPBM_20140210_ 0.813 0.563 0.777 -0.074 0.913 1.5730 0.90146 12 10 9 13 0.6923 0.7500 0.9000 R 3 ...AGGmGGCsg AGGCGGCGC. 22 16 39 37 31 29 28 28.8571 31
dyads_test_vs_ctrl_m4 7219_DREB2C_ArabidopsisPBM_20140210_ dyads_test_vs_ctrl_m4 7219_DREB2C_ArabidopsisPBM_20140210_ 0.809 0.462 4.093 0.428 0.895 1.6855 0.88525 12 10 8 14 0.5714 0.6667 0.8000 R 4 ....GGmGGCsg GGCGGCCG.. 24 40 13 13 43 33 38 29.1429 32
oligos_5-7nt_m1 802_M01114_TRANSFAC_2012.1_ oligos_5-7nt_m1 802_M01114_TRANSFAC_2012.1_ 0.826 0.454 0.824 -0.091 0.922 1.7088 0.91597 20 11 11 20 0.5500 0.5500 1.0000 R 9 .........GGCGGGAAgrg SSCGSSAAARR 18 44 38 40 12 35 22 29.8571 33
dyads_test_vs_ctrl_m4 10960_ERF1_M0025_1.02_CISBP_1.02_ dyads_test_vs_ctrl_m4 10960_ERF1_M0025_1.02_CISBP_1.02_ 0.750 0.625 3.700 0.318 0.890 2.1970 0.89519 12 10 10 12 0.8333 0.8333 1.0000 R 2 ..GAGGmGGCsg RYGGCGGCKS 52 4 16 19 34 46 41 30.2857 34
dyads_test_vs_ctrl_m4 10961_ERF2_M0038_1.02_CISBP_1.02_ dyads_test_vs_ctrl_m4 10961_ERF2_M0038_1.02_CISBP_1.02_ 0.778 0.539 0.181 -0.139 0.925 1.3460 0.90885 12 10 9 13 0.6923 0.7500 0.9000 R 3 ...AGGmGGCsg TGGCGGCKS. 35 22 51 45 23 19 20 30.7143 35
dyads_test_vs_ctrl_m4 2154_M03207_TRANSFAC_2012.1_ dyads_test_vs_ctrl_m4 2154_M03207_TRANSFAC_2012.1_ 0.760 0.633 3.741 0.272 0.889 2.2264 0.89449 12 10 10 12 0.8333 0.8333 1.0000 R 2 ..GAGGmGGCsg GTGGCGGCMW 46 3 15 24 36 48 43 30.7143 36
dyads_test_vs_ctrl_m4 9050_MA0567_JASPAR_2014_ dyads_test_vs_ctrl_m4 9050_MA0567_JASPAR_2014_ 0.791 0.527 3.336 0.280 0.895 1.6858 0.88524 12 8 8 12 0.6667 0.6667 1.0000 R 3 ...AGGmGGCs. TGGCGGCK 30 27 23 23 44 34 39 31.4286 37
dyads_test_vs_ctrl_m4 10660_AT4G00270_M1620_1.02_CISBP_1.02_ dyads_test_vs_ctrl_m4 10660_AT4G00270_M1620_1.02_CISBP_1.02_ 0.793 0.427 3.622 0.352 0.889 1.5569 0.87396 12 8 7 13 0.5385 0.5833 0.8750 R 5 .....GmGGCsg GCGGCCG. 28 50 19 17 48 26 42 32.8571 38
dyads_test_vs_ctrl_m4 7246_ORA47_2_ArabidopsisPBM_20140210_ dyads_test_vs_ctrl_m4 7246_ORA47_2_ArabidopsisPBM_20140210_ 0.783 0.542 0.682 -0.090 0.902 1.7676 0.89554 12 10 9 13 0.6923 0.7500 0.9000 R 3 ...AGGmGGCsg RGKCGGCGC. 31 20 41 39 33 37 35 33.7143 39
oligos_5-7nt_m4 11146_Glyma19g26560.1_M1661_1.02_CISBP_1.02_ oligos_5-7nt_m4 11146_Glyma19g26560.1_M1661_1.02_CISBP_1.02_ 0.751 0.483 5.083 0.472 0.883 2.1052 0.88600 14 9 9 14 0.6429 0.6429 1.0000 D 3 ...TGGGCCCAT.. gGGsCCCAC 51 37 11 8 41 44 47 34.1429 40
dyads_test_vs_ctrl_m4 10565_0100010458_M0076_1.02_CISBP_1.02_ dyads_test_vs_ctrl_m4 10565_0100010458_M0076_1.02_CISBP_1.02_ 0.767 0.511 3.866 0.284 0.887 1.8027 0.88132 12 8 8 12 0.6667 0.6667 1.0000 R 3 ...AGGmGGCs. YGGCGGCG 42 29 14 22 47 40 46 34.2857 41
dyads_test_vs_ctrl_m4 11601_PK19363.1_M0004_1.02_CISBP_1.02_ dyads_test_vs_ctrl_m4 11601_PK19363.1_M0004_1.02_CISBP_1.02_ 0.757 0.505 2.923 0.261 0.896 1.6699 0.88578 12 8 8 12 0.6667 0.6667 1.0000 R 3 ...AGGmGGCs. YGGCGGCG 47 34 24 26 42 31 37 34.4286 42
dyads_test_vs_ctrl_m4 10963_ERF5_M0039_1.02_CISBP_1.02_ dyads_test_vs_ctrl_m4 10963_ERF5_M0039_1.02_CISBP_1.02_ 0.767 0.531 0.162 -0.143 0.917 1.4882 0.90416 12 10 9 13 0.6923 0.7500 0.9000 R 3 ...AGGmGGCsg KGGCGGCKS. 43 25 52 47 28 24 25 34.8571 43
oligos_5-7nt_m4 11940_XM_002867953.1_M1653_1.02_CISBP_1.02_ oligos_5-7nt_m4 11940_XM_002867953.1_M1653_1.02_CISBP_1.02_ 0.771 0.441 6.700 0.428 0.867 2.1237 0.87119 14 8 8 14 0.5714 0.5714 1.0000 D 4 ....GGGCCCAT.. GGsmCCAC 40 46 4 14 49 45 49 35.2857 44
dyads_test_vs_ctrl_m4 10962_ERF3_M0011_1.02_CISBP_1.02_ dyads_test_vs_ctrl_m4 10962_ERF3_M0011_1.02_CISBP_1.02_ 0.761 0.507 3.404 0.266 0.888 1.7870 0.88184 12 8 8 12 0.6667 0.6667 1.0000 R 3 ...AGGmGGCs. YGGCGGCG 45 33 21 25 45 38 44 35.8571 45
dyads_test_vs_ctrl_m3 5014_E2Fa_Athamap_20091028__E2Fe_Athamap_20091028_ dyads_test_vs_ctrl_m3 5014_E2Fa_Athamap_20091028__E2Fe_Athamap_20091028_ 0.778 0.415 6.644 0.429 0.863 2.1974 0.86898 15 8 8 15 0.5333 0.5333 1.0000 D 2 ..ctTCCAGC..... wTTCCCGC 36 51 5 12 50 47 50 35.8571 46
dyads_test_vs_ctrl_m4 10649_AT2G33710_M0018_1.02_CISBP_1.02_ dyads_test_vs_ctrl_m4 10649_AT2G33710_M0018_1.02_CISBP_1.02_ 0.762 0.528 0.278 -0.143 0.913 1.5712 0.90152 12 10 9 13 0.6923 0.7500 0.9000 R 3 ...AGGmGGCsg TGGCGGCGS. 44 26 49 48 30 28 27 36.0000 47
oligos_5-7nt_m4 11944_XM_002893560.1_M1651_1.02_CISBP_1.02_ oligos_5-7nt_m4 11944_XM_002893560.1_M1651_1.02_CISBP_1.02_ 0.756 0.540 0.668 0.573 0.878 2.4488 0.88935 14 10 10 14 0.7143 0.7143 1.0000 D 2 ..ATGGGCCCAT.. rtkkbvmmay 48 21 42 3 40 52 48 36.2857 48
dyads_test_vs_ctrl_m3 5015_E2Fb_Athamap_20091028_ dyads_test_vs_ctrl_m3 5015_E2Fb_Athamap_20091028_ 0.768 0.410 6.640 0.425 0.856 2.3048 0.86581 15 8 8 15 0.5333 0.5333 1.0000 D 2 ..ctTCCAGC..... WTTCCCGC 41 52 6 16 52 51 52 38.5714 49
dyads_test_vs_ctrl_m4 7221_ERF1_ArabidopsisPBM_20140210_ dyads_test_vs_ctrl_m4 7221_ERF1_ArabidopsisPBM_20140210_ 0.774 0.536 0.373 -0.115 0.894 1.9002 0.89170 12 10 9 13 0.6923 0.7500 0.9000 R 3 ...AGGmGGCsg TGGCGGCGS. 39 23 46 41 39 42 40 38.5714 50
dyads_test_vs_ctrl_m4 4995_ABI4_Athamap_20091028_ dyads_test_vs_ctrl_m4 4995_ABI4_Athamap_20091028_ 0.751 0.429 2.548 0.138 0.888 1.7877 0.88182 12 10 8 14 0.5714 0.6667 0.8000 R 4 ....GGmGGCsg SGGGGCGG.. 50 49 26 32 46 39 45 41.0000 51
oligos_5-7nt_m4 11937_XM_002865836.1_M1654_1.02_CISBP_1.02__XM_002876964.1_M1652_1.02_CISBP_1.02_ oligos_5-7nt_m4 11937_XM_002865836.1_M1654_1.02_CISBP_1.02__XM_002876964.1_M1652_1.02_CISBP_1.02_ 0.752 0.430 1.956 0.033 0.857 2.2894 0.86626 14 8 8 14 0.5714 0.5714 1.0000 R 2 ..ATGGGCCC.... GTGGGSYC 49 48 30 33 51 50 51 44.5714 52 
 Host name	baobab.eead.csic.es
 Job started	2015-11-24.141859
 Job done	2015-11-24.142033
 Seconds	70.25
	user	70.25
	system	4.49
	cuser	14.82
;	csystem	4.09