; convert-matrix -v 1 -i W2/regulonW2.rm.fna.peaks-rm/results/oligos_5-7nt/peaks_oligos-2str-noov_5-7nt_mvk2_2_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o W2/regulonW2.rm.fna.peaks-rm/results/oligos_5-7nt/peaks_oligos-2str-noov_5-7nt_mvk2_2_pssm_count_matrices.txt ; Input files ; input W2/regulonW2.rm.fna.peaks-rm/results/oligos_5-7nt/peaks_oligos-2str-noov_5-7nt_mvk2_2_pssm_count_matrices.tf ; Input format transfac ; Output files ; output W2/regulonW2.rm.fna.peaks-rm/results/oligos_5-7nt/peaks_oligos-2str-noov_5-7nt_mvk2_2_pssm_count_matrices.txt ; Output format tab ; pseudo-weight 1 a 3 9 3 15 0 0 1 0 0 0 1 20 2 0 5 7 c 9 4 3 5 2 1 0 0 22 22 18 0 3 17 5 2 g 5 7 17 2 0 21 22 23 0 0 3 3 4 3 4 10 t 6 3 0 1 21 1 0 0 1 1 1 0 14 3 9 4 // ; Sites 23 >site_0 GGGCTGGGCCCGTCAC >site_1 TAGGTTGGCCCATCTA >site_2 TAGATGGGCCAACCTA >site_3 TGGATGGGCCCAGTAA >site_4 TTACTGGGCCCATCCA >site_5 TAGATGGGCCGAGCAA >site_6 ACGGTGGGCCCAGCTG >site_7 CAGCTGGGCCCACCGT >site_8 GGGATGGGCCGACCGG >site_9 CAGACGGGCCCATGAG >site_10 CTCATGGGCCCGTCTG >site_11 ACGCTGGGCCCATTTG >site_12 CAAATGGGCCCAGCGT >site_13 AAGACGGGCCCATGAG >site_14 CTCATGGGCCCGTCTT >site_15 CGGTTGGGCCCATCCA >site_16 TGGATGGGCCCAACCG >site_17 CCCATGAGCCCATCTG >site_18 CAGATGGGCTCATGGG >site_19 GGGCTGGGCCTATCCA >site_20 CAAATCGGCCCATCCC >site_21 GGGATGGGCCGATTTG >site_22 GCGATGGGTCCAACTT a 70 81 212 223 7 8 3 3 236 21 10 86 70 c 76 72 17 2 10 235 241 243 4 17 197 50 78 g 47 55 8 21 228 4 2 0 6 23 19 35 57 t 55 40 11 2 3 1 2 2 2 187 22 77 43 // ; Sites 248 >site_0 CCAAGCCCATGAG >site_1 ATAAGCCCACCGC >site_2 TAAAACCCATCTT >site_3 AAAAGCCCACCTT >site_4 CCAAGCACATCCC >site_5 CGCAGCCCATCTC >site_6 GAAAGCCCATCAT >site_7 TGAAGCCCATGCC >site_8 TGAGGCCCATCAT >site_9 CCTAGCCCATCGT >site_10 GTAAGCCCAGCAA >site_11 AGAAGCCCATATG >site_12 AAAAGACCATCAG >site_13 AAAGGCCCATCTG >site_14 CAAAGCCCAACAC >site_15 AGAAGCCCAACAT >site_16 GTAAGCCCATGTG >site_17 TCAAGCCCAGCCC >site_18 CCCAGCCCATCCT >site_19 CAAAGCCCATTGC >site_20 GCAAGCCCATTAG >site_21 AAAAGCCCACCAA >site_22 CCAAGCCCACCGC >site_23 CCAAGCCCATCCG >site_24 CAAAGCCCATCAG >site_25 CGAAGCCCACCAT >site_26 AGAAGCCCATAAC >site_27 GGAGGCCCATCAC >site_28 AAAAGCCCAGCAT >site_29 CGCAGCCCATCTC >site_30 CGAAGCCCATGCC >site_31 AAAAGCCCATTTT >site_32 TTAAGCCCCTCCT >site_33 GGAAGCCCATAAG >site_34 AGAAGCCCATGGT >site_35 CCAAGCCCAGCCC >site_36 TAAAGCCCATTAA >site_37 GTAAGCCCCTCGC >site_38 AAAAGCCCATGAA >site_39 CGAAGCCAATCCC >site_40 TAAAGCCCATTCC >site_41 TTCAGCCCATCAT >site_42 TCGAGCCCATCCC >site_43 CTAAACCCATCAA >site_44 ACAAGCCTATCTT >site_45 CCCAGCCCATCCC >site_46 TAAGGCCCATCTC >site_47 CCTAGCCCATCCG >site_48 GCAAGCCCAGCCC >site_49 GGAAGACCATCAC >site_50 TCTAGCCCATCGC >site_51 TAAAGCCCAACTA >site_52 TTAGGCCCATCTA >site_53 CCAAGCCCAGCGG >site_54 AATAGCCCATCCA >site_55 AATAGCCCATCTA >site_56 GGAAGCCCACCAA >site_57 TAAAGGCCATCGT >site_58 GGAAGCCCATTCC >site_59 TAAAGCCCATATA >site_60 TTAAACCCATCAC >site_61 TGAAGCCCATCAA >site_62 AAAAGCCCATTTA >site_63 TCAACCCCATCAT >site_64 TAAAACCCATCAC >site_65 TAAAACCCATCAC >site_66 CAAAGCCCATGCT >site_67 CAAAGCCCTTCTT >site_68 TCAAGCCCAGCCC >site_69 AGAAGCCCAGCTC >site_70 AGACGCCCATCAC >site_71 AAAAGCCCATCTC >site_72 ACAAGCCCATCTT >site_73 CTTAGCCCATCAA >site_74 CCAAGCCCGTCGA >site_75 TTAAGCCCAACAC >site_76 TCAAGCACATCCC >site_77 GAAAGCCCATGTA >site_78 TCAAGCCCTTCGT >site_79 ACAAGCCCACCTG >site_80 AGCAGCCCATCTC >site_81 TTCAGCCCATCTC >site_82 AGAAGCCAATCAT >site_83 TGAAGCCCATGAT >site_84 TGCAGCCCATCTA >site_85 ACAAGCGCATCTC >site_86 GGAAGCCCGTCGG >site_87 AAAGGCCCATCCT >site_88 CAAAGCCCATATA >site_89 AGAGGCCCATCGC >site_90 GAAAGCCCAACAA >site_91 TAAGGCCCATCTC >site_92 GCAAGCCCACCGA >site_93 TACAGCCCATCTT >site_94 TAAAGCCCATACA >site_95 AGAAGTCCATCCC >site_96 CGAAGCCCATGGG >site_97 GAAAGCCCATGGA >site_98 CGAAGCCCATGGT >site_99 CAAAGCCCAACTG >site_100 CCAAGCCCATATG >site_101 AAAACCCCATCCG >site_102 CAAAGCCTATCTT >site_103 GCAGGCCCATCAA >site_104 TCAAGCCCATCAG >site_105 GCAAGCCCAGCCC >site_106 CCAAGCCCAGCCC >site_107 CAAAGCGCATCTC >site_108 AAAAGCCCATTTA >site_109 ATAAGCCCAACTA >site_110 TAAAGCCCATCTT >site_111 GAAAGACCATCAC >site_112 ATAAGACCATCAT >site_113 TCAGGCCCATCAA >site_114 CCAATCCCATCGG >site_115 GCAAGACCATCAC >site_116 AAAACCCCATCCC >site_117 GCAAGGCCATCGC >site_118 GGTAGCCCATCCT >site_119 TGCAGCCCATCGG >site_120 TCAATCCCATCCG >site_121 GCAACCCCATCAC >site_122 CAAAGCCCATTAG >site_123 TTAAGCCCAACAA >site_124 GTAAGCCCATCTA >site_125 TGAACCCCATCTC >site_126 CCCAGCCCATCTA >site_127 CAAAGCCCATCAC >site_128 GCAAGCCAATCCT >site_129 ATAAGCCCAGCAA >site_130 CACAGCCCATCTC >site_131 CCAAGCCCATTAA >site_132 AGAAGCCCACCAG >site_133 TCAAGCCCATATA >site_134 AAAAGCCCAGCAG >site_135 AAAGGCCCATCTT >site_136 TTAAGACCATCTA >site_137 TGAAGCCCATTTG >site_138 CGAGGCCCATCTA >site_139 AAAAGCCCATTTA >site_140 AAAAGCCCATTTC >site_141 CCAAGCCCAGCTG >site_142 ACAAGCCCAGCCC >site_143 GTAAGCCCAGCCC >site_144 CGAAGCCCATGGA >site_145 CCGAGCCCATCCC >site_146 ACAAGCCCAACGG >site_147 CTAAACCCATCAA >site_148 AAAAGCCCAACTG >site_149 TCAAGCCCATTTG >site_150 AGAACCCCATCCA >site_151 GTAAGCCCATCCG >site_152 TAAGGCCCATCAG >site_153 AAAATCCCATCCT >site_154 AAAAGCCCAGCAT >site_155 CTAAGCCCACCAC >site_156 TGAGGCCCATCCC >site_157 AAAAGCCCAACAG >site_158 GCCAGCCCATCAG >site_159 TAAAGCCCATTGT >site_160 CAAAGCCCACCCA >site_161 TTAAGCCCCTCAC >site_162 ACAAGCCCAGCCC >site_163 CCAGGCCCATCTC >site_164 TCAAGCCCACCTA >site_165 GCAAGCCCATAAG >site_166 CCGAGCCCATCTG >site_167 GAAAGCCCGTCGA >site_168 ACAACCCCATCGC >site_169 AAAAGCCCACCTC >site_170 TAAAGCCCAGCGA >site_171 CCAGGCCCATCAG >site_172 ACGAGCCCATCCC >site_173 ATCAGCCCATCTC >site_174 AGTAGCCCATCTA >site_175 GGAAGCCCATGAA >site_176 AAAACCCCATCGA >site_177 GGAAGCCCAGCTT >site_178 TCAGGCCCATCTC >site_179 ATAAGCCCCTCAT >site_180 AAAAGCCCATCTC >site_181 AGAAGCCCATTTG >site_182 TTAAGCCCAGCTC >site_183 CCAAGCCCATGGG >site_184 GAAAGCCCATCTA >site_185 GAAAGCCCATTTC >site_186 CGGAGCCCATCTA >site_187 GGAAGCCCAACAG >site_188 GGAAGCCCGTCTG >site_189 GCAAGCCCATCAA >site_190 GAAAGCCCATTAA >site_191 CAAAGCCCATCCT >site_192 AAAAGCCCACCCA >site_193 TTAAGCCCAACCT >site_194 CCAGGCCCATCCG >site_195 GGAAGCCCAACAA >site_196 CCAAGCCCAGCAA >site_197 ATGAGCCCATCTG >site_198 CCAAGCCCGTCTC >site_199 AAAAGCCCACCCC >site_200 CCAGGCCCATCAG >site_201 CGCAGCCCATCCC >site_202 ATAAGCCCAGCAG >site_203 CAAAGCTCATCAA >site_204 CAAAGCCCAACTG >site_205 CTAACCCCATCCT >site_206 CCAAGCCCGTCTT >site_207 CAAGGCCCATCTC >site_208 GAAAGCCCAACTA >site_209 ACAAGCCCATCAG >site_210 AAAAGCACATCAC >site_211 CAACGCCCATCCC >site_212 CTAAGCCCATGGG >site_213 CCAACCCCATCGC >site_214 AATAGCCCATCAA >site_215 AGTAGCCCATCAA >site_216 GCCAGCCCATCTA >site_217 ATAAGCCCACCGA >site_218 TTAAGGCCATCTT >site_219 CTATGCCCATCAC >site_220 GCAAGCCCAGCCA >site_221 CGAAGCCCAACAG >site_222 GGAAGCCCATTAA >site_223 AGAAGCTCATCAG >site_224 AAGAGCCCATCGT >site_225 TGAAGCCCATTAG >site_226 CCAAGCCCATGAG >site_227 CTAAGACCATCCG >site_228 CGAAGCCCAACTA >site_229 CTATGCCCATCGA >site_230 GGAAGACCATCAC >site_231 CGAAGGCCATCAA >site_232 CCAGGCCCATCAG >site_233 GAAAACCCATCTA >site_234 ATAAGCCCATGGC >site_235 AAAAGCCCATCAG >site_236 CAAAGCCCAACGG >site_237 CTAAGCCCATCTG >site_238 TTTAGCCCATCAT >site_239 GAAAGCCCATTTA >site_240 CCAAGCCCATTAA >site_241 TTCAGCCCATCAA >site_242 TCAAGCCCACCCC >site_243 CAAAGCCCAACAC >site_244 AAAAGCCCATAAA >site_245 GGAAGCCCAACTA >site_246 CCAAGCCCATGAG >site_247 ACGAGCCCATCAA a 0 0 0 0 0 0 0 0 0 1 0 1 1 1 0 0 0 0 1 0 0 0 0 0 c 1 0 0 1 0 0 0 0 1 0 1 0 0 0 1 1 1 0 0 0 0 0 0 0 g 0 1 1 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 0 t 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 // ; Sites 1 >site_0 CGGCGGGGCACAAACCCTAGGGGT a 66 86 182 18 3 1 3 3 235 24 19 68 64 c 77 72 28 2 4 236 235 234 3 7 194 59 82 g 43 50 4 222 237 2 1 4 3 17 14 33 63 t 58 36 30 2 0 5 5 3 3 196 17 84 35 // ; Sites 244 >site_0 CAAGGCCCAGCCC >site_1 TAAGGCCCAGCCC >site_2 CCAGGCCCACCCG >site_3 TGAGGCCCATGAC >site_4 GAAAGCCCATCAT >site_5 CGAGGCTCATCGT >site_6 TGAGGCCCATCAT >site_7 GACGGCCCATCTC >site_8 TCAGGCCCATTAA >site_9 AAAGGCCCATCTG >site_10 ACAGGCTCATCTC >site_11 AGAGGCCCAACAG >site_12 AAAGGCCCAGCCC >site_13 CCAAGCCCATCCG >site_14 CAAAGCCCATCAG >site_15 GGAGGCCCATCAC >site_16 TCTGGCCCATCAG >site_17 CAAGGCCCACCTG >site_18 CAAGGCCCATTTA >site_19 CTAGGCCAATCTG >site_20 CTAGGCCCGTCCA >site_21 GCAGGCCCAGCCC >site_22 AACGGCCCATCCT >site_23 CCTGGCCCATCTA >site_24 AACGGCCCATCTC >site_25 CACGGCCCATCTC >site_26 CCAGGCCCAGCCT >site_27 GGTGGCCCATCAC >site_28 GTTGGCCCATCTA >site_29 TCAGGCCCATATC >site_30 TGAGGCCCATAAA >site_31 TAAGGCCCATCTC >site_32 CCAGGCCCATTTG >site_33 CCAGGCCGATCTC >site_34 GCAGGCCCAACCC >site_35 TAAGGCCAATCCA >site_36 GCTGGCCCATCTC >site_37 CAAGGCCCATAGG >site_38 CTGGGCCCATCCA >site_39 TTAGGCCCATCTA >site_40 AGAGGCCCATAGC >site_41 GCAGGCACATCAA >site_42 ATAGGCCTATCAG >site_43 TCTGGCCCATCCG >site_44 TGAAGCCCATCAA >site_45 AAAGGCCCAGCAC >site_46 TGAGGTCCATCTT >site_47 TACGGCCCATATA >site_48 CCAGGCCCAACAA >site_49 AAAGGCCCATTTA >site_50 CGAGGCCCACCCG >site_51 CGAGGCCCACCCG >site_52 GGCGGCCCATCAC >site_53 CTAGGCCCAACTC >site_54 TTCGGCCCATCGA >site_55 AGACGCCCATCAC >site_56 AATGGCCCATCTT >site_57 GGAGGCCCAACTA >site_58 AAAAGCCCATCTC >site_59 ACAAGCCCATCTT >site_60 CACGGCCCATCGA >site_61 CTCGGCCCATCTA >site_62 GATGGCCCATCCG >site_63 AAAGGCCCAGCCC >site_64 TAAGGCCCAACCC >site_65 TACGGCCCATCGT >site_66 TCAGGCCCAGCTC >site_67 GGAGGCCGATCTG >site_68 CAAGGCCCAACTA >site_69 CCCGGCCCATCCA >site_70 TCAGGCCCAACGC >site_71 GATGGCCCATCCT >site_72 TGTGGCCCATCGG >site_73 ACCGGCCCATCCA >site_74 CTTGGCCCATCCG >site_75 TAAGGCTCATCTA >site_76 GGAGGCCCATTCG >site_77 AAAGGCCTATCTG >site_78 CAAGGCCCAGCCC >site_79 GAAGGCCCAACTG >site_80 CAAGGCCCATATA >site_81 AAAGGCCCATCCT >site_82 AGAGGCCCATCGC >site_83 TAAGGCCCATCTC >site_84 GGAGGCCCATGGC >site_85 TCAGGCCCAGCCC >site_86 TAAGGCCCTTCCT >site_87 GCAGGACCATCTT >site_88 CTTGGCCCATCCG >site_89 TTTGGCCCATCTC >site_90 AAAGGCCCAACTA >site_91 TCAGGTCCATCCT >site_92 GCAGGCCCATCAA >site_93 GGAGGTCCATCGA >site_94 ACCGGCCCATCGG >site_95 TCAAGCCCATCAG >site_96 AAAGGCCCATATG >site_97 TAAAGCCCATCTT >site_98 AGAGACCCATCGT >site_99 CCAGACCCATCCC >site_100 ATAGGCCCAGCGT >site_101 TCAGGCCCATCAA >site_102 CCCGGCCCATCGA >site_103 AAAGACCCATCCC >site_104 CAAGGCCCAACGG >site_105 AAAGGCCCAACAA >site_106 CAAGGCCCATTGG >site_107 AAAGGCCCCTCTC >site_108 AAAGGCCAATCAA >site_109 GGAGGCCCAGCTG >site_110 CGAGCCCCATCAA >site_111 GTAAGCCCATCTA >site_112 ATAGCCCCATCAA >site_113 GTCGGCCCATCCC >site_114 CAAAGCCCATCAC >site_115 GGAGGCCCACCGC >site_116 GCAGGCCGATCGT >site_117 CACGGCCCATCTT >site_118 ACAGGCCTATCTT >site_119 TGAGGCTCATCGG >site_120 AAAGGCCCATCTT >site_121 AAAGGCCCAACAA >site_122 CGAGGCCCATCTA >site_123 GCAGGTCCATCAG >site_124 ACAGGCCCAACAG >site_125 CGTGGCCCATCAT >site_126 CCTGGCCCATCTC >site_127 CATGGCCCATCTA >site_128 CTAGGCCCATGAT >site_129 GTAAGCCCATCCG >site_130 TAAGGCCCATCAG >site_131 TCCGGCCCATCAC >site_132 GGAGGCCCAACAG >site_133 CAAGGCCCCTCTT >site_134 AAAGGCACATCGA >site_135 ACAGGCCCGTCTC >site_136 TTAGGCCCATAAC >site_137 ATGGGCCCATCTA >site_138 TTAGGCCCAGCTG >site_139 AAAGGCCCATTAC >site_140 TGAGGCCCATCCC >site_141 AATGGCCCATCCA >site_142 ACAGGCCCAGCCC >site_143 CTAGGCCCACCAC >site_144 ATAGGCCCATTTG >site_145 CCAGGCCCATCTC >site_146 GAAGGCTCATCTC >site_147 CGAGGCCCCTCTG >site_148 CCTGGCCCATCTC >site_149 CCAGCCCCATCTG >site_150 CGAGGCCCATGTC >site_151 GCAGGCCCAACTC >site_152 CAAGGCCCATGTA >site_153 AAAGGCCCATACG >site_154 CAAGGCCCATGTA >site_155 CCAGGCCCAGCCC >site_156 CCAGGCCCATCAG >site_157 AAAGGCCCATAAC >site_158 TTGGGCCCATCCA >site_159 GGAGGCCCATGTG >site_160 AAAGCCCCATCGC >site_161 ACTGGCCCATCAC >site_162 TCAGGCCCATCTC >site_163 CCAGGCCCAACAG >site_164 CAAGGCCCAACAG >site_165 TGAGGCCCATATG >site_166 AAAAGCCCATCTC >site_167 GTCGGCCCATCGC >site_168 TGAGGCGCATCTA >site_169 CCAGGCCCAGCAA >site_170 TAAGGCCCATAGG >site_171 TCAGGCCCATACG >site_172 GAAAGCCCATCTA >site_173 CATGGCCCATCCA >site_174 TTTGGCCCATCTC >site_175 ATAGGCCCAACGC >site_176 TAAGGCCCATAAG >site_177 TGAGGCCCAACAC >site_178 AAAGGCACATCCG >site_179 GCAAGCCCATCAA >site_180 GCAGGCCCTTCGT >site_181 CAAAGCCCATCCT >site_182 CCAGGCCCATCCG >site_183 AGAGGCCCATAGG >site_184 ATAGGCCCAACTA >site_185 ATAGGCCCATTGC >site_186 TCAGGCCCATGAG >site_187 CCAGGCCCATCAG >site_188 AAAGGCCCATTGT >site_189 GGAGGCCCATTGC >site_190 TACGGCCCATCAA >site_191 TCAGGCCCAACAA >site_192 CAAGGCCCATCTC >site_193 CGTGGCCCATCTC >site_194 CCTGGCCCATCTC >site_195 AAAGGGCCATCCG >site_196 ACAAGCCCATCAG >site_197 CAACGCCCATCCC >site_198 CAAGGCCCATGGG >site_199 CCAGGCCCATTCA >site_200 CATGGCCCATCAC >site_201 TGAGGCCGATCCT >site_202 ACCGGCCCATCCC >site_203 TACGGCCCATATA >site_204 CTATGCCCATCAC >site_205 GGAGGCCCATTTT >site_206 CCCGGCCCATCTA >site_207 CACGGCCCATCTT >site_208 GCAGGCCCAACAC >site_209 ATAGGCCCAGCCC >site_210 CCTGGCCCATCAC >site_211 ACCGGCCCATCTT >site_212 TTTGGCCCATCTA >site_213 CGAGGCCCATGCT >site_214 ATCGGCCCATCCC >site_215 CTATGCCCATCGA >site_216 TGAGGCCCATTAA >site_217 AAAGGCCCGTCAG >site_218 AATGGCCCATCTG >site_219 CCAGGCCCATCAG >site_220 TCTGGCCCATCTC >site_221 ACCGGCCCATCCA >site_222 AAAAGCCCATCAG >site_223 CTAAGCCCATCTG >site_224 AGAGGCCCATGAC >site_225 GTAGGCCCTTCAT >site_226 TCAGGCCCACCCA >site_227 TCTGGCCCATCCA >site_228 TCCGGCCCATCCA >site_229 CAAGGCCCATGCA >site_230 TGAGGCCCAACCG >site_231 GAAGGGCCATCAC >site_232 TCTGGCCCATCTC >site_233 GCGGGCCCATCAA >site_234 AAAGGCCCATAAC >site_235 AAAGGCCCATAAC >site_236 TGAGGTCCATCTC >site_237 AAAGGCCCATGCC >site_238 CAAGGCCCATAAA >site_239 GGCGGCCCATCAT >site_240 CGAGGCCCATTGA >site_241 GCAGGCCCATTTG >site_242 CGAGGCCCATGAG >site_243 AGAGGCCCATTAT ; Host name baobab.eead.csic.es ; Job started 2021-02-18.111341 ; Job done 2021-02-18.111341 ; Seconds 0.18 ; user 0.18 ; system 0.02 ; cuser 0 ; csystem 0