The raw contigs FASTA file, the GTF annotations and the peptide sequences were downloaded from: ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/010/261/695/GCA_010261695.1_La_Amiga3.1 The hard-masked FASTA file was produced by Perl conversion of the soft-masked sequences from NCBI with the following: perl -lne 'if(!/^>/){ s/[a-z]/N/g } print' \ Lupinus_albus.La_Amiga31.GCA_010261695.1.NCBI.dna.toplevel.fa > \ Lupinus_albus.La_Amiga31.GCA_010261695.1.NCBI.dna_rm.genome.fa The rest of files were produced by RSAT-Tools to install this genome.