One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 W8/regulonW8.rm.fna.peaks-rm/results/discovered_motifs/oligos_5-7nt_m5/peaks_oligos_5-7nt_m5.tf -format2 transfac -file2 $RSAT/_footprintDB/footprintDB.transfac.plants.motif.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o W8/regulonW8.rm.fna.peaks-rm/results/discovered_motifs/oligos_5-7nt_m5/peaks_oligos_5-7nt_m5_vs_db_footDB