; convert-matrix  -v 1 -i D2/regulonD2.rm.fna.peaks-rm/results/oligos_5-7nt/peaks_oligos-2str-noov_5-7nt_mvk2_2_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o D2/regulonD2.rm.fna.peaks-rm/results/oligos_5-7nt/peaks_oligos-2str-noov_5-7nt_mvk2_2_pssm_count_matrices.txt
; Input files
;	input	D2/regulonD2.rm.fna.peaks-rm/results/oligos_5-7nt/peaks_oligos-2str-noov_5-7nt_mvk2_2_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	D2/regulonD2.rm.fna.peaks-rm/results/oligos_5-7nt/peaks_oligos-2str-noov_5-7nt_mvk2_2_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	0	2	0	1	0	1	0	0	1	5	0	4	5	1	4	0	5	0	1	1
c	2	1	0	1	1	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1
g	0	1	0	2	1	4	0	5	4	0	0	1	0	3	1	0	0	1	3	1
t	3	1	5	1	3	0	5	0	0	0	5	0	0	1	0	4	0	4	0	2
//
; Sites	5
>site_0
CATCGGTGGATAAGATATGC
>site_1
TTTATATGAATAAAATATGG
>site_2
CGTTTGTGGATAATATAGCA
>site_3
TATGTGTGGATAAGGCATGT
>site_4
TCTGCGTGGATGAGATATAT
a	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	2	1	1
c	1	0	0	2	0	0	1	0	0	0	2	2	2	0	2	0	0	0	1	0
g	0	1	0	0	0	2	0	2	2	2	0	0	0	1	0	0	2	0	0	1
t	1	1	2	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
//
; Sites	2
>site_0
CTTCTGCGGGCCCACAGACA
>site_1
TGTCTGTGGGCCCGCAGAAG
a	4	2	0	1	1	0	13	1	0	1	13	0	14	0	13	4	5
c	5	2	13	15	1	1	1	2	14	14	1	14	0	16	2	8	3
g	4	7	2	0	1	1	1	1	1	1	2	1	1	0	1	0	6
t	3	5	1	0	13	14	1	12	1	0	0	1	1	0	0	4	2
//
; Sites	16
>site_0
GGCCTTATCGGCACACG
>site_1
GACCTTACCCACACCAA
>site_2
ATCCTTATTCACACGTT
>site_3
AGGCTTATGCACACATG
>site_4
AGCCTTATCCATGCACG
>site_5
CGCCTTATCCCGACACT
>site_6
CCCATCATCCACACAAA
>site_7
GGCCTTATCCGCACCCG
>site_8
CTCCTTTCCCACACACC
>site_9
GTGCTTATCAACACACG
>site_10
AACCTTGGCCACACAAC
>site_11
TTCCATAACCACACAAA
>site_12
CCCCGTATCCACTCATC
>site_13
TGCCTTATCCACACATA
>site_14
TTTCTTCTCCACACACA
>site_15
CGCCCGATCCACACACG
a	19	27	18	6	79	1	0	4	89	2	7	5	6	27	22
c	39	34	37	87	7	0	97	95	4	84	3	4	91	35	30
g	28	28	34	7	12	96	4	1	4	0	91	86	1	28	25
t	15	12	12	1	3	4	0	1	4	15	0	6	3	11	24
//
; Sites	101
>site_0
CCACAGCCACAGCTT
>site_1
AGTCTGCCACGGCAG
>site_2
GAGGAGCCACGGCCG
>site_3
GTCCAGCCACAGCCC
>site_4
CAACAACCACGGCCG
>site_5
CATCAGCCATGGCCA
>site_6
TGACATCCACGGCAT
>site_7
GCGCTGCCACGGCAA
>site_8
CGGCAGCCACGTCCA
>site_9
TCCAAGCCACGGTAC
>site_10
TAGCAGCCATGGCTT
>site_11
AAGCAGGCACGGCTT
>site_12
CATCAGCCACGTCGG
>site_13
CCTCCGCCACGGCGT
>site_14
GAGCATCCACGGCCG
>site_15
AAACAGCCACGGAGA
>site_16
ATCGAGCCACGGCAT
>site_17
AGCAAGCCACGTCGT
>site_18
AATCAGCCACGGACA
>site_19
CCGCAGCCACCGCCG
>site_20
AGCCAGCCATGGCTC
>site_21
CAGCAGCCATGGCAG
>site_22
GACTAGCCACGACGA
>site_23
GAACATCCACGGCCC
>site_24
TCCCGGCCACGCCAC
>site_25
CAGCAGCCAAGGCTC
>site_26
GCGCAGCCACGCCAC
>site_27
AGGCGGCCACGGCGC
>site_28
GGCCCGCCACGGGAC
>site_29
AGTCAGCCATGGCAT
>site_30
GCGCAGCCAAGGCCA
>site_31
CGCGAGCCACGTCAA
>site_32
CTCCTGCCACGGCCC
>site_33
CTCCCGCCACGGTAC
>site_34
GACGAGCCACGGAGC
>site_35
CCACAGCAACGGCTG
>site_36
GCACAGGCACGGCCT
>site_37
GCACAGCCCCGGCTT
>site_38
CGCCCGCCACGGCCG
>site_39
CCGCAGCCGCGGCGC
>site_40
ATGCAGCCCCGGCAA
>site_41
CGCCAGCCTCGGCAC
>site_42
GCCAAGCCACGGCCC
>site_43
CTCCAGCCATGGCCA
>site_44
CCACAGCCTCGGCCC
>site_45
CAACAGCCACGCCGA
>site_46
GCCCAGGCACGGCAC
>site_47
GGGCAGCAACGGCGT
>site_48
CTTCAGCCACGGAAA
>site_49
GTGCAGCCTCGGCCA
>site_50
ACCCAGCCACAGCCC
>site_51
CCACGGCCACGGCGT
>site_52
TGCCAGCCCCGGCCC
>site_53
CAGCAGCAACGGCGA
>site_54
GCGCAGCCATGGCGC
>site_55
TCACAGCCGCGGCGG
>site_56
TTACCGCCACGGCAG
>site_57
TGCAAGCCACGACCC
>site_58
AAGCATCCACGGCGT
>site_59
CCCCAGCCGCGGCCG
>site_60
CGGCAGCCACAGCCC
>site_61
AGCCAGCCATGGCGT
>site_62
TGGCAGCCACAGCAG
>site_63
GACCAGCCACGAACC
>site_64
AGGCAGGCACGGCAA
>site_65
GTCGAGCCACGGCAG
>site_66
TCCCGGCCACGGCAG
>site_67
ACCCGGCCACGCCGC
>site_68
CGTCAGCCCCGGCAT
>site_69
CTTCCGCCACGGCGC
>site_70
GCTCAGCCATGGCAT
>site_71
GACAAGCCACGACCC
>site_72
CCGCAGCCGCGGCCT
>site_73
CCGCAGCCATGGCGT
>site_74
TACAAGCCACGGTCT
>site_75
TACCAGCCACAGCCT
>site_76
GGGCCGCCACGGCGC
>site_77
CGGCGGCCACGGCTT
>site_78
CCCCAGCCACGACGC
>site_79
CACGAGCCACGTCAT
>site_80
CAGCAGCGACGGCGA
>site_81
TCACGGCCACGGCCG
>site_82
CCCCGGCCACGGCCA
>site_83
CCACGGCCACGGCGA
>site_84
CCACGGCCACGGCCA
>site_85
CAGCAGCCACGTCCG
>site_86
GCCCGGCCACGGCTT
>site_87
TGGCAGCCACGGCGA
>site_88
ACCCAGCCACCGCGG
>site_89
GACGAGCCACGGAGC
>site_90
AGCCAGCCATGGCCG
>site_91
CGGCAGCCTCGGCCT
>site_92
GGGCAGCCATGGCGA
>site_93
GCGCAGCCATGGCCG
>site_94
AGCCAGCCATGGCCG
>site_95
GATCAGCAACGGCTG
>site_96
CGGCAGCCACCGCAA
>site_97
CTACAGCCACAGCAG
>site_98
GAACGGCCACGGCTG
>site_99
AGGCAGCCATGGCGG
>site_100
TCTCAGCTACGGCAC
a	33	46	59	4	125	1	8	139	7	135	9	111	39	43
c	52	41	31	123	4	135	124	0	132	2	118	14	42	42
g	27	25	33	7	2	2	6	1	0	1	8	11	19	35
t	29	29	18	7	10	3	3	1	2	3	6	5	41	21
//
; Sites	141
>site_0
TAGCACAACACAGG
>site_1
TACCATCACACATG
>site_2
CTACACCACCCAGA
>site_3
CTCCACCACACACG
>site_4
GCACACAACACAAC
>site_5
CAACACAACACAGG
>site_6
GCACACCACAAACG
>site_7
CAACACCGCACAAA
>site_8
CGTCACCACTCACC
>site_9
TTACACCACAGATC
>site_10
ACACACCAAACATC
>site_11
GAGCACCACACACA
>site_12
TCCCACCACACGCC
>site_13
ACGCATCACACACT
>site_14
ACACACTACACATC
>site_15
CTCCACCACACAGT
>site_16
CAACCCCACACACT
>site_17
CGGCACCACAGAAA
>site_18
AAACACCAAACATG
>site_19
CGCCACCACACCCG
>site_20
TACCCCCACACATG
>site_21
AAAAACCACACAAA
>site_22
CACCACCACATAGC
>site_23
CCACTCCACACACC
>site_24
TAACACCACACATA
>site_25
ACGCACCACACCTC
>site_26
CAGCTCCACACACA
>site_27
CAACACCACACCCC
>site_28
GACGACCACACACC
>site_29
CAGCACCACACGGA
>site_30
GCTCACCACACATG
>site_31
GGTCACCACACGAC
>site_32
ATGCACGACACACA
>site_33
GACCAGCACACACA
>site_34
ATACACCACACTTG
>site_35
CACCACCACACATG
>site_36
ATCCACCACACATT
>site_37
CCACGCCACACAGC
>site_38
CAACACCAAACAAC
>site_39
GCTCACCACAAATA
>site_40
CTCCACCACACAAA
>site_41
TCTCACGACACAGA
>site_42
CCCCACTACACACA
>site_43
AACCACCACAAATA
>site_44
CGGCACTACACAAG
>site_45
TGACACCACAAAAT
>site_46
TTGTACCACACAAA
>site_47
CTCCACCACAAACC
>site_48
GCCCACCACACCTC
>site_49
CTCCACCACACGCT
>site_50
ATACACCACACATA
>site_51
AAACACCACACGCA
>site_52
ACACACCACGCAAC
>site_53
TCGCACCACAAATC
>site_54
GTGCCCCACACATC
>site_55
ACGGACCACACAAC
>site_56
CCACACAACACAAG
>site_57
TGACACCACAGAGA
>site_58
CTGCTCCACACATA
>site_59
AAACACCACATACT
>site_60
CCGCACCACAAACC
>site_61
TGGCACCACAAAAA
>site_62
AAGTACCACACATC
>site_63
CACCACCACATACA
>site_64
CAGCACCACAGAAA
>site_65
ATACACGACACAAG
>site_66
GGACACCACAGATC
>site_67
TTCCACCACACAAA
>site_68
TGACACCACACCGC
>site_69
GGTCACCACTCACC
>site_70
CCACACCACACGAC
>site_71
GCGCACCACACCGC
>site_72
GCGCACCACACGCT
>site_73
TAACACCATACACC
>site_74
ACCCACCACATAGG
>site_75
TAACACCACACGTT
>site_76
GAAAACCACACATT
>site_77
CTTCACCACAAAGT
>site_78
CCACTCCACACAGT
>site_79
GAAGACCACACATC
>site_80
TCGCCCCACACAAC
>site_81
CCACAGCACACACC
>site_82
CAACAACACACATT
>site_83
CAGCACCACACGAC
>site_84
AGTCACGACACAGT
>site_85
CAACACCACCCATA
>site_86
TCTCACCACACACG
>site_87
AACCACCACACCAC
>site_88
GAACACCAAACAAG
>site_89
CACCACCACAGACA
>site_90
CGCCACCACACCAA
>site_91
CCACACCACACGCT
>site_92
CCGCACCACACCAC
>site_93
ACACACCACTCAGT
>site_94
GGAAACCACACACC
>site_95
ATCCACCACACTTG
>site_96
ATGCTCCACACACG
>site_97
CCACACCACACTAT
>site_98
CTCCTCCACACATG
>site_99
ACACACCACACGAG
>site_100
AATCACCACACCAC
>site_101
ACTCACCACACACA
>site_102
TCGCATCACACATA
>site_103
GAGCACCACAGATT
>site_104
TAACACAACACAGA
>site_105
CATCACCACACCTA
>site_106
TGACACCAAACACC
>site_107
TTTCTCCACACACA
>site_108
TGCTACCACACATG
>site_109
GAAGACCACACACG
>site_110
CCGCACCACACAAG
>site_111
CGCCGCCACACACA
>site_112
TGGTACCACACAAG
>site_113
CATAACCACACAAA
>site_114
GGTCACCACAGAGG
>site_115
AGAGACCACACAAA
>site_116
TATCACAACACAAC
>site_117
GTTTACCACACATA
>site_118
GGCCACCACACTTC
>site_119
CTGCACCACACCTC
>site_120
GCACACCACATATA
>site_121
GCGTACCACACACA
>site_122
CAACACAACACACG
>site_123
CCACACCACACCAA
>site_124
AGCCACCACACCAC
>site_125
AGAGACCACACAAG
>site_126
ACGCTCCACACATG
>site_127
CTGGACCACACAAG
>site_128
ATCCTCCACACACT
>site_129
TAATACCACACATA
>site_130
CTGCACCACACAAG
>site_131
TAACACCAAACAAG
>site_132
CTCCACCTCACACT
>site_133
GGACACGACACATG
>site_134
GGACACGACACATG
>site_135
ACACACCACACTAT
>site_136
ATACACCATACACA
>site_137
CTTCTCCACACACA
>site_138
TCACACCAAACACA
>site_139
TAACACAACACAGG
>site_140
CAACACCACATATC
; Host name	baobab.eead.csic.es
; Job started	2021-02-25.191825
; Job done	2021-02-25.191825
; Seconds	0.18
;	user	0.18
;	system	0.02
;	cuser	0
;	csystem	0