; convert-matrix  -v 1 -i W10/regulonW10.rm.fna.peaks-rm/results/dyads_test_vs_ctrl/peaks_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o W10/regulonW10.rm.fna.peaks-rm/results/dyads_test_vs_ctrl/peaks_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.txt
; Input files
;	input	W10/regulonW10.rm.fna.peaks-rm/results/dyads_test_vs_ctrl/peaks_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	W10/regulonW10.rm.fna.peaks-rm/results/dyads_test_vs_ctrl/peaks_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	2	8	2	0	21	0	0	0	20	1	17	4	9	3
c	10	5	18	22	0	2	22	22	1	21	2	17	5	9
g	6	8	2	0	1	20	0	0	0	0	0	1	5	6
t	4	1	0	0	0	0	0	0	1	0	3	0	3	4
//
; Sites	22
>site_0
GAACAGCCACACAT
>site_1
CTCCGGCCACACGC
>site_2
CGCCAGCCACAAGG
>site_3
AACCAGCCACAATC
>site_4
GGCCACCCACACTG
>site_5
CACCAGCCACACCT
>site_6
TCCCAGCCACCCAA
>site_7
GGCCAGCCACAGAA
>site_8
CGCCAGCCACCCAG
>site_9
CACCAGCCAAACCA
>site_10
ACCCAGCCCCACAC
>site_11
GGGCAGCCACACGC
>site_12
TAACAGCCACACGC
>site_13
TGCCAGCCACACAC
>site_14
CGCCAGCCTCACGC
>site_15
GCCCACCCACACCG
>site_16
CACCAGCCACTCCT
>site_17
CAGCAGCCACACAG
>site_18
GACCAGCCACTCTG
>site_19
TCCCAGCCACAAAT
>site_20
CGCCAGCCACAAAC
>site_21
CCCCAGCCACTCCC
a	9	10	0	0	0	15	7	2	0	12	2	1	11	10	13	1	7	3	2	38	2	8	10
c	15	15	4	41	41	2	14	26	25	12	14	12	22	20	17	30	17	37	41	1	40	17	13
g	12	9	36	1	2	13	17	9	14	10	21	24	8	5	13	4	16	1	0	3	2	18	9
t	8	10	4	2	1	14	6	7	5	10	7	7	3	9	1	9	4	3	1	2	0	1	12
//
; Sites	44
>site_0
CTCCCTGCCGCTCCGCGCCACAC
>site_1
GATCCACCGTGGGGGCACCACGG
>site_2
AGGCCAGCGTGTGCACTCCACGA
>site_3
ATGCCGTCCCCACCCTCCCACGT
>site_4
CCGCCTGCCACGTCACACCAGCA
>site_5
CATCCGAGGTGGCAACACCACAC
>site_6
TCGCCAGCTGTCACGGCCCACAC
>site_7
TGGCCCACGAGGCAACCCAACCA
>site_8
TGGCCGACCCATAAATCCCACGT
>site_9
AGGCCAGCTGGCCTGCCCCCCAC
>site_10
CTTCCTTCCCGGCCACGCCACCC
>site_11
AACCCGACGGTGCACCACCACGG
>site_12
GCGCGTCTCGGTCTCCGCCACGG
>site_13
GCGCCCGGCTGGCGCTCCCACCT
>site_14
TCGCCAGCGATCTGCCCCCACCG
>site_15
CTGGCTGCTTGGCCTCCCCACCG
>site_16
CAGTCTCCTCGTCCGCGCCACCG
>site_17
GTGCCGTGCTCTCCACCTCACTA
>site_18
GTGCCGCCGCCGCCGCCCCACGT
>site_19
ACGCCACACAGGGCACGTCAAGT
>site_20
ACGCCACGCAGGGAGTAGAACGT
>site_21
TCGCCGCTGCCCACCCGCCACCT
>site_22
CAGCCAGCCATGGAAGCCCTCGC
>site_23
AGGCCGGCGACGGCCTCCCGCAG
>site_24
GCCCCAGCCAGTACCTGCTACGA
>site_25
CAGTCATGCGCGAAACGCCACAG
>site_26
CCCCCACCCACGTCCCGCCACGT
>site_27
CGGCGTCAGGGGAAGCGCCACGC
>site_28
CTGCCTGCCAGCCACACACACCT
>site_29
ACGCCAGCCGCCGGAGGCCACCA
>site_30
GGGCCATCCTGCATGCGCCAACA
>site_31
GAGCCTCGCCGGCCCCCACGCGC
>site_32
TCGCCGGCCCCCACGCGCCAGCC
>site_33
CGTCCTGTCGGGCTCCACCACGC
>site_34
GCGCCGACGAACCACCCCCACCA
>site_35
ATGCCTTGCTTGAGATGCCACGA
>site_36
CTGCCTGCCCCGCTCGCTCACCT
>site_37
GCGCCTCGTCGCCCCTGCCTCCT
>site_38
GAGCCAACGATGCCCCTCCACGC
>site_39
CGGCCTATGGGGATGCTCCACCT
>site_40
TAGCCGCTGCCGGTGCTCCACAC
>site_41
CAGCCACTCTGCCTCCGCCGCGC
>site_42
TCGCCGGTCTCCACGTAACACCG
>site_43
GTGCTGCGCCTGCTACCCCACAA
a	13	10	1	3	2	15	4	3	9	16	4	0	12	12	16	3	19	4	3	44	5	9	11
c	17	18	41	45	50	0	18	27	35	14	19	9	26	26	19	36	14	45	46	3	11	21	22
g	11	12	3	3	1	12	24	17	6	8	24	35	12	2	16	1	20	2	2	4	28	11	11
t	12	13	8	2	0	26	7	6	3	15	6	9	3	13	2	13	0	2	2	2	9	12	9
//
; Sites	53
>site_0
CTCCCTGCCGCTCCGCGCCACAC
>site_1
GCTCCTCCGCGCGCGCGCCAGCA
>site_2
CCGCCTGCCACGTCACACCAGCA
>site_3
CATCCGAGGTGGCAACACCACAC
>site_4
TACCCTCCCCTCGCCTAGCAGAG
>site_5
TGCCATGTGGCGCAACCCCAGTG
>site_6
ATCCCAGCCCGGGATCGCCAGCC
>site_7
AGCCCTCCAAGTCACCACCAACC
>site_8
AACCCAGCATGGCCGCCGCAGCC
>site_9
CTTCCTTCCCGGCCACGCCACCC
>site_10
TTCCCGGCCACGCCACCCCGTGG
>site_11
TCCCCTGGCACGCATCCCCGGAC
>site_12
TGCACGTGCACGGCATGCCACTG
>site_13
AACCCGACGGTGCACCACCACGG
>site_14
ATCTCTGGTCGGGTCCCACAGCC
>site_15
ATCCCAGCCACCCAATCACAATA
>site_16
CTCGCTCGCTAGCCGCGCCATGA
>site_17
TCCCCACCCCACCCCCGTCAGGT
>site_18
CCCACTCGCTCGATCCACCGGAT
>site_19
TGCCCTCCTTATACGCGCCAAGA
>site_20
TCGCCAGCCTCGGCACCCCGGCC
>site_21
CCCCCGTCCAGGCCGCGCCCGTC
>site_22
CTTCCTAGCCCCGCCCGCCAGTG
>site_23
GTCCCAGGAGGGCCACACAACCC
>site_24
GGCCCAGCCATCAACTGCCCGTC
>site_25
CACCCTCCAAACACGTGCCACGA
>site_26
GCCCCAGCCAGTACCTGCTACGA
>site_27
CCCCCACCCACGTCCCGCCACGT
>site_28
GACCCACTATGTAGCTCCCAACC
>site_29
AGCACACACTGGGCGCACCAGAT
>site_30
ATTCCTCTCTGGATCCACGAGAC
>site_31
ACCCCACACGTTATATACAAGTC
>site_32
CACCCGTGCGGCCACCGCCTGCA
>site_33
GGCCCTACGTGGCAGCCCGACTA
>site_34
TCCCCACGGCCGCCGCCACAGCT
>site_35
TCGCCGGCCCCCACGCGCCAGCC
>site_36
ACCCCGCCCACGCCGCGCCATCG
>site_37
CGTCCTGTCGGGCTCCACCACGC
>site_38
GGCCCGGGCTTGGTAAACTAGCA
>site_39
ACCCCTCGCCGTCGCTCCCTGCA
>site_40
AACGCTGGCTCTGCGTGCCAGGT
>site_41
CTACCTGGCACGCAGAGCCAGCG
>site_42
GGCCCTGACAGGACACAAAAGCC
>site_43
GACCCATCTAGGCCAAACCATTC
>site_44
CACGCGGGCCGTATACGTCAGTG
>site_45
CGCCGTGGATCGACACACCATCT
>site_46
CTCCCTCCCCCGCTATACCATTC
>site_47
TGTCCTGCACGGCTGCCCCATAT
>site_48
GCCCCTGTACGGCTGTACCCTGT
>site_49
CCCCCGTTCAGGCTCCACCAACC
>site_50
TCTCCTCCCTTGGACGACCAGCG
>site_51
ACCTCATCATGGGTCTCCCATTC
>site_52
GTCCAGGGCGCGTTCCCCCAGAG
a	6	9	2	0	0	14	8	2	0	14	1	0	11	6	12	3	5	3	2	15	0	33	0	11	2
c	17	13	1	40	41	12	13	18	19	10	16	12	20	25	19	21	24	23	26	18	40	4	38	14	13
g	8	12	36	2	2	8	18	17	12	7	18	25	11	4	10	4	13	17	1	10	2	4	3	12	18
t	12	9	4	1	0	9	4	6	12	12	8	6	1	8	2	15	1	0	14	0	1	2	2	6	10
//
; Sites	43
>site_0
CTCCCTGCCGCTCCGCGCCACACCT
>site_1
CTGCCGGGCTTGCCCCGCTCCCCAC
>site_2
CTGCCCGCCGCGCGCCACCGCATTT
>site_3
CATCCGAGGTGGCAACACCACACCC
>site_4
CCTCCTCTTCGGCCGCCGCACACCG
>site_5
AAGCCTAATTTGGCAGGGCCCACAT
>site_6
CCGCCGGGCATGGCTTCGCCCACCG
>site_7
GGGCGTCACATGACCTCGTCCACGT
>site_8
TCGCCAGCTGTCACGGCCCACACAT
>site_9
ACTCCCGCGAGGACATCGCGTACCG
>site_10
AGGCCAGCTGGCCTGCCCCCCACAG
>site_11
CTGCCTTCGAGCGTTTCCTACACAG
>site_12
GCGCCACGTTCGCCATCGCGCTCGC
>site_13
GCGCCACGGCAGCTCCGGTGCACGT
>site_14
TAGCCAGCCACGGACGCGCAGACGG
>site_15
TTGCCACGGCGCCACTGGAACACGT
>site_16
GCGCCATGTACGAGCTCACCCACGC
>site_17
CGGCCAGGCAGCACCCGCTCCGCCT
>site_18
AGACCTGGGCGCACGCCCTCCACAG
>site_19
GCGCCCGGCTGGCGCTCCCACCTTC
>site_20
ACGCCGTCGACGCCGACGTCCACAG
>site_21
TCGCCAGCCTCGGCACCCCGGCCCC
>site_22
GGGCCCCGTGCCGCCGCCCCCACCC
>site_23
AGGCCGGCGACGGCCTCCCGCAGCT
>site_24
CCGTCCTCCTTCCCCTCCCACACGG
>site_25
TCGCCGGGCAGCCACACGCCCCCCG
>site_26
TGGCGAAGGTGGTTGTAGTACACTC
>site_27
CTGCCACTGCCTGCCAGCCACACAC
>site_28
CTGGCTACCAGTACACACTACAGAC
>site_29
TGGCCACCCATCCCACGACGCACCG
>site_30
TGGCCCGGCTCGGCCCGGCCCACGT
>site_31
GAGCCTCGCCGGCCCCCACGCGCCA
>site_32
CGTCCTGTCGGGCTCCACCACGCGC
>site_33
CAGCCCAGGAGGCAGCCCAACACGA
>site_34
TGGCCCACTCCGCCATGCCCCAGTG
>site_35
CAGGCACCTTTGAAGTGCTCCACTG
>site_36
CTGCCGGCTTCCATCTCCTCCTCTC
>site_37
TAGCCGCTGCCGGTGCTCCACACCG
>site_38
CAGCCACTCTGCCTCCGCCGCGCGC
>site_39
TTGCCCCCTCGTACACGGTCCACAG
>site_40
CGACCCGGCACGAGACCGTGCACGG
>site_41
TCGCCCATCCGTCCACCGGCCACCG
>site_42
GAGCCCACTGCTGCATCGTCCACAG
a	7	6	1	1	22	1	4	0	7	1	5	3	5	3	6	1	9	0	3	1	3	0	10	3	0	21	1	14	2	5
c	9	7	23	21	1	7	12	9	13	8	7	7	9	9	12	7	14	16	3	10	14	12	0	18	20	1	22	3	13	8
g	7	10	1	2	0	14	10	14	6	7	12	8	11	8	6	13	3	8	12	14	9	10	12	5	5	1	3	5	9	9
t	3	3	1	2	3	4	0	3	0	10	2	8	1	6	2	5	0	2	8	1	0	4	4	0	1	3	0	4	2	4
//
; Sites	26
>site_0
TCGCAGGGGGCTGCCGAGGGCGACGGCAGG
>site_1
GCCCACCTCCCTGCCGCTCCGCGCCACACC
>site_2
CGCCCGCGCTCGGCTTCCTGCCACCACCCC
>site_3
GACCATAGCTGTCACTCGGGGTGCCTAACT
>site_4
CACCACGGGCATGTGCCCGGGCTCCCCAGC
>site_5
GGCCAGGGGCGCCGCGACGGCCGACAGAGA
>site_6
AGCCATGGCGATCTCCAGTTGGAGCACGCG
>site_7
CCCCATCCCGCTTCGTCCTCCGGCCTCTCG
>site_8
GTCCAGCGGTGGAGCGGCGGCCGCCTCTCG
>site_9
GTTCAGATGTCAGAAGACGGAGGCCACACA
>site_10
CCCCTGGCACGCATCCCCGGACGCCACGCC
>site_11
GACGAGACATGCGGGGCGTCCGTCCACGCT
>site_12
AGAGAGACCTGGGCGCACGCCCTCCACAGT
>site_13
CACCACGCCGTCGACGCCGACGTCCACAGA
>site_14
TTCCATGGCTGGCTGGCTGGCCGAGACGTA
>site_15
CCCCACCCACGTCCCGCCACGTGGCACACA
>site_16
AGCCACCGAGAGCGACGGCGCGGCGAGAGC
>site_17
CGCTAGGGCTCGGGAGAGGCGGAGGAGACG
>site_18
CACCTGGGCCCCACGGCCTCCCGCTACAGC
>site_19
TGCCTGCCAGAGACAGCCTGCTACGACGGG
>site_20
AGCAACCTCGTCCTCTACTGCTGCCACTCT
>site_21
GGCCAGCGGCGCGGCACCTGGCAGCACTAG
>site_22
CCCCAGCCACGACGCCGCCCGGACCACCGG
>site_23
ACCCACCCCTGAGTTTCCACACACCACCCC
>site_24
AACCAAGGATAGAGAGAGAGCGAACACAAC
>site_25
AGCTAGCGCAGTCCACAGGCGCAGCACATG
; Host name	baobab.eead.csic.es
; Job started	2021-02-18.131459
; Job done	2021-02-18.131459
; Seconds	0.17
;	user	0.17
;	system	0.03
;	cuser	0
;	csystem	0