; convert-matrix  -v 1 -i W9/regulonW9.rm.fna.peaks-rm/results/oligos_5-7nt/peaks_oligos-2str-noov_5-7nt_mvk2_2_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o W9/regulonW9.rm.fna.peaks-rm/results/oligos_5-7nt/peaks_oligos-2str-noov_5-7nt_mvk2_2_pssm_count_matrices.txt
; Input files
;	input	W9/regulonW9.rm.fna.peaks-rm/results/oligos_5-7nt/peaks_oligos-2str-noov_5-7nt_mvk2_2_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	W9/regulonW9.rm.fna.peaks-rm/results/oligos_5-7nt/peaks_oligos-2str-noov_5-7nt_mvk2_2_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	1	0	0	1	0	1	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	1	0	0
c	0	0	0	0	1	0	1	0	1	0	1	0	1	0	1	0	1	0	0	1	1	0	0	0
g	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	1
t	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0
//
; Sites	1
>site_0
AGGACACTCTCACACGCGGCCATG
a	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
c	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	1	0	0	0	0	1	0
g	0	0	0	0	0	1	1	0	1	0	0	0	1	0	1	1	0	0	1	0	0	0	0	0
t	1	1	0	0	0	0	0	0	0	1	0	1	0	1	0	0	1	0	0	1	1	1	0	0
//
; Sites	1
>site_0
TTAAAGGCGTCTGTGGTCGTTTCA
a	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
c	0	0	1	0	1	1	0	1	1	0	1	1	0	1	0	1	0	0	0	0	0	1	0	0
g	0	1	0	0	0	0	1	0	0	0	0	0	0	0	1	0	1	0	1	0	1	0	0	1
t	1	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	1	0	0	1	0
//
; Sites	1
>site_0
TGCTCCGCCTCCACGCGTGTGCTG
a	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
c	0	0	0	0	0	0	1	0	1	0	1	0	1	0	0	0	0	0	0	0	0	1	1	0
g	0	1	0	1	1	0	0	1	0	1	0	1	0	1	0	1	0	1	1	1	1	0	0	0
t	1	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	1
//
; Sites	1
>site_0
TGTGGACGCGCGCGTGTGGGGCCT
; Host name	baobab.eead.csic.es
; Job started	2021-02-18.131019
; Job done	2021-02-18.131019
; Seconds	0.17
;	user	0.17
;	system	0.02
;	cuser	0
;	csystem	0