; convert-matrix  -v 1 -i W1/regulonW1.rm.fna.peaks-rm/results/oligos_5-7nt/peaks_oligos-2str-noov_5-7nt_mvk2_2_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o W1/regulonW1.rm.fna.peaks-rm/results/oligos_5-7nt/peaks_oligos-2str-noov_5-7nt_mvk2_2_pssm_count_matrices.txt
; Input files
;	input	W1/regulonW1.rm.fna.peaks-rm/results/oligos_5-7nt/peaks_oligos-2str-noov_5-7nt_mvk2_2_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	W1/regulonW1.rm.fna.peaks-rm/results/oligos_5-7nt/peaks_oligos-2str-noov_5-7nt_mvk2_2_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	12	8	9	6	1	28	30	31	28	2	1	1	1	26	4	21	13	11
c	2	3	0	21	4	3	1	0	1	1	0	0	0	1	1	2	8	7
g	7	8	2	1	1	0	0	0	1	1	0	1	3	4	21	0	3	2
t	11	13	21	4	26	1	1	1	2	28	31	30	28	1	6	9	8	12
//
; Sites	32
>site_0
TGTCCAAAAATTTAGATC
>site_1
GATCTAAATTTTTGGACA
>site_2
AGTCTACAATTTTAGTCG
>site_3
CGACTAAAATTGTAGACT
>site_4
TATCTAAAATTATATAAA
>site_5
TTTATATAATTTTAGATA
>site_6
TGTTTTAAATTTTAGACT
>site_7
AGTCTAAAATTTAAAACA
>site_8
TTTCTAAAATTTTTGTAT
>site_9
ATACAAAAATTTTAGAAA
>site_10
ACACCAAAATTTTAGTTC
>site_11
GAACTAAAATTTTGGTGT
>site_12
ATTATAAAATTTTATTTA
>site_13
TAAATAAAATTTTATAAT
>site_14
AAACTAAAACTTTATACT
>site_15
AGTATAAAGTTTTAGTTT
>site_16
ATTTTAAAATTTTAGTTC
>site_17
GAACTAAAATTTTAAAAT
>site_18
GAGCTAAAAGTTTACACG
>site_19
CGTGTAAACTTTTAGCTC
>site_20
GAATTAAAATTTTAAAAT
>site_21
ATTTTAAAATTTTAATTC
>site_22
GTGCTAAAATTTTCTAAC
>site_23
GTTAGAAAATTTTAGCAC
>site_24
TTTCCAAAATTTTGGAAT
>site_25
ATTCCAAAATTTTGGAAA
>site_26
TGACTAAAATATTATAGT
>site_27
ACTATAATATTTTAGTCA
>site_28
TTTCTAAAAATTGAGAGT
>site_29
ACTCTCAATTTTTAGAAA
>site_30
TTTCTCAAATTTGAGAAA
>site_31
TTTCTCAAATTTGAGAAA
a	5	6	1	1	0	19	18	17	18	19	1	2	1	1	17	5	13	6	18
c	5	5	1	16	1	1	2	2	1	1	0	0	0	4	1	1	2	3	2
g	4	2	2	2	0	0	0	0	0	1	0	0	1	1	0	13	0	6	0
t	7	8	17	2	20	1	1	2	2	0	20	19	19	15	3	2	6	6	1
//
; Sites	21
>site_0
GAACTAAAAATTTAAAATA
>site_1
GTGCTATAAATTTTATAGA
>site_2
CTTGTAAAAATTTCAGTCA
>site_3
CTTGTAAAAATTTCAGTCA
>site_4
CATCTAACCATTTTAGAAT
>site_5
TTCCTAAAAATATTAAAAA
>site_6
TCGCTAAAAATTATAAAAA
>site_7
ATTCTAATAATTTTAAAGA
>site_8
ATTTTAAAAATTGTACATA
>site_9
AATACAAAAATTTTAGAAA
>site_10
ACTCTAACAATTTTTGTCA
>site_11
ATTCTACTAATTTTAGTGA
>site_12
CATTTTAAAATTTTAGTTC
>site_13
TATCTAAAAATTTGTGATA
>site_14
TCTCTAAATGTTTTAGAGA
>site_15
TCTCTAAAACATTTAGAGA
>site_16
TGTCTCAAAATTTCAGATA
>site_17
GCTCTAAAAATATTTGCTA
>site_18
CGTCTACAAATTTTCGTGA
>site_19
TATCTAAATATTTTATAAA
>site_20
GTTCTAAAAATTTCAACAC
a	9	6	2	3	0	0	0	0	1	1	0	2	9	6	8	8
c	28	24	50	1	59	52	53	56	0	59	57	7	12	39	19	32
g	7	11	4	0	0	4	0	3	2	0	0	49	3	8	11	14
t	16	19	4	56	1	4	7	1	57	0	3	2	36	7	22	6
//
; Sites	60
>site_0
CTCTCGCCTCCGTTTC
>site_1
CGCTCCCTTCCGTAGC
>site_2
CTCTCGCCTCCGTGAG
>site_3
CCCTCCCCTACGACGC
>site_4
TTCTCCTCTCCGTCCG
>site_5
TTCTCCCCTCCCTTCC
>site_6
AACTCCCCTCCGAAAC
>site_7
CCCTCCCCTCCCTTCA
>site_8
TTTTCCCCTCCGGCTA
>site_9
CTCTCCCCGCCGTCGC
>site_10
GGCTCCTCTCCGTCGC
>site_11
CGCTCCTCTCCGACTC
>site_12
CTCTCCCCTCCGCAAC
>site_13
CACTCCCCTCCGACGA
>site_14
TCCTCCCCTCTGTTCT
>site_15
CGTTCCCCTCCGGCCC
>site_16
CTCTCTCCTCCGTGCC
>site_17
CTCTCCCCTCCTTGCC
>site_18
TCCTCCCCTCCGTCTC
>site_19
CAGTCCCCTCCATCAC
>site_20
TTCCCCCCTCCGTCTC
>site_21
CACTCCTCTCCGCCGG
>site_22
GGTTCCCCTCCGTTTC
>site_23
TTCTCCCCTCCGGCGG
>site_24
TCCTCCCCTCCGCCCT
>site_25
CCCTCCCCTCCCTATG
>site_26
TTGTCCCCTCCGCCTC
>site_27
TCGTCCCCTCCGCCAG
>site_28
CTCTCCCCTCCGCAGA
>site_29
TCCTCGCCTCCGTCCT
>site_30
CCCTCCCCTCCAACTA
>site_31
CTATTCCCTCCGTCAC
>site_32
TCCTCCCCTCCGCCAC
>site_33
GGCTCCTCTCCGACCG
>site_34
CACTCGCCTCCGACCG
>site_35
ACCTCCCCTCCGACCC
>site_36
CTCTCCCCACCGTTCC
>site_37
CTCTCCCCTCCGACTC
>site_38
ACTACCCCTCCGTCTC
>site_39
GCCTCCCCTCCCTCCT
>site_40
ACCTCCCCTCCCTCGG
>site_41
TCCTCCCCTCCGCCTC
>site_42
GCCTCCTCTCCGTGCC
>site_43
ACCTCCCCGCCGTGCG
>site_44
ACCTCTCCTCCGTCGC
>site_45
CGCACCCCTCCGTCTC
>site_46
ACCTCCCCTCCCTCGG
>site_47
TTCACCCCTCCGTGTT
>site_48
CCGTCCCCTCTGTCTC
>site_49
TTCTCCCCTCTGCCTA
>site_50
TCCTCCCCTCCGCCTG
>site_51
CACTCTCCTCCGCCTC
>site_52
CGCTCTCCTCCGCCTA
>site_53
ACCTCCCGTCCGTTTC
>site_54
CCCTCCCGTCCGTGTC
>site_55
CGCTCCCCTCCTTATG
>site_56
GGCTCCTCTCCGTGAC
>site_57
CTCTCCCGTCCGTCCG
>site_58
GCATCCCCTCCGTCCA
>site_59
AGCTCCCCTCCCTCCT
a	0	0	0	0	0	2	2	2	1	0	0	0	2	0	0	0	0	1	0	2	1
c	0	0	0	2	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	1
g	0	0	0	0	0	0	0	0	1	0	0	2	0	2	1	2	2	1	2	0	0
t	2	2	2	0	2	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0
//
; Sites	2
>site_0
TTTCTAAAATCGAGGGGGGAA
>site_1
TTTCTAAAGCCGAGTGGAGAC
; Host name	baobab.eead.csic.es
; Job started	2021-02-18.111406
; Job done	2021-02-18.111406
; Seconds	0.17
;	user	0.17
;	system	0.02
;	cuser	0
;	csystem	0