; convert-matrix  -v 1 -i W9/regulonW9.rm.fna.peaks-rm/results/dyads_test_vs_ctrl/peaks_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o W9/regulonW9.rm.fna.peaks-rm/results/dyads_test_vs_ctrl/peaks_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.txt
; Input files
;	input	W9/regulonW9.rm.fna.peaks-rm/results/dyads_test_vs_ctrl/peaks_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	W9/regulonW9.rm.fna.peaks-rm/results/dyads_test_vs_ctrl/peaks_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	5	4	1	14	0	17	0	1	0	1	1	0	0	4
c	6	5	14	1	16	0	17	0	16	0	0	2	6	2
g	2	4	2	2	1	0	0	16	0	16	15	1	8	6
t	4	4	0	0	0	0	0	0	1	0	1	14	3	5
//
; Sites	17
>site_0
TTCCCACGCGGTGG
>site_1
GCGACACGCGGTGC
>site_2
AGGACACGCGGTCG
>site_3
TTAACACGCGGTTT
>site_4
AGCAGACGCGGTGA
>site_5
ATCACACGCGGCGG
>site_6
CACACACGCGGTTT
>site_7
AGCGCACGCGGTCT
>site_8
CACACACACGGTCA
>site_9
ACCGCACGCGGTGG
>site_10
CCCACACGTGGTGG
>site_11
TACACACGCGATTC
>site_12
TACACACGCGTTCT
>site_13
CCCACACGCGGTGT
>site_14
CTCACACGCGGCCA
>site_15
GGCACACGCGGGGA
>site_16
CCCACACGCAGTCG
a	0	4	13	12	12	11	1	0	0	0	0	1	1	3
c	3	2	0	0	1	1	12	0	12	0	0	0	4	1
g	6	6	0	1	0	1	0	13	0	12	13	2	3	5
t	4	1	0	0	0	0	0	0	1	1	0	10	5	4
//
; Sites	13
>site_0
TGAAAACGCGGTTC
>site_1
TTAACACGCGGTTT
>site_2
GCAAAACGCGGAGT
>site_3
CAAAAAAGCGGTCT
>site_4
GGAAACCGCGGTTA
>site_5
TGAAAACGCTGTGG
>site_6
GAAAAACGCGGTTT
>site_7
GGAAAACGCGGTCG
>site_8
CAAAAACGCGGGCG
>site_9
TAAAAACGCGGGAG
>site_10
GCAAAACGTGGTCA
>site_11
CGAAAGCGCGGTTG
>site_12
GGAGAACGCGGTGA
a	20	19	54	0	0	1	1	0	1	3	11	21
c	30	30	13	95	92	1	91	0	0	73	28	30
g	27	25	14	0	0	92	2	95	0	16	36	26
t	18	21	14	0	3	1	1	0	94	3	20	18
//
; Sites	95
>site_0
CAGCCGCGTCAG
>site_1
CACCCGCGTCCA
>site_2
GAACCGCGTCTC
>site_3
GTACCCCGTCTG
>site_4
CGACCGGGTCGT
>site_5
CCACCGCGTGGG
>site_6
ACTCCGCGTCCC
>site_7
CGCCCGCGTCAA
>site_8
CTACTGCGTCAT
>site_9
ACACCGCGTCGC
>site_10
GCACCGCGTGTC
>site_11
GCACCGCGTGAC
>site_12
GAGCCGCGTCGG
>site_13
CGACCGCGTGTC
>site_14
CTCCCGCGTCGC
>site_15
AGCCCGCGTCGG
>site_16
CTACTGCGTCCA
>site_17
CTGCCGCGTCTT
>site_18
CGACCGCGTAGT
>site_19
CCACCGCGTCGT
>site_20
GTTCCGCGTCCG
>site_21
CCACTGCGTCAC
>site_22
TCACCGCGTCTG
>site_23
CCCCCGCGTCTC
>site_24
CGACCGCGTACT
>site_25
GGTCCGCGTCTT
>site_26
ATACCGCGTCGC
>site_27
CCTCCGCGTCCG
>site_28
ATACCGCGTCGG
>site_29
GTCCCGCGTCTG
>site_30
GGACCGAGTCCT
>site_31
GCGCCGCGTCTT
>site_32
TCGCCGCGTCCC
>site_33
TCTCCGCGTCTG
>site_34
AAACCGCGTCGC
>site_35
CAACCGCGTGGA
>site_36
AAACCGCGTCCG
>site_37
CCACCGCGTCCA
>site_38
GTACCGCGTGAC
>site_39
TGACCGCGTCCA
>site_40
AAACCGCGTCGC
>site_41
TAACCACGTCTA
>site_42
AAACCGCGTCCT
>site_43
GCACCGCGTGGA
>site_44
ACGCCGCGTCCG
>site_45
AAACCGCGTGTG
>site_46
GGACCGGGTCGG
>site_47
TCTCCGCGTCGC
>site_48
TGACCGCGTCGT
>site_49
GAACCGCGTCGA
>site_50
CCACCGCGTTCA
>site_51
ACACCGCGTCAA
>site_52
CCACCGCGTCCT
>site_53
AGACCGCGTGCG
>site_54
CGTCCGCGTCGC
>site_55
CCCCCGCGTCGC
>site_56
ATCCCGCGTCCC
>site_57
GCCCCGCGTCCC
>site_58
GTACCGCGTCGC
>site_59
AAACCGCGTGGC
>site_60
CAGCCGCGTCCA
>site_61
ACGCCGCGTCGG
>site_62
GATCCGCGTCCG
>site_63
CCACCGCGTGCG
>site_64
GTACCGCGTCCG
>site_65
CTACCTCGTCGT
>site_66
GGGCCGCGTCTT
>site_67
GAACCGCGTGAC
>site_68
TTACCGCGTCGA
>site_69
TTGCCGCGTCGG
>site_70
GTACCGCGTGCA
>site_71
ACACCGCGTGTG
>site_72
GTCCCGCGTCAA
>site_73
TGGCCGCGTCGA
>site_74
TGGCCGCGTCGG
>site_75
TATCCGCGTCAA
>site_76
CGTCCGCGTCTC
>site_77
GTACCGCGACGG
>site_78
CGTCCGCGTCTA
>site_79
CGGCCGCGTCGA
>site_80
ACACCGTGTCCG
>site_81
GTACCGCGTGGT
>site_82
AAACCGCGTATC
>site_83
AGACCGCGTCGC
>site_84
CGACCGCGTTGG
>site_85
GGTCCGCGTCTC
>site_86
CGCCCGCGTCCC
>site_87
GAACCGCGTCTC
>site_88
TCCCCGCGTCCA
>site_89
TCACCGCGTTCT
>site_90
TCTCCGCGTCCT
>site_91
GGACCGCGTGAC
>site_92
TGGCCGCGTCGT
>site_93
TTCCCGCGTCGA
>site_94
TCTCCGCGTCGC
a	2	6	0	21	0	25	0	3	1	6	0	22	7	5
c	11	11	25	2	25	0	26	1	25	1	25	2	9	8
g	8	6	1	2	0	1	0	22	0	19	0	2	9	10
t	5	3	0	1	1	0	0	0	0	0	1	0	1	3
//
; Sites	26
>site_0
ACGACACGCGCAGG
>site_1
CCCACACGCGTACC
>site_2
TACACACGCGCCAG
>site_3
CCCATACGCGCACC
>site_4
TTCTCACGCGCAAC
>site_5
GACACACCCGCAGA
>site_6
CCCACACGCGCGCG
>site_7
CGCACACGCACAGT
>site_8
GCCCCACGCGCAAG
>site_9
GTCACACACGCAGC
>site_10
GCCACACGAGCAAA
>site_11
GCCACGCGCGCAGC
>site_12
CACACACGCACATC
>site_13
AGCACACGCGCGCG
>site_14
TGCACACGCACACG
>site_15
CACGCACGCGCACG
>site_16
TGCGCACGCGCAGG
>site_17
GCCACACGCGCACG
>site_18
GACACACACGCACC
>site_19
CGCACACGCACAGC
>site_20
CGCACACGCGCCAA
>site_21
GCCACACGCCCAGT
>site_22
CTCACACGCACAAA
>site_23
CACACACGCACAGG
>site_24
TCCACACACGCACA
>site_25
CCCCCACGCGCAAT
a	17	18	0	68	0	0	0	68	0	15	9
c	22	17	68	0	68	0	68	0	68	22	24
g	17	24	0	0	0	68	0	0	0	29	24
t	12	9	0	0	0	0	0	0	0	2	11
//
; Sites	68
>site_0
AGCACGCACCG
>site_1
TCCACGCACGC
>site_2
CGCACGCACGC
>site_3
GGCACGCACCG
>site_4
CGCACGCACGT
>site_5
CCCACGCACCC
>site_6
GTCACGCACCC
>site_7
AGCACGCACGC
>site_8
CCCACGCACTG
>site_9
CGCACGCACGC
>site_10
CGCACGCACCG
>site_11
GTCACGCACCG
>site_12
AACACGCACGA
>site_13
GTCACGCACCT
>site_14
GACACGCACAC
>site_15
TACACGCACAC
>site_16
GACACGCACGG
>site_17
ACCACGCACCG
>site_18
CCCACGCACGA
>site_19
TGCACGCACAT
>site_20
GGCACGCACGC
>site_21
GGCACGCACGA
>site_22
CACACGCACAG
>site_23
TCCACGCACGC
>site_24
TGCACGCACAC
>site_25
ACCACGCACCC
>site_26
GCCACGCACGG
>site_27
GACACGCACCC
>site_28
ATCACGCACGT
>site_29
TGCACGCACGC
>site_30
TTCACGCACGC
>site_31
GGCACGCACGC
>site_32
ATCACGCACGT
>site_33
TCCACGCACCA
>site_34
GCCACGCACGC
>site_35
CACACGCACAT
>site_36
AGCACGCACCC
>site_37
CGCACGCACCG
>site_38
CACACGCACAC
>site_39
TCCACGCACGC
>site_40
AACACGCACAG
>site_41
AACACGCACAA
>site_42
AGCACGCACCT
>site_43
CGCACGCACAT
>site_44
CACACGCACCG
>site_45
ACCACGCACGC
>site_46
TACACGCACGG
>site_47
CACACGCACAG
>site_48
CGCACGCACCG
>site_49
GTCACGCACGG
>site_50
CACACGCACTC
>site_51
TCCACGCACCG
>site_52
CGCACGCACGG
>site_53
ACCACGCACCG
>site_54
GACACGCACGG
>site_55
AACACGCACGC
>site_56
GGCACGCACAG
>site_57
AGCACGCACGG
>site_58
CACACGCACAA
>site_59
CTCACGCACGA
>site_60
AGCACGCACAT
>site_61
CTCACGCACCT
>site_62
TCCACGCACGC
>site_63
CACACGCACAG
>site_64
CCCACGCACCA
>site_65
GGCACGCACCA
>site_66
GGCACGCACGG
>site_67
ACCACGCACCT
; Host name	baobab.eead.csic.es
; Job started	2021-02-18.131050
; Job done	2021-02-18.131050
; Seconds	0.17
;	user	0.17
;	system	0.02
;	cuser	0
;	csystem	0