; convert-matrix  -v 1 -i D8/regulonD8.rm.fna.peaks-rm/results/dyads_test_vs_ctrl/peaks_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o D8/regulonD8.rm.fna.peaks-rm/results/dyads_test_vs_ctrl/peaks_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.txt
; Input files
;	input	D8/regulonD8.rm.fna.peaks-rm/results/dyads_test_vs_ctrl/peaks_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	D8/regulonD8.rm.fna.peaks-rm/results/dyads_test_vs_ctrl/peaks_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	0	1	1	0	1	1	1	0	1	0	1	1	1	0	1	0	0	0	1	0	1
c	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
g	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	1	0	0	0	0
t	1	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	1	0	1	0
//
; Sites	1
>site_0
TAACAAATAGAAATAGGTATA
a	6	7	12	10	3	13	13	0	14	6	9	7	12	14	11	4	5	4
c	4	1	0	0	1	1	1	0	0	1	1	0	0	0	0	0	1	5
g	2	4	1	4	10	0	0	1	0	5	3	4	1	0	3	7	4	1
t	2	2	1	0	0	0	0	13	0	2	1	3	1	0	0	3	4	4
//
; Sites	14
>site_0
AAAACACTAGGAAAAGCC
>site_1
CTAGGAATATGGAAAATT
>site_2
TAAAAAATAGAATAAGGA
>site_3
CAGAGCATAGAAAAAGGC
>site_4
TAAAAAATAGAGAAATAA
>site_5
AGAAGAATAAAAGAATAA
>site_6
AAAAGAATAAATAAGTAG
>site_7
AGAAGAATAAAGAAGAAT
>site_8
GAAAGAATAATAAAAAGC
>site_9
AATGGAATAAATAAAGAA
>site_10
AGAGGAATACATAAAGTT
>site_11
CTAGGAATATGGAAAATT
>site_12
GCAAAAATAGAAAAGGTC
>site_13
CGAAGAAGAACAAAAGGC
a	15	14	28	1	29	25	26	6	23	15	13	13	23	27	2	3	5	8
c	8	8	0	1	0	2	3	0	0	5	3	6	1	0	0	2	11	9
g	3	1	1	2	1	1	0	9	3	8	7	5	1	3	0	0	7	8
t	4	7	1	26	0	2	1	15	4	2	7	6	5	0	28	25	7	5
//
; Sites	30
>site_0
AAATAAATTAAATATTTG
>site_1
TCAAAAATTAAGAATTCC
>site_2
TGTTGAATAGACAATTGA
>site_3
CAATAAAAATAAAATTCA
>site_4
ATATACATACACTATTGG
>site_5
AAATAAAGAGTAAATCCG
>site_6
TCGTAAATAACCAATTTT
>site_7
TCATAATTGGTAAATTTG
>site_8
CCATACATAACGAATTGG
>site_9
GAATAAATAGAATAATGA
>site_10
CTACAAAGTAGGAATTCA
>site_11
ACATAAATAAGAAGTTGT
>site_12
AAATAGAGAAATAATTAA
>site_13
CAATAACGACAAAATTTT
>site_14
ATAGAAATAGTTAATTTG
>site_15
AAATAAAGAAGCCATTGC
>site_16
AAATAAAAAGAAAGTTCA
>site_17
AAATAAAGACTAAATCCC
>site_18
CCATAAATAGGTTATTCC
>site_19
ATATATATATACAATATG
>site_20
GAATAAATAAAGAATAAA
>site_21
AAATAACAAATTAATTCT
>site_22
AAATAACAAATTAATTCT
>site_23
ATATAAAATATTAATTCC
>site_24
GAATAAATAGAATAATGA
>site_25
AAATAAAGGCCCAGTTAC
>site_26
CCATAAAGAAGAAATAAG
>site_27
CTATAAAAGAAAGATTAC
>site_28
CCATATAGACGAAATTTC
>site_29
ATAGAAATAAGGAATTCC
a	4	4	12	12	1	7	2	7	6	5	7	7	5	4	9	2	1	2	5	3	0	1	5	4
c	4	1	1	1	0	1	1	0	0	1	1	0	1	0	0	1	0	1	4	0	0	11	3	2
g	3	6	1	0	0	2	7	3	4	3	2	1	0	0	0	0	0	2	3	0	3	0	0	0
t	3	3	0	1	13	4	4	4	4	5	4	6	8	10	5	11	13	9	2	11	11	2	6	8
//
; Sites	14
>site_0
CAAATATTTAATTTATTTAATTAA
>site_1
TGAATAGAAAGTTAAATGATTCCA
>site_2
GGAATGAAATAAATATTCATGCTT
>site_3
AGAATTCGAGTTCTTATTGTTCTT
>site_4
GACATTAAAAGTATATTGATTCTT
>site_5
ATAATCGATGAGTTATATCTTCTT
>site_6
AGAATTTAGGCATTATTTTTTCCC
>site_7
TGAAAAGGGTAAAAATTTCTTCAT
>site_8
CTAATGGATTTTATTCTTCTTCTT
>site_9
CAAATTGTATAATATTTACTGAAC
>site_10
TTAATATGGCATTATTTTTAGCTA
>site_11
AGACTAGTATTATTATTTGATCAT
>site_12
GAATTAGTGATATTTTTTGTTTAT
>site_13
CCGATATATAAAATATTAATTCCA
a	5	6	21	2	22	2	11	6	8	12	5	7	13	11	9	14	5	18	2	19	23	8	10
c	3	2	0	0	0	5	4	6	2	0	0	0	3	0	1	0	3	3	3	0	0	5	5
g	6	5	1	1	1	3	1	6	2	2	0	0	1	4	0	3	0	1	17	0	0	3	0
t	9	10	1	20	0	13	7	5	11	9	18	16	6	8	13	6	15	1	1	4	0	7	8
//
; Sites	23
>site_0
TCATATAGAATAAGAATAAAAAT
>site_1
ATATATAGTATTCATATAGAATA
>site_2
AAATACGCAGTATTTACAGAAAA
>site_3
CAATATACTTTTAATGTCGAATC
>site_4
CTATATATTTTTCTATTTGAACA
>site_5
CTATATTCTATTTTTAACGTAAT
>site_6
TTTTATTACTTAATTTAAGAATT
>site_7
GAATAAAAGAATAAATAAGTAGA
>site_8
TAAAAGAATAAATAAGTAGAAGA
>site_9
ATATACTTAATTATATCATAAGA
>site_10
GGATATCCTTAAATAAAAGTATA
>site_11
AGAAATAGGTATAGTATAGAAAT
>site_12
GTATATCTTTTATATTTGGTATT
>site_13
TAATGCCATATTAATATACAACA
>site_14
GGAGATTGATTTATTTTAGAACC
>site_15
TAGTAGATTATTAGTATAGAAAC
>site_16
GGATACTCTGTTTACATAGAAAT
>site_17
TTATAGTAAATTAATACACAACC
>site_18
TTATACTAAAATTATGAAGAACA
>site_19
GTATAACTCTTTGTAATAGAAAT
>site_20
TCATATAGAATAAGAATAAAAAT
>site_21
ATATATAGTATTCATATAGAATA
>site_22
TGATATACATTTAAAATCCAATC
; Host name	baobab.eead.csic.es
; Job started	2021-02-16.171858
; Job done	2021-02-16.171858
; Seconds	0.16
;	user	0.17
;	system	0.03
;	cuser	0
;	csystem	0