; convert-matrix  -v 1 -i D6/regulonD6.rm.fna.peaks-rm/results/oligos_5-7nt/peaks_oligos-2str-noov_5-7nt_mvk2_2_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o D6/regulonD6.rm.fna.peaks-rm/results/oligos_5-7nt/peaks_oligos-2str-noov_5-7nt_mvk2_2_pssm_count_matrices.txt
; Input files
;	input	D6/regulonD6.rm.fna.peaks-rm/results/oligos_5-7nt/peaks_oligos-2str-noov_5-7nt_mvk2_2_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	D6/regulonD6.rm.fna.peaks-rm/results/oligos_5-7nt/peaks_oligos-2str-noov_5-7nt_mvk2_2_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	27	21	0	72	0	72	0	72	22	17
c	19	12	72	0	72	0	72	0	21	22
g	8	23	0	0	0	0	0	0	16	24
t	18	16	0	0	0	0	0	0	13	9
//
; Sites	72
>site_0
GCCACACACA
>site_1
CACACACACA
>site_2
CACACACAGC
>site_3
CTCACACAGA
>site_4
ACCACACAAG
>site_5
GACACACACA
>site_6
CACACACACG
>site_7
AGCACACAGT
>site_8
AGCACACACC
>site_9
AGCACACAGA
>site_10
AACACACATG
>site_11
ATCACACAAA
>site_12
TACACACACT
>site_13
AACACACAGC
>site_14
GGCACACATT
>site_15
AGCACACATG
>site_16
TGCACACAAA
>site_17
AGCACACAAG
>site_18
TGCACACACG
>site_19
AACACACAGC
>site_20
CTCACACAAC
>site_21
TGCACACAAG
>site_22
ACCACACAAA
>site_23
ATCACACACC
>site_24
TGCACACACG
>site_25
ATCACACATT
>site_26
TCCACACAAG
>site_27
TTCACACAAT
>site_28
AACACACATG
>site_29
GGCACACAAC
>site_30
CCCACACACT
>site_31
AACACACAGG
>site_32
TCCACACAAC
>site_33
GTCACACATG
>site_34
TGCACACAAG
>site_35
GCCACACACG
>site_36
AGCACACATA
>site_37
TTCACACACG
>site_38
AACACACAGT
>site_39
TGCACACAGG
>site_40
TCCACACAAC
>site_41
AACACACAAG
>site_42
GACACACAGC
>site_43
AGCACACATC
>site_44
AACACACATT
>site_45
AGCACACAAG
>site_46
AGCACACAAA
>site_47
CTCACACAAC
>site_48
ACCACACACC
>site_49
TACACACATT
>site_50
TGCACACACA
>site_51
CACACACAGC
>site_52
TGCACACAAG
>site_53
TGCACACAAG
>site_54
CTCACACATC
>site_55
TCCACACAAG
>site_56
CTCACACAGG
>site_57
AGCACACAAC
>site_58
GGCACACACG
>site_59
CGCACACAAA
>site_60
CTCACACACA
>site_61
CACACACACA
>site_62
CACACACATG
>site_63
CTCACACACA
>site_64
CACACACAGC
>site_65
CCCACACAGC
>site_66
TTCACACATC
>site_67
AACACACACA
>site_68
CACACACAGA
>site_69
ACCACACACC
>site_70
CTCACACAGC
>site_71
ATCACACACC
a	10	13	0	0	44	0	0	44	7	13
c	10	5	44	0	0	44	0	0	14	10
g	7	12	0	0	0	0	0	0	14	7
t	17	14	0	44	0	0	44	0	9	14
//
; Sites	44
>site_0
TACTACTAAT
>site_1
GCCTACTACA
>site_2
GACTACTAGC
>site_3
CTCTACTATA
>site_4
CTCTACTAGT
>site_5
CACTACTACA
>site_6
TTCTACTATA
>site_7
ATCTACTAAT
>site_8
TACTACTACG
>site_9
TCCTACTATT
>site_10
CTCTACTACC
>site_11
GTCTACTACC
>site_12
AGCTACTATA
>site_13
ACCTACTAAT
>site_14
AACTACTATT
>site_15
AGCTACTAAA
>site_16
CGCTACTAGG
>site_17
TACTACTACA
>site_18
CGCTACTAGC
>site_19
TACTACTAGT
>site_20
AGCTACTACT
>site_21
TTCTACTAGA
>site_22
TACTACTAGC
>site_23
TGCTACTACT
>site_24
TACTACTATA
>site_25
GCCTACTACG
>site_26
ATCTACTATT
>site_27
CTCTACTAGG
>site_28
CTCTACTACG
>site_29
GGCTACTAGC
>site_30
GCCTACTATC
>site_31
TTCTACTAGA
>site_32
TACTACTACG
>site_33
AGCTACTAGC
>site_34
ATCTACTACG
>site_35
GACTACTAGT
>site_36
TTCTACTAAT
>site_37
TGCTACTAGC
>site_38
CACTACTACT
>site_39
ATCTACTAGT
>site_40
TGCTACTAAC
>site_41
TACTACTATA
>site_42
CGCTACTACA
>site_43
TGCTACTAAA
a	10	9	2	0	26	0	0	4	0	24	12	4
c	9	5	3	29	1	31	0	0	1	2	6	8
g	8	6	2	2	0	0	31	1	30	3	4	9
t	4	11	24	0	4	0	0	26	0	2	9	10
//
; Sites	31
>site_0
GATGACGTGACT
>site_1
AGTCACGTCATC
>site_2
ATCCACGTGACA
>site_3
TGTCACGTGGAT
>site_4
GTCCACGTGAAG
>site_5
CTTCACGTGGAC
>site_6
AATCACGTGACT
>site_7
AGTCACGTGATT
>site_8
GATCACGTGAAA
>site_9
TTTCACGTGATC
>site_10
ATTCACGAGAAC
>site_11
GTTCTCGTGAAT
>site_12
TATCTCGTGAAT
>site_13
ATTCACGAGATA
>site_14
CTCCACGTGAGT
>site_15
ACTCACGTGGAG
>site_16
ACTGACGTGAAT
>site_17
GCTCACGTGCTG
>site_18
CAGCACGTGAGC
>site_19
ACTCACGGGACT
>site_20
AGTCCCGTGAGT
>site_21
CCTCACGTGTTC
>site_22
GAACACGTGAGG
>site_23
CAACACGTGACA
>site_24
TGTCACGTGTTG
>site_25
GAGCACGTGAAG
>site_26
CTTCACGTGCTC
>site_27
CTTCACGAGACG
>site_28
CGTCTCGTGAAG
>site_29
GATCACGAGAAG
>site_30
CTTCTCGTGATC
a	7	5	0	0	15	0	0	15	0	5	5
c	4	5	0	15	0	15	0	0	0	7	5
g	2	2	0	0	0	0	15	0	14	0	1
t	2	3	15	0	0	0	0	0	1	3	4
//
; Sites	15
>site_0
ACTCACGATAC
>site_1
TATCACGAGCA
>site_2
ACTCACGAGTT
>site_3
ATTCACGAGAA
>site_4
ACTCACGAGCA
>site_5
TCTCACGAGTC
>site_6
AGTCACGAGCC
>site_7
ATTCACGAGAT
>site_8
AGTCACGAGCC
>site_9
GATCACGAGCT
>site_10
CCTCACGAGCT
>site_11
CATCACGAGCA
>site_12
CATCACGAGTG
>site_13
CTTCACGAGAC
>site_14
GATCACGAGAA
a	12	18	8	0	44	0	1	46	2	38	15	9
c	8	7	32	0	3	46	0	1	39	2	10	14
g	6	9	6	0	0	0	0	1	2	5	12	18
t	22	14	2	48	1	2	47	0	5	3	11	7
//
; Sites	48
>site_0
AGATACTACACG
>site_1
TACTACTCCATG
>site_2
GTCTATTACATG
>site_3
GCCTACTACAGG
>site_4
GTGTACTACAGC
>site_5
CTCTACTATAAT
>site_6
AGGTACTACAAA
>site_7
TGATACTACACG
>site_8
CACTACTACATG
>site_9
TTCTACTATACA
>site_10
CCGTACTACACT
>site_11
ATATACTACATG
>site_12
ATCTATTACACG
>site_13
TAGTACTACAGC
>site_14
TACTACTACGTG
>site_15
CTCTACTACCAT
>site_16
TACTCCTACAAT
>site_17
GTCTACTACCTT
>site_18
AGCTACTATACC
>site_19
AGCTACTAAAAC
>site_20
TACTTCTACAAG
>site_21
TACTACTACATC
>site_22
TATTACTACACA
>site_23
AGCTACTACTGC
>site_24
TACTACTGCATG
>site_25
TTCTACTAGAAA
>site_26
TGCTACTACTAG
>site_27
TACTACTATACC
>site_28
GCCTACTACGGA
>site_29
ACATACTACAAT
>site_30
AAATACTACATG
>site_31
CTCTACTACGCA
>site_32
TTCTACTAGAAC
>site_33
TACTACTACGTA
>site_34
GTCTCCTACAAC
>site_35
CAATACTACAGC
>site_36
ACGTACTACACG
>site_37
ATCTACTACGGC
>site_38
TTTTACTACAGA
>site_39
CACTACTACTGG
>site_40
ACATACTACAGT
>site_41
TACTACTATATG
>site_42
TAGTACTACAAG
>site_43
TCCTCCTACAGG
>site_44
TAATACTACAAC
>site_45
TACTACAACAGC
>site_46
CGCTACTACAAA
>site_47
TGCTACTAAAAC
; Host name	baobab.eead.csic.es
; Job started	2021-02-25.191834
; Job done	2021-02-25.191834
; Seconds	0.17
;	user	0.17
;	system	0.02
;	cuser	0
;	csystem	0