Warning: Annotation table not found, skipped data/genomes/Escherichia_coli_GCF_000005845.2_ASM584v2/genome/start_codon.tab
Warning: Annotation table not found, skipped data/genomes/Escherichia_coli_GCF_000005845.2_ASM584v2/genome/stop_codon.tab
Warning: Annotation table not found, skipped data/genomes/Escherichia_coli_GCF_000005845.2_ASM584v2/genome/exon.tab
Information: Main index file tmp/apache/2018/03/21/footprint-discovery_Gammaproteobacteria_Escherichia_coli_GCF_000005845.2_ASM584v2_lexA_2018-03-21.142439_2018-03-21.142439_C9MNSJ/Gammaproteobacteria/Escherichia_coli_GCF_000005845.2_ASM584v2/Gammaproteobacteria_Escherichia_coli_GCF_000005845.2_ASM584v2_bg_taxfreq_result_index.html
Information: Main table file tmp/apache/2018/03/21/footprint-discovery_Gammaproteobacteria_Escherichia_coli_GCF_000005845.2_ASM584v2_lexA_2018-03-21.142439_2018-03-21.142439_C9MNSJ/Gammaproteobacteria/Escherichia_coli_GCF_000005845.2_ASM584v2/Gammaproteobacteria_Escherichia_coli_GCF_000005845.2_ASM584v2_bg_taxfreq_result_table.tab
TimeWarn: 2018-03-21.142505 Analyzing query 1/1 lexA lexA
TimeWarn: 2018-03-21.142748 Extracting sequences from pre-computed upstream sequences
; retrieve-seq-multigenome
; Input files
; input tmp/apache/2018/03/21/footprint-discovery_Gammaproteobacteria_Escherichia_coli_GCF_000005845.2_ASM584v2_lexA_2018-03-21.142439_2018-03-21.142439_C9MNSJ/Gammaproteobacteria/Escherichia_coli_GCF_000005845.2_ASM584v2/lexA/lexA_Escherichia_coli_GCF_000005845.2_ASM584v2_Gammaproteobacteria_taxfreq_ortho_bbh.tab
; Output files
; output tmp/apache/2018/03/21/footprint-discovery_Gammaproteobacteria_Escherichia_coli_GCF_000005845.2_ASM584v2_lexA_2018-03-21.142439_2018-03-21.142439_C9MNSJ/Gammaproteobacteria/Escherichia_coli_GCF_000005845.2_ASM584v2/lexA/lexA_Escherichia_coli_GCF_000005845.2_ASM584v2_Gammaproteobacteria_taxfreq_ortho_seq_notclean.fasta
; Orhologs found in 2589 organisms
; Host name sinik
; Job started 2018-03-21.142748
; Job done 2018-03-21.142930
; Seconds 0.46
; user 0.46
; system 2.75
; cuser 9.45
; csystem 8.24
TimeWarn: 2018-03-21.143159 Main index file tmp/apache/2018/03/21/footprint-discovery_Gammaproteobacteria_Escherichia_coli_GCF_000005845.2_ASM584v2_lexA_2018-03-21.142439_2018-03-21.142439_C9MNSJ/Gammaproteobacteria/Escherichia_coli_GCF_000005845.2_ASM584v2/Gammaproteobacteria_Escherichia_coli_GCF_000005845.2_ASM584v2_bg_taxfreq_result_index.html
TimeWarn: 2018-03-21.143159 Main log file tmp/apache/2018/03/21/footprint-discovery_Gammaproteobacteria_Escherichia_coli_GCF_000005845.2_ASM584v2_lexA_2018-03-21.142439_2018-03-21.142439_C9MNSJ/Gammaproteobacteria/Escherichia_coli_GCF_000005845.2_ASM584v2/Gammaproteobacteria_Escherichia_coli_GCF_000005845.2_ASM584v2_bg_taxfreq_log.txt