; convert-matrix  -v 1 -i W8/regulonW8.rm.fna.peaks-rm/results/oligos_5-7nt/peaks_oligos-2str-noov_5-7nt_mvk2_2_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o W8/regulonW8.rm.fna.peaks-rm/results/oligos_5-7nt/peaks_oligos-2str-noov_5-7nt_mvk2_2_pssm_count_matrices.txt
; Input files
;	input	W8/regulonW8.rm.fna.peaks-rm/results/oligos_5-7nt/peaks_oligos-2str-noov_5-7nt_mvk2_2_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	W8/regulonW8.rm.fna.peaks-rm/results/oligos_5-7nt/peaks_oligos-2str-noov_5-7nt_mvk2_2_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	0	4	3	2	1	0	0	11	1	0	0	7	1	1
c	6	2	8	0	10	0	12	0	11	1	0	2	6	4
g	4	3	0	0	1	12	0	0	0	11	12	3	2	4
t	2	3	1	10	0	0	0	1	0	0	0	0	3	3
//
; Sites	12
>site_0
TCATCGCACGGGCG
>site_1
GACTGGCACGGACA
>site_2
GTCTCGCACCGATC
>site_3
CGCACGCACGGAGC
>site_4
GGCTCGCTCGGACG
>site_5
CCCTCGCACGGGTT
>site_6
CTCACGCACGGACT
>site_7
TACTAGCACGGAAG
>site_8
CACTCGCAAGGATC
>site_9
GGATCGCACGGCGG
>site_10
CAATCGCACGGGCT
>site_11
CTTTCGCACGGCCC
a	1	7	1	2	2	1	1	20	0	16	2	1	1	14	5	7
c	9	4	16	1	18	1	18	0	19	1	18	2	2	2	4	4
g	2	6	2	2	0	18	0	0	1	2	0	15	14	1	6	6
t	8	3	1	15	0	0	1	0	0	1	0	2	3	3	5	3
//
; Sites	20
>site_0
CGCCCACACACGGAAC
>site_1
CTCTCGCACTCGGTAA
>site_2
GGCACGCACACGGCTG
>site_3
TACTCCCACACGGTCC
>site_4
CACTCGCACACCGGTA
>site_5
CCCTCGCACACAGTAA
>site_6
CGCTCGCACCAGGAGC
>site_7
TTCTCGCACACTGAAG
>site_8
TGCTCGAACACGTATT
>site_9
TACTAGCACACTGACA
>site_10
CACACGCACACCGAGT
>site_11
AATTCGCACACGCAGA
>site_12
TCCGCGCACACGAAGG
>site_13
GACGCGCACACGCACT
>site_14
TCCTCGTACACGTACA
>site_15
CAGTCGCACGCGGAGA
>site_16
TCGTCGCACACGGCTC
>site_17
CGATAGCACACGGAAG
>site_18
TTCTCGCAGACGTATG
>site_19
CGCTCGCACGAGGAGG
a	13	17	74	2	1	2	80	3	4	3	72	15	21
c	23	29	4	5	5	75	0	1	5	80	4	21	28
g	40	19	4	77	79	6	2	79	76	1	7	35	24
t	9	20	3	1	0	2	3	2	0	1	2	14	12
//
; Sites	85
>site_0
GGAGGTAGGCAGG
>site_1
ACAGGCAGGAACC
>site_2
ATAGGGAGGCAAC
>site_3
CCAGCCAGGCAGA
>site_4
GGAGGCAGGCGAG
>site_5
GCAGGCAGGCTCG
>site_6
CGAAGCAGGCAAA
>site_7
TCAGGCAGGCGCG
>site_8
CTAGGAAGGCACG
>site_9
CCTGGCAGGCACC
>site_10
GCAGCCAGGCAGA
>site_11
ACCGGCAGGCAGA
>site_12
TGAGGCACGCACA
>site_13
GGAGGCAGGCAGG
>site_14
GCAGGCAGGCAGG
>site_15
GCAGGCAGGCCTC
>site_16
GCAGGCTGGCAGA
>site_17
TCACGCAGGCAGC
>site_18
GATGGCAGGCAGC
>site_19
AAAGGGAGGCATG
>site_20
AGAGGCAGGCAGT
>site_21
CTAGGCTGGCAGT
>site_22
TAAGGCAGGCCTT
>site_23
TCAGGCAGGCCAA
>site_24
AAAAGCAGGCATG
>site_25
CCAGGCAGCCAGC
>site_26
GGAGCCAGGCAGC
>site_27
ATAGGGAGGCAGT
>site_28
CAACGCAGGCAGG
>site_29
GCAGGCAGGCAAA
>site_30
AGAGGCATGCAGG
>site_31
GAAGGCAGGCCAC
>site_32
GCATGCAGGCACC
>site_33
CAAGGCGGGCATG
>site_34
GCGGGCAGGCACG
>site_35
CATGGCAGGCAGC
>site_36
TTCGGCAGGCAGG
>site_37
GCAGGCAGGTATC
>site_38
CGAGGCAGCCACC
>site_39
GTGGGCAGGCAGG
>site_40
GGAGGCAGGCACA
>site_41
GGAGCCAGGCACA
>site_42
CGGGGCAGGCAGA
>site_43
AGAGGCAGCCAAA
>site_44
CAGGGCAGGCATC
>site_45
CCAGGAAGGCAGC
>site_46
GCAGGCAGGCACG
>site_47
GTAGGCAGGAAAC
>site_48
CTAGGCAGGCGTT
>site_49
CAAGGCAGACAAT
>site_50
GTAGGCAGGCAGG
>site_51
GCAGGCAGGCGGC
>site_52
GTAGGCAAGCAAG
>site_53
GCCGGCAGGCACA
>site_54
GGAGGCAAGCAAT
>site_55
CTAGGGAGGCACT
>site_56
GCAGGCAGGCAGC
>site_57
ATAGGCAGCCATA
>site_58
ATAGGCAGACAGT
>site_59
ACAGACAGGCATG
>site_60
GTAGGCATGCATC
>site_61
GAAGGCTGGCAAA
>site_62
TGAGGCAGGCAGG
>site_63
GGAGGGAGGCACC
>site_64
GTAGGCAGGCAGC
>site_65
TCAGGTAGGCAGG
>site_66
CCACGCAGGCACG
>site_67
ATAGGCAGGCATG
>site_68
GCAGGCAGGAACA
>site_69
CGAGGCAGGCGGA
>site_70
GTACGCAGGCATT
>site_71
CTAGGCAAGCACG
>site_72
CACGGCAGGCAAA
>site_73
CAAGGCAGCCACC
>site_74
TAAGGCAGACACC
>site_75
GGAGGCAGGGACC
>site_76
CAAGGGAGGCAGT
>site_77
GCAGCCAGGCATA
>site_78
GCAGGCAGACAAC
>site_79
GAAGGCAGGCAGA
>site_80
CCACGCAGGCAGC
>site_81
GTAGGCAGGCGGC
>site_82
GTAGGCAGGCGAA
>site_83
GAAGGCAGGCTGT
>site_84
GGAGGCGGGCAGC
a	14	39	4	12	10	7	14	3	2	12	29	20
c	64	40	132	1	130	1	124	0	142	24	42	45
g	36	35	7	3	3	137	5	1	0	97	39	29
t	31	31	2	129	2	0	2	141	1	12	35	51
//
; Sites	145
>site_0
GGCTCGTTCGTG
>site_1
TGCTGGCTCGTA
>site_2
CTCGCGCTCGAT
>site_3
TCCACGCTCGTT
>site_4
TTCTCGCTCTCG
>site_5
CGCTCGCTCATC
>site_6
CTCTCGCTCCGT
>site_7
CCCTCGCTCCGT
>site_8
TCCTCGCTCGAG
>site_9
CTCTCGCTCCCG
>site_10
GACACGCTCGGC
>site_11
GACACGCTCGGC
>site_12
ATCTCGATCGAT
>site_13
CTCTCGCTCCTC
>site_14
GACTCGCTCCCA
>site_15
GTCTCGCTCGCC
>site_16
TTCTAGCTCGCT
>site_17
CGTTCGCTCGCG
>site_18
CCGTCGCTCGGC
>site_19
TGCTCGATCGAT
>site_20
CACACGCTCGAT
>site_21
GTCACGCTCGTC
>site_22
TGCTCGCTCAGC
>site_23
TGCTCGCTCAGA
>site_24
GCCTCGGTCGGG
>site_25
CCCACGCTCGGC
>site_26
TCCTCGCTCCCT
>site_27
ACCTCGCTCTTT
>site_28
CACGCGCTCGCG
>site_29
CTCTCGCTCTCC
>site_30
CCGTCGCTCGTC
>site_31
TACCCGCTCGTC
>site_32
CACTAGCTCGCG
>site_33
CTCTAGCTCGGC
>site_34
CGCTCGCTCAAT
>site_35
GCCTCGCTCCAC
>site_36
GCCTCGCTCCAC
>site_37
TCCTCGCTCGGC
>site_38
GCCTCGCTCCAC
>site_39
CACTCACTCGAC
>site_40
TTCTCGATCGTA
>site_41
CTCTCACTCGGT
>site_42
GCCTCGCTCGCA
>site_43
CGCTCGCTCTAC
>site_44
CGATCGCTCGCT
>site_45
CGCTCGATCGCT
>site_46
GGCTCGCTCCCA
>site_47
GTCACGCTCGTG
>site_48
CACTCACTCGCA
>site_49
CCCTCGCTCCGT
>site_50
CTCTCGCTCCCG
>site_51
TACTCGCTCCGT
>site_52
CCCTCGCTCATC
>site_53
GACTCGGTCGCC
>site_54
GGCTCGCTCGGA
>site_55
CACTCGCTCCGT
>site_56
AGCTAGCTCGGC
>site_57
CGCTCGCTCTCC
>site_58
AGCTCGCTCATT
>site_59
GCCTAGCTCGCT
>site_60
CCCTCGCTCCAC
>site_61
TACTCGATCGGC
>site_62
CACTCGATCGAT
>site_63
TCCTCGCTCCCT
>site_64
AACTCGCACGTC
>site_65
CAATCGCTCGTA
>site_66
GGGTCGCTCGTT
>site_67
TCCTCGCTCCGA
>site_68
GTCTCGATCGGG
>site_69
ACCTCGCTCTGT
>site_70
CACACGCTCGAT
>site_71
CGCTCGATCGGG
>site_72
CCCTCGCACGGG
>site_73
GGCTCGCTCCTC
>site_74
CTCTCGCGCGTA
>site_75
CAGTCGCTCGAT
>site_76
TACTCCCTCGGT
>site_77
GACGCGCTCGGC
>site_78
TCCTCACTCGTC
>site_79
CACTCGCTCTTC
>site_80
GACTCGCTCGAT
>site_81
CCCTCGCTCACT
>site_82
TCCTCGGTCGTC
>site_83
CGCTCGCTCCTG
>site_84
CTCTCGCTCGCT
>site_85
GTCTCGCTCGCT
>site_86
CTCTGGCTCGAT
>site_87
CTCTAGCTCGCG
>site_88
CGCTCGCTCGCT
>site_89
GGATCGCTCGCT
>site_90
AGCTCGCTCGCT
>site_91
CGCTCGCTCGCC
>site_92
GACTGGCTCGAG
>site_93
CGCTCGCTCGGG
>site_94
TGCTCGCTCGCT
>site_95
CTCTCGCTCCAG
>site_96
ACCTCGCTCTCG
>site_97
GTCTCGATCGGG
>site_98
CACTCACTCGAG
>site_99
CTATCGCTCGCT
>site_100
CACTAGCTCGTA
>site_101
AGCTAGCTCGAA
>site_102
GCCTCGCTCGTA
>site_103
ACCTCGTTCGTT
>site_104
AACACGCTCGAT
>site_105
TACTCGCTCATT
>site_106
GACTCGCTCACT
>site_107
TGCTCGCTCGCC
>site_108
GGCTCGCTCGAG
>site_109
TACTTGCTCGAT
>site_110
CTCTCGATCGAT
>site_111
CCCTCGCTCTCC
>site_112
TGCTCGATCGAC
>site_113
CGTTCGCTCGTA
>site_114
TCCTCGCTAGGC
>site_115
CACTCGCTCACT
>site_116
TTGTCGCTCGAT
>site_117
CACTCGCTCTCC
>site_118
CGCTCGCTCCCC
>site_119
GTCTCGATCGTC
>site_120
TACTCGCTCCGT
>site_121
GCCTCGCTCGCG
>site_122
CGCACGCTCGCG
>site_123
ATCTCACTCGGA
>site_124
GCCTCGATCGTC
>site_125
TCCTCGCTCAGG
>site_126
GTCTCGCTCCGT
>site_127
CTCTCGCTCTCG
>site_128
GTGTCGCTCGGG
>site_129
CCCTAGCTCGGT
>site_130
GCCTCGGTCGTG
>site_131
TACTCGCTCATC
>site_132
ACCTCACTCGGT
>site_133
CACTCGGTCGGC
>site_134
CACTCGCTTGGA
>site_135
CCCTCGCTCCGT
>site_136
CCGTCGCTCGTC
>site_137
CGCTCGCACGAG
>site_138
CCCACGCTCGTA
>site_139
TCCTCGCTAGCT
>site_140
GACTAGCTCGCA
>site_141
TGCTCGATCGTC
>site_142
AACTCGCTCTGT
>site_143
CACACGCTCGTA
>site_144
GACTTGCTCGAC
a	25	37	102	102	0	0	0	102	33	34
c	16	20	0	0	102	0	0	0	19	25
g	42	30	0	0	0	102	102	0	39	31
t	19	15	0	0	0	0	0	0	11	12
//
; Sites	102
>site_0
GGAACGGAAC
>site_1
CGAACGGAAC
>site_2
GCAACGGAGG
>site_3
GCAACGGATA
>site_4
CAAACGGAAC
>site_5
AAAACGGAGT
>site_6
CGAACGGAGG
>site_7
GGAACGGAAA
>site_8
CAAACGGAAA
>site_9
CGAACGGATT
>site_10
GAAACGGACG
>site_11
TTAACGGATA
>site_12
ATAACGGAAC
>site_13
TAAACGGACA
>site_14
TGAACGGAAA
>site_15
CAAACGGACA
>site_16
GGAACGGAGA
>site_17
CAAACGGAAA
>site_18
GGAACGGACG
>site_19
GGAACGGAAA
>site_20
GGAACGGAAC
>site_21
TAAACGGAGA
>site_22
AAAACGGACT
>site_23
CCAACGGAAC
>site_24
AAAACGGAAA
>site_25
TCAACGGATC
>site_26
GGAACGGACG
>site_27
ACAACGGACA
>site_28
AAAACGGAGC
>site_29
GTAACGGAAA
>site_30
ACAACGGATC
>site_31
GGAACGGAGC
>site_32
AAAACGGAAG
>site_33
GAAACGGAAG
>site_34
TCAACGGAGG
>site_35
GTAACGGACG
>site_36
TCAACGGATC
>site_37
TGAACGGAGG
>site_38
ATAACGGAGT
>site_39
TTAACGGACG
>site_40
TAAACGGAGG
>site_41
TCAACGGACT
>site_42
TCAACGGAAC
>site_43
GCAACGGACA
>site_44
GAAACGGACA
>site_45
TTAACGGAAG
>site_46
CAAACGGAAT
>site_47
TAAACGGAGA
>site_48
TGAACGGAGA
>site_49
ACAACGGACA
>site_50
CGAACGGAGC
>site_51
GTAACGGAGA
>site_52
TTAACGGACA
>site_53
AGAACGGAGA
>site_54
GAAACGGAGC
>site_55
CCAACGGAGG
>site_56
GTAACGGACG
>site_57
GAAACGGAGG
>site_58
CGAACGGAAC
>site_59
CTAACGGAGT
>site_60
AAAACGGAGA
>site_61
AGAACGGACC
>site_62
AGAACGGAAG
>site_63
GAAACGGAGG
>site_64
TGAACGGATC
>site_65
GAAACGGAGA
>site_66
GGAACGGAGT
>site_67
GGAACGGAGG
>site_68
AAAACGGAGC
>site_69
TAAACGGAAG
>site_70
CCAACGGAAC
>site_71
GTAACGGAGA
>site_72
GAAACGGAAT
>site_73
AAAACGGAGC
>site_74
GAAACGGAGA
>site_75
AAAACGGAGA
>site_76
GAAACGGAGA
>site_77
GGAACGGACG
>site_78
ACAACGGACA
>site_79
AGAACGGAAA
>site_80
CAAACGGAAG
>site_81
ACAACGGAAC
>site_82
AAAACGGAAA
>site_83
GGAACGGAGG
>site_84
GAAACGGAAG
>site_85
GGAACGGAGC
>site_86
GTAACGGATG
>site_87
GCAACGGAAA
>site_88
GAAACGGAAG
>site_89
ACAACGGAAA
>site_90
AAAACGGAGT
>site_91
GTAACGGAAC
>site_92
GTAACGGATC
>site_93
GGAACGGAGG
>site_94
TGAACGGAAG
>site_95
GAAACGGAGG
>site_96
GGAACGGAGT
>site_97
AAAACGGAGG
>site_98
ACAACGGACT
>site_99
GGAACGGATC
>site_100
CCAACGGAGA
>site_101
GAAACGGATG
; Host name	baobab.eead.csic.es
; Job started	2021-02-18.125433
; Job done	2021-02-18.125433
; Seconds	0.17
;	user	0.18
;	system	0.02
;	cuser	0
;	csystem	0