; convert-matrix  -v 1 -i W11/regulonW11.rm.fna.peaks-rm/results/oligos_5-7nt/peaks_oligos-2str-noov_5-7nt_mvk2_2_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o W11/regulonW11.rm.fna.peaks-rm/results/oligos_5-7nt/peaks_oligos-2str-noov_5-7nt_mvk2_2_pssm_count_matrices.txt
; Input files
;	input	W11/regulonW11.rm.fna.peaks-rm/results/oligos_5-7nt/peaks_oligos-2str-noov_5-7nt_mvk2_2_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	W11/regulonW11.rm.fna.peaks-rm/results/oligos_5-7nt/peaks_oligos-2str-noov_5-7nt_mvk2_2_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	8	11	28	28	28	0	0	0	10	10
c	9	12	0	0	0	0	0	28	7	6
g	6	4	0	0	0	28	28	0	4	5
t	5	1	0	0	0	0	0	0	7	7
//
; Sites	28
>site_0
ACAAAGGCCA
>site_1
GCAAAGGCAG
>site_2
CCAAAGGCCC
>site_3
CAAAAGGCCA
>site_4
CCAAAGGCAC
>site_5
CAAAAGGCTA
>site_6
TAAAAGGCAT
>site_7
CAAAAGGCGT
>site_8
GGAAAGGCCG
>site_9
CAAAAGGCTT
>site_10
ACAAAGGCAA
>site_11
GAAAAGGCAA
>site_12
AGAAAGGCTA
>site_13
ACAAAGGCGC
>site_14
TCAAAGGCAG
>site_15
ATAAAGGCAA
>site_16
TCAAAGGCTT
>site_17
CCAAAGGCCA
>site_18
ACAAAGGCAA
>site_19
GAAAAGGCGG
>site_20
AAAAAGGCAT
>site_21
CCAAAGGCCA
>site_22
GAAAAGGCTT
>site_23
TAAAAGGCTC
>site_24
AGAAAGGCCG
>site_25
CAAAAGGCTC
>site_26
TGAAAGGCGT
>site_27
GCAAAGGCAC
a	23	24	50	0	0	0	0	50	9	11
c	8	6	0	0	0	0	0	0	12	7
g	12	9	0	0	0	0	50	0	9	16
t	7	11	0	50	50	50	0	0	20	16
//
; Sites	50
>site_0
GAATTTGACT
>site_1
GAATTTGACT
>site_2
GAATTTGACG
>site_3
AAATTTGATG
>site_4
ATATTTGATG
>site_5
AAATTTGAAT
>site_6
GCATTTGAAG
>site_7
CTATTTGATG
>site_8
AAATTTGACG
>site_9
AAATTTGACG
>site_10
AAATTTGAGA
>site_11
ATATTTGAGA
>site_12
ATATTTGATC
>site_13
TAATTTGATG
>site_14
AAATTTGAAT
>site_15
AAATTTGATC
>site_16
TAATTTGATC
>site_17
CGATTTGACT
>site_18
CTATTTGACT
>site_19
AAATTTGAGA
>site_20
GGATTTGACC
>site_21
CAATTTGAGG
>site_22
GCATTTGAAT
>site_23
TAATTTGACT
>site_24
GAATTTGAAA
>site_25
AAATTTGAGT
>site_26
TGATTTGAGT
>site_27
TAATTTGATA
>site_28
AAATTTGAGA
>site_29
ACATTTGATG
>site_30
GTATTTGACA
>site_31
TTATTTGACG
>site_32
ATATTTGATT
>site_33
AAATTTGACT
>site_34
CGATTTGATT
>site_35
CGATTTGAGA
>site_36
ATATTTGATC
>site_37
GCATTTGATC
>site_38
GTATTTGATG
>site_39
CCATTTGATT
>site_40
GAATTTGAAT
>site_41
GGATTTGAGG
>site_42
AAATTTGATG
>site_43
CGATTTGATG
>site_44
AAATTTGAAA
>site_45
AAATTTGAAA
>site_46
TTATTTGAAT
>site_47
AGATTTGATC
>site_48
AGATTTGATG
>site_49
ACATTTGATA
a	5	5	0	1	11	9	9	0	0	0	1	3	3
c	3	1	0	8	0	0	0	0	2	0	0	2	2
g	3	4	1	1	0	1	0	0	9	11	0	4	4
t	0	1	10	1	0	1	2	11	0	0	10	2	2
//
; Sites	11
>site_0
CCTCAATTGGTTA
>site_1
AATCATATGGTGC
>site_2
CTGCAAATGGTGA
>site_3
AGTCAAATCGTAG
>site_4
AGTGAAATGGTAC
>site_5
GATCAATTGGTTG
>site_6
GGTCAGATGGTGA
>site_7
AATCAAATGGAAG
>site_8
GGTTAAATGGTGG
>site_9
CATCAAATCGTCT
>site_10
AATAAAATGGTCT
a	59	54	181	181	181	181	0	52	54
c	39	50	0	0	0	0	0	37	34
g	45	40	0	0	0	0	0	38	38
t	38	37	0	0	0	0	181	54	55
//
; Sites	181
>site_0
AAAAAATTA
>site_1
GGAAAATAA
>site_2
TCAAAATAG
>site_3
ATAAAATTG
>site_4
AAAAAATTG
>site_5
TCAAAATCT
>site_6
GTAAAATGT
>site_7
GAAAAATAT
>site_8
TCAAAATTT
>site_9
GGAAAATCA
>site_10
AGAAAATAA
>site_11
GGAAAATGG
>site_12
ACAAAATTC
>site_13
ACAAAATGG
>site_14
CAAAAATTC
>site_15
CCAAAATGG
>site_16
TGAAAATGG
>site_17
AGAAAATGC
>site_18
TCAAAATCT
>site_19
AAAAAATCC
>site_20
GCAAAATGA
>site_21
ATAAAATTT
>site_22
CAAAAATCA
>site_23
CAAAAATAT
>site_24
TAAAAATCG
>site_25
CAAAAATTG
>site_26
GAAAAATAT
>site_27
CGAAAATTG
>site_28
GAAAAATCA
>site_29
CAAAAATTT
>site_30
GCAAAATAA
>site_31
ATAAAATAA
>site_32
AGAAAATTT
>site_33
GCAAAATGA
>site_34
AGAAAATGG
>site_35
CTAAAATCC
>site_36
ACAAAATTA
>site_37
TCAAAATTT
>site_38
AAAAAATAT
>site_39
AGAAAATTC
>site_40
CCAAAATCT
>site_41
ACAAAATGT
>site_42
ACAAAATCT
>site_43
ACAAAATCC
>site_44
TGAAAATCG
>site_45
GTAAAATTG
>site_46
TCAAAATAA
>site_47
AGAAAATAA
>site_48
AGAAAATGT
>site_49
AGAAAATCC
>site_50
CTAAAATTC
>site_51
GTAAAATAA
>site_52
CTAAAATCA
>site_53
GAAAAATTC
>site_54
ATAAAATTT
>site_55
TCAAAATTT
>site_56
CCAAAATCC
>site_57
GGAAAATAT
>site_58
CTAAAATAG
>site_59
CGAAAATGG
>site_60
GGAAAATAA
>site_61
GAAAAATCA
>site_62
GCAAAATTA
>site_63
GTAAAATCC
>site_64
ACAAAATCC
>site_65
GAAAAATCT
>site_66
TAAAAATGT
>site_67
GCAAAATCA
>site_68
CTAAAATTA
>site_69
GTAAAATGA
>site_70
CAAAAATAT
>site_71
ACAAAATAA
>site_72
TGAAAATAC
>site_73
GGAAAATAG
>site_74
AAAAAATAG
>site_75
AGAAAATTA
>site_76
GAAAAATTG
>site_77
AAAAAATTT
>site_78
AAAAAATAT
>site_79
GGAAAATAA
>site_80
CAAAAATTT
>site_81
GCAAAATAC
>site_82
GTAAAATAA
>site_83
TGAAAATAA
>site_84
AAAAAATAA
>site_85
ATAAAATTA
>site_86
AGAAAATAT
>site_87
AAAAAATAT
>site_88
TTAAAATCA
>site_89
GCAAAATTA
>site_90
AGAAAATCG
>site_91
AGAAAATCT
>site_92
CCAAAATAA
>site_93
TAAAAATTC
>site_94
TCAAAATAA
>site_95
CCAAAATGC
>site_96
GAAAAATCG
>site_97
CAAAAATTA
>site_98
GGAAAATCT
>site_99
GGAAAATTT
>site_100
GAAAAATTT
>site_101
ACAAAATTT
>site_102
TTAAAATTT
>site_103
TCAAAATTA
>site_104
GGAAAATAG
>site_105
GAAAAATGC
>site_106
TCAAAATTT
>site_107
CCAAAATAT
>site_108
ACAAAATGA
>site_109
ATAAAATAC
>site_110
ATAAAATGT
>site_111
ATAAAATGC
>site_112
TAAAAATTC
>site_113
CAAAAATGA
>site_114
AAAAAATGG
>site_115
TCAAAATGT
>site_116
AGAAAATCT
>site_117
AAAAAATGG
>site_118
AAAAAATGG
>site_119
AGAAAATGG
>site_120
AGAAAATTT
>site_121
AAAAAATCT
>site_122
TAAAAATAA
>site_123
GAAAAATCA
>site_124
AAAAAATGT
>site_125
GCAAAATTT
>site_126
CGAAAATTA
>site_127
CGAAAATTA
>site_128
TCAAAATGG
>site_129
CTAAAATCC
>site_130
CCAAAATCA
>site_131
CCAAAATTT
>site_132
GAAAAATAG
>site_133
TAAAAATAA
>site_134
GTAAAATCG
>site_135
CAAAAATCA
>site_136
TCAAAATCA
>site_137
TAAAAATCG
>site_138
GGAAAATGT
>site_139
CCAAAATAC
>site_140
TGAAAATGA
>site_141
TCAAAATTC
>site_142
CGAAAATTC
>site_143
CCAAAATAG
>site_144
AAAAAATGC
>site_145
GCAAAATAA
>site_146
ATAAAATGA
>site_147
AGAAAATTC
>site_148
ATAAAATAA
>site_149
CGAAAATGG
>site_150
TGAAAATAG
>site_151
CTAAAATTT
>site_152
CAAAAATGG
>site_153
CCAAAATCC
>site_154
AAAAAATGT
>site_155
GAAAAATTC
>site_156
TCAAAATTG
>site_157
CCAAAATCA
>site_158
TTAAAATAC
>site_159
CAAAAATAA
>site_160
AAAAAATAT
>site_161
GTAAAATAT
>site_162
GAAAAATTG
>site_163
TTAAAATAC
>site_164
TTAAAATTG
>site_165
TTAAAATTA
>site_166
ACAAAATAA
>site_167
ATAAAATCT
>site_168
ATAAAATGG
>site_169
AAAAAATTT
>site_170
CAAAAATAT
>site_171
AAAAAATGA
>site_172
GTAAAATGA
>site_173
TGAAAATTC
>site_174
TAAAAATTT
>site_175
TTAAAATTT
>site_176
CTAAAATAT
>site_177
ACAAAATAG
>site_178
TCAAAATAC
>site_179
GCAAAATAT
>site_180
GTAAAATGC
; Host name	baobab.eead.csic.es
; Job started	2021-02-18.131620
; Job done	2021-02-18.131620
; Seconds	0.17
;	user	0.17
;	system	0.02
;	cuser	0
;	csystem	0