BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= HINF-KW2-01-000389 HI0410 transcriptional regulatory protein (tyrR) (318 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value HINF-KW2-01-000389 HI0410 transcriptional regulatory protein (t... 629 0.0 >HINF-KW2-01-000389 HI0410 transcriptional regulatory protein (tyrR) Length = 318 Score = 629 bits (1621), Expect = 0.0 Identities = 318/318 (100%), Positives = 318/318 (100%) Query: 1 MTISKFNPQKPFECFIVQSEAMKSAVENAKRFAMFDAPLLIQGETGSGKDLLAKACHYQS 60 MTISKFNPQKPFECFIVQSEAMKSAVENAKRFAMFDAPLLIQGETGSGKDLLAKACHYQS Sbjct: 1 MTISKFNPQKPFECFIVQSEAMKSAVENAKRFAMFDAPLLIQGETGSGKDLLAKACHYQS 60 Query: 61 LRRDKKFIAVNCAGLPDEDAESEMFGRKVGDSETIGFFEYANKGTVLLDGIAELSLSLQA 120 LRRDKKFIAVNCAGLPDEDAESEMFGRKVGDSETIGFFEYANKGTVLLDGIAELSLSLQA Sbjct: 61 LRRDKKFIAVNCAGLPDEDAESEMFGRKVGDSETIGFFEYANKGTVLLDGIAELSLSLQA 120 Query: 121 KLLRFLTDGSFRRVGEEKEHYANVRVICTSQVPLHLLVEQGKVRADLFHRLNVLTINVPA 180 KLLRFLTDGSFRRVGEEKEHYANVRVICTSQVPLHLLVEQGKVRADLFHRLNVLTINVPA Sbjct: 121 KLLRFLTDGSFRRVGEEKEHYANVRVICTSQVPLHLLVEQGKVRADLFHRLNVLTINVPA 180 Query: 181 LRDRMADIEPLAQGFLQEISEELKIAKPTFDKDFLLYLQKYDWKGNVRELYNTLYRACSL 240 LRDRMADIEPLAQGFLQEISEELKIAKPTFDKDFLLYLQKYDWKGNVRELYNTLYRACSL Sbjct: 181 LRDRMADIEPLAQGFLQEISEELKIAKPTFDKDFLLYLQKYDWKGNVRELYNTLYRACSL 240 Query: 241 VQDNHLTIESLNLALPQSAVISLDEFENKTLDEIIGFYEAQVLKLFYAEYPSTRKLAQRL 300 VQDNHLTIESLNLALPQSAVISLDEFENKTLDEIIGFYEAQVLKLFYAEYPSTRKLAQRL Sbjct: 241 VQDNHLTIESLNLALPQSAVISLDEFENKTLDEIIGFYEAQVLKLFYAEYPSTRKLAQRL 300 Query: 301 GVSHTAIANKLKQYGIGK 318 GVSHTAIANKLKQYGIGK Sbjct: 301 GVSHTAIANKLKQYGIGK 318 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.320 0.137 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 28,465 Number of Sequences: 78 Number of extensions: 1142 Number of successful extensions: 5 Number of sequences better than 1.0e-05: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 4 Number of HSP's gapped (non-prelim): 1 length of query: 318 length of database: 48,235 effective HSP length: 63 effective length of query: 255 effective length of database: 43,321 effective search space: 11046855 effective search space used: 11046855 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 92 (40.0 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator protein (narP) (208 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator pr... 396 e-113 SYNE-PCC-01-001575 slr0312 137 3e-35 SYNE-PCC-01-001160 sll1708 125 1e-31 SYNE-PCC-01-000608 sll0921 124 2e-31 SYNE-PCC-01-001075 sll1592 102 1e-24 SYNE-PCC-01-002731 slr1909 75 2e-16 SYNE-PCC-01-001039 sll1544 70 5e-15 SYNE-PCC-01-002635 slr1783 65 2e-13 SYNE-PCC-01-002672 slr1837 60 7e-12 SYNE-PCC-01-002486 slr1584 60 7e-12 SYNE-PCC-01-001306 sll1905 57 3e-11 SYNE-PCC-01-002489 slr1588 57 5e-11 SYNE-PCC-01-001461 slr0115 55 1e-10 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 55 1e-10 SYNE-PCC-01-000242 sll0396 54 4e-10 SYNE-PCC-01-000800 sll1228 52 2e-09 SYNE-PCC-01-002033 slr0947 51 2e-09 SYNE-PCC-01-000414 sll0649 51 3e-09 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 50 6e-09 SYNE-PCC-01-002951 ssl0564 49 9e-09 SYNE-PCC-01-001437 slr0081 49 2e-08 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 46 8e-08 SYNE-PCC-01-000511 sll0782 45 1e-07 SYNE-PCC-01-000518 sll0789 45 2e-07 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 44 3e-07 SYNE-PCC-01-002879 slr2104 44 4e-07 SYNE-PCC-01-002618 slr1760 44 4e-07 SYNE-PCC-01-000523 sll0797 44 5e-07 SYNE-PCC-01-002221 slr1213 43 9e-07 SYNE-PCC-01-002086 slr1042 43 9e-07 SYNE-PCC-01-002617 slr1759 41 3e-06 >HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator protein (narP) Length = 208 Score = 396 bits (1018), Expect = e-113 Identities = 208/208 (100%), Positives = 208/208 (100%) Query: 1 MQDKLKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNM 60 MQDKLKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNM Sbjct: 1 MQDKLKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNM 60 Query: 61 KGLSGLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKR 120 KGLSGLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKR Sbjct: 61 KGLSGLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKR 120 Query: 121 IAQGEVILSDSIKNLLLERTHEDNPLDSLTDREMGVLRQIATGLSNKQIAAQLFISEETV 180 IAQGEVILSDSIKNLLLERTHEDNPLDSLTDREMGVLRQIATGLSNKQIAAQLFISEETV Sbjct: 121 IAQGEVILSDSIKNLLLERTHEDNPLDSLTDREMGVLRQIATGLSNKQIAAQLFISEETV 180 Query: 181 KVHIRNLLRKLNVHSRVAATVLFFEQNR 208 KVHIRNLLRKLNVHSRVAATVLFFEQNR Sbjct: 181 KVHIRNLLRKLNVHSRVAATVLFFEQNR 208 >SYNE-PCC-01-001575 slr0312 Length = 209 Score = 137 bits (345), Expect = 3e-35 Identities = 73/198 (36%), Positives = 118/198 (59%), Gaps = 4/198 (2%) Query: 5 LKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLS 64 ++VL+ DDH + R+G+ ++ D + +V+A +G + I++ + PDV ++DL M + Sbjct: 7 IRVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPEVE 66 Query: 65 GLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRIAQG 124 G+ + + A ARI++LT D+ DIY + AGA GYLLK+TEPD LL I+ + +G Sbjct: 67 GVAAISAICAIVKFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHRG 126 Query: 125 EVILSDSIKNLLLERTHEDNPLDSLTDREMGVLRQIATGLSNKQIAAQLFISEETVKVHI 184 + + + L++R NP L++RE+ VL +A G+SN IA L I E TVK H+ Sbjct: 127 QKYIPPDVGAKLVQRL--SNP--ELSERELEVLGSLAQGMSNADIATALSIGEGTVKSHV 182 Query: 185 RNLLRKLNVHSRVAATVL 202 +L KL+V R A ++ Sbjct: 183 NRILNKLDVGDRTQAVIV 200 >SYNE-PCC-01-001160 sll1708 Length = 226 Score = 125 bits (314), Expect = 1e-31 Identities = 63/203 (31%), Positives = 113/203 (55%), Gaps = 5/203 (2%) Query: 5 LKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLS 64 +K+L+++D PLM+ G++Q + + FE++ V +G + A +PD+I++D+ + GL Sbjct: 17 MKILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPGLD 76 Query: 65 GLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRIAQG 124 G++ K ++ I++LT N+I + +GAD Y +K + L+ I G Sbjct: 77 GIEATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIAAAQDG 136 Query: 125 EVILSDSIKNLLLERTHEDNP-----LDSLTDREMGVLRQIATGLSNKQIAAQLFISEET 179 L I +++E P + SL++RE+ VL+ I G SN++IA L++S T Sbjct: 137 ATYLDPQIARVVVENLKPPVPEGQADVSSLSEREIDVLKLIVEGKSNQEIAQTLYLSTNT 196 Query: 180 VKVHIRNLLRKLNVHSRVAATVL 202 +K H+R ++ KL+V RV A V+ Sbjct: 197 IKTHVRGIMNKLSVDDRVQAAVI 219 >SYNE-PCC-01-000608 sll0921 Length = 222 Score = 124 bits (312), Expect = 2e-31 Identities = 67/212 (31%), Positives = 121/212 (57%), Gaps = 13/212 (6%) Query: 3 DKLKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKG 62 +K+++ LI+D L+R+G++ + ++ +FE V + ++G G+ + QT PDV+I+D+ + Sbjct: 2 EKIRIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPD 61 Query: 63 LSGLDTLKGLRAEGVD--ARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKR 120 ++G+D + L+ ++ R++ILT++D + + AGAD Y +KD+ + L+E I+ Sbjct: 62 MNGIDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQA 121 Query: 121 IAQGEVILSDSIKNLLLERTHEDNPLD-----------SLTDREMGVLRQIATGLSNKQI 169 G + +I ++L P + LT+RE+ VL+ I G SN I Sbjct: 122 THGGFAWIDPAIARIVLAHAPGAEPSEPSSPSRTSLSYGLTERELEVLQLIVDGCSNADI 181 Query: 170 AAQLFISEETVKVHIRNLLRKLNVHSRVAATV 201 A +L+I+ TVK H+RN+L KL + R A V Sbjct: 182 AEKLYITVGTVKTHVRNILNKLCANDRTQAAV 213 >SYNE-PCC-01-001075 sll1592 Length = 226 Score = 102 bits (253), Expect = 1e-24 Identities = 67/217 (30%), Positives = 109/217 (50%), Gaps = 18/217 (8%) Query: 5 LKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLS 64 +++LL++D L R G+ + + +V + G I+ Q DV+ILD+ + G+ Sbjct: 8 IRILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPGIG 67 Query: 65 GLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRIAQG 124 G++ ++ +LILT I LI+A A GY +K +TL+ I+ +A G Sbjct: 68 GIEACHQIKKIHPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLAIRSVAAG 127 Query: 125 ----EVILSDSIKN-----------LLLERTHEDNPLDSLTDREMGVLRQIATGLSNKQI 169 + I S I+ L L +NP LT RE+ +L +A G SN++I Sbjct: 128 AFWWDAIASQEIQTAFQHSSSTGAVLPLADADGENP---LTKRELEILSLVAKGKSNQEI 184 Query: 170 AAQLFISEETVKVHIRNLLRKLNVHSRVAATVLFFEQ 206 A +L+I+ TV+VH+ +LRKL V R A +L E+ Sbjct: 185 ADELYIAPGTVRVHVHTILRKLEVRDRTQAALLAIER 221 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 75.1 bits (183), Expect = 2e-16 Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 29/210 (13%) Query: 2 QDKLKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMK 61 ++ +LL+DD P + +K +E V +G E + + T PD+I+ D+ M Sbjct: 5 KENYHLLLVDDDPNLLLLVKDYLEYQGY--QVTTAGNGREALDLLTTTVPDMIVCDIMMP 62 Query: 62 GLSGLDTLKGLRAEGVDARILILTVSDAKNDIYTLI---DAGADGYLLKDTEPDTLLEQI 118 + G ++ +R + I ++ +S AK + + + GAD Y+ K EP+ L Q+ Sbjct: 63 EMDGYAFIEQVRQNPDISWIPVMFLS-AKGQSHNRVKGLNVGADIYMAKPFEPEELAAQV 121 Query: 119 KR-IAQGEVILSDSIKNLLLERTHEDNPLDS-----------LTDREMGVLRQIATGLSN 166 + + Q + +L H ++PL+ LT E V++ +A GL+N Sbjct: 122 QSCLRQADRLLQ-----------HNNHPLEDNARVQVARDVELTPTETKVIQLVAQGLAN 170 Query: 167 KQIAAQLFISEETVKVHIRNLLRKLNVHSR 196 ++IA L +S+ TV+ H+ N+L K +H+R Sbjct: 171 REIADHLKVSQRTVESHVSNMLNKTGLHNR 200 >SYNE-PCC-01-001039 sll1544 Length = 228 Score = 70.1 bits (170), Expect = 5e-15 Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 24/165 (14%) Query: 48 QTSPDVIILDLNMKGLSGLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLK 107 Q P V+++ ++ SGLD LK L+A + L+L ++D + GAD L+ Sbjct: 68 QPEPLVVVICQRLEDGSGLDLLKQLKAHARSPQCLLLLLNDHAAIVEEAQQYGADAIFLE 127 Query: 108 DTEPDTLLEQIKRIAQGEVILSDSIKNLLLERTHEDNPL-----------DSLTDREMGV 156 + + GE+ L+ ++ LL RT+ D+ L D LT RE+ + Sbjct: 128 SS-----------LGNGEINLA--VECLLQGRTYIDSRLEAIADYRKSQKDELTQREVAI 174 Query: 157 LRQIATGLSNKQIAAQLFISEETVKVHIRNLLRKLNVHSRVAATV 201 LR +A G +N +I +L ++ TV+ +++ ++RKLN R +A + Sbjct: 175 LRLVAEGKTNSEIGQELHLASSTVREYVQTIMRKLNARDRTSAAI 219 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 64.7 bits (156), Expect = 2e-13 Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 29/221 (13%) Query: 1 MQDKLKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNM 60 M + + +LL+DD P +R ++ +E +F+V ++ TE P ++I D+ M Sbjct: 52 MAEPISLLLVDDEPGVRESVQAFLEDSGDFKVDL-AANATEAWDYLQHHLPALVISDIMM 110 Query: 61 KGLSGLDTLKGLRAEGVDAR-----ILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLL 115 + G L+ LR DAR ++ LT D G D +L K +PD L Sbjct: 111 PQVDGYQFLQKLRE---DARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELE 167 Query: 116 EQIKRIAQGEVILSDS-IKNLLLERTHED------------------NPLD-SLTDREMG 155 ++ + + SD+ ++ L+ +++ +P+ T RE Sbjct: 168 AIVRNLLARQQASSDAGSESAKLQEIYQEIRALKEQIGQPSGIHTTPSPIKLDFTPREQS 227 Query: 156 VLRQIATGLSNKQIAAQLFISEETVKVHIRNLLRKLNVHSR 196 VL ++ GL NK+IAAQL S V+ ++ L K +SR Sbjct: 228 VLDLVSQGLMNKEIAAQLKTSVRNVEKYVSRLFTKTGTNSR 268 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 59.7 bits (143), Expect = 7e-12 Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 24/176 (13%) Query: 7 VLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLSGL 66 +LL+DD + + + + + VAD G G+++A+ D++ILD + +SGL Sbjct: 4 ILLVDDENALTEPLSKALGHQGHTIDVAD--QGKTGLAMAIAGQYDLLILDWMLPQVSGL 61 Query: 67 DTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQI----KRIA 122 + + +R G +L LT D +D +DAG D YL+K E LL ++ +R + Sbjct: 62 EICRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFELRELLARVRALLRRQS 121 Query: 123 QGEVILS--DSIKNLLLERTHEDNPLDSLTDREMGVLRQIA------TGLSNKQIA 170 GE I ++KN LL S+ + + V Q+A LS K++A Sbjct: 122 HGETITETLGAVKNNLL----------SVNNVSLDVANQVAYCQGQRIALSEKEVA 167 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 59.7 bits (143), Expect = 7e-12 Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 20/204 (9%) Query: 5 LKVLLI-DDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGL 63 +++LL+ DD PL + L + ++ D S + A + D++ILD+ + L Sbjct: 1 MRILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWD---YASRLEYDLVILDVMLPEL 57 Query: 64 SGLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRIAQ 123 G+ + R+ IL++T D ND T +DAGAD Y++K + L +++ + + Sbjct: 58 DGITLCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLR 117 Query: 124 GEVILSDSIKN----LLLERTHE---DNPLDSLTDREMGVLRQIATG----LSNKQIAAQ 172 + L T+E DN + SLT +E +L + LS I Sbjct: 118 RGCATCQPVLEWGPIRLDPSTYEVSYDNEVLSLTRKEYSILELLLRNGRRVLSRSMIIDS 177 Query: 173 LF-----ISEETVKVHIRNLLRKL 191 ++ E+TVKVH+R+L +KL Sbjct: 178 IWKLESPPEEDTVKVHVRSLRQKL 201 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 57.4 bits (137), Expect = 3e-11 Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 4/126 (3%) Query: 36 VSSGTEGISVALQTSPDVIILDLNMKGLSGLDTLKGLRAEGV--DARILILTVSDAKNDI 93 V+SG E + Q PD+I+LDL M G+ GL+ L+ + D ++ LT S+ K D+ Sbjct: 47 VTSGPEALQRVTQAQPDLILLDLMMPGMDGLEVCDRLKQDPQTRDIPVIFLTASNEKQDL 106 Query: 94 YTLIDAGADGYLLKDTEPDTLLEQIKRIAQGEVILSDSIKNLLLERTHEDNPLDSLTDRE 153 GA Y+ K P LL ++K + + D++ + LLE+ L + T Sbjct: 107 LQAFAKGAVDYVTKPFSPPELLARVKTHLELKQ-TRDNLHHTLLEQARTAEAL-ACTSTR 164 Query: 154 MGVLRQ 159 +G+L Q Sbjct: 165 LGILVQ 170 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 57.0 bits (136), Expect = 5e-11 Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 8/171 (4%) Query: 7 VLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLSGL 66 +L+++D ++R I + + L++ + A+ + G+ +L+ PD+II D+ M + G Sbjct: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 Query: 67 DTLKGLRAEGVDARI--LILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRIAQG 124 + L+ A I + LT D +++GAD YL+K + + LL + Q Sbjct: 64 GLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSRLQK 123 Query: 125 EVILS----DSIKNLLLERTHEDNPL--DSLTDREMGVLRQIATGLSNKQI 169 + LS SI + L ER + +LT E + R + GL+ Q+ Sbjct: 124 QAKLSAFYQGSISSSLTERPRRSGTIGTPTLTPDEAEIWRDLEVGLNTGQV 174 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 55.5 bits (132), Expect = 1e-10 Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 33/218 (15%) Query: 6 KVLLIDDHPLMRRGIKQLVELDDNFEVVA-DVSSGTEGI---SVALQTSPDVIILDLNMK 61 ++L+IDD P I LV + N E+ DV +GI ++A+Q PD+I+LDL + Sbjct: 3 RILIIDDDP----AISDLVSI--NLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLP 56 Query: 62 GLSGLDTLKGLRAEG--VDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIK 119 + G + LR + D +L+LT D D+GAD YL K + + +L +++ Sbjct: 57 KVDGFTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVR 116 Query: 120 RI----------AQGEVILSDSIKNLLLERTHED--NPLDSLTDREMGVLRQI----ATG 163 + A+ IL+ L+ ER LT E +L + Sbjct: 117 ALLRRTDRIPQAAKHSEILNQGPLTLVPERFEAIWFGKSIKLTHLEFELLHCLLQRHGQT 176 Query: 164 LSNKQIAAQLFISE-----ETVKVHIRNLLRKLNVHSR 196 +S I +++ E ET++VHIR+L KL + R Sbjct: 177 VSPSDILREVWGYEPDDDIETIRVHIRHLRTKLEPNPR 214 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 55.5 bits (132), Expect = 1e-10 Identities = 60/211 (28%), Positives = 91/211 (43%), Gaps = 34/211 (16%) Query: 5 LKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLS 64 +++LLI+D L+ G++ + L V + G G++ D ++LDL + L Sbjct: 1 MRILLIEDDNLIGNGLQ--IGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLD 58 Query: 65 GLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKR---- 120 GL+ L+ R+ D +LILT D ++ + +GAD YL K P L E R Sbjct: 59 GLEVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCK---PFALAEVAARLQAL 115 Query: 121 -----------IAQGEVILSDSIKNLLLERTHEDNPLDSLTDREMGVLRQIATG----LS 165 I Q V L + +++ L +N SLT RE +L LS Sbjct: 116 IRRRYGYHHSVIEQAGVKLDQNQRSVWL-----NNQPISLTSREYKLLELFMLNKDRVLS 170 Query: 166 NKQIAAQLF-----ISEETVKVHIRNLLRKL 191 I +L IS + VHI NL +KL Sbjct: 171 RSSIEEKLSSWDEEISSGALDVHIYNLRQKL 201 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 53.9 bits (128), Expect = 4e-10 Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 23/196 (11%) Query: 6 KVLLIDDHPLMRRGIKQLVELDDNFEV--VADVSSGTEGISVALQTSPDVIILDLNMKGL 63 +VL++++ + R +EL+ +E V+ G +G + A + PD+II++ + G+ Sbjct: 4 RVLVVEEEEKLAR----FMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGM 59 Query: 64 SGLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRIAQ 123 SGL+ + LR G I+++T D + +DAGAD Y++K D +I+ Sbjct: 60 SGLELCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIR---- 115 Query: 124 GEVILSDSIKNLLLERTH--EDNPLDSLTDREMGVLRQIATGLSNKQIAAQLFISEETVK 181 + L RTH D L R R+I G + A+ F + + Sbjct: 116 -----------VQLRRTHTTSDEVLQFADLRFNRSTREIQRGDRLIDLTAKEFELLDYLL 164 Query: 182 VHIRNLLRKLNVHSRV 197 H R +L + + RV Sbjct: 165 SHARQVLTREQILERV 180 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 51.6 bits (122), Expect = 2e-09 Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 4/112 (3%) Query: 6 KVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLSG 65 KVL++DD P R ++QL L VV + +G I++ P VI++D+ M L G Sbjct: 419 KVLVVDDRPESRLLLRQL--LTSLGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDG 476 Query: 66 LDTLKGLRA--EGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLL 115 T + ++A +G I+ LT S + + ++ AG D +L K P+ L+ Sbjct: 477 RSTTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELI 528 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 51.2 bits (121), Expect = 2e-09 Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 3/113 (2%) Query: 9 LIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLSGLDT 68 ++DD +RR ++ + + +EVV + G E I+ ++ PD+++LD+ M L G Sbjct: 1 MVDDEASIRRILETRLSMI-GYEVVT-AADGEEAIATFHESDPDLVVLDVMMPKLDGYGV 58 Query: 69 LKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRI 121 + LR E D I++LT D T ++ GAD Y++K P L +I+ + Sbjct: 59 CQELRKES-DIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSV 110 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 50.8 bits (120), Expect = 3e-09 Identities = 49/211 (23%), Positives = 87/211 (41%), Gaps = 29/211 (13%) Query: 7 VLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLSGL 66 +L+++D + + I++ +E + +V + G G+ + + PD+I+LDL + L GL Sbjct: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTN--DGETGLRIFQEQVPDLIVLDLMLPKLDGL 71 Query: 67 DTLKGLRAE--GVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRIAQG 124 + +R + D IL+LT + D + GAD YL+K P L+ +++ + + Sbjct: 72 EVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRALLRR 131 Query: 125 EVILSDSIKNLLLERTHEDNPLD---------------SLTDREMGVLRQI--------- 160 ++ + + H LD LT E +L Sbjct: 132 QLRQGQPV-GQIYRTNHFQVDLDQHQASRYQGDRQEELELTGLEFNLLATFMSYPGRVWN 190 Query: 161 ATGLSNKQIAAQLFISEETVKVHIRNLLRKL 191 T L K F E V HIR L +K+ Sbjct: 191 RTQLIEKLWGNDFFGDERVVDTHIRRLRKKI 221 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 50.1 bits (118), Expect = 6e-09 Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 29/209 (13%) Query: 6 KVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLSG 65 K+LL+DD + + L+EL+ F+V ++G E + L S +++LD+ M L+G Sbjct: 3 KLLLVDDDIELTELLSTLLELE-GFDVET-ANNGLEALQ-KLNESYKLVLLDVMMPKLNG 59 Query: 66 LDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRIAQGE 125 ++TLK +R + +++LT D ++ GAD L K L+ +IK I + Sbjct: 60 IETLKEIRKVS-NVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRRS 118 Query: 126 VILSDSIKN--------LLLERTH------EDNPLDSLTDREMGVLRQIATGLSNKQIAA 171 S++I N + L +H E+N +LTD E +L + N Sbjct: 119 ASPSNNISNVEILSFDGITLHFSHGIATYNEENL--NLTDYEFKILCLLLKSKGNVVSRE 176 Query: 172 QLFIS---------EETVKVHIRNLLRKL 191 +L + + ++ +HI NL RKL Sbjct: 177 ELSLEVMEKPLTPFDRSLDMHISNLRRKL 205 >SYNE-PCC-01-002951 ssl0564 Length = 89 Score = 49.3 bits (116), Expect = 9e-09 Identities = 23/53 (43%), Positives = 37/53 (69%) Query: 145 PLDSLTDREMGVLRQIATGLSNKQIAAQLFISEETVKVHIRNLLRKLNVHSRV 197 P SL+DRE+ +L +A GL+N++++ +L IS+ TV H+ N+L K N +RV Sbjct: 8 PPASLSDRELEILDLVAIGLTNQEVSERLEISKRTVDNHVSNILTKTNTENRV 60 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 48.5 bits (114), Expect = 2e-08 Identities = 34/122 (27%), Positives = 68/122 (55%), Gaps = 12/122 (9%) Query: 6 KVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVAL-------QTSPDVIILDL 58 ++L+++D +R I ++ ++ +EV A V G + +++ Q + D+IILD+ Sbjct: 32 RILVVEDEVSIRETIVLSLQ-EEGYEVYA-VDDGRDALALLQEFSEDPGQAAVDLIILDI 89 Query: 59 NMKGLSGLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQI 118 + ++GLD + LR G + ILI++ ++ + T ++ GAD Y+ T+P +L E + Sbjct: 90 MLPQVNGLDVCRSLRFGGDNTPILIVSAKGSEMEKVTGLEVGADDYI---TKPFSLKELV 146 Query: 119 KR 120 R Sbjct: 147 AR 148 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 46.2 bits (108), Expect = 8e-08 Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 5/118 (4%) Query: 6 KVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLSG 65 K+L+++D +R I L + V + S I+ ++ +P +I+LD + G SG Sbjct: 4 KILIVEDECAIREMIALF--LSQKYYDVIEASDFKTAIN-KIKENPKLILLDWMLPGRSG 60 Query: 66 LDTLKGLRAEGVDARI--LILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRI 121 + ++ ++ + A I ++LT + D ++AGAD Y+ K P LL +I+ + Sbjct: 61 IQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAV 118 >SYNE-PCC-01-000511 sll0782 Length = 369 Score = 45.4 bits (106), Expect = 1e-07 Identities = 22/51 (43%), Positives = 32/51 (62%) Query: 149 LTDREMGVLRQIATGLSNKQIAAQLFISEETVKVHIRNLLRKLNVHSRVAA 199 L++RE ++ +A GL ++ IA +L ISE TVK H+ L KLN +R A Sbjct: 309 LSEREKEIVSLLAQGLRDRDIAEELHISESTVKFHVNGTLHKLNAKNRYQA 359 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 45.1 bits (105), Expect = 2e-07 Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 4/119 (3%) Query: 5 LKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQ--TSPDVIILDLNMKG 62 +++LL++D P + +++ + ++ VV V G S Q + + I D + G Sbjct: 1 MRLLLVEDEPDLGMALEKALRRENY--VVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPG 58 Query: 63 LSGLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRI 121 LSGL+ + LR + IL+LT D D +DAGAD YL+K LL +++ + Sbjct: 59 LSGLELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAELLARLRSL 117 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 44.3 bits (103), Expect = 3e-07 Identities = 29/109 (26%), Positives = 58/109 (53%), Gaps = 3/109 (2%) Query: 6 KVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLSG 65 K+L+++D + R +K + E + ++V + +G E + + +++++D+N+ G +G Sbjct: 5 KILVVEDEIVTRNTLKGIFEAE-GYDVF-EAENGVEMHHILANHNINLVVMDINLPGKNG 62 Query: 66 LDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTL 114 L + LR E + ++ LT D + D ++ GAD YL K P L Sbjct: 63 LLLARELREE-LSLPLIFLTGRDNEVDKILGLEIGADDYLTKPFNPREL 110 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 43.9 bits (102), Expect = 4e-07 Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 4/114 (3%) Query: 7 VLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLSGL 66 +LL++D+ + R L+ VA+ +G E +++ + D I++D+ M L+G Sbjct: 720 ILLVEDNEINREFAHDLLTSKGLRVQVAN--NGQEALTLLTSNTYDAILMDIQMPMLNGY 777 Query: 67 DTLKGLRAEGVDAR--ILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQI 118 D + +R + I+ +T + D +DAG + +L K +PD L + + Sbjct: 778 DATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLFQTL 831 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 43.9 bits (102), Expect = 4e-07 Identities = 35/150 (23%), Positives = 72/150 (48%), Gaps = 5/150 (3%) Query: 6 KVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLSG 65 K+L++DD MR ++ ++ + + +A ++G E ++ + P+V++LD M + G Sbjct: 13 KILVVDDDGFMRMQLRVYLQKEGHRVELA--TNGEEALTKFAEIKPEVVLLDAVMPVMDG 70 Query: 66 LDTLKGLRA--EGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRIA- 122 + L + +L++T D + + +AGA Y+ K L +++KR+ Sbjct: 71 FACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLLY 130 Query: 123 QGEVILSDSIKNLLLERTHEDNPLDSLTDR 152 Q + N +LER + + L L +R Sbjct: 131 QNRLQHQLESVNQMLERLAKVDQLTQLANR 160 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 43.5 bits (101), Expect = 5e-07 Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 7/119 (5%) Query: 5 LKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQ--TSPDVIILDLNMKG 62 +++LL++D + IK+++ + VV V+ G++ T + I+D + G Sbjct: 1 MRILLVEDETDLGMAIKKVLVSEKY--VVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPG 58 Query: 63 LSGLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRI 121 LSGL+ + LR +G +L+LT + +DAGAD YL T+P + E + R+ Sbjct: 59 LSGLELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYL---TKPFVMAELLARL 114 >SYNE-PCC-01-002221 slr1213 Length = 241 Score = 42.7 bits (99), Expect = 9e-07 Identities = 26/114 (22%), Positives = 56/114 (49%), Gaps = 3/114 (2%) Query: 6 KVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKG-LS 64 K+L+++D L+ + I QL++ D +E+ S G + + PD+++LD+ +KG + Sbjct: 4 KILIVEDERLVAQHIAQLLK-SDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEID 62 Query: 65 GLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQI 118 G++ + +++ I+ LT + GY++K + LL + Sbjct: 63 GIEVAERIKSL-YSIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTV 115 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 42.7 bits (99), Expect = 9e-07 Identities = 29/117 (24%), Positives = 57/117 (48%), Gaps = 4/117 (3%) Query: 7 VLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLSGL 66 VLL++D R I + L D+ V G E + SPD+++LD+ M ++G Sbjct: 30 VLLVEDSSSQREMISGI--LKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGY 87 Query: 67 DTLKGLRAEGVDARILILTVSD--AKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRI 121 + + ++++ + ++ S + D + + GAD Y+ K +P L+ IK++ Sbjct: 88 EVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQL 144 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 41.2 bits (95), Expect = 3e-06 Identities = 30/126 (23%), Positives = 63/126 (50%), Gaps = 9/126 (7%) Query: 1 MQDKLKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNM 60 +Q L++LL +D+ + ++ Q+ L++ VA ++G E I + D++++D+ M Sbjct: 1186 LQPALQILLAEDNLVNQKVAHQM--LNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQM 1243 Query: 61 KGLSGLDTLKGLRAE---GVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQ 117 + G+ + +R RI+ +T + D +DAG DGY+ K + Q Sbjct: 1244 PVMDGITACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPIS----INQ 1299 Query: 118 IKRIAQ 123 ++++ Q Sbjct: 1300 LRKVLQ 1305 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.318 0.138 0.364 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,990 Number of Sequences: 78 Number of extensions: 797 Number of successful extensions: 55 Number of sequences better than 1.0e-05: 31 Number of HSP's better than 0.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 15 Number of HSP's that attempted gapping in prelim test: 22 Number of HSP's gapped (non-prelim): 33 length of query: 208 length of database: 48,235 effective HSP length: 59 effective length of query: 149 effective length of database: 43,633 effective search space: 6501317 effective search space used: 6501317 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 90 (39.3 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= HINF-KW2-01-000816 HI0837 response regulator (cpxR) (227 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value HINF-KW2-01-000816 HI0837 response regulator (cpxR) 382 e-109 SYNE-PCC-01-002033 slr0947 121 2e-30 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 118 2e-29 SYNE-PCC-01-000414 sll0649 108 1e-26 SYNE-PCC-01-001437 slr0081 108 1e-26 SYNE-PCC-01-001461 slr0115 107 3e-26 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 100 5e-24 SYNE-PCC-01-002672 slr1837 99 9e-24 SYNE-PCC-01-002486 slr1584 97 3e-23 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 96 1e-22 SYNE-PCC-01-000242 sll0396 91 3e-21 SYNE-PCC-01-002086 slr1042 87 3e-20 SYNE-PCC-01-002731 slr1909 82 1e-18 SYNE-PCC-01-000523 sll0797 82 2e-18 SYNE-PCC-01-000518 sll0789 82 2e-18 SYNE-PCC-01-002635 slr1783 68 3e-14 SYNE-PCC-01-000877 sll1330 68 3e-14 SYNE-PCC-01-002873 slr2098 66 8e-14 SYNE-PCC-01-001306 sll1905 65 2e-13 SYNE-PCC-01-002879 slr2104 62 2e-12 SYNE-PCC-01-002489 slr1588 61 3e-12 SYNE-PCC-01-001133 sll1673 61 4e-12 SYNE-PCC-01-002788 slr1982 55 2e-10 SYNE-PCC-01-001132 sll1672 55 2e-10 SYNE-PCC-01-002618 slr1760 55 3e-10 SYNE-PCC-01-000800 sll1228 52 1e-09 SYNE-PCC-01-002617 slr1759 51 4e-09 SYNE-PCC-01-002221 slr1213 47 7e-08 SYNE-PCC-01-001075 sll1592 44 6e-07 HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator pr... 40 8e-06 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 382 bits (980), Expect = e-109 Identities = 199/227 (87%), Positives = 199/227 (87%) Query: 1 MSKLLLVDDDIXXXXXXXXXXXXXGFDVETANNGLEALQKLNESYKLVLLDVMMPKLNGI 60 MSKLLLVDDDI GFDVETANNGLEALQKLNESYKLVLLDVMMPKLNGI Sbjct: 1 MSKLLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKLNESYKLVLLDVMMPKLNGI 60 Query: 61 ETLKEIRKVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRRSAS 120 ETLKEIRKVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRRSAS Sbjct: 61 ETLKEIRKVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRRSAS 120 Query: 121 PSNNISNVEILSFDGITLHFSHGIATYNEENLNLTDYEFKILCLLLKSKGNVVSREELSL 180 PSNNISNVEILSFDGITLHFSHGIATYNEENLNLTDYEFKILCLLLKSKGNVVSREELSL Sbjct: 121 PSNNISNVEILSFDGITLHFSHGIATYNEENLNLTDYEFKILCLLLKSKGNVVSREELSL 180 Query: 181 EVMEKPLTPFDRSLDMHIXXXXXXXXXXXXXXXWFKTLRGKGYALVT 227 EVMEKPLTPFDRSLDMHI WFKTLRGKGYALVT Sbjct: 181 EVMEKPLTPFDRSLDMHISNLRRKLPKRKNKPSWFKTLRGKGYALVT 227 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 121 bits (303), Expect = 2e-30 Identities = 82/222 (36%), Positives = 117/222 (52%), Gaps = 4/222 (1%) Query: 6 LVDDDIXXXXXXXXXXXXXGFDVETANNGLEALQKLNESYK-LVLLDVMMPKLNGIETLK 64 +VDD+ G++V TA +G EA+ +ES LV+LDVMMPKL+G + Sbjct: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 Query: 65 EIRKVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRR-SASPSN 123 E+RK S++P++MLTA G+ DR+ GLELGADD + KPF+ +EL ARI+++LRR + Sbjct: 61 ELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKNGMP 120 Query: 124 NISNVEILSFDGITLHFSHGIATYNEENLNLTDYEFKILCLLLKSKGNVVSREELSLEVM 183 I + +L I + + +E + LT EF +L LL+ G SR E+ EV Sbjct: 121 GIPSSGVLQIATIRIDTNKRQVYKGDERIRLTGMEFSLLELLVSRSGEPFSRSEILQEVW 180 Query: 184 -EKPLTPFD-RSLDMHIXXXXXXXXXXXXXXXWFKTLRGKGY 223 P D R +D+HI T RG GY Sbjct: 181 GYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGY 222 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 118 bits (295), Expect = 2e-29 Identities = 72/225 (32%), Positives = 116/225 (51%), Gaps = 4/225 (1%) Query: 3 KLLLVDDDIXXXXXXXXXXXXXGFDVETANNGLEALQKL-NESYKLVLLDVMMPKLNGIE 61 K+L+V+D+I G+DV A NG+E L N + LV++D+ +P NG+ Sbjct: 5 KILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGLL 64 Query: 62 TLKEIRKVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRRSA-- 119 +E+R+ ++P++ LT R ++D++LGLE+GADD L KPFN REL R + +L R+ Sbjct: 65 LARELREELSLPLIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHRAMPH 124 Query: 120 SPSNNISNVEILSFDGITLHF-SHGIATYNEENLNLTDYEFKILCLLLKSKGNVVSREEL 178 N E F+G L SH + T + L EF+ + ++ G + +REEL Sbjct: 125 QEKENTFGREFYRFNGWKLDLNSHSLITPEGQEFKLPRSEFRAMLHFCENPGKLQTREEL 184 Query: 179 SLEVMEKPLTPFDRSLDMHIXXXXXXXXXXXXXXXWFKTLRGKGY 223 ++ + L P DR++D+ I T+ G+GY Sbjct: 185 LKKMTGRELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGY 229 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 108 bits (271), Expect = 1e-26 Identities = 74/230 (32%), Positives = 113/230 (49%), Gaps = 8/230 (3%) Query: 1 MSKLLLVDDDIXXXXXXXXXXXXXGFDVETANNGLEALQKLNESYK-LVLLDVMMPKLNG 59 M +L+V+DD F N+G L+ E L++LD+M+PKL+G Sbjct: 11 MPNILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDG 70 Query: 60 IETLKEIRKV--SNVP-VMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILR 116 +E IR+ S P ++MLTA+GE+IDR++GL GADD L KPF+ REL+AR++A+LR Sbjct: 71 LEVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRALLR 130 Query: 117 RSASPSNNISNVEILSFDGITLHFSHGIATY---NEENLNLTDYEFKILCLLLKSKGNVV 173 R + + + + L H + Y +E L LT EF +L + G V Sbjct: 131 RQLRQGQPVGQIYRTNHFQVDLD-QHQASRYQGDRQEELELTGLEFNLLATFMSYPGRVW 189 Query: 174 SREELSLEVMEKPLTPFDRSLDMHIXXXXXXXXXXXXXXXWFKTLRGKGY 223 +R +L ++ +R +D HI + KT+ G GY Sbjct: 190 NRTQLIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGY 239 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 108 bits (270), Expect = 1e-26 Identities = 64/230 (27%), Positives = 120/230 (52%), Gaps = 11/230 (4%) Query: 3 KLLLVDDDIXXXXXXXXXXXXXGFDVETANNGLEALQKLNE--------SYKLVLLDVMM 54 ++L+V+D++ G++V ++G +AL L E + L++LD+M+ Sbjct: 32 RILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIML 91 Query: 55 PKLNGIETLKEIR-KVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKA 113 P++NG++ + +R N P+++++A+G ++++V GLE+GADD + KPF+ +EL+AR +A Sbjct: 92 PQVNGLDVCRSLRFGGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARCRA 151 Query: 114 ILRRSASPSNNISNVEILSFDGITLHFSHGIATYNEENLNLTDYEFKILCLLLKSKGNVV 173 ++RR NNI+ F + L+ E ++L EF++L L + V Sbjct: 152 MIRRQGLAGNNIA--PFRKFRDLVLYPQECRVLMRGEEVSLAPKEFRLLELFMSYPRRVW 209 Query: 174 SREELSLEVMEKPLTPFDRSLDMHIXXXXXXXXXXXXXXXWFKTLRGKGY 223 SRE+L + +++D+HI + T+RG GY Sbjct: 210 SREQLIEHIWGIDFMGDSKTVDVHIRWLREKLEQDPSQPEYLVTVRGFGY 259 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 107 bits (268), Expect = 3e-26 Identities = 70/230 (30%), Positives = 121/230 (52%), Gaps = 6/230 (2%) Query: 1 MSKLLLVDDDIXXXXXXXXXXXXXGFDVETANNGLEALQKLNESYK--LVLLDVMMPKLN 58 M ++L++DDD G+DV+ A +G++ Q L + L++LD+M+PK++ Sbjct: 1 MPRILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKG-QALAVQLQPDLIMLDLMLPKVD 59 Query: 59 GIETLKEIRK---VSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAIL 115 G + +R+ +++PV+MLTA G+ D++ G + GADD L KPF+ E++AR++A+L Sbjct: 60 GFTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALL 119 Query: 116 RRSASPSNNISNVEILSFDGITLHFSHGIATYNEENLNLTDYEFKILCLLLKSKGNVVSR 175 RR+ + EIL+ +TL A + +++ LT EF++L LL+ G VS Sbjct: 120 RRTDRIPQAAKHSEILNQGPLTLVPERFEAIWFGKSIKLTHLEFELLHCLLQRHGQTVSP 179 Query: 176 EELSLEVMEKPLTPFDRSLDMHIXXXXXXXXXXXXXXXWFKTLRGKGYAL 225 ++ EV ++ +HI + KT+ G GY L Sbjct: 180 SDILREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTVYGAGYCL 229 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 100 bits (248), Expect = 5e-24 Identities = 65/224 (29%), Positives = 114/224 (50%), Gaps = 9/224 (4%) Query: 3 KLLLVDDDIXXXXXXXXXXXXXGFDVETANNGLEALQKLNESYKLVLLDVMMPKLNGIET 62 K+L+V+D+ +DV A++ A+ K+ E+ KL+LLD M+P +GI+ Sbjct: 4 KILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKENPKLILLDWMLPGRSGIQF 63 Query: 63 LKEIRKVSN---VPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRRSA 119 ++ I+K + +P++MLTA+ + D + L GADD + KPF+ + L+ARI+A+ RR Sbjct: 64 IQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWRRIY 123 Query: 120 SPSNNISNVEILSFDGITLHFSHGIATYNEENLNLTDYEFKILCLLLKSKGNVVSREELS 179 + ++ LS D + ++ +NL+ EFK+L ++ V SRE+L Sbjct: 124 EQQSQFIQIDELSIDENAQR-----VFFQQQEINLSSTEFKLLHFFMRHPEKVYSREQLL 178 Query: 180 LEVMEKPLTPFDRSLDMHIXXXXXXXXXXXXXXXWFKTLRGKGY 223 + L R++D +I + +T+RG GY Sbjct: 179 NRIWHNDLEVEYRTVDSYI-RRLRRNLAPFQCEHYIQTVRGSGY 221 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 99.4 bits (246), Expect = 9e-24 Identities = 59/185 (31%), Positives = 103/185 (55%), Gaps = 7/185 (3%) Query: 1 MSKLLLVDDDIXXXXXXXXXXXXXGFDVETANNGLEAL-QKLNESYKLVLLDVMMPKLNG 59 M+ +LLVDD+ G ++ A+ G L + Y L++LD M+P+++G Sbjct: 1 MANILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSG 60 Query: 60 IETLKEIRKVSN-VPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRRS 118 +E ++IR + + PV+ LTA+ DRV GL+ G DD L KPF REL+AR++A+LRR Sbjct: 61 LEICRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFELRELLARVRALLRRQ 120 Query: 119 ASPSNNISNV-----EILSFDGITLHFSHGIATYNEENLNLTDYEFKILCLLLKSKGNVV 173 + + +LS + ++L ++ +A + + L++ E +L L L++ G ++ Sbjct: 121 SHGETITETLGAVKNNLLSVNNVSLDVANQVAYCQGQRIALSEKEVALLTLFLQAPGQIL 180 Query: 174 SREEL 178 S EE+ Sbjct: 181 SHEEI 185 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 97.4 bits (241), Expect = 3e-23 Identities = 68/225 (30%), Positives = 114/225 (50%), Gaps = 7/225 (3%) Query: 3 KLLLVDDDIXXXXXXXXXXXXXGFDVETANNGLEALQKLNE-SYKLVLLDVMMPKLNGIE 61 ++LLV+DD+ + V+ A + A + Y LV+LDVM+P+L+GI Sbjct: 2 RILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGIT 61 Query: 62 TLKEIRKVSNV-PVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRRSAS 120 ++ R S + P++M+TAR D++ GL+ GADD + KP + EL AR++A+LRR + Sbjct: 62 LCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRRGCA 121 Query: 121 PSNNISNVEILSFDGITLHFSHGIATYNEENLNLTDYEFKILCLLLKSKGNVVSREELSL 180 +L + I L S +Y+ E L+LT E+ IL LLL++ V+SR + Sbjct: 122 TCQ-----PVLEWGPIRLDPSTYEVSYDNEVLSLTRKEYSILELLLRNGRRVLSRSMIID 176 Query: 181 EVMEKPLTPFDRSLDMHIXXXXXXXXXXXXXXXWFKTLRGKGYAL 225 + + P + ++ +H+ +T+ G GY L Sbjct: 177 SIWKLESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGYRL 221 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 95.9 bits (237), Expect = 1e-22 Identities = 67/225 (29%), Positives = 114/225 (50%), Gaps = 12/225 (5%) Query: 3 KLLLVDDDIXXXXXXXXXXXXXGFDVETANNGLEALQKLNES-YKLVLLDVMMPKLNGIE 61 ++LL++DD GF V+ +G + L + Y V+LD+ +PKL+G+E Sbjct: 2 RILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLE 61 Query: 62 TLKEIRKV-SNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRRSAS 120 L++ R +VPV++LTAR +RV GL+ GADD L KPF E+ AR++A++RR Sbjct: 62 VLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRRYG 121 Query: 121 PSNNISNVEILSFDGITLHFSHGIATYNEENLNLTDYEFKILCLLLKSKGNVVSREELSL 180 ++ ++ G+ L + N + ++LT E+K+L L + +K V+SR + Sbjct: 122 YHHS-----VIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSRSSI-- 174 Query: 181 EVMEKPLTPFDRSLDMHIXXXXXXXXXXXXXXXWFKTLRGKGYAL 225 E+ L+ +D + + +T+ G GYAL Sbjct: 175 ---EEKLSSWDEEISSGALDVHIYNLRQKLGKQFIRTVHGVGYAL 216 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 90.9 bits (224), Expect = 3e-21 Identities = 60/225 (26%), Positives = 114/225 (50%), Gaps = 8/225 (3%) Query: 3 KLLLVDDDIXXXXXXXXXXXXXGFDVETANNGLEALQKLNE-SYKLVLLDVMMPKLNGIE 61 ++L+V+++ G+DV A +GL+ + E L++++ +P ++G+E Sbjct: 4 RVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLE 63 Query: 62 TLKEIRKV-SNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRRSAS 120 + +R++ S +P++++TA+ + +RV+GL+ GADD + KPFN E ARI+ LRR+ + Sbjct: 64 LCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRRTHT 123 Query: 121 PSNNISNVEILSFDGITLHFSHGIATYNEENLNLTDYEFKILCLLLKSKGNVVSREELSL 180 S+ + L F+ T G + ++LT EF++L LL V++RE++ Sbjct: 124 TSDEVLQFADLRFNRSTREIQRG-----DRLIDLTAKEFELLDYLLSHARQVLTREQILE 178 Query: 181 EVMEKPLTPFDRSLDMHIXXXXXXXXXXXXXXXWFKTLRGKGYAL 225 V ++++I +T+RG GY L Sbjct: 179 RVWGYDFMGDSNIIEVYIRYLRLKLEAAGEPRL-IQTVRGVGYVL 222 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 87.4 bits (215), Expect = 3e-20 Identities = 49/120 (40%), Positives = 72/120 (60%), Gaps = 4/120 (3%) Query: 1 MSKLLLVDDDIXXXXXXXXXXXXXGFDVETANNGLEALQKL-NESYKLVLLDVMMPKLNG 59 M+ +LLV+D G+ V A +G+EAL+KL N S LV+LD++MP++NG Sbjct: 27 MNAVLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNG 86 Query: 60 IETLKEIR---KVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILR 116 E + I+ K NVPV+M +++GE+ DR G+ GAD + KPF EL+ IK +LR Sbjct: 87 YEVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLLR 146 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 82.0 bits (201), Expect = 1e-18 Identities = 45/119 (37%), Positives = 73/119 (61%), Gaps = 4/119 (3%) Query: 4 LLLVDDDIXXXXXXXXXXXXXGFDVETANNGLEALQKLNESYK-LVLLDVMMPKLNGIET 62 LLLVDDD G+ V TA NG EAL L + +++ D+MMP+++G Sbjct: 10 LLLVDDDPNLLLLVKDYLEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAF 69 Query: 63 LKEIRK---VSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRRS 118 ++++R+ +S +PVM L+A+G+ +RV GL +GAD + KPF EL A++++ LR++ Sbjct: 70 IEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQA 128 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 81.6 bits (200), Expect = 2e-18 Identities = 57/189 (30%), Positives = 97/189 (51%), Gaps = 7/189 (3%) Query: 3 KLLLVDDDIXXXXXXXXXXXXXGFDVETANNGLEALQKLNES---YKLVLLDVMMPKLNG 59 ++LLV+D+ + V+ +G +A L Y L ++D ++P L+G Sbjct: 2 RILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSG 61 Query: 60 IETLKEIRKVSN-VPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRRS 118 +E +++R N +PV+MLTA GE +RV GL+ GADD L KPF EL+AR++A+ RRS Sbjct: 62 LELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAELLARLRALQRRS 121 Query: 119 ASPSNNISNVEILSFDGITLHFSHGIA---TYNEENLNLTDYEFKILCLLLKSKGNVVSR 175 I + S D S I+ + + LT EF+I L+++ ++S Sbjct: 122 PQFQPQILTLGNFSLDPSNNLLSVTISEPLNLERQEIALTVREFQIFQYLMQNPERIISG 181 Query: 176 EELSLEVME 184 ++ ++ + Sbjct: 182 SKIRQQLWD 190 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 81.6 bits (200), Expect = 2e-18 Identities = 55/180 (30%), Positives = 96/180 (53%), Gaps = 8/180 (4%) Query: 3 KLLLVDDDIXXXXXXXXXXXXXGFDVETANNGLEALQKLNE---SYKLVLLDVMMPKLNG 59 +LLLV+D+ + V+ +G A L++ +Y L + D M+P L+G Sbjct: 2 RLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSG 61 Query: 60 IETLKEIR-KVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRRS 118 +E +++R + S++P++MLTA+ + DRV GL+ GADD L KPF EL+AR++++ RRS Sbjct: 62 LELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAELLARLRSLQRRS 121 Query: 119 ASPSNNISNVEILSFDGITLHFSHGIATYNEENLNLTDYEFKILCLLLKSKGNVVSREEL 178 V D + + + T + + LT EF++L +K ++S E++ Sbjct: 122 PELQPQQLQVGQWWLD----YGTFAVVTPEQARITLTAKEFQLLEYFMKHPQQILSSEQI 177 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 67.8 bits (164), Expect = 3e-14 Identities = 45/125 (36%), Positives = 68/125 (54%), Gaps = 5/125 (4%) Query: 4 LLLVDDDIXXXXXXXXXXXXXG-FDVETANNGLEALQKLNESYK-LVLLDVMMPKLNGIE 61 LLLVDD+ G F V+ A N EA L LV+ D+MMP+++G + Sbjct: 58 LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGYQ 117 Query: 62 TLKEIR---KVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRRS 118 L+++R + ++PV+ LTARG DR+ G + G D L KPF+ EL A ++ +L R Sbjct: 118 FLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLARQ 177 Query: 119 ASPSN 123 + S+ Sbjct: 178 QASSD 182 >SYNE-PCC-01-000877 sll1330 Length = 250 Score = 67.8 bits (164), Expect = 3e-14 Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 6/200 (3%) Query: 25 GFDVETANNGLEALQKLNESYK-LVLLDVMMPKLNGIETLKEIRKVSNVPVMMLTARGED 83 G+ V+ + +A Q N L ++D + +GIE + + + + +L+A+ + Sbjct: 27 GYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGDGIELCRWLYQQHQSMIFILSAKDTE 86 Query: 84 IDRVLGLELGADDCLPKPFNDRELIARIKAILRRSASPSNNISNVEILSFDGITLHFSHG 143 D V GL+ GADD L KPF +E +ARI+ ++RR ++ +L + + + Sbjct: 87 KDIVHGLKAGADDYLTKPFGMQEFLARIECLIRR----VRTVAAPLLLDYGVLKIDLVQR 142 Query: 144 IATYNEENLNLTDYEFKILCLLLKSKGNVVSREELSLEVMEKPLTPFDRSLDMHIXXXXX 203 Y ++LT EF +L +L +++G+ +SR EL + + R++D H+ Sbjct: 143 RVEYQGNFVDLTPQEFSLLYVLTQAEGSALSRTELLRRAWPEAIDN-PRTIDTHVLSLRK 201 Query: 204 XXXXXXXXXXWFKTLRGKGY 223 +T+R GY Sbjct: 202 KIETDPRQPSLIQTVRNVGY 221 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 66.2 bits (160), Expect = 8e-14 Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 4/110 (3%) Query: 2 SKLLLVDDDIXXXXXXXXXXXXXGFDVETANNGLEALQKLNES-YKLVLLDVMMPKLNGI 60 +++LLV+D+ GF+V+ A NGL AL++LN + Y LVL+D+ MP+++GI Sbjct: 925 ARILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGI 984 Query: 61 ETLKEIR---KVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDREL 107 E IR + + +P++ +TA DR L+ G +D L KP EL Sbjct: 985 EATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEEL 1034 Score = 46.6 bits (109), Expect = 7e-08 Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 9/122 (7%) Query: 3 KLLLVDDDIXXXXXXXXXXXXXGFDVETANNGLEALQKL------NESYKLVLLDVMMPK 56 ++L+VDD+ F VET +G EAL L N + +V +D MP Sbjct: 772 RVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPN 831 Query: 57 LNGIETLKEIRKVS---NVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKA 113 ++G+E + ++ + + ++TA G + V LG DD L KP + L + Sbjct: 832 MDGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISPSVLFDSLAR 891 Query: 114 IL 115 +L Sbjct: 892 VL 893 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 65.1 bits (157), Expect = 2e-13 Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 4/124 (3%) Query: 4 LLLVDDDIXXXXXXXXXXXXXGFDVETANNGLEALQKLNESYK-LVLLDVMMPKLNGIET 62 +L+VDD G+ +G EALQ++ ++ L+LLD+MMP ++G+E Sbjct: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQPDLILLDLMMPGMDGLEV 79 Query: 63 ---LKEIRKVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRRSA 119 LK+ + ++PV+ LTA E D + GA D + KPF+ EL+AR+K L Sbjct: 80 CDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVKTHLELKQ 139 Query: 120 SPSN 123 + N Sbjct: 140 TRDN 143 Score = 48.9 bits (115), Expect = 1e-08 Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 5/103 (4%) Query: 4 LLLVDDDIXXXXXXXXXXXXXGFDVETANNGLEALQKLNES-YKLVLLDVMMPKLNGIET 62 +LL +D++ G+ V+ NNG EAL L + Y +VL+DV MP+++G+ Sbjct: 742 ILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTA 801 Query: 63 LKEIRKV---SNVP-VMMLTARGEDIDRVLGLELGADDCLPKP 101 + IR+ S P ++ +TA + DR L G +D + KP Sbjct: 802 TEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKP 844 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 61.6 bits (148), Expect = 2e-12 Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 11/145 (7%) Query: 2 SKLLLVDDDIXXXXXXXXXXXXXGFDVETANNGLEALQKL-NESYKLVLLDVMMPKLNGI 60 + +LLV+D+ G V+ ANNG EAL L + +Y +L+D+ MP LNG Sbjct: 718 ASILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGY 777 Query: 61 ETLKEIRKVS---NVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAIL-- 115 + + IR+ N+P++ +TA D+ L+ G +D L KP L + + Sbjct: 778 DATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLFQTLAHWIPP 837 Query: 116 ---RRSASPSNNISNVEILSFDGIT 137 R +PS+N+ LSF +T Sbjct: 838 NSAREKKNPSSNLK--ADLSFSSMT 860 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 61.2 bits (147), Expect = 3e-12 Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 6/128 (4%) Query: 1 MSKLLLVDDDIXXXXXXXXXXXXXGFDVETANNGLEALQKLNESY---KLVLLDVMMPKL 57 MS +L+V+D+ + + A NG AL LN L++ DVMMP++ Sbjct: 1 MSTILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEM 60 Query: 58 NG---IETLKEIRKVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAI 114 +G I L++ K + +P + LTA G D G+ GADD L KPF +L+ + + Sbjct: 61 DGHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSR 120 Query: 115 LRRSASPS 122 L++ A S Sbjct: 121 LQKQAKLS 128 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 60.8 bits (146), Expect = 4e-12 Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 4/113 (3%) Query: 4 LLLVDDDIXXXXXXXXXXXXXGFDVETANNGLEALQKLN-ESYKLVLLDVMMPKLNGIET 62 +LLVDD G+ V + +G AL+ L + L+LLD+ MP ++G + Sbjct: 11 ILLVDDLPNNLQLLSDLLINLGYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQV 70 Query: 63 LKEIRK---VSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIK 112 + I+K + ++P++ ++A G+ D+V E G D + KPF E++ARI+ Sbjct: 71 CEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQIEEVVARIE 123 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 55.1 bits (131), Expect = 2e-10 Identities = 33/119 (27%), Positives = 66/119 (55%), Gaps = 4/119 (3%) Query: 1 MSKLLLVDDDIXXXXXXXXXXXXXGFDVETANNGLEAL-QKLNESYKLVLLDVMMPKLNG 59 M+K+LLV+D+ G++V A +G +A+ ++ES +L+L+D+ +P ++G Sbjct: 4 MAKVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDG 63 Query: 60 IETLKEIR---KVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAIL 115 K+I+ +++P++ LTA DR + G DD KP + L+ +++A++ Sbjct: 64 WTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEALI 122 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 55.1 bits (131), Expect = 2e-10 Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 6/110 (5%) Query: 3 KLLLVDDDIXXXXXXXXXXXXXGFDVETANNGLEALQKLNESYK--LVLLDVMMPKLNGI 60 K+L+VDD GF++E A+NG EA+ L ES++ L+ +D+ MP ++G Sbjct: 631 KILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIA-LWESWEPHLIFMDMRMPVMDGY 689 Query: 61 ETLKEIR---KVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDREL 107 E K I+ K + V+ LTA + ++ + L G DD L KPF + + Sbjct: 690 EATKYIKGQVKGNATAVVALTASVLEEEKAIVLSAGCDDFLRKPFRENTI 739 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 54.7 bits (130), Expect = 3e-10 Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 4/118 (3%) Query: 2 SKLLLVDDDIXXXXXXXXXXXXXGFDVETANNGLEALQKLNE-SYKLVLLDVMMPKLNGI 60 +K+L+VDDD G VE A NG EAL K E ++VLLD +MP ++G Sbjct: 12 AKILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGF 71 Query: 61 ETLKEIRKVSNVP---VMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAIL 115 + + K+ P V+M+T ++ E GA D + KP + L R+K +L Sbjct: 72 ACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLL 129 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 52.4 bits (124), Expect = 1e-09 Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 6/112 (5%) Query: 3 KLLLVDDDIXXXXXXXXXXXXXGFDVETANNGLEALQKLNESY--KLVLLDVMMPKLNGI 60 K+L+VDD GF V+ A NG A+ L ES+ +++L+D+ MP L+G Sbjct: 419 KVLVVDDRPESRLLLRQLLTSLGFVVQEAENGEMAIA-LWESWHPQVILMDMQMPVLDGR 477 Query: 61 ETLKEIR---KVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIA 109 T ++I+ + + ++ LTA + +R L G DD L KPF ELIA Sbjct: 478 STTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIA 529 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 50.8 bits (120), Expect = 4e-09 Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 5/110 (4%) Query: 3 KLLLVDDDIXXXXXXXXXXXXXGFDVETANNGLEALQKLNES-YKLVLLDVMMPKLNGIE 61 ++LL +D++ G+ V ANNG E + L + Y LVL+D+ MP ++GI Sbjct: 1191 QILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGIT 1250 Query: 62 TLKEIRKVSNVP----VMMLTARGEDIDRVLGLELGADDCLPKPFNDREL 107 + IR+ + ++ +TA DR L+ G D + KP + +L Sbjct: 1251 ACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQL 1300 >SYNE-PCC-01-002221 slr1213 Length = 241 Score = 46.6 bits (109), Expect = 7e-08 Identities = 32/116 (27%), Positives = 65/116 (56%), Gaps = 7/116 (6%) Query: 1 MSKLLLVDDDIXXXXXXXXXXXXXGFDV-ETANNGLEALQKLNESYK-LVLLDVMMP-KL 57 ++K+L+V+D+ G+++ A++G AL+K+ E Y LVLLD+ + ++ Sbjct: 2 VTKILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEI 61 Query: 58 NGIETLKEIRKVSNVPVMMLTA--RGEDIDRVLGLELGADDCLPKPFNDRELIARI 111 +GIE + I+ + ++P++ LTA GE ++R + + KPF +L++ + Sbjct: 62 DGIEVAERIKSLYSIPIVYLTAFSDGETLER--AQKTNPQGYVIKPFRREQLLSTV 115 >SYNE-PCC-01-001075 sll1592 Length = 226 Score = 43.5 bits (101), Expect = 6e-07 Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 17/185 (9%) Query: 4 LLLVDDDIXXXXXXXXXXXXXGFDVE-TANNGLEALQKLNES-YKLVLLDVMMPKLNGIE 61 LL+ DD++ G DV A +G A+ +N+ + +V+LDV +P + GIE Sbjct: 11 LLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPGIGGIE 70 Query: 62 TLKEIRKV-SNVPVMMLTARGED--IDRVLGLELGADDCLPKPFNDRELIARIKAILRRS 118 +I+K+ +PV++LT+ + I+R+ +E A K L+ I+++ + Sbjct: 71 ACHQIKKIHPQLPVLILTSHSQPALINRL--IEAQAQGYCVKGVAAETLVLAIRSVAAGA 128 Query: 119 ----ASPSNNISNV-EILSFDGITLHFSHGIATYNEENLNLTDYEFKILCLLLKSKGNVV 173 A S I + S G L +A + EN LT E +IL L+ K K N Sbjct: 129 FWWDAIASQEIQTAFQHSSSTGAVL----PLADADGEN-PLTKRELEILSLVAKGKSNQE 183 Query: 174 SREEL 178 +EL Sbjct: 184 IADEL 188 >HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator protein (narP) Length = 208 Score = 39.7 bits (91), Expect = 8e-06 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 3/103 (2%) Query: 27 DVETANNGLEALQKLNESYKLVLLDVMMPKLNGIETLKEIRKVS-NVPVMMLTARGEDID 85 DV + G+ L S +++LD+ M L+G++TLK +R + +++LT D Sbjct: 35 DVSSGTEGISVA--LQTSPDVIILDLNMKGLSGLDTLKGLRAEGVDARILILTVSDAKND 92 Query: 86 RVLGLELGADDCLPKPFNDRELIARIKAILRRSASPSNNISNV 128 ++ GAD L K L+ +IK I + S++I N+ Sbjct: 93 IYTLIDAGADGYLLKDTEPDTLLEQIKRIAQGEVILSDSIKNL 135 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.319 0.139 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,567 Number of Sequences: 78 Number of extensions: 892 Number of successful extensions: 86 Number of sequences better than 1.0e-05: 30 Number of HSP's better than 0.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 19 Number of HSP's gapped (non-prelim): 33 length of query: 227 length of database: 48,235 effective HSP length: 60 effective length of query: 167 effective length of database: 43,555 effective search space: 7273685 effective search space used: 7273685 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 91 (39.7 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) (236 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 452 e-130 SYNE-PCC-01-000414 sll0649 126 5e-32 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 125 1e-31 SYNE-PCC-01-001437 slr0081 120 5e-30 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 105 1e-25 SYNE-PCC-01-002033 slr0947 99 2e-23 SYNE-PCC-01-000518 sll0789 94 3e-22 SYNE-PCC-01-001461 slr0115 94 5e-22 SYNE-PCC-01-002672 slr1837 92 1e-21 SYNE-PCC-01-000523 sll0797 82 1e-18 SYNE-PCC-01-000242 sll0396 82 2e-18 SYNE-PCC-01-002486 slr1584 79 2e-17 SYNE-PCC-01-000877 sll1330 78 3e-17 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 66 1e-13 SYNE-PCC-01-002086 slr1042 61 4e-12 SYNE-PCC-01-002635 slr1783 58 2e-11 SYNE-PCC-01-002731 slr1909 57 4e-11 SYNE-PCC-01-002489 slr1588 57 4e-11 SYNE-PCC-01-000800 sll1228 54 6e-10 SYNE-PCC-01-001132 sll1672 52 2e-09 SYNE-PCC-01-001306 sll1905 51 3e-09 SYNE-PCC-01-002618 slr1760 48 2e-08 SYNE-PCC-01-001575 slr0312 48 2e-08 SYNE-PCC-01-002879 slr2104 48 3e-08 SYNE-PCC-01-002873 slr2098 43 1e-06 SYNE-PCC-01-002788 slr1982 43 1e-06 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 452 bits (1163), Expect = e-130 Identities = 221/236 (93%), Positives = 221/236 (93%) Query: 1 MTTPKILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGK 60 MTTPKILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGK Sbjct: 1 MTTPKILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGK 60 Query: 61 NGXXXXXXXXXXXXXXXIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHR 120 NG IFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHR Sbjct: 61 NGLLLARELREELSLPLIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHR 120 Query: 121 AMPHQEKENTFGREFYRFNGWKLDLNSHSLITPEGQEFKLPRSEFRAMLHFCENPGKLQT 180 AMPHQEKENTFGREFYRFNGWKLDLNSHSLITPEGQEFKLPRSEFRAMLHFCENPGKLQT Sbjct: 121 AMPHQEKENTFGREFYRFNGWKLDLNSHSLITPEGQEFKLPRSEFRAMLHFCENPGKLQT 180 Query: 181 REELLKKMTGRELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGYRFCGDIE 236 REELLKKMTGRELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGYRFCGDIE Sbjct: 181 REELLKKMTGRELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGYRFCGDIE 236 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 126 bits (317), Expect = 5e-32 Identities = 76/234 (32%), Positives = 115/234 (49%), Gaps = 10/234 (4%) Query: 4 PKILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGX 63 P IL+VED+ ++ E E + +G I +L+V+D+ LP +G Sbjct: 12 PNILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGL 71 Query: 64 XXXXXXXXXXXXXX---IFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHR 120 + LT + E+D+I+GL GADDYL KPF+PREL R R LL R Sbjct: 72 EVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRALLRR 131 Query: 121 AMPHQEKENTFGREFYRFNGWKLDLNSHSLITPEG---QEFKLPRSEFRAMLHFCENPGK 177 + + + YR N +++DL+ H +G +E +L EF + F PG+ Sbjct: 132 QLRQGQPVG----QIYRTNHFQVDLDQHQASRYQGDRQEELELTGLEFNLLATFMSYPGR 187 Query: 178 LQTREELLKKMTGRELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGYRF 231 + R +L++K+ G + +R VD IRR+RK E P P I T+ G GY+F Sbjct: 188 VWNRTQLIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGYKF 241 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 125 bits (314), Expect = 1e-31 Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 4/225 (1%) Query: 5 KILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGXX 64 K+L+V+D+I L + E EG+DV A NG+E L N + LV++D+ +P NG Sbjct: 3 KLLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKL-NESYKLVLLDVMMPKLNGIE 61 Query: 65 XXXXXXXXXXXXXIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHRAMPH 124 + LT R ++D++LGLE+GADD L KPFN REL R + +L R+ Sbjct: 62 TLKEIRKVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRRSA-- 119 Query: 125 QEKENTFGREFYRFNGWKLDLNSHSLITPEGQEFKLPRSEFRAMLHFCENPGKLQTREEL 184 N E F+G L SH + T + L EF+ + ++ G + +REEL Sbjct: 120 SPSNNISNVEILSFDGITLHF-SHGIATYNEENLNLTDYEFKILCLLLKSKGNVVSREEL 178 Query: 185 LKKMTGRELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGY 229 ++ + L P DR++D+ I +R+ N P+ T+ G+GY Sbjct: 179 SLEVMEKPLTPFDRSLDMHISNLRRKLPKRKNKPSWFKTLRGKGY 223 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 120 bits (300), Expect = 5e-30 Identities = 74/238 (31%), Positives = 124/238 (52%), Gaps = 19/238 (7%) Query: 5 KILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHN-------INLVVMDINL 57 +ILVVEDE+ R T+ + EGY+V+ ++G + +L + ++L+++DI L Sbjct: 32 RILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIML 91 Query: 58 PGKNGXXXXXXXXXXXXXXXIFL-TGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARN 116 P NG I + + + +E++K+ GLE+GADDY+TKPF+ +EL R R Sbjct: 92 PQVNGLDVCRSLRFGGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARCRA 151 Query: 117 LLHRAMPHQEKENTFGREFYRFNGWKLDL---NSHSLITPEGQEFKLPRSEFRAMLHFCE 173 ++ R + G F ++ DL + G+E L EFR + F Sbjct: 152 MIRR-------QGLAGNNIAPFRKFR-DLVLYPQECRVLMRGEEVSLAPKEFRLLELFMS 203 Query: 174 NPGKLQTREELLKKMTGRELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGYRF 231 P ++ +RE+L++ + G + +TVDV IR +R+ E P+ P ++T+ G GYRF Sbjct: 204 YPRRVWSREQLIEHIWGIDFMGDSKTVDVHIRWLREKLEQDPSQPEYLVTVRGFGYRF 261 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 105 bits (262), Expect = 1e-25 Identities = 73/232 (31%), Positives = 113/232 (48%), Gaps = 13/232 (5%) Query: 3 TPKILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNG 62 T KIL+VEDE R + + YDV EA + + + N L+++D LPG++G Sbjct: 2 TRKILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKI-KENPKLILLDWMLPGRSG 60 Query: 63 XXXXXXXXXXXXXXXI---FLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLH 119 I LT + E D I L GADDY+TKPF+P+ L R + Sbjct: 61 IQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWR 120 Query: 120 RAMPHQEKENTFGREFYRFNGWKLDLNSHSLITPEGQEFKLPRSEFRAMLHFCENPGKLQ 179 R Q +F + + +D N+ + + QE L +EF+ + F +P K+ Sbjct: 121 RIYEQQS-------QFIQIDELSIDENAQRVFFQQ-QEINLSSTEFKLLHFFMRHPEKVY 172 Query: 180 TREELLKKMTGRELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGYRF 231 +RE+LL ++ +L+ + RTVD IRR+R++ + I T+ G GYRF Sbjct: 173 SREQLLNRIWHNDLEVEYRTVDSYIRRLRRNLAPF-QCEHYIQTVRGSGYRF 223 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 98.6 bits (244), Expect = 2e-23 Identities = 69/230 (30%), Positives = 107/230 (46%), Gaps = 12/230 (5%) Query: 8 VVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGXXXXX 67 +V+DE R L+ GY+V A +G E + +LVV+D+ +P +G Sbjct: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 Query: 68 XXXXXXXXXXIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHR----AMP 123 I LT + D+I GLE+GADDY+ KPF+P+EL R R++L R MP Sbjct: 61 ELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKNGMP 120 Query: 124 HQEKENTFGREFYRFNGWKLDLNSHSLITPEGQEFKLPRSEFRAMLHFCENPGKLQTREE 183 + ++D N + + + +L EF + G+ +R E Sbjct: 121 GIPSSGVL-----QIATIRIDTNKRQVYKGD-ERIRLTGMEFSLLELLVSRSGEPFSRSE 174 Query: 184 LLKKMTG--RELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGYRF 231 +L+++ G E R VDV I R+R E+ P+ P +I+T G GY F Sbjct: 175 ILQEVWGYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGYLF 224 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 94.4 bits (233), Expect = 3e-22 Identities = 65/230 (28%), Positives = 110/230 (47%), Gaps = 11/230 (4%) Query: 5 KILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNIN--LVVMDINLPGKNG 62 ++L+VEDE L+ E Y V ++G L +N L + D +PG +G Sbjct: 2 RLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSG 61 Query: 63 XXXXXXXXXXXXXXXIF-LTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHRA 121 I LT +D D++ GL+ GADDYL KPF EL R R+L R+ Sbjct: 62 LELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAELLARLRSLQRRS 121 Query: 122 MPHQEKENTFGREFYRFNGWKLDLNSHSLITPEGQEFKLPRSEFRAMLHFCENPGKLQTR 181 Q ++ G+ W LD + +++TPE L EF+ + +F ++P ++ + Sbjct: 122 PELQPQQLQVGQ-------WWLDYGTFAVVTPEQARITLTAKEFQLLEYFMKHPQQILSS 174 Query: 182 EELLKKMTGRELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGYRF 231 E++ ++ + V +R +R+ E++ + N+I T++G GYRF Sbjct: 175 EQIKNQLWALSAESTSNVVAAQVRLLRRKLEEYSH-GNLIETVYGLGYRF 223 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 93.6 bits (231), Expect = 5e-22 Identities = 68/239 (28%), Positives = 107/239 (44%), Gaps = 26/239 (10%) Query: 4 PKILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGX 63 P+IL+++D+ + + E GYDV +A +G++ + +L+++D+ LP +G Sbjct: 2 PRILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGF 61 Query: 64 XXXXXXXXXXXXXXI---FLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHR 120 I LT DKI G + GADDYLTKPF+ E+ R R LL R Sbjct: 62 TVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLRR 121 Query: 121 A--MPHQEKENTFGREFYRFNGWKLDLNSHSL-ITPE-------GQEFKLPRSEFRAMLH 170 +P K + LN L + PE G+ KL EF + Sbjct: 122 TDRIPQAAKHSEI-------------LNQGPLTLVPERFEAIWFGKSIKLTHLEFELLHC 168 Query: 171 FCENPGKLQTREELLKKMTGRELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGY 229 + G+ + ++L+++ G E T+ V IR +R E +P P I T++G GY Sbjct: 169 LLQRHGQTVSPSDILREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTVYGAGY 227 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 92.0 bits (227), Expect = 1e-21 Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 6/230 (2%) Query: 6 ILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGXXX 65 IL+V+DE L +G+ + A+ G + +L+++D LP +G Sbjct: 4 ILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGLEI 63 Query: 66 XXXXXXXXXXXXI-FLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHRAMPH 124 + FLT +D D++ GL+ G DDYL KPF REL R R LL R Sbjct: 64 CRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFELRELLARVRALLRRQSHG 123 Query: 125 QEKENTFG---REFYRFNGWKLDLNSHSLITPEGQEFKLPRSEFRAMLHFCENPGKLQTR 181 + T G N LD+ ++ + +GQ L E + F + PG++ + Sbjct: 124 ETITETLGAVKNNLLSVNNVSLDV-ANQVAYCQGQRIALSEKEVALLTLFLQAPGQILSH 182 Query: 182 EELLKKMTGRELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGYRF 231 EE+ + E P + +R +R+ E PN P +I +++G+GY F Sbjct: 183 EEIYSHLWPGESPPSSNVLAALVRLLRRKIE-QPNAPRLINSVYGKGYCF 231 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 82.4 bits (202), Expect = 1e-18 Identities = 65/230 (28%), Positives = 102/230 (44%), Gaps = 4/230 (1%) Query: 5 KILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANH--NINLVVMDINLPGKNG 62 +IL+VEDE +K + +E Y V +G + L N L ++D LPG +G Sbjct: 2 RILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSG 61 Query: 63 XXXXXXXXXXXXXXXIF-LTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHRA 121 + LT +++ GL+ GADDYLTKPF EL R R L R+ Sbjct: 62 LELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAELLARLRALQRRS 121 Query: 122 MPHQEKENTFGREFYRFNGWKLDLNSHSLITPEGQEFKLPRSEFRAMLHFCENPGKLQTR 181 Q + T G + L + + E QE L EF+ + +NP ++ + Sbjct: 122 PQFQPQILTLGNFSLDPSNNLLSVTISEPLNLERQEIALTVREFQIFQYLMQNPERIISG 181 Query: 182 EELLKKMTGRELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGYRF 231 ++ +++ + +P V +R IR+ N P I T+ G+GYRF Sbjct: 182 SKIRQQLWDLDEEPMSNVVAAQMRLIRRKLAQQ-NCPCPIKTVPGQGYRF 230 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 82.0 bits (201), Expect = 2e-18 Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 10/226 (4%) Query: 5 KILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGXX 64 ++LVVE+E ++ + EGYDV A +G++ +L++++ LPG +G Sbjct: 4 RVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLE 63 Query: 65 XXXXXXXXXXXXXIFL-TGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHRAMP 123 I L T +D+ ++++GL+ GADDY+ KPFN E R R L R Sbjct: 64 LCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRRT-- 121 Query: 124 HQEKENTFGREFYRFNGWKLDLNSHSLITPEGQEFKLPRSEFRAMLHFCENPGKLQTREE 183 H + RFN S I + L EF + + + ++ TRE+ Sbjct: 122 HTTSDEVLQFADLRFN------RSTREIQRGDRLIDLTAKEFELLDYLLSHARQVLTREQ 175 Query: 184 LLKKMTGRELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGY 229 +L+++ G + ++V IR +R E P +I T+ G GY Sbjct: 176 ILERVWGYDFMGDSNIIEVYIRYLRLKLE-AAGEPRLIQTVRGVGY 220 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 78.6 bits (192), Expect = 2e-17 Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 9/227 (3%) Query: 5 KILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGXX 64 +IL+VED++ TL + Y V A + + +LV++D+ LP +G Sbjct: 2 RILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGIT 61 Query: 65 XXXXXXXXXXXXXIFL-TGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHRAMP 123 I + T RD DKI GL+ GADDY+ KP + EL R R LL R Sbjct: 62 LCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRRGCA 121 Query: 124 HQEKENTFGREFYRFNGWKLDLNSHSLITPEGQEFKLPRSEFRAMLHFCENPGKLQTREE 183 + +G +LD +++ ++ + + L R E+ + N ++ +R Sbjct: 122 TCQPVLEWG-------PIRLDPSTYE-VSYDNEVLSLTRKEYSILELLLRNGRRVLSRSM 173 Query: 184 LLKKMTGRELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGYR 230 ++ + E P++ TV V +R +R+ + + + I T+HG GYR Sbjct: 174 IIDSIWKLESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGYR 220 >SYNE-PCC-01-000877 sll1330 Length = 250 Score = 77.8 bits (190), Expect = 3e-17 Identities = 63/230 (27%), Positives = 91/230 (39%), Gaps = 8/230 (3%) Query: 6 ILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGXXX 65 I VVE R+ L + GY V + + N L V+D +L +G Sbjct: 6 ISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGDGIEL 65 Query: 66 XXXXXXXXXXXXIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHRAMPHQ 125 L+ +D E D + GL+ GADDYLTKPF +E R L+ R Sbjct: 66 CRWLYQQHQSMIFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRRV---- 121 Query: 126 EKENTFGREFYRFNGWKLDLNSHSLITPEGQEFKLPRSEFRAMLHFCENPGKLQTREELL 185 + K+DL + +G L EF + + G +R ELL Sbjct: 122 --RTVAAPLLLDYGVLKIDLVQRR-VEYQGNFVDLTPQEFSLLYVLTQAEGSALSRTELL 178 Query: 186 KKMTGRELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGYRFCGDI 235 ++ E RT+D + +RK E P P++I T+ GYRF I Sbjct: 179 RR-AWPEAIDNPRTIDTHVLSLRKKIETDPRQPSLIQTVRNVGYRFNSSI 227 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 65.9 bits (159), Expect = 1e-13 Identities = 60/233 (25%), Positives = 100/233 (42%), Gaps = 15/233 (6%) Query: 5 KILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGXX 64 +IL++ED+ + N L+ G+ V +G L + + VV+D+ LP +G Sbjct: 2 RILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLE 61 Query: 65 XXXXXXXXXXXXXIF-LTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHRAMP 123 + LT RD +++ GL+ GADDYL KPF E+ R + L+ R Sbjct: 62 VLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRRYG 121 Query: 124 HQEKENTFGREFYRFNGWKLDLNSHSLITPEGQEFKLPRSEFRAMLHFCENPGKLQTREE 183 + G KLD N S + Q L E++ + F N ++ +R Sbjct: 122 YH-------HSVIEQAGVKLDQNQRS-VWLNNQPISLTSREYKLLELFMLNKDRVLSRSS 173 Query: 184 LLKKMTGRELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGYRFCGDIE 236 + +K++ + + +DV I +R+ I T+HG GY G +E Sbjct: 174 IEEKLSSWDEEISSGALDVHIYNLRQKL-----GKQFIRTVHGVGYAL-GQVE 220 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 60.8 bits (146), Expect = 4e-12 Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 3/116 (2%) Query: 6 ILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGX-- 63 +L+VED R + GI + G+ V A +GVE L N + +LVV+DI +P NG Sbjct: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 Query: 64 -XXXXXXXXXXXXXXIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLL 118 I + + E D+ G+ GAD Y+ KPF P EL + LL Sbjct: 90 CRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLL 145 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 58.2 bits (139), Expect = 2e-11 Identities = 40/119 (33%), Positives = 57/119 (47%), Gaps = 4/119 (3%) Query: 6 ILVVEDEIVTRNTLKGIFEAEG-YDVFEAENGVEMHHILANHNINLVVMDINLPGKNGXX 64 +L+V+DE R +++ E G + V A N E L +H LV+ DI +P +G Sbjct: 58 LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGYQ 117 Query: 65 XXXXXXXXXXXXX---IFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHR 120 +FLT R D+I G + G D +L+KPF+P EL RNLL R Sbjct: 118 FLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLAR 176 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 57.4 bits (137), Expect = 4e-11 Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 3/119 (2%) Query: 6 ILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGXXX 65 +L+V+D+ +K E +GY V A NG E +L +++V DI +P +G Sbjct: 10 LLLVDDDPNLLLLVKDYLEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAF 69 Query: 66 XXXXXXXXXXXXI---FLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHRA 121 I FL+ + +++ GL +GAD Y+ KPF P EL + ++ L +A Sbjct: 70 IEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQA 128 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 57.4 bits (137), Expect = 4e-11 Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 9/131 (6%) Query: 6 ILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNI--NLVVMDINLPGKNGX 63 ILVVEDE + R + E Y + EAENG +L + + +L++ D+ +P +G Sbjct: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 Query: 64 XXXXXXXXXXXXXX---IFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHR 120 IFLT D G+ GADDYL KPF +L N ++ Sbjct: 64 GLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLL----NAVNS 119 Query: 121 AMPHQEKENTF 131 + Q K + F Sbjct: 120 RLQKQAKLSAF 130 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 53.5 bits (127), Expect = 6e-10 Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 3/124 (2%) Query: 5 KILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLP---GKN 61 K+LVV+D +R L+ + + G+ V EAENG + + + +++MD+ +P G++ Sbjct: 419 KVLVVDDRPESRLLLRQLLTSLGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRS 478 Query: 62 GXXXXXXXXXXXXXXXIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHRA 121 I LT E ++ L G DD+L+KPF P EL L A Sbjct: 479 TTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIALLAKHLAVA 538 Query: 122 MPHQ 125 +P Q Sbjct: 539 LPSQ 542 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 51.6 bits (122), Expect = 2e-09 Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 5/111 (4%) Query: 5 KILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLP---GKN 61 KILVV+D+ V R L + G+++ EA NG E + + +L+ MD+ +P G Sbjct: 631 KILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYE 690 Query: 62 GXXXXXXXXXXXXXXXIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTI 112 + LT E +K + L G DD+L KPF RE TI Sbjct: 691 ATKYIKGQVKGNATAVVALTASVLEEEKAIVLSAGCDDFLRKPF--RENTI 739 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 51.2 bits (121), Expect = 3e-09 Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 3/116 (2%) Query: 6 ILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGXXX 65 ILVV+D + + E EGY +G E + +L+++D+ +PG +G Sbjct: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQPDLILLDLMMPGMDGLEV 79 Query: 66 XXXXXXXXXXXXI---FLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLL 118 I FLT + + D + GA DY+TKPF+P EL R + L Sbjct: 80 CDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVKTHL 135 Score = 43.1 bits (100), Expect = 8e-07 Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 4/103 (3%) Query: 6 ILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGXXX 65 IL+ ED ++ + K + + GY V NG E LA + ++V+MD+ +P +G Sbjct: 742 ILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTA 801 Query: 66 XXXXXXXXXXX----XIFLTGRDNEVDKILGLEIGADDYLTKP 104 I +T E D+ L G +DY++KP Sbjct: 802 TEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKP 844 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 48.1 bits (113), Expect = 2e-08 Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 4/125 (3%) Query: 5 KILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGXX 64 KILVV+D+ R L+ + EG+ V A NG E A +V++D +P +G Sbjct: 13 KILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGFA 72 Query: 65 ---XXXXXXXXXXXXXIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHR- 120 + +TG D+E E GA DY+TKP + L R + LL++ Sbjct: 73 CCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLLYQN 132 Query: 121 AMPHQ 125 + HQ Sbjct: 133 RLQHQ 137 >SYNE-PCC-01-001575 slr0312 Length = 209 Score = 48.1 bits (113), Expect = 2e-08 Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 4/126 (3%) Query: 2 TTPKILVVEDEIVTRNTLKGIF--EAEGYDVFEAENGVEMHHILANHNINLVVMDINLPG 59 TT ++L+ +D + R L I + + + +AENG + + H ++ +MD+ +P Sbjct: 5 TTIRVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPE 64 Query: 60 KNGXXXXXXX-XXXXXXXXIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLL 118 G I LT D++ D GL+ GA YL K P EL + A + Sbjct: 65 VEGVAAISAICAIVKFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDEL-LNAIRTV 123 Query: 119 HRAMPH 124 HR + Sbjct: 124 HRGQKY 129 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 47.8 bits (112), Expect = 3e-08 Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 11/148 (7%) Query: 6 ILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGXXX 65 IL+VED + R + ++G V A NG E +L ++ + ++MDI +P NG Sbjct: 720 ILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYDA 779 Query: 66 XXXXXXXXXXX---XIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHRAM 122 I +T D+ L+ G +D+LTKP P +LL + + Sbjct: 780 TRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKP--------DLLFQTL 831 Query: 123 PHQEKENTFGREFYRFNGWKLDLNSHSL 150 H N+ + + K DL+ S+ Sbjct: 832 AHWIPPNSAREKKNPSSNLKADLSFSSM 859 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 42.7 bits (99), Expect = 1e-06 Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 3/109 (2%) Query: 5 KILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGXX 64 +IL+VED + + + G++V A NG+ L N+ LV+MD+ +P +G Sbjct: 926 RILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIE 985 Query: 65 XXXXXX---XXXXXXXIFLTGRDNEVDKILGLEIGADDYLTKPFNPREL 110 + +T + D+ L+ G +D+L KP P EL Sbjct: 986 ATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEEL 1034 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 42.7 bits (99), Expect = 1e-06 Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 3/118 (2%) Query: 5 KILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLP---GKN 61 K+L+VED + R+ L +GY+V A +G + + + + L++MD++LP G Sbjct: 6 KVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGWT 65 Query: 62 GXXXXXXXXXXXXXXXIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLH 119 I LT D+ + G DDY TKP + L + L++ Sbjct: 66 ATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEALIN 123 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.321 0.141 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,979 Number of Sequences: 78 Number of extensions: 903 Number of successful extensions: 77 Number of sequences better than 1.0e-05: 26 Number of HSP's better than 0.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 22 Number of HSP's gapped (non-prelim): 28 length of query: 236 length of database: 48,235 effective HSP length: 60 effective length of query: 176 effective length of database: 43,555 effective search space: 7665680 effective search space used: 7665680 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 91 (39.7 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= HINF-KW2-01-000960 HI0980 Hin recombinational enhancer binding protein (fis) (99 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value HINF-KW2-01-000960 HI0980 Hin recombinational enhancer binding ... 194 6e-53 >HINF-KW2-01-000960 HI0980 Hin recombinational enhancer binding protein (fis) Length = 99 Score = 194 bits (493), Expect = 6e-53 Identities = 99/99 (100%), Positives = 99/99 (100%) Query: 1 MLEQQRNSADALTVSVLNAQSQVTSKPLRDSVKQALRNYLAQLDGQDVNDLYELVLAEVE 60 MLEQQRNSADALTVSVLNAQSQVTSKPLRDSVKQALRNYLAQLDGQDVNDLYELVLAEVE Sbjct: 1 MLEQQRNSADALTVSVLNAQSQVTSKPLRDSVKQALRNYLAQLDGQDVNDLYELVLAEVE 60 Query: 61 HPMLDMIMQYTRGNQTRAANMLGINRGTLRKKLKKYGMG 99 HPMLDMIMQYTRGNQTRAANMLGINRGTLRKKLKKYGMG Sbjct: 61 HPMLDMIMQYTRGNQTRAANMLGINRGTLRKKLKKYGMG 99 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.315 0.130 0.345 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8649 Number of Sequences: 78 Number of extensions: 277 Number of successful extensions: 2 Number of sequences better than 1.0e-05: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 1 Number of HSP's gapped (non-prelim): 1 length of query: 99 length of database: 48,235 effective HSP length: 51 effective length of query: 48 effective length of database: 44,257 effective search space: 2124336 effective search space used: 2124336 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 86 (37.7 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) (231 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 463 e-133 SYNE-PCC-01-000414 sll0649 140 5e-36 SYNE-PCC-01-000518 sll0789 139 1e-35 SYNE-PCC-01-001437 slr0081 137 3e-35 SYNE-PCC-01-000242 sll0396 132 1e-33 SYNE-PCC-01-000523 sll0797 128 2e-32 SYNE-PCC-01-002033 slr0947 126 5e-32 SYNE-PCC-01-001461 slr0115 118 2e-29 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 118 2e-29 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 116 6e-29 SYNE-PCC-01-002672 slr1837 113 5e-28 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 111 2e-27 SYNE-PCC-01-002486 slr1584 108 2e-26 SYNE-PCC-01-000877 sll1330 108 2e-26 SYNE-PCC-01-002489 slr1588 82 2e-18 SYNE-PCC-01-002731 slr1909 79 1e-17 SYNE-PCC-01-002788 slr1982 73 7e-16 SYNE-PCC-01-001306 sll1905 72 2e-15 SYNE-PCC-01-002086 slr1042 69 1e-14 SYNE-PCC-01-002635 slr1783 67 4e-14 SYNE-PCC-01-001133 sll1673 65 2e-13 SYNE-PCC-01-002873 slr2098 63 7e-13 SYNE-PCC-01-001132 sll1672 63 9e-13 SYNE-PCC-01-002221 slr1213 61 3e-12 SYNE-PCC-01-002618 slr1760 57 5e-11 SYNE-PCC-01-000800 sll1228 57 5e-11 SYNE-PCC-01-002879 slr2104 56 1e-10 SYNE-PCC-01-000608 sll0921 54 3e-10 SYNE-PCC-01-002778 slr1969 47 5e-08 SYNE-PCC-01-002617 slr1759 47 5e-08 SYNE-PCC-01-001160 sll1708 47 5e-08 HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator pr... 46 9e-08 SYNE-PCC-01-001575 slr0312 45 2e-07 SYNE-PCC-01-001075 sll1592 45 3e-07 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 463 bits (1192), Expect = e-133 Identities = 231/231 (100%), Positives = 231/231 (100%) Query: 1 MTRKILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKENPKLILLDWMLPGRSG 60 MTRKILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKENPKLILLDWMLPGRSG Sbjct: 1 MTRKILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKENPKLILLDWMLPGRSG 60 Query: 61 IQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWR 120 IQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWR Sbjct: 61 IQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWR 120 Query: 121 RIYEQQSQFIQIDELSIDENAQRVFFQQQEINLSSTEFKLLHFFMRHPEKVYSREQLLNR 180 RIYEQQSQFIQIDELSIDENAQRVFFQQQEINLSSTEFKLLHFFMRHPEKVYSREQLLNR Sbjct: 121 RIYEQQSQFIQIDELSIDENAQRVFFQQQEINLSSTEFKLLHFFMRHPEKVYSREQLLNR 180 Query: 181 IWHNDLEVEYRTVDSYIRRLRRNLAPFQCEHYIQTVRGSGYRFSSYLRDKQ 231 IWHNDLEVEYRTVDSYIRRLRRNLAPFQCEHYIQTVRGSGYRFSSYLRDKQ Sbjct: 181 IWHNDLEVEYRTVDSYIRRLRRNLAPFQCEHYIQTVRGSGYRFSSYLRDKQ 231 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 140 bits (352), Expect = 5e-36 Identities = 88/228 (38%), Positives = 133/228 (58%), Gaps = 9/228 (3%) Query: 5 ILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKEN-PKLILLDWMLPGRSGIQF 63 ILIVED+ I ++I L ++ + I +D +T + +E P LI+LD MLP G++ Sbjct: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLEV 73 Query: 64 IQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWRRIY 123 I++Q I+MLTAK E D I L+ GADDY+ KPFSP+ L+AR+ A+ RR Sbjct: 74 CTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRALLRRQL 133 Query: 124 EQ---QSQFIQIDELSID-ENAQRVFFQ---QQEINLSSTEFKLLHFFMRHPEKVYSREQ 176 Q Q + + +D + Q +Q Q+E+ L+ EF LL FM +P +V++R Q Sbjct: 134 RQGQPVGQIYRTNHFQVDLDQHQASRYQGDRQEELELTGLEFNLLATFMSYPGRVWNRTQ 193 Query: 177 LLNRIWHNDLEVEYRTVDSYIRRLRRNLAPFQCE-HYIQTVRGSGYRF 223 L+ ++W ND + R VD++IRRLR+ + P +I+TV G GY+F Sbjct: 194 LIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGYKF 241 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 139 bits (349), Expect = 1e-35 Identities = 83/227 (36%), Positives = 130/227 (57%), Gaps = 6/227 (2%) Query: 4 KILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKE---NPKLILLDWMLPGRSG 60 ++L+VEDE + + L ++ Y V D A + + + N L + DWM+PG SG Sbjct: 2 RLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSG 61 Query: 61 IQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWR 120 ++ Q ++ Q S ++PI+MLTAK D + L+AGADDY+ KPF LLAR+ ++ R Sbjct: 62 LELCQKLRGQRS--SLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAELLARLRSLQR 119 Query: 121 RIYEQQSQFIQIDELSIDENAQRVFFQQQ-EINLSSTEFKLLHFFMRHPEKVYSREQLLN 179 R E Q Q +Q+ + +D V +Q I L++ EF+LL +FM+HP+++ S EQ+ N Sbjct: 120 RSPELQPQQLQVGQWWLDYGTFAVVTPEQARITLTAKEFQLLEYFMKHPQQILSSEQIKN 179 Query: 180 RIWHNDLEVEYRTVDSYIRRLRRNLAPFQCEHYIQTVRGSGYRFSSY 226 ++W E V + +R LRR L + + I+TV G GYRF + Sbjct: 180 QLWALSAESTSNVVAAQVRLLRRKLEEYSHGNLIETVYGLGYRFQPH 226 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 137 bits (345), Expect = 3e-35 Identities = 91/235 (38%), Positives = 136/235 (57%), Gaps = 16/235 (6%) Query: 2 TRKILIVEDECAIREMIALFLSQKYYDVIEASDFKTAI---NKIKENP-----KLILLDW 53 + +IL+VEDE +IRE I L L ++ Y+V D + A+ + E+P LI+LD Sbjct: 30 SHRILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDI 89 Query: 54 MLPGRSGIQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLA 113 MLP +G+ + ++ PI++++AK +E + + L GADDYITKPFS + L+A Sbjct: 90 MLPQVNGLDVCRSLRFGGDNT--PILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVA 147 Query: 114 RIEAVWRR---IYEQQSQFIQIDELSIDENAQRVFFQQQEINLSSTEFKLLHFFMRHPEK 170 R A+ RR + F + +L + RV + +E++L+ EF+LL FM +P + Sbjct: 148 RCRAMIRRQGLAGNNIAPFRKFRDLVLYPQECRVLMRGEEVSLAPKEFRLLELFMSYPRR 207 Query: 171 VYSREQLLNRIWHNDLEVEYRTVDSYIRRLRRNLA--PFQCEHYIQTVRGSGYRF 223 V+SREQL+ IW D + +TVD +IR LR L P Q E Y+ TVRG GYRF Sbjct: 208 VWSREQLIEHIWGIDFMGDSKTVDVHIRWLREKLEQDPSQPE-YLVTVRGFGYRF 261 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 132 bits (332), Expect = 1e-33 Identities = 77/222 (34%), Positives = 124/222 (55%), Gaps = 3/222 (1%) Query: 1 MTRKILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKE-NPKLILLDWMLPGRS 59 M+ ++L+VE+E + + L L + YDV A D + +E P LI+++ LPG S Sbjct: 1 MSHRVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMS 60 Query: 60 GIQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVW 119 G++ + +++ S IPII++TAK E+ + L+AGADDYI KPF+ ARI Sbjct: 61 GLELCRRLREMGS--RIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQL 118 Query: 120 RRIYEQQSQFIQIDELSIDENAQRVFFQQQEINLSSTEFKLLHFFMRHPEKVYSREQLLN 179 RR + + +Q +L + + + + + I+L++ EF+LL + + H +V +REQ+L Sbjct: 119 RRTHTTSDEVLQFADLRFNRSTREIQRGDRLIDLTAKEFELLDYLLSHARQVLTREQILE 178 Query: 180 RIWHNDLEVEYRTVDSYIRRLRRNLAPFQCEHYIQTVRGSGY 221 R+W D + ++ YIR LR L IQTVRG GY Sbjct: 179 RVWGYDFMGDSNIIEVYIRYLRLKLEAAGEPRLIQTVRGVGY 220 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 128 bits (321), Expect = 2e-32 Identities = 78/232 (33%), Positives = 131/232 (56%), Gaps = 13/232 (5%) Query: 4 KILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKEN---PKLILLDWMLPGRSG 60 +IL+VEDE + I L + Y V +D A + ++ L ++DW+LPG SG Sbjct: 2 RILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSG 61 Query: 61 IQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWR 120 ++ Q ++ Q + ++P++MLTA E+ + L+AGADDY+TKPF LLAR+ A+ R Sbjct: 62 LELCQKLRTQGN--SLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAELLARLRALQR 119 Query: 121 RIYEQQSQFIQIDELSIDEN--------AQRVFFQQQEINLSSTEFKLLHFFMRHPEKVY 172 R + Q Q + + S+D + ++ + ++QEI L+ EF++ + M++PE++ Sbjct: 120 RSPQFQPQILTLGNFSLDPSNNLLSVTISEPLNLERQEIALTVREFQIFQYLMQNPERII 179 Query: 173 SREQLLNRIWHNDLEVEYRTVDSYIRRLRRNLAPFQCEHYIQTVRGSGYRFS 224 S ++ ++W D E V + +R +RR LA C I+TV G GYRF+ Sbjct: 180 SGSKIRQQLWDLDEEPMSNVVAAQMRLIRRKLAQQNCPCPIKTVPGQGYRFT 231 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 126 bits (317), Expect = 5e-32 Identities = 86/231 (37%), Positives = 123/231 (53%), Gaps = 13/231 (5%) Query: 7 IVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKEN-PKLILLDWMLPGRSGIQFIQ 65 +V+DE +IR ++ LS Y+V+ A+D + AI E+ P L++LD M+P G Q Sbjct: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 Query: 66 YIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWRRIYEQ 125 ++K+ IPIIMLTA D I L GADDY+ KPFSP+ L ARI +V RR+ + Sbjct: 61 ELRKESD---IPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKN 117 Query: 126 ------QSQFIQIDELSIDENAQRVFFQQQEINLSSTEFKLLHFFMRHPEKVYSREQLLN 179 S +QI + ID N ++V+ + I L+ EF LL + + +SR ++L Sbjct: 118 GMPGIPSSGVLQIATIRIDTNKRQVYKGDERIRLTGMEFSLLELLVSRSGEPFSRSEILQ 177 Query: 180 RIWHNDLE--VEYRTVDSYIRRLRRNLAPFQCE-HYIQTVRGSGYRFSSYL 227 +W E V+ R VD +I RLR L I T RG+GY F L Sbjct: 178 EVWGYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGYLFQRIL 228 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 118 bits (295), Expect = 2e-29 Identities = 73/225 (32%), Positives = 122/225 (54%), Gaps = 7/225 (3%) Query: 4 KILIVEDECAIREMIALFLSQKYYDVIEASD-FKTAINKIKENPKLILLDWMLPGRSGIQ 62 +ILI++D+ AI +++++ L YDV +A D K ++ P LI+LD MLP G Sbjct: 3 RILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFT 62 Query: 63 FIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWRRI 122 Q +++ E A IP++MLTA +D I ++GADDY+TKPF + +LAR+ A+ RR Sbjct: 63 VCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLRRT 122 Query: 123 -----YEQQSQFIQIDELSIDENAQRVFFQQQEINLSSTEFKLLHFFMRHPEKVYSREQL 177 + S+ + L++ + + I L+ EF+LLH ++ + S + Sbjct: 123 DRIPQAAKHSEILNQGPLTLVPERFEAIWFGKSIKLTHLEFELLHCLLQRHGQTVSPSDI 182 Query: 178 LNRIWHNDLEVEYRTVDSYIRRLRRNLAPF-QCEHYIQTVRGSGY 221 L +W + + + T+ +IR LR L P + +I+TV G+GY Sbjct: 183 LREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTVYGAGY 227 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 118 bits (295), Expect = 2e-29 Identities = 71/224 (31%), Positives = 127/224 (56%), Gaps = 9/224 (4%) Query: 4 KILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKENPKLILLDWMLPGRSGIQF 63 K+L+V+D+ + E+++ L + +DV A++ A+ K+ E+ KL+LLD M+P +GI+ Sbjct: 3 KLLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKLNESYKLVLLDVMMPKLNGIET 62 Query: 64 IQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWRRIY 123 ++ I+K + +P++MLTA+ + D + L GADD + KPF+ + L+ARI+A+ RR Sbjct: 63 LKEIRKVSN---VPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRRSA 119 Query: 124 EQQSQFIQIDELSIDENAQR-----VFFQQQEINLSSTEFKLLHFFMRHPEKVYSREQLL 178 + ++ LS D + ++ +NL+ EFK+L ++ V SRE+L Sbjct: 120 SPSNNISNVEILSFDGITLHFSHGIATYNEENLNLTDYEFKILCLLLKSKGNVVSREELS 179 Query: 179 NRIWHNDLEVEYRTVDSYIRRLRRNLAPFQCE-HYIQTVRGSGY 221 + L R++D +I LRR L + + + +T+RG GY Sbjct: 180 LEVMEKPLTPFDRSLDMHISNLRRKLPKRKNKPSWFKTLRGKGY 223 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 116 bits (291), Expect = 6e-29 Identities = 75/232 (32%), Positives = 123/232 (53%), Gaps = 13/232 (5%) Query: 2 TRKILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKI-KENPKLILLDWMLPGRSG 60 T KIL+VEDE R + + YDV EA + + + N L+++D LPG++G Sbjct: 3 TPKILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNG 62 Query: 61 IQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWR 120 + + ++++ S +P+I LT + E D I L GADDY+TKPF+P+ L R + Sbjct: 63 LLLARELREELS---LPLIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLH 119 Query: 121 RIYEQQS-------QFIQIDELSIDENAQRVFFQQ-QEINLSSTEFKLLHFFMRHPEKVY 172 R Q +F + + +D N+ + + QE L +EF+ + F +P K+ Sbjct: 120 RAMPHQEKENTFGREFYRFNGWKLDLNSHSLITPEGQEFKLPRSEFRAMLHFCENPGKLQ 179 Query: 173 SREQLLNRIWHNDLEVEYRTVDSYIRRLRRNLAPF-QCEHYIQTVRGSGYRF 223 +RE+LL ++ +L+ + RTVD IRR+R++ + I T+ G GYRF Sbjct: 180 TREELLKKMTGRELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGYRF 231 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 113 bits (283), Expect = 5e-28 Identities = 72/232 (31%), Positives = 121/232 (52%), Gaps = 13/232 (5%) Query: 5 ILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINK-IKENPKLILLDWMLPGRSGIQF 63 IL+V+DE A+ E ++ L + + + A KT + I L++LDWMLP SG++ Sbjct: 4 ILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGLEI 63 Query: 64 IQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWRR-- 121 + I+ + P++ LTAK T +D +A L+AG DDY+ KPF + LLAR+ A+ RR Sbjct: 64 CRQIRILGH--STPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFELRELLARVRALLRRQS 121 Query: 122 --------IYEQQSQFIQIDELSIDENAQRVFFQQQEINLSSTEFKLLHFFMRHPEKVYS 173 + ++ + ++ +S+D Q + Q Q I LS E LL F++ P ++ S Sbjct: 122 HGETITETLGAVKNNLLSVNNVSLDVANQVAYCQGQRIALSEKEVALLTLFLQAPGQILS 181 Query: 174 REQLLNRIWHNDLEVEYRTVDSYIRRLRRNLAPFQCEHYIQTVRGSGYRFSS 225 E++ + +W + + + +R LRR + I +V G GY F + Sbjct: 182 HEEIYSHLWPGESPPSSNVLAALVRLLRRKIEQPNAPRLINSVYGKGYCFEA 233 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 111 bits (277), Expect = 2e-27 Identities = 67/219 (30%), Positives = 125/219 (57%), Gaps = 7/219 (3%) Query: 4 KILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKENP-KLILLDWMLPGRSGIQ 62 +IL++ED+ I + + L++ + V +D KT + + P ++LD LP G++ Sbjct: 2 RILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLE 61 Query: 63 FIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWRRI 122 +Q + + ++ +P+++LTA+ T ++ + L +GADDY+ KPF+ + AR++A+ RR Sbjct: 62 VLQ--QWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRR 119 Query: 123 YEQQSQFIQIDELSIDENAQRVFFQQQEINLSSTEFKLLHFFMRHPEKVYSREQLLNRIW 182 Y I+ + +D+N + V+ Q I+L+S E+KLL FM + ++V SR + ++ Sbjct: 120 YGYHHSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSRSSIEEKLS 179 Query: 183 HNDLEVEYRTVDSYIRRLRRNLAPFQCEHYIQTVRGSGY 221 D E+ +D +I LR+ L + +I+TV G GY Sbjct: 180 SWDEEISSGALDVHIYNLRQKLG----KQFIRTVHGVGY 214 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 108 bits (270), Expect = 2e-26 Identities = 72/224 (32%), Positives = 117/224 (52%), Gaps = 4/224 (1%) Query: 4 KILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKE-NPKLILLDWMLPGRSGIQ 62 +IL+VED+ + E +A LS + Y V A+D A + L++LD MLP GI Sbjct: 2 RILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGIT 61 Query: 63 FIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWRRI 122 Q K + +PI+M+TA+ T D I L+AGADDY+ KP L AR+ A+ RR Sbjct: 62 LCQ--KWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRRG 119 Query: 123 YEQQSQFIQIDELSIDENAQRVFFQQQEINLSSTEFKLLHFFMRHPEKVYSREQLLNRIW 182 ++ + +D + V + + ++L+ E+ +L +R+ +V SR +++ IW Sbjct: 120 CATCQPVLEWGPIRLDPSTYEVSYDNEVLSLTRKEYSILELLLRNGRRVLSRSMIIDSIW 179 Query: 183 HNDLEVEYRTVDSYIRRLRRNL-APFQCEHYIQTVRGSGYRFSS 225 + E TV ++R LR+ L + I+TV G GYR ++ Sbjct: 180 KLESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGYRLAN 223 >SYNE-PCC-01-000877 sll1330 Length = 250 Score = 108 bits (270), Expect = 2e-26 Identities = 78/231 (33%), Positives = 121/231 (52%), Gaps = 9/231 (3%) Query: 5 ILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKEN-PKLILLDWMLPGRSGIQF 63 I +VE +R +++ L Q Y V + S F A P L ++D L GI+ Sbjct: 6 ISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGDGIEL 65 Query: 64 IQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWRRIY 123 +++ +Q I +L+AK TE+D + L AGADDY+TKPF Q LARIE + RR+ Sbjct: 66 CRWLYQQHQSM---IFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRRVR 122 Query: 124 EQQSQ-FIQIDELSIDENAQRVFFQQQEINLSSTEFKLLHFFMRHPEKVYSREQLLNRIW 182 + + L ID +RV +Q ++L+ EF LL+ + SR +LL R W Sbjct: 123 TVAAPLLLDYGVLKIDLVQRRVEYQGNFVDLTPQEFSLLYVLTQAEGSALSRTELLRRAW 182 Query: 183 HNDLEVEYRTVDSYIRRLRRNLA--PFQCEHYIQTVRGSGYRFSSYLRDKQ 231 ++ RT+D+++ LR+ + P Q IQTVR GYRF+S + +++ Sbjct: 183 PEAID-NPRTIDTHVLSLRKKIETDPRQ-PSLIQTVRNVGYRFNSSILEEK 231 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 81.6 bits (200), Expect = 2e-18 Identities = 47/116 (40%), Positives = 67/116 (57%), Gaps = 3/116 (2%) Query: 5 ILIVEDECAIREMIALFLSQKYYDVIEASDFKTAI---NKIKENPKLILLDWMLPGRSGI 61 IL+VEDE IRE+I LS + Y ++EA + A+ N ++ P LI+ D M+P G Sbjct: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 Query: 62 QFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEA 117 I ++K AAIP I LTA T +D +N+GADDY+ KPF + LL + + Sbjct: 64 GLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNS 119 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 79.3 bits (194), Expect = 1e-17 Identities = 51/197 (25%), Positives = 104/197 (52%), Gaps = 16/197 (8%) Query: 5 ILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKEN-PKLILLDWMLPGRSGIQF 63 +L+V+D+ + ++ +L + Y V A + + A++ + P +I+ D M+P G F Sbjct: 10 LLLVDDDPNLLLLVKDYLEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAF 69 Query: 64 IQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWRRIY 123 I+ +++ + IP++ L+AK + + LN GAD Y+ KPF P+ L A++++ R Sbjct: 70 IEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLR--- 126 Query: 124 EQQSQFIQIDELSIDENAQRVFFQQQEINLSSTEFKLLHFFMRHPEKVYSREQLLNRIWH 183 Q + +Q + +++NA+ +++ L+ TE K++ + L NR Sbjct: 127 -QADRLLQHNNHPLEDNAR--VQVARDVELTPTETKVIQLV---------AQGLANREIA 174 Query: 184 NDLEVEYRTVDSYIRRL 200 + L+V RTV+S++ + Sbjct: 175 DHLKVSQRTVESHVSNM 191 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 73.2 bits (178), Expect = 7e-16 Identities = 47/116 (40%), Positives = 67/116 (57%), Gaps = 1/116 (0%) Query: 4 KILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINK-IKENPKLILLDWMLPGRSGIQ 62 K+L+VED R+M++ L +K Y+V+ A D + A+ I E+P+LIL+D LP G Sbjct: 6 KVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGWT 65 Query: 63 FIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAV 118 + IK A IPII LTA + D + AG DDY TKP + LL ++EA+ Sbjct: 66 ATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEAL 121 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 72.0 bits (175), Expect = 2e-15 Identities = 40/113 (35%), Positives = 63/113 (55%), Gaps = 1/113 (0%) Query: 5 ILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKE-NPKLILLDWMLPGRSGIQF 63 IL+V+D +I+ L + Y + A+ ++ + P LILLD M+PG G++ Sbjct: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQPDLILLDLMMPGMDGLEV 79 Query: 64 IQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIE 116 +K+ IP+I LTA + ++D + GA DY+TKPFSP LLAR++ Sbjct: 80 CDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVK 132 Score = 48.9 bits (115), Expect = 1e-08 Identities = 31/109 (28%), Positives = 60/109 (55%), Gaps = 2/109 (1%) Query: 5 ILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKI-KENPKLILLDWMLPGRSGIQF 63 IL+ ED +++ L L + Y V ++ + A++ + K + ++L+D +P G+ Sbjct: 742 ILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTA 801 Query: 64 IQYIKKQESYAAIP-IIMLTAKSTEEDCIACLNAGADDYITKPFSPQIL 111 ++I++ + + P II +TA S E D CL +G +DY++KP + L Sbjct: 802 TEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKPIRLEAL 850 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 68.9 bits (167), Expect = 1e-14 Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 1/117 (0%) Query: 5 ILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKE-NPKLILLDWMLPGRSGIQF 63 +L+VED + REMI+ L + V A D A+ K++ +P L++LD ++P +G + Sbjct: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 Query: 64 IQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWR 120 + IK +P+IM ++K E D + GAD YI KPF P L+ I+ + R Sbjct: 90 CRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLLR 146 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 67.4 bits (163), Expect = 4e-14 Identities = 55/223 (24%), Positives = 103/223 (46%), Gaps = 18/223 (8%) Query: 5 ILIVEDECAIREMIALFLSQKY-YDVIEASDFKTAINKIKEN-PKLILLDWMLPGRSGIQ 62 +L+V+DE +RE + FL + V A++ A + ++ + P L++ D M+P G Q Sbjct: 58 LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGYQ 117 Query: 63 FIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWRRI 122 F+Q +++ + ++P++ LTA+ D I G D +++KPF P L A + + R Sbjct: 118 FLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLAR- 176 Query: 123 YEQQSQFIQIDELSIDENAQRVFFQQQEI----NLSSTEFKLLHFFMRHPEKVYS--REQ 176 +Q S + + E Q + +++I + +T + F + V + Sbjct: 177 -QQASSDAGSESAKLQEIYQEIRALKEQIGQPSGIHTTPSPIKLDFTPREQSVLDLVSQG 235 Query: 177 LLNRIWHNDLEVEYRTVDSYIRRL--------RRNLAPFQCEH 211 L+N+ L+ R V+ Y+ RL R L F +H Sbjct: 236 LMNKEIAAQLKTSVRNVEKYVSRLFTKTGTNSRTELVRFALQH 278 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 64.7 bits (156), Expect = 2e-13 Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 4/148 (2%) Query: 5 ILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIK-ENPKLILLDWMLPGRSGIQF 63 IL+V+D ++++ L Y V + K A+ ++ + P LILLD +P G Q Sbjct: 11 ILLVDDLPNNLQLLSDLLINLGYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQV 70 Query: 64 IQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWRRIY 123 + IKK+E IPII ++A D + G DYITKPF + ++ARIE + Sbjct: 71 CEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQIEEVVARIEG---QFT 127 Query: 124 EQQSQFIQIDELSIDENAQRVFFQQQEI 151 Q+ + E+ A+ V +Q + + Sbjct: 128 IQRQRIALKREVRKRREAEEVLYQSRAL 155 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 63.2 bits (152), Expect = 7e-13 Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 17/160 (10%) Query: 4 KILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKENP-KLILLDWMLPGRSGIQ 62 +IL+VED +E+ A L ++V A++ A+ ++ N L+L+D +P GI+ Sbjct: 926 RILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIE 985 Query: 63 FIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWRRI 122 I++ YA +PI+ +TA + D CL AG +D++ KP P E +W ++ Sbjct: 986 ATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEP-------EELWNKL 1038 Query: 123 YEQQSQFIQIDELSIDENAQRVFFQQQEINLSSTEFKLLH 162 +I +D E ++ IN S E + H Sbjct: 1039 L----HWIPVDSPLAPET-----IEESAINTSDPEISIPH 1069 Score = 50.1 bits (118), Expect = 6e-09 Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 16/166 (9%) Query: 3 RKILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKENPK------LILLDWMLP 56 +++L+V+D R ++ L Q + V A+N + E + ++ +DW +P Sbjct: 771 KRVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMP 830 Query: 57 GRSGIQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQIL---LA 113 G++ + +K I ++TA EE + + G DD + KP SP +L LA Sbjct: 831 NMDGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISPSVLFDSLA 890 Query: 114 RIEAVWRRIYEQ--QSQFIQIDELSIDE-----NAQRVFFQQQEIN 152 R+ + ++ QS I ++L++++ A+ + + EIN Sbjct: 891 RVLGDPTALAQEMRQSSGIGAEDLALEKLRRIRGARILLVEDNEIN 936 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 62.8 bits (151), Expect = 9e-13 Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 1/104 (0%) Query: 4 KILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKE-NPKLILLDWMLPGRSGIQ 62 KIL+V+D+ R+++ L+ +++ EAS+ + AI + P LI +D +P G + Sbjct: 631 KILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYE 690 Query: 63 FIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPF 106 +YIK Q A ++ LTA EE+ L+AG DD++ KPF Sbjct: 691 ATKYIKGQVKGNATAVVALTASVLEEEKAIVLSAGCDDFLRKPF 734 >SYNE-PCC-01-002221 slr1213 Length = 241 Score = 61.2 bits (147), Expect = 3e-12 Identities = 44/117 (37%), Positives = 62/117 (52%), Gaps = 4/117 (3%) Query: 1 MTRKILIVEDECAIREMIALFLSQKYYDV-IEASDFKTAINKIKE-NPKLILLDWMLPGR 58 M KILIVEDE + + IA L Y++ + ASD TA+ KI E P L+LLD + G Sbjct: 1 MVTKILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGE 60 Query: 59 SGIQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARI 115 I I+ ++ +S +IPI+ LTA S E Y+ KPF + LL+ + Sbjct: 61 --IDGIEVAERIKSLYSIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTV 115 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 57.0 bits (136), Expect = 5e-11 Identities = 36/126 (28%), Positives = 67/126 (53%), Gaps = 4/126 (3%) Query: 4 KILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKE-NPKLILLDWMLPGRSGIQ 62 KIL+V+D+ +R + ++L ++ + V A++ + A+ K E P+++LLD ++P G Sbjct: 13 KILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGFA 72 Query: 63 FIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWRRI 122 Q + K + ++M+T E AGA DY+TKP +L R++ R + Sbjct: 73 CCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVK---RLL 129 Query: 123 YEQQSQ 128 Y+ + Q Sbjct: 130 YQNRLQ 135 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 57.0 bits (136), Expect = 5e-11 Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 1/112 (0%) Query: 3 RKILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKE-NPKLILLDWMLPGRSGI 61 +K+L+V+D R ++ L+ + V EA + + AI + +P++IL+D +P G Sbjct: 418 QKVLVVDDRPESRLLLRQLLTSLGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGR 477 Query: 62 QFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLA 113 Q IK II LTA + E + L+AG DD+++KPF P+ L+A Sbjct: 478 STTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIA 529 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 55.8 bits (133), Expect = 1e-10 Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 1/108 (0%) Query: 5 ILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKENP-KLILLDWMLPGRSGIQF 63 IL+VED RE L+ K V A++ + A+ + N IL+D +P +G Sbjct: 720 ILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYDA 779 Query: 64 IQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQIL 111 + I++QE + +PII +TA + D L+AG +D++TKP P +L Sbjct: 780 TRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLL 827 >SYNE-PCC-01-000608 sll0921 Length = 222 Score = 54.3 bits (129), Expect = 3e-10 Identities = 34/117 (29%), Positives = 63/117 (53%), Gaps = 3/117 (2%) Query: 4 KILIVEDECAIREMI--ALFLSQKYYDVIEASDFKTAINKIKEN-PKLILLDWMLPGRSG 60 +I ++EDE IR+ + AL + + V EA++ + + +++ P ++++D LP +G Sbjct: 5 RIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNG 64 Query: 61 IQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEA 117 I Q +KK +++LT EE +A +AGAD Y K ++L+ I+A Sbjct: 65 IDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQA 121 >SYNE-PCC-01-002778 slr1969 Length = 750 Score = 47.0 bits (110), Expect = 5e-08 Identities = 28/115 (24%), Positives = 58/115 (50%), Gaps = 3/115 (2%) Query: 5 ILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKE-NPKLILLDWMLPGRSGIQF 63 ++++E + I +I L+ Y VI D A+ +++ P LI++D + + Sbjct: 632 VIVIEQDEEIATLICELLTVANYQVIWLIDTTNALQQVELLQPGLIIVDGDFVDVTEVT- 690 Query: 64 IQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAV 118 + IKK + + + +L+ + + A G DDY+ KP P++LL R++++ Sbjct: 691 -RGIKKSRRISKVTVFLLSESLSSAEWQALSQKGIDDYLLKPLQPELLLQRVQSI 744 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 47.0 bits (110), Expect = 5e-08 Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 2/106 (1%) Query: 4 KILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKI-KENPKLILLDWMLPGRSGIQ 62 +IL+ ED +++ L+ Y V A++ + I+ + K+ L+L+D +P GI Sbjct: 1191 QILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGIT 1250 Query: 63 FIQYIKKQESYAAIP-IIMLTAKSTEEDCIACLNAGADDYITKPFS 107 ++I++ P I+ +TA + D CL+AG D YI+KP S Sbjct: 1251 ACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPIS 1296 >SYNE-PCC-01-001160 sll1708 Length = 226 Score = 47.0 bits (110), Expect = 5e-08 Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 5/117 (4%) Query: 4 KILIVEDECAIREMIALFL-SQKYYDVIEASD--FKTAINKIKENPKLILLDWMLPGRSG 60 KILIVED+ ++ + L + + +++I D + NP LI++D LPG G Sbjct: 18 KILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPGLDG 77 Query: 61 IQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEA 117 I+ + IK ++ I I++LT+ + + IA L++GAD Y K + + L+ I A Sbjct: 78 IEATKQIK--QTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIAA 132 >HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator protein (narP) Length = 208 Score = 46.2 bits (108), Expect = 9e-08 Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 5/118 (4%) Query: 4 KILIVEDECAIREMIALF--LSQKYYDVIEASDFKTAIN-KIKENPKLILLDWMLPGRSG 60 K+L+++D +R I L + V + S I+ ++ +P +I+LD + G SG Sbjct: 6 KVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLSG 65 Query: 61 IQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAV 118 + ++ ++ + A I ++LT + D ++AGAD Y+ K P LL +I+ + Sbjct: 66 LDTLKGLRAEGVDARI--LILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRI 121 >SYNE-PCC-01-001575 slr0312 Length = 209 Score = 45.4 bits (106), Expect = 2e-07 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 5/122 (4%) Query: 2 TRKILIVEDECAIREMIALFLSQK--YYDVIEASDFKTAINKIKEN-PKLILLDWMLPGR 58 T ++LI +D R+ +A +++ + +A + + AI +E+ P + L+D +P Sbjct: 6 TIRVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPEV 65 Query: 59 SGIQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAV 118 G+ I I +A I I+LT ++ED L AGA Y+ K P LL I V Sbjct: 66 EGVAAISAICAIVKFARI--IVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTV 123 Query: 119 WR 120 R Sbjct: 124 HR 125 >SYNE-PCC-01-001075 sll1592 Length = 226 Score = 44.7 bits (104), Expect = 3e-07 Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 11/134 (8%) Query: 4 KILIVEDECAIREMIALFLSQKY-YDVI-EASDFKTAINKIKENP-KLILLDWMLPGRSG 60 +IL+VED+ R + LSQ+ DV EA D +TAI + + +++LD LPG G Sbjct: 9 RILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPGIGG 68 Query: 61 IQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAV-- 118 I+ IKK + +P+++LT+ S + A A Y K + + L+ I +V Sbjct: 69 IEACHQIKK--IHPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLAIRSVAA 126 Query: 119 ----WRRIYEQQSQ 128 W I Q+ Q Sbjct: 127 GAFWWDAIASQEIQ 140 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.324 0.139 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,170 Number of Sequences: 78 Number of extensions: 973 Number of successful extensions: 82 Number of sequences better than 1.0e-05: 34 Number of HSP's better than 0.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 13 Number of HSP's gapped (non-prelim): 37 length of query: 231 length of database: 48,235 effective HSP length: 60 effective length of query: 171 effective length of database: 43,555 effective search space: 7447905 effective search space used: 7447905 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 91 (39.7 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) (221 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 438 e-126 SYNE-PCC-01-002486 slr1584 162 6e-43 SYNE-PCC-01-000523 sll0797 136 5e-35 SYNE-PCC-01-000518 sll0789 134 3e-34 SYNE-PCC-01-002672 slr1837 133 4e-34 SYNE-PCC-01-001461 slr0115 128 1e-32 SYNE-PCC-01-000242 sll0396 128 2e-32 SYNE-PCC-01-002033 slr0947 124 2e-31 SYNE-PCC-01-001437 slr0081 122 7e-31 SYNE-PCC-01-000414 sll0649 120 3e-30 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 111 2e-27 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 110 4e-27 SYNE-PCC-01-000877 sll1330 90 7e-21 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 77 5e-17 SYNE-PCC-01-002731 slr1909 75 1e-16 SYNE-PCC-01-001306 sll1905 73 9e-16 SYNE-PCC-01-001133 sll1673 67 4e-14 SYNE-PCC-01-002879 slr2104 62 2e-12 SYNE-PCC-01-002788 slr1982 60 8e-12 SYNE-PCC-01-002635 slr1783 60 8e-12 SYNE-PCC-01-002086 slr1042 60 8e-12 SYNE-PCC-01-000608 sll0921 60 8e-12 SYNE-PCC-01-001075 sll1592 59 1e-11 SYNE-PCC-01-002873 slr2098 58 2e-11 SYNE-PCC-01-002489 slr1588 56 1e-10 SYNE-PCC-01-001160 sll1708 55 1e-10 HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator pr... 55 1e-10 SYNE-PCC-01-002618 slr1760 53 9e-10 SYNE-PCC-01-000800 sll1228 52 2e-09 SYNE-PCC-01-002617 slr1759 48 2e-08 SYNE-PCC-01-001132 sll1672 44 4e-07 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 438 bits (1126), Expect = e-126 Identities = 221/221 (100%), Positives = 221/221 (100%) Query: 1 MRILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGL 60 MRILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGL Sbjct: 1 MRILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGL 60 Query: 61 EVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRRY 120 EVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRRY Sbjct: 61 EVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRRY 120 Query: 121 GYHHSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSRSSIEEKLSS 180 GYHHSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSRSSIEEKLSS Sbjct: 121 GYHHSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSRSSIEEKLSS 180 Query: 181 WDEEISSGALDVHIYNLRQKLGKQFIRTVHGVGYALGQVEK 221 WDEEISSGALDVHIYNLRQKLGKQFIRTVHGVGYALGQVEK Sbjct: 181 WDEEISSGALDVHIYNLRQKLGKQFIRTVHGVGYALGQVEK 221 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 162 bits (411), Expect = 6e-43 Identities = 89/224 (39%), Positives = 134/224 (59%), Gaps = 5/224 (2%) Query: 1 MRILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGL 60 MRILL+EDD + L L+ + VD TD + YD V+LD+ LP+LDG+ Sbjct: 1 MRILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGI 60 Query: 61 EVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRRY 120 + Q+WRS+ +P+L++TARDT+++++ GL +GADDY+ KP L E+ AR++AL+RR Sbjct: 61 TLCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRRGC 120 Query: 121 GYHHSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSRSSIEEKLSS 180 V+E ++LD + V +N+ +SLT +EY +LEL + N RVLSRS I + + Sbjct: 121 ATCQPVLEWGPIRLDPSTYEVSYDNEVLSLTRKEYSILELLLRNGRRVLSRSMIIDSIWK 180 Query: 181 WDEEISSGALDVHIYNLRQK-----LGKQFIRTVHGVGYALGQV 219 + + VH+ +LRQK L I TVHG+GY L + Sbjct: 181 LESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGYRLANL 224 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 136 bits (343), Expect = 5e-35 Identities = 87/228 (38%), Positives = 126/228 (55%), Gaps = 14/228 (6%) Query: 1 MRILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTS--APYDAVVLDLTLPKLD 58 MRILL+ED+ +G ++ L + VDW TDG L + Y ++D LP L Sbjct: 1 MRILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLS 60 Query: 59 GLEVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRR 118 GLE+ Q+ R+ +PVL+LTA + RV+GL +GADDYL KPF +AE+ ARL+AL RR Sbjct: 61 GLELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAELLARLRALQRR 120 Query: 119 RYGYHHSVIEQAGVKLD--QNQRSVW------LNNQPISLTSREYKLLELFMLNKDRVLS 170 + ++ LD N SV L Q I+LT RE+++ + M N +R++S Sbjct: 121 SPQFQPQILTLGNFSLDPSNNLLSVTISEPLNLERQEIALTVREFQIFQYLMQNPERIIS 180 Query: 171 RSSIEEKLSSWDEEISSGALDVHIYNLRQKLGKQF----IRTVHGVGY 214 S I ++L DEE S + + +R+KL +Q I+TV G GY Sbjct: 181 GSKIRQQLWDLDEEPMSNVVAAQMRLIRRKLAQQNCPCPIKTVPGQGY 228 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 134 bits (336), Expect = 3e-34 Identities = 80/221 (36%), Positives = 125/221 (56%), Gaps = 7/221 (3%) Query: 1 MRILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSA--PYDAVVLDLTLPKLD 58 MR+LL+ED+ +G L+ L + + VDW DG + L Y + D +P L Sbjct: 1 MRLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLS 60 Query: 59 GLEVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRR 118 GLE+ Q+ R +P+L+LTA+D + +RV+GL +GADDYL KPF +AE+ ARL++L RR Sbjct: 61 GLELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAELLARLRSLQRR 120 Query: 119 RYGYHHSVIEQAGVKLDQNQRSVWLNNQP-ISLTSREYKLLELFMLNKDRVLSRSSIEEK 177 ++ LD +V Q I+LT++E++LLE FM + ++LS I+ + Sbjct: 121 SPELQPQQLQVGQWWLDYGTFAVVTPEQARITLTAKEFQLLEYFMKHPQQILSSEQIKNQ 180 Query: 178 LSSWDEEISSGALDVHIYNLRQKLGK----QFIRTVHGVGY 214 L + E +S + + LR+KL + I TV+G+GY Sbjct: 181 LWALSAESTSNVVAAQVRLLRRKLEEYSHGNLIETVYGLGY 221 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 133 bits (335), Expect = 4e-34 Identities = 83/227 (36%), Positives = 122/227 (53%), Gaps = 16/227 (7%) Query: 3 ILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLEV 62 ILL++D+N + L L G +D GKTG+A + YD ++LD LP++ GLE+ Sbjct: 4 ILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGLEI 63 Query: 63 LQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRRYGY 122 +Q R PVL LTA+DTLD+RV GL +G DDYL KPF L E+ AR++AL+RR+ + Sbjct: 64 CRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFELRELLARVRALLRRQ-SH 122 Query: 123 HHSVIEQAG-----------VKLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSR 171 ++ E G V LD + + Q I+L+ +E LL LF+ ++LS Sbjct: 123 GETITETLGAVKNNLLSVNNVSLDVANQVAYCQGQRIALSEKEVALLTLFLQAPGQILSH 182 Query: 172 SSIEEKLSSWDEEISSGALDVHIYNLRQKL----GKQFIRTVHGVGY 214 I L + SS L + LR+K+ + I +V+G GY Sbjct: 183 EEIYSHLWPGESPPSSNVLAALVRLLRRKIEQPNAPRLINSVYGKGY 229 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 128 bits (322), Expect = 1e-32 Identities = 80/228 (35%), Positives = 126/228 (55%), Gaps = 14/228 (6%) Query: 2 RILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLE 61 RIL+I+DD I + + I L G+ V DG G A D ++LDL LPK+DG Sbjct: 3 RILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFT 62 Query: 62 VLQQWRSNHQ--DVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRR- 118 V Q+ R + + D+PVL+LTA + ++++G SGADDYL KPF + E+ AR++AL+RR Sbjct: 63 VCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLRRT 122 Query: 119 ----RYGYHHSVIEQAGVKL-DQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSRSS 173 + H ++ Q + L + ++W + I LT E++LL + + +S S Sbjct: 123 DRIPQAAKHSEILNQGPLTLVPERFEAIWF-GKSIKLTHLEFELLHCLLQRHGQTVSPSD 181 Query: 174 IEEKLSSWDEEISSGALDVHIYNLRQKL-----GKQFIRTVHGVGYAL 216 I ++ ++ + + VHI +LR KL +FI+TV+G GY L Sbjct: 182 ILREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTVYGAGYCL 229 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 128 bits (321), Expect = 2e-32 Identities = 69/219 (31%), Positives = 128/219 (58%), Gaps = 4/219 (1%) Query: 2 RILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLE 61 R+L++E++ + +++ L G+ V DG G P D ++++ LP + GLE Sbjct: 4 RVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLE 63 Query: 62 VLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRRYG 121 + ++ R +P++++TA+D ++ERV GL +GADDY+ KPF E AR++ +RR + Sbjct: 64 LCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRRTHT 123 Query: 122 YHHSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSRSSIEEKLSSW 181 V++ A ++ +++ R + ++ I LT++E++LL+ + + +VL+R I E++ + Sbjct: 124 TSDEVLQFADLRFNRSTREIQRGDRLIDLTAKEFELLDYLLSHARQVLTREQILERVWGY 183 Query: 182 DEEISSGALDVHIYNLRQKL----GKQFIRTVHGVGYAL 216 D S ++V+I LR KL + I+TV GVGY L Sbjct: 184 DFMGDSNIIEVYIRYLRLKLEAAGEPRLIQTVRGVGYVL 222 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 124 bits (312), Expect = 2e-31 Identities = 76/228 (33%), Positives = 128/228 (56%), Gaps = 14/228 (6%) Query: 5 LIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLEVLQ 64 +++D+ I L+ L+ +G+ V DG+ +A + D VVLD+ +PKLDG V Q Sbjct: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 Query: 65 QWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRR--RYGY 122 + R D+P+++LTA + +R+ GL+ GADDY+ KPF+ E+ AR+++++RR + G Sbjct: 61 ELRKE-SDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKNGM 119 Query: 123 ----HHSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSRSSIEEKL 178 V++ A +++D N+R V+ ++ I LT E+ LLEL + SRS I +++ Sbjct: 120 PGIPSSGVLQIATIRIDTNKRQVYKGDERIRLTGMEFSLLELLVSRSGEPFSRSEILQEV 179 Query: 179 SSWDEE--ISSGALDVHIYNLRQKL-----GKQFIRTVHGVGYALGQV 219 + E + + +DVHI LR KL + I T G GY ++ Sbjct: 180 WGYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGYLFQRI 227 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 122 bits (307), Expect = 7e-31 Identities = 79/231 (34%), Positives = 130/231 (56%), Gaps = 15/231 (6%) Query: 2 RILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTS-------APYDAVVLDLTL 54 RIL++ED+ I + + L + G+ V DG+ +A L A D ++LD+ L Sbjct: 32 RILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIML 91 Query: 55 PKLDGLEVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQA 114 P+++GL+V + R + P+LI++A+ + E+V GL+ GADDY+ KPF+L E+ AR +A Sbjct: 92 PQVNGLDVCRSLRFGGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARCRA 151 Query: 115 LIRRRYGYHHSVI---EQAGVKLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSR 171 +IRR+ +++ + + L + V + + +SL +E++LLELFM RV SR Sbjct: 152 MIRRQGLAGNNIAPFRKFRDLVLYPQECRVLMRGEEVSLAPKEFRLLELFMSYPRRVWSR 211 Query: 172 SSIEEKLSSWDEEISSGALDVHIYNLRQKLGK-----QFIRTVHGVGYALG 217 + E + D S +DVHI LR+KL + +++ TV G GY G Sbjct: 212 EQLIEHIWGIDFMGDSKTVDVHIRWLREKLEQDPSQPEYLVTVRGFGYRFG 262 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 120 bits (302), Expect = 3e-30 Identities = 87/226 (38%), Positives = 123/226 (54%), Gaps = 14/226 (6%) Query: 3 ILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLEV 62 IL++EDD I ++ L + F DG+TG+ D +VLDL LPKLDGLEV Sbjct: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLEV 73 Query: 63 LQQWRSN--HQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRR-- 118 + R +D +L+LTA+ +R+ GL +GADDYL KPF+ E+ AR++AL+RR Sbjct: 74 CTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRALLRRQL 133 Query: 119 RYGYHHSVIEQAG---VKLDQNQRSVWLNN--QPISLTSREYKLLELFMLNKDRVLSRSS 173 R G I + V LDQ+Q S + + + + LT E+ LL FM RV +R+ Sbjct: 134 RQGQPVGQIYRTNHFQVDLDQHQASRYQGDRQEELELTGLEFNLLATFMSYPGRVWNRTQ 193 Query: 174 IEEKLSSWDEEISSGALDVHIYNLRQKL-----GKQFIRTVHGVGY 214 + EKL D +D HI LR+K+ FI+TV G+GY Sbjct: 194 LIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGY 239 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 111 bits (277), Expect = 2e-27 Identities = 67/219 (30%), Positives = 125/219 (57%), Gaps = 7/219 (3%) Query: 2 RILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLE 61 +IL++ED+ I + + L++ + V +D KT + + P ++LD LP G++ Sbjct: 4 KILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKENP-KLILLDWMLPGRSGIQ 62 Query: 62 VLQ--QWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRR 119 +Q + + ++ +P+++LTA+ T ++ + L +GADDY+ KPF+ + AR++A+ RR Sbjct: 63 FIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWRRI 122 Query: 120 YGYHHSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSRSSIEEKLS 179 Y I+ + +D+N + V+ Q I+L+S E+KLL FM + ++V SR + ++ Sbjct: 123 YEQQSQFIQIDELSIDENAQRVFFQQQEINLSSTEFKLLHFFMRHPEKVYSREQLLNRIW 182 Query: 180 SWDEEISSGALDVHIYNLRQKLG----KQFIRTVHGVGY 214 D E+ +D +I LR+ L + +I+TV G GY Sbjct: 183 HNDLEVEYRTVDSYIRRLRRNLAPFQCEHYIQTVRGSGY 221 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 110 bits (275), Expect = 4e-27 Identities = 79/230 (34%), Positives = 130/230 (56%), Gaps = 22/230 (9%) Query: 2 RILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLE 61 ++LL++DD + L L GF V+ +G + L + Y V+LD+ +PKL+G+E Sbjct: 3 KLLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKLNES-YKLVLLDVMMPKLNGIE 61 Query: 62 VLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRRYG 121 L++ R +VPV++LTAR +RV GL+ GADD L KPF E+ AR++A++RR Sbjct: 62 TLKEIRKV-SNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRRSAS 120 Query: 122 YHHS-----VIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSRSSI-- 174 ++ ++ G+ L + N + ++LT E+K+L L + +K V+SR + Sbjct: 121 PSNNISNVEILSFDGITLHFSHGIATYNEENLNLTDYEFKILCLLLKSKGNVVSREELSL 180 Query: 175 ---EEKLSSWDEEISSGALDVHIYNLRQKLGKQ-----FIRTVHGVGYAL 216 E+ L+ +D +LD+HI NLR+KL K+ + +T+ G GYAL Sbjct: 181 EVMEKPLTPFDR-----SLDMHISNLRRKLPKRKNKPSWFKTLRGKGYAL 225 >SYNE-PCC-01-000877 sll1330 Length = 250 Score = 89.7 bits (221), Expect = 7e-21 Identities = 68/219 (31%), Positives = 110/219 (50%), Gaps = 10/219 (4%) Query: 3 ILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLEV 62 I ++E + + + L L + G+ V + A + V+D L DG+E+ Sbjct: 6 ISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGDGIEL 65 Query: 63 LQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRRYGY 122 + HQ + + IL+A+DT + V GL++GADDYL KPF + E AR++ LIRR Sbjct: 66 CRWLYQQHQSM-IFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRRVRTV 124 Query: 123 HHSVIEQAGV-KLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSRSSIEEKLSSW 181 ++ GV K+D QR V + LT +E+ LL + + LSR+ + + +W Sbjct: 125 AAPLLLDYGVLKIDLVQRRVEYQGNFVDLTPQEFSLLYVLTQAEGSALSRTELLRR--AW 182 Query: 182 DEEISS-GALDVHIYNLRQKL-----GKQFIRTVHGVGY 214 E I + +D H+ +LR+K+ I+TV VGY Sbjct: 183 PEAIDNPRTIDTHVLSLRKKIETDPRQPSLIQTVRNVGY 221 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 77.0 bits (188), Expect = 5e-17 Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 15/233 (6%) Query: 2 RILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLE 61 +IL++ED+ + N L+ G+ V +G L + + VV+D+ LP +GL Sbjct: 5 KILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGLL 64 Query: 62 VLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRRYG 121 + ++ R +P++ LT RD +++ GL+ GADDYL KPF E+ R + L+ R Sbjct: 65 LARELREE-LSLPLIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHRAMP 123 Query: 122 YH-------HSVIEQAGVKLDQNQRS-VWLNNQPISLTSREYKLLELFMLNKDRVLSRSS 173 + G KLD N S + Q L E++ + F N ++ +R Sbjct: 124 HQEKENTFGREFYRFNGWKLDLNSHSLITPEGQEFKLPRSEFRAMLHFCENPGKLQTREE 183 Query: 174 IEEKLSSWDEEISSGALDVHIYNLRQKL-----GKQFIRTVHGVGYAL-GQVE 220 + +K++ + + +DV I +R+ I T+HG GY G +E Sbjct: 184 LLKKMTGRELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGYRFCGDIE 236 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 75.5 bits (184), Expect = 1e-16 Identities = 56/202 (27%), Positives = 103/202 (50%), Gaps = 17/202 (8%) Query: 3 ILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLEV 62 +LL++DD + ++ L G+ V +G+ + LT+ D +V D+ +P++DG Sbjct: 10 LLLVDDDPNLLLLVKDYLEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAF 69 Query: 63 LQQWRSNHQD--VPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRRY 120 ++Q R N +PV+ L+A+ RVKGL GAD Y+ KPF E+AA++Q+ +R+ Sbjct: 70 IEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQA- 128 Query: 121 GYHHSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSRSSIEEKLSS 180 +++ L+ N R + + LT E K+++L + L+ I + L Sbjct: 129 ---DRLLQHNNHPLEDNARVQVARD--VELTPTETKVIQLVA----QGLANREIADHL-- 177 Query: 181 WDEEISSGALDVHIYNLRQKLG 202 ++S ++ H+ N+ K G Sbjct: 178 ---KVSQRTVESHVSNMLNKTG 196 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 72.8 bits (177), Expect = 9e-16 Identities = 39/112 (34%), Positives = 66/112 (58%), Gaps = 5/112 (4%) Query: 24 GFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLEVLQQWRSNHQ--DVPVLILTAR 81 G++ + T G + +T A D ++LDL +P +DGLEV + + + Q D+PV+ LTA Sbjct: 41 GYSTTFVTSGPEALQRVTQAQPDLILLDLMMPGMDGLEVCDRLKQDPQTRDIPVIFLTAS 100 Query: 82 DTLDERVKGLQSGADDYLCKPFALAEVAARLQA---LIRRRYGYHHSVIEQA 130 + + ++ GA DY+ KPF+ E+ AR++ L + R HH+++EQA Sbjct: 101 NEKQDLLQAFAKGAVDYVTKPFSPPELLARVKTHLELKQTRDNLHHTLLEQA 152 Score = 63.2 bits (152), Expect = 7e-13 Identities = 36/114 (31%), Positives = 66/114 (57%), Gaps = 4/114 (3%) Query: 4 LLIEDDNLIGNGL-QIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGL-- 60 +L+ +DNLI + ++ L KLG+ VD +G+ ++AL YD V++D+ +P++DGL Sbjct: 742 ILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTA 801 Query: 61 -EVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQ 113 E +++ + + ++ +TA +R + L SG +DY+ KP L + LQ Sbjct: 802 TEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKPIRLEALQQALQ 855 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 67.4 bits (163), Expect = 4e-14 Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 8/116 (6%) Query: 3 ILLIEDDNLIGNGLQIG---LTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDG 59 ILL++D + N LQ+ L LG+ V T GK + L D ++LD+ +P +DG Sbjct: 11 ILLVDD---LPNNLQLLSDLLINLGYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDG 67 Query: 60 LEVLQQWRSNH--QDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQ 113 +V + + QD+P++ ++A ++VK + G DY+ KPF + EV AR++ Sbjct: 68 YQVCEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQIEEVVARIE 123 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 61.6 bits (148), Expect = 2e-12 Identities = 32/102 (31%), Positives = 57/102 (55%), Gaps = 2/102 (1%) Query: 3 ILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLEV 62 ILL+ED+ + LT G V +G+ + LTS YDA+++D+ +P L+G + Sbjct: 720 ILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYDA 779 Query: 63 LQQWRSN--HQDVPVLILTARDTLDERVKGLQSGADDYLCKP 102 + R H+++P++ +TA ++ K L +G +D+L KP Sbjct: 780 TRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKP 821 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 59.7 bits (143), Expect = 8e-12 Identities = 33/118 (27%), Positives = 63/118 (53%), Gaps = 4/118 (3%) Query: 2 RILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLE 61 ++LL+ED+ + + L L + G+ V DG+ + S +++D++LP +DG Sbjct: 6 KVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGWT 65 Query: 62 VLQQWRSNHQD---VPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALI 116 +Q + H D +P++ LTA +R + + +G DDY KP + + +++ALI Sbjct: 66 ATKQIKG-HPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEALI 122 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 59.7 bits (143), Expect = 8e-12 Identities = 38/120 (31%), Positives = 65/120 (54%), Gaps = 3/120 (2%) Query: 3 ILLIEDDNLIGNGLQIGLTKLG-FAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLE 61 +LL++D+ + +Q L G F VD + L V+ D+ +P++DG + Sbjct: 58 LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGYQ 117 Query: 62 VLQQWRSN--HQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRR 119 LQ+ R + Q +PV+ LTAR +R++G Q+G D +L KPF E+ A ++ L+ R+ Sbjct: 118 FLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLARQ 177 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 59.7 bits (143), Expect = 8e-12 Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 2/117 (1%) Query: 3 ILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLEV 62 +LL+ED + + L G+ V DG + L + D VVLD+ +P+++G EV Sbjct: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 Query: 63 LQQWRSNHQ--DVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIR 117 ++ +S+ + +VPV++ +++ +R G++ GAD Y+ KPF E+ ++ L+R Sbjct: 90 CRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLLR 146 >SYNE-PCC-01-000608 sll0921 Length = 222 Score = 59.7 bits (143), Expect = 8e-12 Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 33/217 (15%) Query: 1 MRILLIEDDNLIGNGLQIGLTKLGFAVDWF---TDGKTGMAALTSAPYDAVVLDLTLPKL 57 +RI LIED++LI GLQ LT + + +W +G+ G+ + D V++D+ LP + Sbjct: 4 IRIALIEDEDLIRQGLQDALT-MEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDM 62 Query: 58 DGLEVLQQWRSN--HQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQAL 115 +G++V QQ + + V+ILT D + + +GAD Y K +R + L Sbjct: 63 NGIDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKD-------SRTELL 115 Query: 116 IRRRYGYH-----------HSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLELFMLN 164 I H V+ A S + LT RE ++L+L + Sbjct: 116 IEAIQATHGGFAWIDPAIARIVLAHAPGAEPSEPSSPSRTSLSYGLTERELEVLQLIVDG 175 Query: 165 KDRVLSRSSIEEKLSSWDEEISSGALDVHIYNLRQKL 201 S + I EKL I+ G + H+ N+ KL Sbjct: 176 ----CSNADIAEKL-----YITVGTVKTHVRNILNKL 203 >SYNE-PCC-01-001075 sll1592 Length = 226 Score = 58.9 bits (141), Expect = 1e-11 Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 28/214 (13%) Query: 1 MRILLIEDDNLIGNGL------QIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTL 54 +RILL+EDD L GL + GL G A DG+T +A + +D V+LD+ L Sbjct: 8 IRILLVEDDELFRLGLVTRLSQEPGLDVAGEA----EDGETAIAYVNQQLFDVVILDVGL 63 Query: 55 PKLDGLEVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQA 114 P + G+E Q + H +PVLILT+ + +++ A Y K A + +++ Sbjct: 64 PGIGGIEACHQIKKIHPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLAIRS 123 Query: 115 LIRRRYGYHHSVIEQAGVKLDQNQRSVWLNNQPIS-------LTSREYKLLELFMLNKDR 167 + + + ++ + + + P++ LT RE ++L L K Sbjct: 124 VAAGAFWWDAIASQEIQTAFQHSSSTGAV--LPLADADGENPLTKRELEILSLVAKGK-- 179 Query: 168 VLSRSSIEEKLSSWDEEISSGALDVHIYNLRQKL 201 S I ++L I+ G + VH++ + +KL Sbjct: 180 --SNQEIADEL-----YIAPGTVRVHVHTILRKL 206 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 58.2 bits (139), Expect = 2e-11 Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 2/113 (1%) Query: 2 RILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLE 61 RILL+ED+ + L +GF VD +G + L + Y V++D+ +P++DG+E Sbjct: 926 RILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIE 985 Query: 62 VLQQWRSN--HQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARL 112 R N + +P++ +TA +R + LQ+G +D+L KP E+ +L Sbjct: 986 ATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEELWNKL 1038 Score = 44.7 bits (104), Expect = 3e-07 Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 9/111 (8%) Query: 2 RILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSA-----PYDAVVLDLTLPK 56 R+L+++D++ ++ L ++ F V+ G + L A P+ V +D +P Sbjct: 772 RVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPN 831 Query: 57 LDGLEVLQQWRS---NHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFA 104 +DGLEV ++ ++ NHQ + I+TA + VK G DD L KP + Sbjct: 832 MDGLEVARRLKAMGLNHQP-SIFIVTAYGREELFVKAKSLGIDDVLVKPIS 881 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 55.8 bits (133), Expect = 1e-10 Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 8/132 (6%) Query: 3 ILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPY--DAVVLDLTLPKLDGL 60 IL++ED+ +I + L+ + + +G + L S D ++ D+ +P++DG Sbjct: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 Query: 61 EVLQQWRSNHQD--VPVLILTARDTLDERVKGLQSGADDYLCKPF----ALAEVAARLQA 114 ++ + N + +P + LTA T+ + KG+ SGADDYL KPF L V +RLQ Sbjct: 64 GLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSRLQK 123 Query: 115 LIRRRYGYHHSV 126 + Y S+ Sbjct: 124 QAKLSAFYQGSI 135 >SYNE-PCC-01-001160 sll1708 Length = 226 Score = 55.5 bits (132), Expect = 1e-10 Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 21/207 (10%) Query: 1 MRILLIEDDNLIGNGLQ--IGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLD 58 M+IL++EDD L+ GL+ +G + + +G + D +V+D+ LP LD Sbjct: 17 MKILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPGLD 76 Query: 59 GLEVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAE----VAARLQA 114 G+E +Q + + +++LT+ +E + L SGAD Y K L +AA Sbjct: 77 GIEATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIAAAQDG 136 Query: 115 LIRRRYGYHHSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSRSSI 174 V+E + + Q V SL+ RE +L+L + K S I Sbjct: 137 ATYLDPQIARVVVENLKPPVPEGQADV------SSLSEREIDVLKLIVEGK----SNQEI 186 Query: 175 EEKLSSWDEEISSGALDVHIYNLRQKL 201 + L +S+ + H+ + KL Sbjct: 187 AQTL-----YLSTNTIKTHVRGIMNKL 208 >HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator protein (narP) Length = 208 Score = 55.5 bits (132), Expect = 1e-10 Identities = 60/211 (28%), Positives = 91/211 (43%), Gaps = 34/211 (16%) Query: 1 MRILLIEDDNLIGNGLQ--IGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLD 58 +++LLI+D L+ G++ + L V + G G++ D ++LDL + L Sbjct: 5 LKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLS 64 Query: 59 GLEVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCK---PFALAEVAARLQAL 115 GL+ L+ R+ D +LILT D ++ + +GAD YL K P L E R Sbjct: 65 GLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKR---- 120 Query: 116 IRRRYGYHHSVIEQAGVKLDQNQRSVWL-----NNQPISLTSREYKLLELFMLNKDRVLS 170 I Q V L + +++ L +N SLT RE +L LS Sbjct: 121 -----------IAQGEVILSDSIKNLLLERTHEDNPLDSLTDREMGVLRQIATG----LS 165 Query: 171 RSSIEEKLSSWDEEISSGALDVHIYNLRQKL 201 I +L IS + VHI NL +KL Sbjct: 166 NKQIAAQLF-----ISEETVKVHIRNLLRKL 191 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 52.8 bits (125), Expect = 9e-10 Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 2/117 (1%) Query: 2 RILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLE 61 +IL+++DD + L++ L K G V+ T+G+ + + V+LD +P +DG Sbjct: 13 KILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGFA 72 Query: 62 VLQQWRSNHQDVP--VLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALI 116 Q +Q+ VL++T D + ++GA DY+ KP A + R++ L+ Sbjct: 73 CCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLL 129 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 52.0 bits (123), Expect = 2e-09 Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 2/113 (1%) Query: 2 RILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLE 61 ++L+++D L+ LT LGF V +G+ +A S +++D+ +P LDG Sbjct: 419 KVLVVDDRPESRLLLRQLLTSLGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRS 478 Query: 62 VLQQWRSNHQDVPVLI--LTARDTLDERVKGLQSGADDYLCKPFALAEVAARL 112 Q+ +++ Q +I LTA ER + L +G DD+L KPF E+ A L Sbjct: 479 TTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIALL 531 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 48.1 bits (113), Expect = 2e-08 Identities = 30/114 (26%), Positives = 58/114 (50%), Gaps = 4/114 (3%) Query: 4 LLIEDDNLIGNGLQIG-LTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLEV 62 +L+ +DNL+ + L LG+ V +G+ + AL YD V++D+ +P +DG+ Sbjct: 1192 ILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGITA 1251 Query: 63 LQQWRSN---HQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQ 113 + R + ++ +TA +R + L +G D Y+ KP ++ ++ LQ Sbjct: 1252 CRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQLRKVLQ 1305 Score = 41.6 bits (96), Expect = 2e-06 Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 12/99 (12%) Query: 2 RILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAP-YDAVVLDLTLPKLDGL 60 ++L+++D+ LQ G FT G++ + P DA +LDL +P +DG+ Sbjct: 1035 QVLIVDDNETNRRILQDQCQAWGLVCHCFTSGESALDWFARCPDLDAAILDLQMPNMDGI 1094 Query: 61 EVLQQWR--SNHQDVPVLILTARDTLDERVKGLQSGADD 97 + R + +D+P+++L++ GL +GAD+ Sbjct: 1095 TLAHHLRQFAQGKDLPIILLSS---------GLVAGADE 1124 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 43.9 bits (102), Expect = 4e-07 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 3/103 (2%) Query: 4 LLIEDDNLIGNGLQIGL-TKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLEV 62 +L+ DD + L I L GF ++ ++G+ +A S + +D+ +P +DG E Sbjct: 632 ILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYEA 691 Query: 63 LQQWRSNHQD--VPVLILTARDTLDERVKGLQSGADDYLCKPF 103 + + + V+ LTA +E+ L +G DD+L KPF Sbjct: 692 TKYIKGQVKGNATAVVALTASVLEEEKAIVLSAGCDDFLRKPF 734 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.319 0.137 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,012 Number of Sequences: 78 Number of extensions: 944 Number of successful extensions: 77 Number of sequences better than 1.0e-05: 31 Number of HSP's better than 0.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 14 Number of HSP's gapped (non-prelim): 36 length of query: 221 length of database: 48,235 effective HSP length: 59 effective length of query: 162 effective length of database: 43,633 effective search space: 7068546 effective search space used: 7068546 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 91 (39.7 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MGEN-G37-01-000221 MG218 cytadherence accessory protein (hmw2) (1805 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value MGEN-G37-01-000221 MG218 cytadherence accessory protein (hmw2) 3217 0.0 SCER-S28-01-000806 ORFP:YDL058W USO1, Chr IV from 345664-351036 135 9e-34 SCER-S28-01-002651 ORFP:YHR023W MYO1, Chr VIII from 151657-157443 117 4e-28 MPNE-M12-01-000474 gi|13508213|ref|NP_110162.1| coiled coil pro... 108 1e-25 MGEN-G37-01-000335 MG328 conserved hypothetical protein 103 5e-24 SCER-S28-01-001306 ORFP:YDR285W ZIP1, Chr IV from 1032427-1035054 76 1e-15 SYNE-PCC-01-000727 sll1120 69 1e-13 SYNE-PCC-01-001071 sll1583 59 2e-10 SCER-S28-01-001667 ORFP:YER008C SEC3, Chr V from 167807-171817,... 55 1e-09 SYNE-PCC-01-000943 sll1424 44 3e-06 >MGEN-G37-01-000221 MG218 cytadherence accessory protein (hmw2) Length = 1805 Score = 3217 bits (8340), Expect = 0.0 Identities = 1680/1805 (93%), Positives = 1680/1805 (93%) Query: 1 MKPFDKKPSLQPIYDIGFDDGYLQSEYEKNRSKTDVDKIENQLLKEIKSLEDELKNLKGL 60 MKPFDKKPSLQPIYDIGFDDGYLQSEYEKNRSKTDVDKIENQLLKEIKSLEDELKNLKGL Sbjct: 1 MKPFDKKPSLQPIYDIGFDDGYLQSEYEKNRSKTDVDKIENQLLKEIKSLEDELKNLKGL 60 Query: 61 KNQAEDNPELDKKINHLEVDLNRLVNEYKNFQFQKNHMVDKVSELDNLTRFYKNELTRLQ 120 KNQAEDNPELDKKINHLEVDLNRLVNEYKNFQFQKNHMVDKVSELDNLTRFYKNELTRLQ Sbjct: 61 KNQAEDNPELDKKINHLEVDLNRLVNEYKNFQFQKNHMVDKVSELDNLTRFYKNELTRLQ 120 Query: 121 QENADFLNSKYANLANFQANYHNKLNDFHRLIENQNQTINRLNQKINGNQNLIDNNVALL 180 QENADFLNSKYANLANFQANYHNKLNDFHRLIENQNQTINRLNQKINGNQNLIDNNVALL Sbjct: 121 QENADFLNSKYANLANFQANYHNKLNDFHRLIENQNQTINRLNQKINGNQNLIDNNVALL 180 Query: 181 QNPNITVEKKNYLLNVIDQLYNELDQLENQKRLLSIEYENTYRELVSADNELQNVYENID 240 QNPNITVEKKNYLLNVIDQLYNELDQLENQKRLLSIEYENTYRELVSADNELQNVYENID Sbjct: 181 QNPNITVEKKNYLLNVIDQLYNELDQLENQKRLLSIEYENTYRELVSADNELQNVYENID 240 Query: 241 QNQIQFKHQYQTYRDELSQLERKIQLTKQELVDKESALRVKIDDADFYINARLAELDDVA 300 QNQIQFKHQYQTYRDELSQLERKIQLTKQELVDKESALRVKIDDADFYINARLAELDDVA Sbjct: 241 QNQIQFKHQYQTYRDELSQLERKIQLTKQELVDKESALRVKIDDADFYINARLAELDDVA 300 Query: 301 KQLSFQDGITKQNAQHVEDKLVALNKEKDRLNTQKEAFFNLRQSALIDINKLQQENELFA 360 KQLSFQDGITKQNAQHVEDKLVALNKEKDRLNTQKEAFFNLRQSALIDINKLQQENELFA Sbjct: 301 KQLSFQDGITKQNAQHVEDKLVALNKEKDRLNTQKEAFFNLRQSALIDINKLQQENELFA 360 Query: 361 KHLEHQQNEFEQKQSDSLLKLETEYKALQHKINEFKNESATKSEELLNQERELFEKRREI 420 KHLEHQQNEFEQKQSDSLLKLETEYKALQHKINEFKNESATKSEELLNQERELFEKRREI Sbjct: 361 KHLEHQQNEFEQKQSDSLLKLETEYKALQHKINEFKNESATKSEELLNQERELFEKRREI 420 Query: 421 DTLLTQASLEYEHQRESSQLLKDKQNEVKQHFQNLEYAKKELDKERNLLDQQKKVDSEAI 480 DTLLTQASLEYEHQRESSQLLKDKQNEVKQHFQNLEYAKKELDKERNLLDQQKKVDSEAI Sbjct: 421 DTLLTQASLEYEHQRESSQLLKDKQNEVKQHFQNLEYAKKELDKERNLLDQQKKVDSEAI 480 Query: 481 FQLKEKVAQERKELEELYLVKKQKQDQKENELLFFEKQLKQHQADFENELEAKQQELFEA 540 FQLKEKVAQERKELEELYLVKKQKQDQKENELLFFEKQLKQHQADFENELEAKQQELFEA Sbjct: 481 FQLKEKVAQERKELEELYLVKKQKQDQKENELLFFEKQLKQHQADFENELEAKQQELFEA 540 Query: 541 KHALERSFIKLEDKEKDLNTKAQQIANEFSQLKTDKSKSADFELMLQNEYENLQQEKQKL 600 KHALERSFIKLEDKEKDLNTKAQQIANEFSQLKTDKSKSADFELMLQNEYENLQQEKQKL Sbjct: 541 KHALERSFIKLEDKEKDLNTKAQQIANEFSQLKTDKSKSADFELMLQNEYENLQQEKQKL 600 Query: 601 FQERTYFERNAAVLSNXXXXXXXXXXXXXXTLDQLTKSFEQERLINQREHKELVASVEKQ 660 FQERTYFERNAAVLSN TLDQLTKSFEQERLINQREHKELVASVEKQ Sbjct: 601 FQERTYFERNAAVLSNRLQQKREELLQQKETLDQLTKSFEQERLINQREHKELVASVEKQ 660 Query: 661 KEILGKKLQDFSQTSLNASKNLAEREMAIKFKEKEIEATEKQLLNDVNNAEVIQADLAQL 720 KEILGKKLQDFSQTSLNASKNLAEREMAIKFKEKEIEATEKQLLNDVNNAEVIQADLAQL Sbjct: 661 KEILGKKLQDFSQTSLNASKNLAEREMAIKFKEKEIEATEKQLLNDVNNAEVIQADLAQL 720 Query: 721 NQSLNQERSELQNAKQRIADFHNDSLKKLNEYELSLQKRLQELQTLEANQKQHSYQNQAY 780 NQSLNQERSELQNAKQRIADFHNDSLKKLNEYELSLQKRLQELQTLEANQKQHSYQNQAY Sbjct: 721 NQSLNQERSELQNAKQRIADFHNDSLKKLNEYELSLQKRLQELQTLEANQKQHSYQNQAY 780 Query: 781 FEGELDKLNREKQAFLNLRKKQTMEVDAIKQRLSDKHQALNMQQAELDRKTHELNNAFLN 840 FEGELDKLNREKQAFLNLRKKQTMEVDAIKQRLSDKHQALNMQQAELDRKTHELNNAFLN Sbjct: 781 FEGELDKLNREKQAFLNLRKKQTMEVDAIKQRLSDKHQALNMQQAELDRKTHELNNAFLN 840 Query: 841 HDADQKSLQDQLATVKETQKLIDLERSALLEKQREFAENVAGFKRHWSNKTSQLQKIYXX 900 HDADQKSLQDQLATVKETQKLIDLERSALLEKQREFAENVAGFKRHWSNKTSQLQKIY Sbjct: 841 HDADQKSLQDQLATVKETQKLIDLERSALLEKQREFAENVAGFKRHWSNKTSQLQKIYEL 900 Query: 901 XXXXXXXXXXXXXXXXIAFSDLQKDYQVFELQKDQEFRQIEAKQRELDKLAEKNNQVKLE 960 IAFSDLQKDYQVFELQKDQEFRQIEAKQRELDKLAEKNNQVKLE Sbjct: 901 TKKQESEQTQKETELKIAFSDLQKDYQVFELQKDQEFRQIEAKQRELDKLAEKNNQVKLE 960 Query: 961 LDNRFQALQNQKQDTVQAQLELEREQHQLNLEQTAFNQANESLLKQREQLTKKIQAFHYE 1020 LDNRFQALQNQKQDTVQAQLELEREQHQLNLEQTAFNQANESLLKQREQLTKKIQAFHYE Sbjct: 961 LDNRFQALQNQKQDTVQAQLELEREQHQLNLEQTAFNQANESLLKQREQLTKKIQAFHYE 1020 Query: 1021 LKKRNQFLALKGKRLFAKEQDQQRKDQEINWRFKQFEKEYTDFDXXXXXXXXXXXXXXXX 1080 LKKRNQFLALKGKRLFAKEQDQQRKDQEINWRFKQFEKEYTDFD Sbjct: 1021 LKKRNQFLALKGKRLFAKEQDQQRKDQEINWRFKQFEKEYTDFDEAKKRELEELEKIRRS 1080 Query: 1081 XSQSNVELERKREKLATDFTNLNKVQHNTQINRDQLNSQIRQFLLERKNFQRFSNEANAK 1140 SQSNVELERKREKLATDFTNLNKVQHNTQINRDQLNSQIRQFLLERKNFQRFSNEANAK Sbjct: 1081 LSQSNVELERKREKLATDFTNLNKVQHNTQINRDQLNSQIRQFLLERKNFQRFSNEANAK 1140 Query: 1141 KAFLIKRLRSFASNLKLQKEALAIQKLEFDKRDEQQKKELQQATLQLEQFKFEKQNFDIE 1200 KAFLIKRLRSFASNLKLQKEALAIQKLEFDKRDEQQKKELQQATLQLEQFKFEKQNFDIE Sbjct: 1141 KAFLIKRLRSFASNLKLQKEALAIQKLEFDKRDEQQKKELQQATLQLEQFKFEKQNFDIE 1200 Query: 1201 KQRQLVAIKTQCEKLSDEKKALNQKLVELKNLSQTYLANKNKAEYSQQQLQQKYTNLLDL 1260 KQRQLVAIKTQCEKLSDEKKALNQKLVELKNLSQTYLANKNKAEYSQQQLQQKYTNLLDL Sbjct: 1201 KQRQLVAIKTQCEKLSDEKKALNQKLVELKNLSQTYLANKNKAEYSQQQLQQKYTNLLDL 1260 Query: 1261 KENLERTKDQLDKKHRSIFARLTKFANDLRFEKKQLLKAQRIVDDKNRLLKENERNLHFL 1320 KENLERTKDQLDKKHRSIFARLTKFANDLRFEKKQLLKAQRIVDDKNRLLKENERNLHFL Sbjct: 1261 KENLERTKDQLDKKHRSIFARLTKFANDLRFEKKQLLKAQRIVDDKNRLLKENERNLHFL 1320 Query: 1321 SNETERKRAVLEDQISYFEKQRKQATDAILASHKEVKKKEGELQKLLVELETRKTKLNND 1380 SNETERKRAVLEDQISYFEKQRKQATDAILASHKEVKKKEGELQKLLVELETRKTKLNND Sbjct: 1321 SNETERKRAVLEDQISYFEKQRKQATDAILASHKEVKKKEGELQKLLVELETRKTKLNND 1380 Query: 1381 FAKFSRQREEFENQRXXXXXXXXXXXXXXNSNNFKTKAIQEIENSYKRGMEELNFQKKEF 1440 FAKFSRQREEFENQR NSNNFKTKAIQEIENSYKRGMEELNFQKKEF Sbjct: 1381 FAKFSRQREEFENQRLKLLELQKTLQTQTNSNNFKTKAIQEIENSYKRGMEELNFQKKEF 1440 Query: 1441 DKNKSRLYEYFRKMRDEIERKESQVKLVLKETQRKANLLEAQANKLNIEKNTIDFKEKEL 1500 DKNKSRLYEYFRKMRDEIERKESQVKLVLKETQRKANLLEAQANKLNIEKNTIDFKEKEL Sbjct: 1441 DKNKSRLYEYFRKMRDEIERKESQVKLVLKETQRKANLLEAQANKLNIEKNTIDFKEKEL 1500 Query: 1501 KAFKDKVDQDIDSTXXXXXXXXXXXXXXXXXXXSLIERERAINSKDSLLNKKIETIKRQL 1560 KAFKDKVDQDIDST SLIERERAINSKDSLLNKKIETIKRQL Sbjct: 1501 KAFKDKVDQDIDSTNKQRKELNELLNENKLLQQSLIERERAINSKDSLLNKKIETIKRQL 1560 Query: 1561 HDKEMRVLRLVDRMKLAEQKYQTEINRLRTQTFDSEKQDIKNFFPPLFKINGNDMAFPYL 1620 HDKEMRVLRLVDRMKLAEQKYQTEINRLRTQTFDSEKQDIKNFFPPLFKINGNDMAFPYL Sbjct: 1561 HDKEMRVLRLVDRMKLAEQKYQTEINRLRTQTFDSEKQDIKNFFPPLFKINGNDMAFPYL 1620 Query: 1621 YPWLYPQQKQDDNTLQIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKLDQIQLESQLN 1680 YPWLYPQQKQDDNTLQIR KKLDQIQLESQLN Sbjct: 1621 YPWLYPQQKQDDNTLQIRQLFEQQLQFMQQRYENELNELRRQRNLLEKKLDQIQLESQLN 1680 Query: 1681 NKQSEFSKVESMMEKLLEKTESRLNDFDQKINYLTKKVNQHNTYQPSSYQPTPSYQDSDK 1740 NKQSEFSKVESMMEKLLEKTESRLNDFDQKINYLTKKVNQHNTYQPSSYQPTPSYQDSDK Sbjct: 1681 NKQSEFSKVESMMEKLLEKTESRLNDFDQKINYLTKKVNQHNTYQPSSYQPTPSYQDSDK 1740 Query: 1741 QQLLFRIQELEKQNLXXXXXXXXXXXXXXPTSFAAPNITKQQQIAQLNAEINNIKRLIAQ 1800 QQLLFRIQELEKQNL PTSFAAPNITKQQQIAQLNAEINNIKRLIAQ Sbjct: 1741 QQLLFRIQELEKQNLFQQQFQPAPAVVQQPTSFAAPNITKQQQIAQLNAEINNIKRLIAQ 1800 Query: 1801 KAASK 1805 KAASK Sbjct: 1801 KAASK 1805 >SCER-S28-01-000806 ORFP:YDL058W USO1, Chr IV from 345664-351036 Length = 1790 Score = 135 bits (341), Expect = 9e-34 Identities = 201/1063 (18%), Positives = 439/1063 (41%), Gaps = 177/1063 (16%) Query: 35 DVDKIENQLLK---EIKSLEDELKNL-----KGLKNQAEDNPELDKKINHLEVDLNRLVN 86 +V+K++ Q K EI SL+ E ++ + L ++ ELD+K L + L Sbjct: 731 EVEKLQRQCTKLKGEITSLQTETESTHENLTEKLIALTNEHKELDEKYQILNSSHSSLKE 790 Query: 87 EYKNFQFQKNHMVDKVSELDNLTRFYKNELTRLQQENADFLNSKYANLANFQANYHNKLN 146 + + + ++ D + E+ L ++ L +EN L +++ H K Sbjct: 791 NFSILETELKNVRDSLDEMTQL----RDVLETKDKENQ-------TALLEYKSTIH-KQE 838 Query: 147 DFHRLIENQNQTINRLNQKINGNQNLIDNNVALLQNPNITVEKKNYLLNVIDQLYNELDQ 206 D + +E +TI +K N + ++ L VE+ L Q + Sbjct: 839 DSIKTLEKGLETILSQKKKAEDGINKMGKDLFALSREMQAVEENCKNL----QKEKDKSN 894 Query: 207 LENQKRLLSIEYE------------NTYRELVSADNELQNVYENIDQNQIQFKHQYQTYR 254 + +QK S++ + E+ N L E+I + +++K ++Q++ Sbjct: 895 VNHQKETKSLKEDIAAKITEIKAINENLEEMKIQCNNLSKEKEHISKELVEYKSRFQSHD 954 Query: 255 DELSQLERKIQLTKQELVDKESALRVKIDDADFYINARLAELDDVAKQLSFQDGITKQNA 314 + +++L K++ D + AE + + K + + Sbjct: 955 NLVAKLTEKLKSLANNYKDMQ------------------AENESLIKAVEESKNESSIQL 996 Query: 315 QHVEDKLVALNKEKDRLNTQKEAFFNLRQSALIDINKLQQENELFAKHLEHQQNEFEQKQ 374 ++++K+ ++++EK+ ++ + + I+ L+Q E + ++E+E + Sbjct: 997 SNLQNKIDSMSQEKENFQIERGSIEKNIEQLKKTISDLEQTKEEIISKSDSSKDEYESQI 1056 Query: 375 SDSLLKLETEYKALQHKINEFKNESATKSE---ELL---NQERELFEKRREIDTLLTQAS 428 S KLET A +N+ + T+ E EL N + EL K + L + Sbjct: 1057 SLLKEKLETATTANDENVNKISELTKTREELEAELAAYKNLKNELETKLETSEKALKEVK 1116 Query: 429 LEYEHQRESSQLLKDKQNEVKQHFQNLEYAKKELDKE-RNLLDQQKKVD----------S 477 EH +E L+ + E KQ +L + L+KE +L Q KK + + Sbjct: 1117 ENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIANKERQYN 1176 Query: 478 EAIFQLKEKVAQERKELEELYLVKKQKQDQKENELLFF------EKQLKQHQADFEN--- 528 E I QL +++ ++E E + K+K D+ E E+ + LK+ + D N Sbjct: 1177 EEISQLNDEITSTQQENESI----KKKNDELEGEVKAMKSTSEEQSNLKKSEIDALNLQI 1232 Query: 529 -ELEAKQQ----ELFEAKHALERSFIKLEDKEKDLNTKAQQIANEFSQLKTDKSKSADFE 583 EL+ K + L E+ ++E +K+++ + + N K ++++ +LK + K++ + Sbjct: 1233 KELKKKNETNEASLLESIKSVESETVKIKELQDECNFKEKEVSELEDKLKASEDKNSKY- 1291 Query: 584 LMLQNEYENLQQE-----------KQKLFQERTYFERNAAVLSNXXXXXXXXXXXXXXTL 632 L LQ E E +++E +K+ E++ + LS L Sbjct: 1292 LELQKESEKIKEELDAKTTELKIQLEKITNLSKAKEKSESELSRLKKTSSEERKNAEEQL 1351 Query: 633 DQL-------TKSFEQER-LINQ------REHKELVASVE-------KQKEILGKKL--- 668 ++L ++FE+ER L+N+ +E+ E + ++E + E+ K++ Sbjct: 1352 EKLKNEIQIKNQAFEKERKLLNEGSSTITQEYSEKINTLEDELIRLQNENELKAKEIDNT 1411 Query: 669 -QDFSQTSLNASKNLAEREMAIK--------FKEK-----------------EIEATEKQ 702 + + SL+ + L E++ IK +K+K ++E+ ++Q Sbjct: 1412 RSELEKVSLSNDELLEEKQNTIKSLQDEILSYKDKITRNDEKLLSIERDNKRDLESLKEQ 1471 Query: 703 LLNDVNNAEVIQADLAQLNQSLNQERSELQNAKQRIADFHNDSLKKLNEYELSLQKRLQE 762 L + ++ L +L + ++E++EL+ +K+ + + E + S++ + Sbjct: 1472 LRAAQESKAKVEEGLKKLEEESSKEKAELEKSKEMMKKLESTIESNETELKSSMETIRKS 1531 Query: 763 LQTLEANQK---------QHSYQNQAYFEGELDKLNREKQAFLNLRKKQTMEVDAIKQRL 813 + LE ++K QH + E +K E ++ L + K E++ +KQ L Sbjct: 1532 DEKLEQSKKSAEEDIKNLQHEKSDLISRINESEKDIEELKSKLRIEAKSGSELETVKQEL 1591 Query: 814 SDKHQALNMQQAE---LDRKTHELNNAFLNHDADQKSLQDQLATVKETQKLIDLERSALL 870 ++ + + + E L K ++ + A+ KS Q++ + K ++ E + Sbjct: 1592 NNAQEKIRINAEENTVLKSKLEDIERELKDKQAEIKSNQEEKELLTSRLKELEQELDSTQ 1651 Query: 871 EKQREFAENVAGFKRHWSNKTSQLQKIYXXXXXXXXXXXXXXXXXXIAFSDLQKDYQVFE 930 +K ++ E R + + SQL + ++DL Q ++ Sbjct: 1652 QKAQKSEEERRAEVRKFQVEKSQLDE--------------KAMLLETKYNDLVNKEQAWK 1697 Query: 931 LQKDQEFRQIEAKQRELDKLAEKNNQVKLELDNRFQALQNQKQ 973 +D + +++++E++KLA++ + +K E +A +++ + Sbjct: 1698 RDEDTVKKTTDSQRQEIEKLAKELDNLKAENSKLKEANEDRSE 1740 Score = 129 bits (324), Expect = 8e-32 Identities = 205/1073 (19%), Positives = 441/1073 (41%), Gaps = 167/1073 (15%) Query: 642 ERLINQREHKELVASVEKQKEILGKKLQDFSQTSLNASKNLAEREMAIKFKEKEIEATEK 701 E IN+ +E V +++Q L ++ + + +NL E+ +A+ + KE++ + Sbjct: 721 EEPINKISFEE-VEKLQRQCTKLKGEITSLQTETESTHENLTEKLIALTNEHKELDE-KY 778 Query: 702 QLLNDVN-----NAEVIQADLAQLNQSLNQERSELQNAKQRIADFHNDSLKKLNEYELSL 756 Q+LN + N +++ +L + SL+ E+ + + ++ L EY+ ++ Sbjct: 779 QILNSSHSSLKENFSILETELKNVRDSLD----EMTQLRDVLETKDKENQTALLEYKSTI 834 Query: 757 QKRLQELQTLEANQKQHSYQNQAYFEGELDKLNREKQAFLNLRKKQTMEVDAIKQRLSDK 816 K+ ++TLE + Q + +G ++K+ ++ A + E+ A+++ Sbjct: 835 HKQEDSIKTLEKGLETILSQKKKAEDG-INKMGKDLFAL-------SREMQAVEENCK-- 884 Query: 817 HQALNMQQAELDRKTHELNNAFLNHDADQKSLQDQLATVKETQKLIDLERSALLEKQREF 876 N+Q+ E + + +NH + KSL++ +A K I+ LE+ + Sbjct: 885 ----NLQK--------EKDKSNVNHQKETKSLKEDIAAKITEIKAINEN----LEEMKIQ 928 Query: 877 AENVAGFKRHWSNKTSQLQKIYXXXXXXXXXXXXXXXXXXIAFSDLQKDYQ----VFELQ 932 N++ K H S + + + + + D+Q + + E Sbjct: 929 CNNLSKEKEHISKELVEYKSRFQSHDNLVAKLTEKLKSLANNYKDMQAENESLIKAVEES 988 Query: 933 KDQEFRQIEAKQRELDKLAEKNNQVKLE---LDNRFQALQNQKQDTVQAQLEL------- 982 K++ Q+ Q ++D ++++ ++E ++ + L+ D Q + E+ Sbjct: 989 KNESSIQLSNLQNKIDSMSQEKENFQIERGSIEKNIEQLKKTISDLEQTKEEIISKSDSS 1048 Query: 983 -EREQHQLNLEQ------TAFNQAN----ESLLKQREQLTKKIQAF-----HYELKKRNQ 1026 + + Q++L + T N N L K RE+L ++ A+ E K Sbjct: 1049 KDEYESQISLLKEKLETATTANDENVNKISELTKTREELEAELAAYKNLKNELETKLETS 1108 Query: 1027 FLALKGKRLFAKEQDQQRKDQEINWRFKQFEKEYTDFDXXXXXXXXXXXXXXXXXSQSNV 1086 ALK KE ++ K+++I Q EKE T+ ++N+ Sbjct: 1109 EKALKE----VKENEEHLKEEKI-----QLEKEATE------------TKQQLNSLRANL 1147 Query: 1087 E-LERKREKLATDFTNLNKVQHNTQINRDQLNSQIRQFLLERKNFQRFSNEANAKKAFLI 1145 E LE++ E LA L K + Q N +I Q E + Q+ NE+ KK Sbjct: 1148 ESLEKEHEDLAAQ---LKKYEEQIANKERQYNEEISQLNDEITSTQQ-ENESIKKK---- 1199 Query: 1146 KRLRSFASNLKLQKEALAIQKLEFDKRDEQQKKELQQATLQLEQFKFEKQNFDIEKQRQL 1205 N +L+ E A++ +++ +K E+ LQ+++ K + + + + Sbjct: 1200 --------NDELEGEVKAMKSTS-EEQSNLKKSEIDALNLQIKELKKKNETNEASLLESI 1250 Query: 1206 VAIKTQCEKLSDEKKALNQKLVELKNLSQTYLANKNKAEYSQQQLQQKYTNLLDLKENLE 1265 +++++ K+ + + N K E+ L A+++K KY L+L++ E Sbjct: 1251 KSVESETVKIKELQDECNFKEKEVSELEDKLKASEDK--------NSKY---LELQKESE 1299 Query: 1266 RTKDQLDKKHRSIFARLTKFANDLRFEKKQLLKAQRIVDDKNRLLKENERNLHFLSNETE 1325 + K++LD K + +L K N + ++K + R+ + K E L L NE + Sbjct: 1300 KIKEELDAKTTELKIQLEKITNLSKAKEKSESELSRLKKTSSEERKNAEEQLEKLKNEIQ 1359 Query: 1326 RKRAVLEDQISYFEKQRKQATDAILASHKEVKKK----EGELQKLLVELETRKTKLNN-- 1379 K FEK+RK + +E +K E EL +L E E + +++N Sbjct: 1360 IKNQA-------FEKERKLLNEGSSTITQEYSEKINTLEDELIRLQNENELKAKEIDNTR 1412 Query: 1380 -DFAKFSRQREEF-ENQRXXXXXXXXXXXXXXNSNNFKTKAIQEIENSYKRGMEELNFQK 1437 + K S +E E ++ + + + IE KR +E L Q Sbjct: 1413 SELEKVSLSNDELLEEKQNTIKSLQDEILSYKDKITRNDEKLLSIERDNKRDLESLKEQL 1472 Query: 1438 KEFDKNKSRLYEYFRKMRDEIERKESQVKLVLKETQRKANLLEAQANKLNIEKNTIDFKE 1497 + ++K+++ E +K+ +E +++++++ + ++ + +E+ +L TI + Sbjct: 1473 RAAQESKAKVEEGLKKLEEESSKEKAELEKSKEMMKKLESTIESNETELKSSMETIRKSD 1532 Query: 1498 KELKAFKDKVDQDIDSTXXXXXXXXXXXXXXXXXXXSLIERERA---------------- 1541 ++L+ K ++DI + L + R Sbjct: 1533 EKLEQSKKSAEEDIKNLQHEKSDLISRINESEKDIEELKSKLRIEAKSGSELETVKQELN 1592 Query: 1542 -------INSKDS-LLNKKIETIKRQLHDKEMRVLR-------LVDRMKLAEQKYQTEIN 1586 IN++++ +L K+E I+R+L DK+ + L R+K EQ+ + Sbjct: 1593 NAQEKIRINAEENTVLKSKLEDIERELKDKQAEIKSNQEEKELLTSRLKELEQELDSTQQ 1652 Query: 1587 RLRTQTFDSEKQDIKNFFPPLFKINGNDMAFPYLYPWLYPQQ---KQDDNTLQ 1636 + + ++ + + +++ F +++ M Y L ++ K+D++T++ Sbjct: 1653 KAQ-KSEEERRAEVRKFQVEKSQLDEKAMLLETKYNDLVNKEQAWKRDEDTVK 1704 Score = 128 bits (322), Expect = 1e-31 Identities = 198/1134 (17%), Positives = 443/1134 (39%), Gaps = 145/1134 (12%) Query: 446 NEVKQHFQNLEYAKKELDKERNLLDQQKKVDSEAIFQLKEKVAQERKELEELYLVKKQKQ 505 + +KQ ++ ++K +++++ L + + ++ + + + + Sbjct: 660 SRIKQFKKDSYFSKVDMNEDSILTPELDETGLPKVYFSTYFIQLFNENIYRIRTALSHDP 719 Query: 506 DQKENELLFFEK--QLKQHQADFENELEAKQQELFEAKHALERSFIKLEDKEKDLNTKAQ 563 D++ + FE+ +L++ + E+ + Q E L I L ++ K+L+ K Q Sbjct: 720 DEEPINKISFEEVEKLQRQCTKLKGEITSLQTETESTHENLTEKLIALTNEHKELDEKYQ 779 Query: 564 QIANEFSQLKTDKSKSADFELMLQNEYENLQQEKQKLFQERTYFERNAAVLSNXXXXXXX 623 + + S LK + S +L+ E +N++ ++ Q R E Sbjct: 780 ILNSSHSSLKENFS-------ILETELKNVRDSLDEMTQLRDVLETKDKENQTALLEYKS 832 Query: 624 XXXXXXXTLDQLTKSFEQERLINQREHKELVASVEKQKEILGKKLQDFSQTSLNASKNLA 683 ++ L K E L +++ ++ + + K L +++Q + N K Sbjct: 833 TIHKQEDSIKTLEKGLETI-LSQKKKAEDGINKMGKDLFALSREMQAVEENCKNLQK--- 888 Query: 684 EREMAIKFKEKEIEATEKQLLNDVNNAEVIQADLAQLNQSLNQERSELQNAKQRIADF-- 741 E++ + +KE ++ ++ + + + I +L ++ N E ++ + + ++ Sbjct: 889 EKDKSNVNHQKETKSLKEDIAAKITEIKAINENLEEMKIQCNNLSKEKEHISKELVEYKS 948 Query: 742 ----HNDSLKKLNEYELSLQKRLQELQT--------LEANQKQHSYQNQAYFEGELDKLN 789 H++ + KL E SL +++Q +E ++ + S Q + + ++D ++ Sbjct: 949 RFQSHDNLVAKLTEKLKSLANNYKDMQAENESLIKAVEESKNESSIQ-LSNLQNKIDSMS 1007 Query: 790 REKQAFLNLRKKQTMEVDAIKQRLSDKHQALNMQQAELDRKTHELNNAFLNHDADQKSLQ 849 +EK+ F R ++ +K+ +SD Q ++ D E +++ L+ Sbjct: 1008 QEKENFQIERGSIEKNIEQLKKTISDLEQTKEEIISKSDSSKDE-------YESQISLLK 1060 Query: 850 DQLATVKETQKLIDLERSALLEKQREFAENVAGFKRHWSNKTSQLQKIYXXXXXXXXXXX 909 ++L T + S L + + E +A +K + ++L+ Sbjct: 1061 EKLETATTANDENVNKISELTKTREELEAELAAYKNLKNELETKLE-------------- 1106 Query: 910 XXXXXXXIAFSDLQKDYQVFELQKDQEFRQIEAKQRELDKLAEKNNQVKLELDNRFQALQ 969 A +++++ + + +K Q ++ +++L+ L ++ E ++ L+ Sbjct: 1107 ----TSEKALKEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLK 1162 Query: 970 NQKQDTVQAQLELEREQHQLNLEQTAFNQANESLLKQREQLTKKIQAFHY---------- 1019 ++ + + E QLN E T+ Q NES+ K+ ++L +++A Sbjct: 1163 KYEEQIANKERQYNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNLKK 1222 Query: 1020 -----------ELKKRNQFLALKGKRLFAKEQDQQRKDQEINWRFKQFEKEYTDFDXXXX 1068 ELKK+N+ + + K +E+ EKE ++ + Sbjct: 1223 SEIDALNLQIKELKKKNETNEASLLESIKSVESETVKIKELQDECNFKEKEVSELEDKLK 1282 Query: 1069 XXXXXXXXXXXXXSQSNV---ELERKREKLATDF---TNLNKVQHNTQINRDQLNSQIRQ 1122 +S EL+ K +L TNL+K + ++ +L + Sbjct: 1283 ASEDKNSKYLELQKESEKIKEELDAKTTELKIQLEKITNLSKAKEKSESELSRLKKTSSE 1342 Query: 1123 FLLERKN----FQRFSNEANAKKAFLIK--RLRSFASNLKLQKEALAIQKLE-----FDK 1171 ERKN ++ NE K K +L + S+ Q+ + I LE Sbjct: 1343 ---ERKNAEEQLEKLKNEIQIKNQAFEKERKLLNEGSSTITQEYSEKINTLEDELIRLQN 1399 Query: 1172 RDEQQKKELQQATLQLEQFKFEKQNFDIEKQRQLVAIKTQCEKLSDEKKALNQKLVELKN 1231 +E + KE+ +LE+ EKQ + +++ + D+ ++KL+ ++ Sbjct: 1400 ENELKAKEIDNTRSELEKVSLSNDELLEEKQNTIKSLQDEILSYKDKITRNDEKLLSIER 1459 Query: 1232 LSQTYLANKNKAEYSQQQLQQKYTNLLDLKENLERTKDQLDKKHRSIFARLTKFANDLRF 1291 NK E ++QL+ + ++E L++ +++ K+ +L Sbjct: 1460 ------DNKRDLESLKEQLRAAQESKAKVEEGLKKLEEESSKEKA-----------ELEK 1502 Query: 1292 EKKQLLKAQRIVDDKNRLLKENERNLHFLSNETERKRAVLEDQISYFEKQRKQATDAILA 1351 K+ + K + ++ LK + + + E+ + E+ I + ++ I Sbjct: 1503 SKEMMKKLESTIESNETELKSSMETIRKSDEKLEQSKKSAEEDIKNLQHEKSDLISRINE 1562 Query: 1352 SHKEVKKKEGELQ---KLLVELETRKTKLNNDFAKFSRQREEFENQRXXXXXXXXXXXXX 1408 S K++++ + +L+ K ELET K +LNN K EE Sbjct: 1563 SEKDIEELKSKLRIEAKSGSELETVKQELNNAQEKIRINAEE------------------ 1604 Query: 1409 XNSNNFKTKAIQEIENSYKRGMEELNFQKKEFDKNKSRLYEYFRKM--------RDEIER 1460 N +++IE K E+ ++E + SRL E +++ + E ER Sbjct: 1605 ---NTVLKSKLEDIERELKDKQAEIKSNQEEKELLTSRLKELEQELDSTQQKAQKSEEER 1661 Query: 1461 KESQVKLVLKETQ--RKANLLEAQANKLNIEKNTIDFKEKELKAFKDKVDQDID 1512 + K ++++Q KA LLE + N L ++ E +K D Q+I+ Sbjct: 1662 RAEVRKFQVEKSQLDEKAMLLETKYNDLVNKEQAWKRDEDTVKKTTDSQRQEIE 1715 Score = 76.3 bits (186), Expect = 8e-16 Identities = 94/447 (21%), Positives = 197/447 (44%), Gaps = 66/447 (14%) Query: 29 KNRSKTDVDKIENQLLKEIKSLEDELKNLKG---LKNQAEDNP-------------ELDK 72 K +S++++ +++ +E K+ E++L+ LK +KNQA + E + Sbjct: 1326 KEKSESELSRLKKTSSEERKNAEEQLEKLKNEIQIKNQAFEKERKLLNEGSSTITQEYSE 1385 Query: 73 KINHLEVDLNRLVNEYKNFQFQKNHMVDKVSELDNLTRFYKNELTRLQQENADFLNSKYA 132 KIN LE +L RL NE N + K E+DN ++EL ++ N + L K Sbjct: 1386 KINTLEDELIRLQNE--------NEL--KAKEIDNT----RSELEKVSLSNDELLEEKQN 1431 Query: 133 NLANFQANYHNKLNDFHRLIENQNQTINRLNQKINGNQNLIDNNVALLQNPNITVEKKNY 192 + + Q +++ + I ++ + + + + + + Q VE+ Sbjct: 1432 TIKSLQ----DEILSYKDKITRNDEKLLSIERDNKRDLESLKEQLRAAQESKAKVEEG-- 1485 Query: 193 LLNVIDQLYNELDQLENQKRL---LSIEYENTYRELVSADNELQNVYENIDQNQIQFKHQ 249 L + ++ E +LE K + L E+ EL S+ ++ E ++Q++ + Sbjct: 1486 LKKLEEESSKEKAELEKSKEMMKKLESTIESNETELKSSMETIRKSDEKLEQSKKSAEED 1545 Query: 250 YQTYRDELSQLERKIQLTKQELVDKESALRVKIDDADFYINARLAELDDVAKQLSFQDGI 309 + + E S L +I +++++ + +S LR++ +EL+ V ++L+ Sbjct: 1546 IKNLQHEKSDLISRINESEKDIEELKSKLRIEAKSG--------SELETVKQELNNAQEK 1597 Query: 310 TKQNAQH---VEDKLVALNKE-KDRLNTQKEAFFNLRQSALIDINKLQQENELFAKHLEH 365 + NA+ ++ KL + +E KD+ Q E N + L+ + E EL + + Sbjct: 1598 IRINAEENTVLKSKLEDIERELKDK---QAEIKSNQEEKELLTSRLKELEQELDSTQQKA 1654 Query: 366 QQNEFEQKQS------------DSLLKLETEYKALQHKINEFKNESATKSEELLNQEREL 413 Q++E E++ + + LET+Y L +K +K + T + +Q +E+ Sbjct: 1655 QKSEEERRAEVRKFQVEKSQLDEKAMLLETKYNDLVNKEQAWKRDEDTVKKTTDSQRQEI 1714 Query: 414 FEKRREIDTLLTQASLEYEHQRESSQL 440 + +E+D L + S E + S++ Sbjct: 1715 EKLAKELDNLKAENSKLKEANEDRSEI 1741 >SCER-S28-01-002651 ORFP:YHR023W MYO1, Chr VIII from 151657-157443 Length = 1928 Score = 117 bits (292), Expect = 4e-28 Identities = 213/1080 (19%), Positives = 441/1080 (40%), Gaps = 163/1080 (15%) Query: 34 TDVDKIENQLLKEIKSLEDELKNLKGLKNQAED-----------NPELDKKINHLEVDLN 82 ++ D+I + L+ ++LE+ + ++GL+ + N EL K+I+ L D++ Sbjct: 938 SEKDEISREKLEVAQNLEEAHQKIQGLQETIREREATLEKLHSKNNELIKQISDLNCDIS 997 Query: 83 RLVNEYKNFQFQKNHMVDKVSELDNLTRFYKNELTRLQQENADFLNSKYANLANFQANYH 142 + Q + + K S+L +NE+ RL+ D +NSK + +F Sbjct: 998 K---------EQSSQSLIKESKLK-----LENEIKRLK----DVINSKEEEIKSFNDKLS 1039 Query: 143 NKLNDFH----RLIENQNQTINRLNQKINGNQNLIDNNVALLQNPNITVEK---KNYLLN 195 + D L +N N ++RL + N +L +N N EK N L N Sbjct: 1040 SSEEDLDIKLVTLEKNCNIAMSRLQSLVTENSDLRS------KNENFKKEKAALNNQLKN 1093 Query: 196 VIDQLYNELDQLENQKRLLSIEYENTYRELVSADNELQNVYENIDQNQIQFKHQYQTYRD 255 +L ++++N K+ L+ + + VS ++ + ++K YQ ++ Sbjct: 1094 KESELLKMKEKIDNHKKELA-TFSKQRDDAVSEHGKITAELKETRIQLTEYKSNYQKIKE 1152 Query: 256 ELSQLERKIQLTKQELVDKESALRVKIDDADFYINARLAELD-DVAKQLSFQDGITKQNA 314 E S +R+ TK++ K ++L ++D +++ EL+ +++++S Sbjct: 1153 EYSNFQRE---TKEQEQKKRNSLVESLND------SKIKELEARLSQEISLN-------- 1195 Query: 315 QHVEDKLVALNKEKDRLNTQKEAFFNLRQSALIDINKLQQENEL-FAKHLEHQQNEFEQK 373 Q++ ++ + E + +T++ ++ DI K + +L F + + +NE E+K Sbjct: 1196 QYLNKRISGNSVETNISSTRRSTSYSDDPLDKEDIIKKYYDLQLAFTEITRNLENEIEEK 1255 Query: 374 QSDSLLKLETEYKALQHKINEFKNESATKSEELLNQERELFEKRREIDTLLTQASLEYEH 433 ++ TE + + K ++ K + L Q+ + +D++L Sbjct: 1256 KNLISRLRFTETRLASSSFEDQKIKAQMKKLKKLIQD---MDPSIPLDSIL--------- 1303 Query: 434 QRESSQLLKDKQNEVKQHFQNLEYAKKELDKERNLLDQQKKVDSEAIFQLKEKVAQERKE 493 E DK++++ + ++Y K++LD E + S + ++ + Sbjct: 1304 -NEPLDNCPDKESDINKLMLEVDYLKRQLDIETRAHYDAENAISALHSKFRKIQGESSLS 1362 Query: 494 LEELYLVKKQKQDQKENELLFFEKQLKQHQADFENELEA----KQQELFEAKHALERSFI 549 ++Y +K + +++ L E +LK L K ++ +K+ E + Sbjct: 1363 SSDIYKLKFEASEERVKSL---EDKLKTMPLRDRTNLPVGDIIKNRDSI-SKYEEEIRYY 1418 Query: 550 KLEDKEKDLNTKAQQIANE----FSQLKTDKSKSADFELMLQNEYENLQQEKQKLFQERT 605 KLE N K Q+I NE SQL D +S E +L + + LQ++ + Sbjct: 1419 KLE------NYKLQEILNESNGKLSQLTLDLRQSKSKEALLSEQLDRLQKDLEST----- 1467 Query: 606 YFERNAAVLSNXXXXXXXXXXXXXXTLDQLTKSFE------QERLINQREHKELVASVEK 659 ER +LS+ T+ Q + FE Q + REH + E+ Sbjct: 1468 --ERQKELLSS--------------TIKQQKQQFENCMDDLQGNELRLREHIHALKQAEE 1511 Query: 660 QKEILGKKLQDFSQTSLNASKNLAEREMAIKFKEKEIEATEKQLLNDVNNAEVIQADLAQ 719 + + ++ + K + EREM + +++ T +L + +++ DLA Sbjct: 1512 DVKNMASIIEKLKTQNKQKEKLIWEREMERNDSDMQLQETLLELKRVQDVKKILSDDLAH 1571 Query: 720 LNQSLN--QERSELQNAKQRIADFHNDSLKKLN--EYELSLQKRLQELQTLEANQKQHSY 775 L + L+ ++RS+ + R+ + N SLK + E + K E T ++ K Sbjct: 1572 LKERLSAVEDRSQYTDEINRLKEELNCSLKAETNLKKEFATLKYKLETSTNDSEAKISDL 1631 Query: 776 QNQA-YFEGELDKLNREKQAFLNLRKKQ--------TMEVDAIKQRLSDKHQALNMQQAE 826 Q ++ ++ LN EK A ++L +K+ E +++K ++ + +++ Sbjct: 1632 LKQLDHYTKVVEMLNNEKDA-ISLAEKELYQKYEALNTECESLKGKIVSLTKIKQELESD 1690 Query: 827 LDRKTH--ELNNAFLNHDADQ-KSLQDQLATVKETQKLIDLERSALLEKQREFAENVAGF 883 L++KT +++NA L+ + K + +++ ++ET +L + S E + + G+ Sbjct: 1691 LNQKTDALQISNAALSSSTQKNKEITEKIKYLEETLQLQMEQNSRNGELVKTLQASCNGY 1750 Query: 884 KRHWSNKTSQLQKIYXXXXXXXXXXXXXXXXXXIAFSDLQKDYQVFELQKDQEFRQIEAK 943 K + ++ + +Y L D Q+ + K Sbjct: 1751 KDKFDDEKQKNIDLYEENQ---------------TLQKLNTDLQLQLKNLHERLSDTTEK 1795 Query: 944 QRELDKLAEKNNQVKLELDNRFQALQNQKQDTVQAQLELEREQHQL---NLEQTAFNQAN 1000 L K+ E N V LE D +++ ++ K LER +L N +QT + Sbjct: 1796 NAWLSKIHELENMVSLETDLKYEEMKKNK--------SLERAVEELQTKNSQQTDVIELA 1847 Query: 1001 ESLLKQREQLTKKIQAFHYELKKRNQFLALKGKRLFAKEQDQQRKDQEINWRFKQFEKEY 1060 + E+ T K +A +L+K L+ K+ + K QE+ + ++ Y Sbjct: 1848 NKNRSEFEEATLKYEAQISDLEKYISQQELEMKKSIRDNSSYRDKVQEMAQEIEFWKSRY 1907 Score = 107 bits (266), Expect = 4e-25 Identities = 220/1149 (19%), Positives = 461/1149 (40%), Gaps = 138/1149 (12%) Query: 368 NEFEQKQSDSLLKLETEYKALQHKINEFKNESATKSEELLNQERELFEKRREIDTLLTQA 427 NE K + L ++E++ K L+ K + NE +++LLNQE+E K + + + Sbjct: 867 NEQINKLKNDLQEMESKKKFLEEKNQKTVNE-LENTQDLLNQEKENLRKNESLLNRVKTS 925 Query: 428 SLEYEHQRESSQLLKDKQNEVKQHF-QNLEYAKKELD------KERNL-LDQQKKVDSEA 479 S + Q + KD+ + K QNLE A +++ +ER L++ ++E Sbjct: 926 SETLQKQFDDLVSEKDEISREKLEVAQNLEEAHQKIQGLQETIREREATLEKLHSKNNEL 985 Query: 480 IFQLKEKVAQERKELEELYLVKKQKQDQKENELLFFEKQLKQHQADFENELEAKQQELFE 539 I Q+ + KE L+K+ K + ENE+ K+LK E E+++ +L Sbjct: 986 IKQISDLNCDISKEQSSQSLIKESKL-KLENEI----KRLKDVINSKEEEIKSFNDKLSS 1040 Query: 540 AKHALERSFIKLEDKEKDLNTKAQQIANEFSQLKTDKSKSADFELMLQNEYENLQQEKQK 599 ++ L+ + LE ++ Q + E S L++ + L N+ +N + E K Sbjct: 1041 SEEDLDIKLVTLEKNCNIAMSRLQSLVTENSDLRSKNENFKKEKAALNNQLKNKESELLK 1100 Query: 600 LFQERTYFERNAAVLSNXXXXXXXXXXXXXXTLDQLTKSFEQERLINQREHKELVASVEK 659 + ++ ++ A S L + T+ E N ++ KE ++ ++ Sbjct: 1101 MKEKIDNHKKELATFSKQRDDAVSEHGKITAELKE-TRIQLTEYKSNYQKIKEEYSNFQR 1159 Query: 660 QKEILGKKLQDFSQTSLNASKNLAEREMAIKFKEKEIEATEKQLLNDVNNAEVIQADLAQ 719 + + +K ++ SLN SK +E+ + + E + Q LN + ++ +++ Sbjct: 1160 ETKEQEQKKRNSLVESLNDSKI---KELEARLSQ---EISLNQYLNKRISGNSVETNISS 1213 Query: 720 LNQSLNQERSELQNAKQRIADFHNDSLKKLNEYELSLQKRLQELQTLEANQKQHSYQNQA 779 +S + L D +KK + +L+ + + L+ E +K++ Sbjct: 1214 TRRSTSYSDDPLDK---------EDIIKKYYDLQLAFTEITRNLEN-EIEEKKNLISRLR 1263 Query: 780 YFEGELDKLNREKQAFLNLRKKQTMEVDAIKQRLSDKHQALNMQQAELDRKTHELNNAFL 839 + E L + E Q KK +K+ + D ++ + LN Sbjct: 1264 FTETRLASSSFEDQKIKAQMKK-------LKKLIQDMDPSIPLDSI--------LNEPLD 1308 Query: 840 NHDADQKSLQDQLATVKETQKLIDLERSALLEKQREFAENVAGFKRHWSNKTSQLQKIYX 899 N + + + V ++ +D+E A + + + + F++ + IY Sbjct: 1309 NCPDKESDINKLMLEVDYLKRQLDIETRAHYDAENAISALHSKFRKIQGESSLSSSDIYK 1368 Query: 900 XXXXXXXXXXXXXXX----------XXIAFSDLQKDYQVFELQKDQEFRQIEAKQRELDK 949 + D+ K+ + ++E R + + +L + Sbjct: 1369 LKFEASEERVKSLEDKLKTMPLRDRTNLPVGDIIKNRDSIS-KYEEEIRYYKLENYKLQE 1427 Query: 950 LAEKNN----QVKLEL--DNRFQALQNQKQDTVQAQLELEREQHQLNLEQTAFNQANESL 1003 + ++N Q+ L+L +AL +++ D +Q LE Q +L + ++ Sbjct: 1428 ILNESNGKLSQLTLDLRQSKSKEALLSEQLDRLQKDLESTERQKEL---------LSSTI 1478 Query: 1004 LKQREQLTKKIQAFH-YELKKRNQFLALKGKR--------LFAKEQDQQRKDQEINWRFK 1054 +Q++Q + EL+ R ALK + K + Q ++ +++ W Sbjct: 1479 KQQKQQFENCMDDLQGNELRLREHIHALKQAEEDVKNMASIIEKLKTQNKQKEKLIW--- 1535 Query: 1055 QFEKEYTDFDXXXXXXXXXXXXXXXXXSQSNVELERKREKLATDFTNLNKVQHNTQINR- 1113 + E E D D + +L +E+L+ ++ Q+ +INR Sbjct: 1536 EREMERNDSDMQLQETLLELKRVQDVKKILSDDLAHLKERLSAVE---DRSQYTDEINRL 1592 Query: 1114 -DQLNSQIR-------QFLLERKNFQRFSNEANAKKAFLIKRLRSFASNLKL---QKEAL 1162 ++LN ++ +F + + +N++ AK + L+K+L + +++ +K+A+ Sbjct: 1593 KEELNCSLKAETNLKKEFATLKYKLETSTNDSEAKISDLLKQLDHYTKVVEMLNNEKDAI 1652 Query: 1163 AIQKLEFDKRDEQQKKELQQATLQLEQFKFEKQNFDIEKQRQLVAIKTQCEKLSDEKKAL 1222 ++ + E ++ E E + ++ KQ + + ++ A++ LS + Sbjct: 1653 SLAEKELYQKYEALNTECESLKGKIVSLTKIKQELESDLNQKTDALQISNAALSSSTQKN 1712 Query: 1223 NQKLVELKNLSQTYLANKNKAEYSQQQLQQKYTN---LLDLKENLERTKDQLD-KKHRSI 1278 + ++K L +T Q Q++Q N + L+ + KD+ D +K ++I Sbjct: 1713 KEITEKIKYLEETL----------QLQMEQNSRNGELVKTLQASCNGYKDKFDDEKQKNI 1762 Query: 1279 FARLTKFANDLRFEKKQLLKAQRIVDDKNRLLKENERNLHFLSNETERKRAVLEDQISYF 1338 DL +E+ Q L Q++ D LK NLH ++T K A L +I Sbjct: 1763 ---------DL-YEENQTL--QKLNTDLQLQLK----NLHERLSDTTEKNAWLS-KIHEL 1805 Query: 1339 EKQRKQATDAILASHKEVKKKEGELQKLLVELETRKTKLNNDFAKFSRQREEFENQRXXX 1398 E TD ++E+KK + L++ + EL+T+ ++ + ++ R EFE Sbjct: 1806 ENMVSLETDL---KYEEMKKNKS-LERAVEELQTKNSQQTDVIELANKNRSEFEEATLKY 1861 Query: 1399 XXXXXXXXXXXNSNNFKTKAIQEIENSYKRGMEELNFQKKEFDKNKSRLYEYFRKMRDEI 1458 + + K +SY+ ++E+ Q+ EF K++ YE I Sbjct: 1862 EAQISDLEKYISQQELEMKKSIRDNSSYRDKVQEM-AQEIEFWKSR---YESTMIGSKNI 1917 Query: 1459 ERKESQVKL 1467 + +Q K+ Sbjct: 1918 DSNNAQSKI 1926 Score = 106 bits (265), Expect = 6e-25 Identities = 252/1299 (19%), Positives = 520/1299 (40%), Gaps = 231/1299 (17%) Query: 101 KVSELDNLTRFYK-NELTRLQQENADFLNSKYANLA--------NFQANYHNKLNDFHRL 151 KV ++ N F+K L L+++ LN+ L + YH + R+ Sbjct: 767 KVYKIGNTKLFFKAGVLADLEKQKDVKLNNIMIKLTATIRGYTVRKEITYHLQKLKKTRV 826 Query: 152 IENQNQTINRLNQKINGNQNLIDNNVALLQNPNITVEKKNYLLNVIDQLYNELDQLENQK 211 I N + NRL K + NL LL + N K + I++L N+L ++E++K Sbjct: 827 IGNTFRLYNRL-VKEDPWFNLFIRIKPLLTSSNDMTRTKKFN-EQINKLKNDLQEMESKK 884 Query: 212 RLLSIEYENTYRELVSADNELQNVYENIDQNQI---QFKHQYQTYR---DELSQLERKIQ 265 + L + + T EL + + L EN+ +N+ + K +T + D+L + +I Sbjct: 885 KFLEEKNQKTVNELENTQDLLNQEKENLRKNESLLNRVKTSSETLQKQFDDLVSEKDEIS 944 Query: 266 LTKQELVDKESALRVKIDDADFYINARLAELDDVAKQLSFQDGITKQNAQHVEDKLVALN 325 K E+ KI I R A L+ K S + + KQ + D ++ Sbjct: 945 REKLEVAQNLEEAHQKIQGLQETIREREATLE---KLHSKNNELIKQ----ISDLNCDIS 997 Query: 326 KEKDRLNTQKEAFFNLRQSA--LID-INKLQQENELFAKHLEHQQNEFEQK--------- 373 KE+ + KE+ L L D IN ++E + F L + + + K Sbjct: 998 KEQSSQSLIKESKLKLENEIKRLKDVINSKEEEIKSFNDKLSSSEEDLDIKLVTLEKNCN 1057 Query: 374 -QSDSLLKLETEYKALQHKINEFKNESATKSEELLNQERELFEKRREIDTLLTQASLEYE 432 L L TE L+ K FK E A + +L N+E EL + + +ID Sbjct: 1058 IAMSRLQSLVTENSDLRSKNENFKKEKAALNNQLKNKESELLKMKEKID----------N 1107 Query: 433 HQRESSQLLKDKQNEVKQHFQNLEYAKKELDKERNLLDQQKKVDSEAIFQLKEKVAQERK 492 H++E + K + + V +H + EL + R L + K ++KE+ + ++ Sbjct: 1108 HKKELATFSKQRDDAVSEHGK----ITAELKETRIQLTEYK----SNYQKIKEEYSNFQR 1159 Query: 493 ELEELYLVKKQKQDQKENELLFFEKQLKQHQADFENELEAKQQELFEAKHALERSFIKLE 552 E K+++ +K N L+ + L + ELEA+ + L + ++ Sbjct: 1160 E-------TKEQEQKKRNSLV---ESLNDSKI---KELEARLSQEISLNQYLNK---RIS 1203 Query: 553 DKEKDLNTKAQQIANEFSQLKTDK----SKSADFELMLQNEYENLQ---QEKQKLFQERT 605 + N + + + +S DK K D +L NL+ +EK+ L Sbjct: 1204 GNSVETNISSTRRSTSYSDDPLDKEDIIKKYYDLQLAFTEITRNLENEIEEKKNLISRLR 1263 Query: 606 YFERNAAVLSNXXXXXXXXXXXXXXTLDQLTKSFEQERLINQ-REHKELVASVEKQ---K 661 + E A + SFE +++ Q ++ K+L+ ++ Sbjct: 1264 FTETRLA-----------------------SSSFEDQKIKAQMKKLKKLIQDMDPSIPLD 1300 Query: 662 EILGKKLQDFSQTSLNASKNLAE-----REMAIKFK-----EKEIEATEKQLLNDVNNAE 711 IL + L + + +K + E R++ I+ + E I A + + Sbjct: 1301 SILNEPLDNCPDKESDINKLMLEVDYLKRQLDIETRAHYDAENAISALHSKFRKIQGESS 1360 Query: 712 VIQADLAQLNQSLNQERSELQNAKQR---IADFHNDSLKKLNEYELSLQKRLQELQTLE- 767 + +D+ +L ++ER + K + + D N + + + S+ K +E++ + Sbjct: 1361 LSSSDIYKLKFEASEERVKSLEDKLKTMPLRDRTNLPVGDIIKNRDSISKYEEEIRYYKL 1420 Query: 768 ANQKQHSYQNQAYFEGELDKLNREKQAFLNLRKKQTMEVDAIKQRLSDKHQALNMQQAEL 827 N K N++ G+L +L + + + + ++D +++ L + + + + Sbjct: 1421 ENYKLQEILNES--NGKLSQLTLDLRQSKSKEALLSEQLDRLQKDLESTERQKELLSSTI 1478 Query: 828 DRKTHELNNAFLNHDADQKSLQDQLATVKETQKLIDLERSALLEKQREFAENVAGFKRHW 887 ++ + N + ++ L++ + +K+ ++ + ++++EK + +N K W Sbjct: 1479 KQQKQQFENCMDDLQGNELRLREHIHALKQAEEDVK-NMASIIEKLK--TQNKQKEKLIW 1535 Query: 888 SNKTSQLQKIYXXXXXXXXXXXXXXXXXXIAFSDLQKDYQVFELQKDQEFRQIEAKQREL 947 + + SD+Q + EL++ Q+ ++I + +L Sbjct: 1536 EREMERND------------------------SDMQLQETLLELKRVQDVKKILSD--DL 1569 Query: 948 DKLAEKNNQV--KLELDNRFQALQNQKQDTVQAQLELEREQHQLNLE-QTAFNQAN---E 1001 L E+ + V + + + L+ + +++A+ L++E L + +T+ N + Sbjct: 1570 AHLKERLSAVEDRSQYTDEINRLKEELNCSLKAETNLKKEFATLKYKLETSTNDSEAKIS 1629 Query: 1002 SLLKQREQLTKKIQAFHYELKKRNQFLALKGKRLFAKEQDQQRKDQEINWRFKQFEKEYT 1061 LLKQ + TK ++ L ++L K L+ K + + + + + Sbjct: 1630 DLLKQLDHYTKVVEM----LNNEKDAISLAEKELYQKYEALNTECESLKGKI-------- 1677 Query: 1062 DFDXXXXXXXXXXXXXXXXXSQSNVELERKREKLATDF---TNLNKVQHNTQINRDQLNS 1118 V L + +++L +D T+ ++ + + Q N Sbjct: 1678 ------------------------VSLTKIKQELESDLNQKTDALQISNAALSSSTQKNK 1713 Query: 1119 QIRQFLLERKNFQRFSNEANAKKAFLIKRLRSFASNLKLQKEALAIQKLEFDKRDEQQKK 1178 +I + + + + E N++ L+K L++ + K DK D++++K Sbjct: 1714 EITEKIKYLEETLQLQMEQNSRNGELVKTLQASCNGYK-------------DKFDDEKQK 1760 Query: 1179 ELQQATLQLEQFKFEKQNFDIEKQRQLVAIKTQCEKLSD--EKKALNQKLVELKNL--SQ 1234 + L E +K N D++ Q +K E+LSD EK A K+ EL+N+ + Sbjct: 1761 NID---LYEENQTLQKLNTDLQLQ-----LKNLHERLSDTTEKNAWLSKIHELENMVSLE 1812 Query: 1235 TYL----ANKNKA-EYSQQQLQQKYTNLLDLKENLERTKDQLDK---KHRSIFARLTKFA 1286 T L KNK+ E + ++LQ K + D+ E + + + ++ K+ + + L K+ Sbjct: 1813 TDLKYEEMKKNKSLERAVEELQTKNSQQTDVIELANKNRSEFEEATLKYEAQISDLEKYI 1872 Query: 1287 NDLRFEKKQLLKAQRIVDDKNRLLKENERNLHFLSNETE 1325 + E K+ ++ DK ++E + + F + E Sbjct: 1873 SQQELEMKKSIRDNSSYRDK---VQEMAQEIEFWKSRYE 1908 Score = 83.2 bits (204), Expect = 7e-18 Identities = 143/855 (16%), Positives = 331/855 (38%), Gaps = 107/855 (12%) Query: 719 QLNQSLNQERSELQNAKQRIADFHNDSLKKLNEYELSLQKRLQELQTLEANQ------KQ 772 + N+ +N+ +++LQ + + + K +NE E + QE + L N+ K Sbjct: 865 KFNEQINKLKNDLQEMESKKKFLEEKNQKTVNELENTQDLLNQEKENLRKNESLLNRVKT 924 Query: 773 HSYQNQAYFE---GELDKLNREKQAFLNLRKKQTMEVDAIKQRLSDKHQALNMQQAELDR 829 S Q F+ E D+++REK ++ ++ +++ + ++ L +L Sbjct: 925 SSETLQKQFDDLVSEKDEISREKLEVAQNLEEAHQKIQGLQETIREREATLE----KLHS 980 Query: 830 KTHELNNAFLNHDADQKSLQDQLATVKETQKLIDLERSALLEKQREFAENVAGFKRHWSN 889 K +EL + + D Q + +KE++ ++ E L + E + F S+ Sbjct: 981 KNNELIKQISDLNCDISKEQSSQSLIKESKLKLENEIKRLKDVINSKEEEIKSFNDKLSS 1040 Query: 890 KTSQLQKIYXXXXXXXXXXXXXXXXXXIAFSDLQKDYQVFELQKDQEFRQIEAKQRELDK 949 L SDL+ + F+ +K Q++ K+ EL K Sbjct: 1041 SEEDLDIKLVTLEKNCNIAMSRLQSLVTENSDLRSKNENFKKEKAALNNQLKNKESELLK 1100 Query: 950 LAEKNNQVKLELDNRFQALQNQKQDTVQAQLELEREQHQLNLEQTAFNQANESLLKQREQ 1009 + EK + K EL Q+ D V ++ E + ++ T + + + ++ Sbjct: 1101 MKEKIDNHKKEL----ATFSKQRDDAVSEHGKITAELKETRIQLTEYKSNYQKIKEEYSN 1156 Query: 1010 LTKKIQAFHYELKKRNQFL-ALKGKRLFAKEQDQQRKDQEINWRFKQFEKEYTDFDXXXX 1068 ++ + E KKRN + +L ++ ++ + R QEI+ +Y + Sbjct: 1157 FQRETK--EQEQKKRNSLVESLNDSKI---KELEARLSQEISLN------QYLNKRISGN 1205 Query: 1069 XXXXXXXXXXXXXSQSNVELERKREKLATDFTNLNKVQHNTQINRDQLNSQIRQFLLERK 1128 S S+ L+++ ++ K ++ Q+ ++ + + E+K Sbjct: 1206 SVETNISSTRRSTSYSDDPLDKE---------DIIKKYYDLQLAFTEITRNLENEIEEKK 1256 Query: 1129 NF---QRFSNEANAKKAFLIKRLRSFASNLKL----QKEALAIQKLEFDKRDEQQKKELQ 1181 N RF+ A +F +++++ LK ++ + + + D KE Sbjct: 1257 NLISRLRFTETRLASSSFEDQKIKAQMKKLKKLIQDMDPSIPLDSILNEPLDNCPDKESD 1316 Query: 1182 QATLQLEQFKFEKQNFDIEK------QRQLVAIKTQCEKLSDEKKALNQKLVELKNLSQT 1235 L LE + K+ DIE + + A+ ++ K+ E + + +LK Sbjct: 1317 INKLMLE-VDYLKRQLDIETRAHYDAENAISALHSKFRKIQGESSLSSSDIYKLK----- 1370 Query: 1236 YLANKNKAEYSQQQLQQKYTNLLDLKENLERTKDQLDKKHRSIFARLTKFANDLRFEKKQ 1295 + A++ + + + +L+ + L++ + K SI +K+ ++R+ K + Sbjct: 1371 FEASEERVKSLEDKLKT-----MPLRDRTNLPVGDIIKNRDSI----SKYEEEIRYYKLE 1421 Query: 1296 LLKAQRIVDDKNRLLKENERNLHFLSNETERKRAVLEDQISYFEKQRKQATDAILASHKE 1355 K Q I+++ N L + +L +++ K A+L +Q+ +K + Sbjct: 1422 NYKLQEILNESNGKLSQLTLDLR----QSKSKEALLSEQLDRLQKDLESTERQKELLSST 1477 Query: 1356 VKKKEGELQKLLVELETRKTKLNNDFAKFSRQREEFEN----------QRXXXXXXXXXX 1405 +K+++ + + + +L+ + +L + E+ +N Q Sbjct: 1478 IKQQKQQFENCMDDLQGNELRLREHIHALKQAEEDVKNMASIIEKLKTQNKQKEKLIWER 1537 Query: 1406 XXXXNSNNFKT-------KAIQEIENSYKRGM-----------------EELNFQKKEFD 1441 N ++ + K +Q+++ + +E+N K+E + Sbjct: 1538 EMERNDSDMQLQETLLELKRVQDVKKILSDDLAHLKERLSAVEDRSQYTDEINRLKEELN 1597 Query: 1442 ---KNKSRLYEYFRKMRDEIERKESQVKLVLKETQRKANLLEAQANKLNIEKNTIDFKEK 1498 K ++ L + F ++ ++E + + + + ++ + LN EK+ I EK Sbjct: 1598 CSLKAETNLKKEFATLKYKLETSTNDSEAKISDLLKQLDHYTKVVEMLNNEKDAISLAEK 1657 Query: 1499 ELKAFKDKVDQDIDS 1513 EL + ++ + +S Sbjct: 1658 ELYQKYEALNTECES 1672 Score = 55.1 bits (131), Expect = 2e-09 Identities = 115/591 (19%), Positives = 230/591 (38%), Gaps = 110/591 (18%) Query: 1171 KRDEQQKKELQQATLQLEQFKFEKQNFDIEKQRQLVAIKTQCEKLSDEKKALNQKLVELK 1230 K +Q E +LQL+ ++ N + + ++A EK D K LN +++L Sbjct: 748 KASTKQNCEFLLTSLQLDTKVYKIGNTKLFFKAGVLA---DLEKQKDVK--LNNIMIKLT 802 Query: 1231 NLSQTYLANKNKAEYSQQQLQQKYTNLLDLKENLERTKDQLDKKHR--SIFARLTKF--- 1285 + Y K + Y Q+L K T ++ N R ++L K+ ++F R+ Sbjct: 803 ATIRGYTVRK-EITYHLQKL--KKTRVIG---NTFRLYNRLVKEDPWFNLFIRIKPLLTS 856 Query: 1286 ANDLRFEKKQLLKAQRIVDDKNRLLKENERNLHFLSNETERKRAVLEDQISYF--EKQRK 1343 +ND+ KK + ++ +D L+E E FL + ++ LE+ EK+ Sbjct: 857 SNDMTRTKKFNEQINKLKND----LQEMESKKKFLEEKNQKTVNELENTQDLLNQEKENL 912 Query: 1344 QATDAILASHKEVKKKEGELQKLLVELETRKTKLNNDFAKFSRQREEFENQRXXXXXXXX 1403 + +++L VK LQK +L + K +++ + + ++ EE Sbjct: 913 RKNESLL---NRVKTSSETLQKQFDDLVSEKDEISREKLEVAQNLEEAHQ---------- 959 Query: 1404 XXXXXXNSNNFKTKAIQEIENSYKRGMEELNFQKKEFDKNKSRLYEYFRKMRDEIERKES 1463 K + +QE + +E+L+ + E K S L +I +++S Sbjct: 960 -----------KIQGLQETIREREATLEKLHSKNNELIKQISDL-------NCDISKEQS 1001 Query: 1464 QVKLVLKETQRKANLLEAQANKLNIEKNTIDFKEKELKAFKDKVDQDIDSTXXXXXXXXX 1523 L+ KE++ K LE + +L K+ I+ KE+E+K+F DK+ + Sbjct: 1002 SQSLI-KESKLK---LENEIKRL---KDVINSKEEEIKSFNDKLSSSEEDLDIKLVTLEK 1054 Query: 1524 XXXXXXXXXXSLIERERAINSKDSLLNKKIETIKRQLHDKEMRVLRLVDRMKLAEQKYQT 1583 SL+ + SK+ K+ + QL +KE +L++ +++ Sbjct: 1055 NCNIAMSRLQSLVTENSDLRSKNENFKKEKAALNNQLKNKESELLKMKEKI--------- 1105 Query: 1584 EINRLRTQTFDSEKQDIKNFFPPLFKINGNDMAFPYLYPWLYPQQKQDDNTLQIRXXXXX 1643 D+ K+++ F KQ D+ + Sbjct: 1106 ----------DNHKKELATF------------------------SKQRDDAV----SEHG 1127 Query: 1644 XXXXXXXXXXXXXXXXXXXXXXXXKKLDQIQLESQLNNKQSEFSKVESMMEKLLEKTESR 1703 ++ Q E++ ++ S VES+ + +++ E+R Sbjct: 1128 KITAELKETRIQLTEYKSNYQKIKEEYSNFQRETKEQEQKKRNSLVESLNDSKIKELEAR 1187 Query: 1704 LNDFDQKINYLTKKVNQHNT-YQPSSYQPTPSYQDS--DKQQLLFRIQELE 1751 L+ YL K+++ ++ SS + + SY D DK+ ++ + +L+ Sbjct: 1188 LSQEISLNQYLNKRISGNSVETNISSTRRSTSYSDDPLDKEDIIKKYYDLQ 1238 Score = 52.4 bits (124), Expect = 1e-08 Identities = 57/259 (22%), Positives = 122/259 (47%), Gaps = 14/259 (5%) Query: 20 DGYLQSEYEKNRSKTDVDKIENQLLKEIKSLEDELKNLKG-LKNQAEDNPELDKKINHLE 78 D Y + N K + E +L ++ ++L E ++LKG + + + EL+ +N + Sbjct: 1636 DHYTKVVEMLNNEKDAISLAEKELYQKYEALNTECESLKGKIVSLTKIKQELESDLNQ-K 1694 Query: 79 VDLNRLVNEYKNFQFQKN-HMVDKVSELDNLTRFYKNELTRLQQENADFLNSKYANLANF 137 D ++ N + QKN + +K+ L+ + + +R N + + + A+ + Sbjct: 1695 TDALQISNAALSSSTQKNKEITEKIKYLEETLQLQMEQNSR----NGELVKTLQASCNGY 1750 Query: 138 QANYHNKLNDFHRLIENQNQTINRLNQKINGNQNLIDNNVALLQNPNITVEKKNYLLNVI 197 + + ++ L E +NQT+ +LN + + ++ N + K + L N++ Sbjct: 1751 KDKFDDEKQKNIDLYE-ENQTLQKLNTDLQLQLKNLHERLSDTTEKNAWLSKIHELENMV 1809 Query: 198 DQLYNELDQLENQKRLLSIEYENTYRELVSADNELQNVYENIDQNQIQFKHQYQTYRDEL 257 L +L + E K+ S+ E EL + +++ +V E ++N+ +F+ Y ++ Sbjct: 1810 -SLETDL-KYEEMKKNKSL--ERAVEELQTKNSQQTDVIELANKNRSEFEEATLKYEAQI 1865 Query: 258 SQLERKIQLTKQELVDKES 276 S LE+ I ++QEL K+S Sbjct: 1866 SDLEKYI--SQQELEMKKS 1882 >MPNE-M12-01-000474 gi|13508213|ref|NP_110162.1| coiled coil protein, putative structural protein involved in cytosceleton [Mycoplasma pneumoniae] Length = 1033 Score = 108 bits (270), Expect = 1e-25 Identities = 175/730 (23%), Positives = 329/730 (45%), Gaps = 84/730 (11%) Query: 186 TVEKKNYLLNVIDQ--LYNELDQLENQKRLLSIEYENTYRELVSADNELQNVYENIDQNQ 243 TV+K N L N + Q + + +Q +L +E+ + +LQ + I+ Q Sbjct: 270 TVDKAN-LTNALSQTVVIKPAEDSAHQSAVLD-------KEIATKQAQLQQLQAQIELRQ 321 Query: 244 IQFKHQYQTYR--DELSQLERKIQLTKQELVDKE-SALRVKIDDADFYINARLAELDD-V 299 Q + TY +E L + + Q V E + L+ ++D A + A +L++ + Sbjct: 322 AQLETPPVTYMGVEEYKLLPVQDVVPVQPTVSFEMTLLQEQLDKALKHNAALQIQLEEQL 381 Query: 300 AKQLSF-QDGITKQNAQHVEDKLVALNKEKDRLNTQKEAFFNLRQSALIDINKLQQENEL 358 AK L + Q + ++ + ++++ L +E LN ++ F + ++L+ + +L++EN Sbjct: 382 AKPLQYDQSPVLQERIELLQNQNTNLTQE---LNELQQKLFKSQNNSLL-LARLEEENRT 437 Query: 359 FAKHLEHQQNEFEQKQ---SDSLLKLETEYKALQHKINEFKNESATKSEELLNQERELFE 415 +HL++ E Q L +L+ + +L +I ++K +S E+L + Sbjct: 438 LKQHLQNNLPEANQLNFVLEKQLEQLQQDKHSLTLQIEQYKFDSKKHQEQLAL----IPS 493 Query: 416 KRREIDTLLTQA-SLEYEHQRESSQLLKDKQNEVKQHFQNLEYAK--KELDKERNLLDQQ 472 R EI++L T+ SL+ +QR S L++ + N +K + L K E K RNLL Q Sbjct: 494 LRSEINSLETEVISLKQTNQRLS--LIERENNFLKTEIKQLRETKLNDENTKYRNLLKQY 551 Query: 473 KKVDSEAIFQLKEKVAQERKELEELYLVKKQKQDQKENELLFFEKQLKQHQA-DFENELE 531 + + +++ +LKE + + L + ++ Q Q+ NE L K+L Q +A +FE L Sbjct: 552 ELMRADSDAKLKE--LEHEQHLAHQHHQEQLAQLQRHNEALV--KELDQVKATNFELGLA 607 Query: 532 AK----QQELFEAKHA-LERSFIKLEDKEKDLNTKAQQIANEFSQLK-TDKSKSADFELM 585 A+ Q+ + E K++ L S E+ + L ++ N+ + L+ T K K+A Sbjct: 608 AQGFEQQKVVLEQKNSSLLASLQAAEENVQALGITNSELQNQLNVLEFTHKEKTAFDSKT 667 Query: 586 LQNEYENLQQEKQKLFQERTYFERNAAVLSNXXXXXXXXXXXXXXTLDQLTKSFEQERLI 645 L + L+Q + L + + A L+ L +S E + Sbjct: 668 LTLTKQQLEQTQFDL----SLTQEQLATFKQQNQSLTDKLMASETQLNHLQQSDENLTQL 723 Query: 646 NQREHKELVASVEKQKEILGKKLQDFSQTSLNASKNLAEREMAIKFKEKEIEATEK--QL 703 Q +H+ L S K ++ Q F Q + A +++A+ FK+ E T+K + Sbjct: 724 -QTQHELLQESYNKLQDEANHTQQQFHQAQNEL--DAAHQQLAL-FKQNNEELTDKCSNI 779 Query: 704 LNDVNNAEVIQADLAQLNQSLNQERSELQNAKQRIADFHNDSLKKLNEYEL------SLQ 757 N++++ ++ + LN N + + K+++ H++ + E+EL ++ Sbjct: 780 QNELHDLNRVKTNWENLNTEHNLLQDKYAQQKEQMQHEHSNLAQIQAEHELLQESYNKVK 839 Query: 758 KRLQELQTLEANQKQHSYQN--QAY--FEGELDKLNREKQAF--LNLRKKQTMEVDAIKQ 811 L E+Q N+ YQ+ AY + +KL +E Q +NL K+Q + Q Sbjct: 840 AELNEIQITNLNEANAQYQDLLSAYELLQSNHNKLKQELQVLNQVNLEKQQ------LAQ 893 Query: 812 RLSDKHQALNMQQAELDRKTHELNNAFLNHDADQKSLQDQLATVKETQKLIDLERSALLE 871 +L + HQ+L+ AEL + NN LQ AT + +L++ LE Sbjct: 894 KLHNTHQSLSQTHAELTQLQAAYNN-----------LQ---ATPPVSDELLEQFNQVQLE 939 Query: 872 KQREFAENVA 881 KQR +N+A Sbjct: 940 KQRLLQQNLA 949 Score = 77.8 bits (190), Expect = 3e-16 Identities = 157/802 (19%), Positives = 314/802 (39%), Gaps = 127/802 (15%) Query: 649 EHKELVASVEK-------QKEILGKKLQDFSQTSLNASKNLAEREMAIKFKEKEIEATEK 701 EH + +V+K + ++ K +D + S K +A ++ ++ + +IE + Sbjct: 263 EHSFSITTVDKANLTNALSQTVVIKPAEDSAHQSAVLDKEIATKQAQLQQLQAQIELRQA 322 Query: 702 QLLND------VNNAEVIQA-DLAQLNQSLNQERSELQNAKQRIADFHNDSLKKLNEYEL 754 QL V +++ D+ + +++ E + LQ + HN +L+ E +L Sbjct: 323 QLETPPVTYMGVEEYKLLPVQDVVPVQPTVSFEMTLLQEQLDKALK-HNAALQIQLEEQL 381 Query: 755 S----------LQKRLQELQTLEAN---------QKQHSYQNQAYFEGELDKLNREKQAF 795 + LQ+R++ LQ N QK QN + L++ NR + Sbjct: 382 AKPLQYDQSPVLQERIELLQNQNTNLTQELNELQQKLFKSQNNSLLLARLEEENRTLKQH 441 Query: 796 LNLRKKQTMEVDAI-----KQRLSDKHQ-ALNMQQAELDRKTHELNNAFL-NHDADQKSL 848 L + +++ + +Q DKH L ++Q + D K H+ A + + ++ SL Sbjct: 442 LQNNLPEANQLNFVLEKQLEQLQQDKHSLTLQIEQYKFDSKKHQEQLALIPSLRSEINSL 501 Query: 849 QDQLATVKETQKLIDLERSALLEKQREFAENVAGFKRHWSNKTSQLQKIYXXXXXXXXXX 908 + ++ ++K+T +R +L+E++ F + + QL++ Sbjct: 502 ETEVISLKQTN-----QRLSLIERENNFLKT----------EIKQLRE------------ 534 Query: 909 XXXXXXXXIAFSDLQKDYQVFELQKDQEFRQIEAKQRELDKLAEKNNQVKL-ELDNRFQA 967 + +L K Y++ D + +++E +Q LA +++Q +L +L +A Sbjct: 535 -TKLNDENTKYRNLLKQYELMRADSDAKLKELEHEQH----LAHQHHQEQLAQLQRHNEA 589 Query: 968 LQNQKQDTVQAQLELEREQHQLNLEQTAFNQANESLLKQREQLTKKIQAF---HYELKKR 1024 L + EL ++ Q N SLL + + +QA + EL+ + Sbjct: 590 LVKELDQVKATNFELGLAAQGFEQQKVVLEQKNSSLLASLQAAEENVQALGITNSELQNQ 649 Query: 1025 NQFLALKGKRLFA---------KEQDQQRK-----DQEINWRFKQFEKEYTDFDXXXXXX 1070 L K A K+Q +Q + QE FKQ + TD Sbjct: 650 LNVLEFTHKEKTAFDSKTLTLTKQQLEQTQFDLSLTQEQLATFKQQNQSLTD----KLMA 705 Query: 1071 XXXXXXXXXXXSQSNVELERKREKLATDFTNLNKVQHNTQIN----RDQLNSQIRQFLLE 1126 ++ +L+ + E L + L ++TQ +++L++ +Q L Sbjct: 706 SETQLNHLQQSDENLTQLQTQHELLQESYNKLQDEANHTQQQFHQAQNELDAAHQQLALF 765 Query: 1127 RKNFQRFSNEANAKKAFLIKRLRSFASNLKLQKEALAIQKLEFDKRDEQQKKELQQATLQ 1186 ++N NE K I+ + +K E L + + QQK+++Q Sbjct: 766 KQN-----NEELTDKCSNIQNELHDLNRVKTNWENLNTEHNLLQDKYAQQKEQMQHEHSN 820 Query: 1187 LEQFKFEKQNFDIEKQRQLVAIKTQCEKLS----DEKKALNQKLVELKNLSQTYLANKNK 1242 L Q + E + Q +K + ++ +E A Q L+ L Q +N NK Sbjct: 821 LAQIQAEHELL----QESYNKVKAELNEIQITNLNEANAQYQDLLSAYELLQ---SNHNK 873 Query: 1243 AEYSQQQLQQKYTNLLDLKENLERTKDQLDKKHRSIFARLTKFANDLR----FEKKQLLK 1298 + Q L Q L + L T L + H + +L N+L+ + L + Sbjct: 874 LKQELQVLNQVNLEKQQLAQKLHNTHQSLSQTHAEL-TQLQAAYNNLQATPPVSDELLEQ 932 Query: 1299 AQRIVDDKNRLLKENERNLHFLSNETERKRAVLEDQISYFEKQRKQATDAILASHKEV-- 1356 ++ +K RLL++N +H L E + Q + ++ + ++ KE+ Sbjct: 933 FNQVQLEKQRLLQQNLALVHELQYFNE----LNSSQTHEIKTKQDETVKEVIIVEKEIPV 988 Query: 1357 -KKKEGELQKLLVELETRKTKL 1377 +K+ L+K + +E ++ L Sbjct: 989 PPEKKPRLKKRDIVIENKEDAL 1010 Score = 73.2 bits (178), Expect = 7e-15 Identities = 118/551 (21%), Positives = 228/551 (41%), Gaps = 83/551 (15%) Query: 23 LQSEYEKNRSKTDVDKIE--NQLLKEIKSLEDELKNLKGLKNQAE----DNPELDKKINH 76 LQ E K SK +++ L EI SLE E+ +LK + +N L +I Sbjct: 472 LQIEQYKFDSKKHQEQLALIPSLRSEINSLETEVISLKQTNQRLSLIERENNFLKTEIKQ 531 Query: 77 L-EVDLNRLVNEYKN----FQFQKNHMVDKVSELDN----LTRFYKNELTRLQQENADFL 127 L E LN +Y+N ++ + K+ EL++ + ++ +L +LQ+ N + Sbjct: 532 LRETKLNDENTKYRNLLKQYELMRADSDAKLKELEHEQHLAHQHHQEQLAQLQRHNEALV 591 Query: 128 NS-KYANLANFQANYHNKLNDFHRLIENQNQTINRLNQKINGNQNLIDNNVALLQNPNIT 186 NF+ L + E Q + + N + + + NV L N Sbjct: 592 KELDQVKATNFE------LGLAAQGFEQQKVVLEQKNSSLLASLQAAEENVQALGITNSE 645 Query: 187 VEKKNYLLNVIDQLYNELDQLENQKRLLS--------IEYENTYRELVSADNELQNVYEN 238 ++ + LNV++ + E +++ L+ + T +L + + Q++ + Sbjct: 646 LQNQ---LNVLEFTHKEKTAFDSKTLTLTKQQLEQTQFDLSLTQEQLATFKQQNQSLTDK 702 Query: 239 IDQNQIQFKHQYQTYRDELSQLERKIQLTKQELVDKESALRVKIDDADFYINARLAELDD 298 + ++ Q H Q+ + L+QL+ + +L L + + L+ + + + ELD Sbjct: 703 LMASETQLNHLQQS-DENLTQLQTQHEL----LQESYNKLQDEANHTQQQFHQAQNELDA 757 Query: 299 VAKQLSFQDGITKQNAQHVEDKLVALNKEKDRLNTQKEAFFNLRQSALIDINKLQQENEL 358 +QL+ + KQN + + DK + E LN K + NL + N L Sbjct: 758 AHQQLA----LFKQNNEELTDKCSNIQNELHDLNRVKTNWENLNT----------EHNLL 803 Query: 359 FAKHLEHQQNEFEQKQSDSLLKLETEYKALQHKINEFKNESATKSEELLNQERELFEKRR 418 K+ QQ E Q + +L +++ E++ LQ N+ K E LN+ + Sbjct: 804 QDKYA--QQKEQMQHEHSNLAQIQAEHELLQESYNKVKAE--------LNEIQI------ 847 Query: 419 EIDTLLTQASLEYEHQRESSQLLKDKQNEVKQHFQNLEYAKKELDKERNLLDQQKKVDSE 478 T L +A+ +Y+ + +LL+ N++KQ Q L +++ E+ L Q+ + Sbjct: 848 ---TNLNEANAQYQDLLSAYELLQSNHNKLKQELQVLN----QVNLEKQQLAQKLHNTHQ 900 Query: 479 AIFQLKEKVAQERKELEELY--------LVKKQKQDQKENELLFFEKQLKQHQADFENEL 530 ++ Q ++ Q + L L+++ Q Q E + L + H+ + NEL Sbjct: 901 SLSQTHAELTQLQAAYNNLQATPPVSDELLEQFNQVQLEKQRLLQQNLALVHELQYFNEL 960 Query: 531 EAKQQELFEAK 541 + Q + K Sbjct: 961 NSSQTHEIKTK 971 Score = 71.2 bits (173), Expect = 3e-14 Identities = 126/592 (21%), Positives = 237/592 (40%), Gaps = 109/592 (18%) Query: 28 EKNRSKTDVDKIENQLLKEIKSLEDELKNLKGLKNQAEDN----PELDKKINHLEVDLNR 83 E N+ ++K QL ++ SL +++ K + ++ P L +IN LE ++ Sbjct: 448 EANQLNFVLEKQLEQLQQDKHSLTLQIEQYKFDSKKHQEQLALIPSLRSEINSLETEVIS 507 Query: 84 LVNEYKNFQFQKNHMVDKVSELDNLTRFYKNELTRLQQENADFLNSKYANLAN----FQA 139 L Q N + + +N F K E+ +L++ + N+KY NL +A Sbjct: 508 LK--------QTNQRLSLIERENN---FLKTEIKQLRETKLNDENTKYRNLLKQYELMRA 556 Query: 140 NYHNKLNDFHRLIENQNQTINRLNQKINGNQNLIDNNVALLQNPNITVEKKNYLLNVIDQ 199 + KL + +E++ ++ +Q+ L +N AL++ + V+ N+ L + Q Sbjct: 557 DSDAKLKE----LEHEQHLAHQHHQE--QLAQLQRHNEALVKELD-QVKATNFELGLAAQ 609 Query: 200 LYNE----LDQLENQKRLLSIE-YENTYRELVSADNELQNVYENIDQNQIQFKHQYQTYR 254 + + L+Q +N L S++ E + L ++ELQN N ++F H+ +T Sbjct: 610 GFEQQKVVLEQ-KNSSLLASLQAAEENVQALGITNSELQN-----QLNVLEFTHKEKTAF 663 Query: 255 DELSQLERKIQLTKQELVDKESALRVKIDDADFYINARLAELDDVAKQLSFQDGITKQNA 314 D + + LTKQ+L + L + + Q KQ Sbjct: 664 D-----SKTLTLTKQQLEQTQFDLSLTQE----------------------QLATFKQQN 696 Query: 315 QHVEDKLVALNKEKDRLNTQKEAFFNLR-QSALI--DINKLQQENELFAKHLEHQQNEFE 371 Q + DKL+A + + L E L+ Q L+ NKLQ E H Q +F Sbjct: 697 QSLTDKLMASETQLNHLQQSDENLTQLQTQHELLQESYNKLQDE-------ANHTQQQFH 749 Query: 372 QKQSDSLLKLETEYKALQHKINEFKNESATKSEELLNQERELFEKRREIDTLLTQASLEY 431 Q Q+ E A ++ FK + +++ N + EL + L + + Sbjct: 750 QAQN--------ELDAAHQQLALFKQNNEELTDKCSNIQNELHD--------LNRVKTNW 793 Query: 432 EHQRESSQLLKDKQNEVKQHFQNLEYAKKELDKERNLLDQQKKVDSEAIFQLKEKVAQER 491 E+ LL+DK + K+ Q+ ++ E L L+E + + Sbjct: 794 ENLNTEHNLLQDKYAQQKEQMQHEHSNLAQIQAEHEL--------------LQESYNKVK 839 Query: 492 KELEELYLVKKQKQDQKENELLFFEKQLKQHQADFENELEAKQQELFEAKHALERSFIKL 551 EL E+ + + + + +LL + L+ + + EL+ Q E K L + Sbjct: 840 AELNEIQITNLNEANAQYQDLLSAYELLQSNHNKLKQELQVLNQVNLE-KQQLAQKLHNT 898 Query: 552 EDKEKDLNTKAQQIANEFSQLKTDKSKSADFELMLQNEYENLQQEKQKLFQE 603 + + Q+ ++ L+ S + L ++ +Q EKQ+L Q+ Sbjct: 899 HQSLSQTHAELTQLQAAYNNLQATPPVSDE----LLEQFNQVQLEKQRLLQQ 946 Score = 53.5 bits (127), Expect = 6e-09 Identities = 98/477 (20%), Positives = 193/477 (40%), Gaps = 112/477 (23%) Query: 1105 VQHNTQINRDQLNSQIRQFL--LERKNFQRFSNEANAKKAFLIKRLRSFASNLK--LQKE 1160 +Q ++ ++Q N+ + Q L L++K F+ +N + L+ RL LK LQ Sbjct: 393 LQERIELLQNQ-NTNLTQELNELQQKLFKSQNN------SLLLARLEEENRTLKQHLQNN 445 Query: 1161 ALAIQKLEF--DKRDEQQKKELQQATLQLEQFKFEKQNFDIEKQRQLVAIKTQCEKLSDE 1218 +L F +K+ EQ +++ TLQ+EQ+KF+ + + Q QL I + L E Sbjct: 446 LPEANQLNFVLEKQLEQLQQDKHSLTLQIEQYKFDSK----KHQEQLALIPS----LRSE 497 Query: 1219 KKALNQKLVELKNLSQTYLANKNKAEYSQQQLQQ-----------KYTNLL--------- 1258 +L +++ LK +Q + + + + +++Q KY NLL Sbjct: 498 INSLETEVISLKQTNQRLSLIERENNFLKTEIKQLRETKLNDENTKYRNLLKQYELMRAD 557 Query: 1259 -DLK-ENLERTKDQLDKKHRSIFARLTKFANDLRFEKKQL--------LKAQR------I 1302 D K + LE + + H+ A+L + L E Q+ L AQ + Sbjct: 558 SDAKLKELEHEQHLAHQHHQEQLAQLQRHNEALVKELDQVKATNFELGLAAQGFEQQKVV 617 Query: 1303 VDDKNRLL-------KENERNLHFLSNETERKRAVLE----------------------- 1332 ++ KN L +EN + L ++E + + VLE Sbjct: 618 LEQKNSSLLASLQAAEENVQALGITNSELQNQLNVLEFTHKEKTAFDSKTLTLTKQQLEQ 677 Query: 1333 ---------DQISYFEKQRKQATDAILASHKEVKKKEGELQKLLVELETRKTKLNNDFAK 1383 +Q++ F++Q + TD ++AS ++ + + + L +L+T+ L + K Sbjct: 678 TQFDLSLTQEQLATFKQQNQSLTDKLMASETQLNHLQ-QSDENLTQLQTQHELLQESYNK 736 Query: 1384 F----SRQREEFENQRXXXXXXXXXXXXXXNSNNFKTKAIQEIENSYKRGMEELNFQKKE 1439 + +++F + +N T I+N + +LN K Sbjct: 737 LQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEELTDKCSNIQNE----LHDLNRVKTN 792 Query: 1440 FDK---NKSRLYEYFRKMRDEIERKESQVKLVLKETQRKANLLEAQANKLNIEKNTI 1493 ++ + L + + + +++++ + S L + Q + LL+ NK+ E N I Sbjct: 793 WENLNTEHNLLQDKYAQQKEQMQHEHSN----LAQIQAEHELLQESYNKVKAELNEI 845 Score = 51.6 bits (122), Expect = 2e-08 Identities = 108/462 (23%), Positives = 191/462 (41%), Gaps = 64/462 (13%) Query: 50 LEDELKNLKGLKNQAEDNPELDKKINHLEVDLNRLVNEYKNFQFQKNHMVDKVSELDNLT 109 LE + +L AE+N + L + + L N+ +F H + LT Sbjct: 618 LEQKNSSLLASLQAAEEN------VQALGITNSELQNQLNVLEF--THKEKTAFDSKTLT 669 Query: 110 RFYKNELTRLQQENADF-LNSKYANLANFQANYHNKLNDFHRLIENQNQTINRLNQKING 168 LT+ Q E F L+ LA F+ + L D +L+ ++ Q +N L Q Sbjct: 670 ------LTKQQLEQTQFDLSLTQEQLATFKQQ-NQSLTD--KLMASETQ-LNHLQQSDEN 719 Query: 169 NQNLIDNNVALLQNPNITVEKKNYLLNVIDQLYNELDQLENQKRLLSIEYENTYRELVSA 228 L + L ++ N ++ N+ Q NELD Q L ++ EL Sbjct: 720 LTQLQTQHELLQESYNKLQDEANHTQQQFHQAQNELDAAHQQLAL----FKQNNEELTDK 775 Query: 229 DNELQNVYENIDQNQIQFKHQYQTYRDELSQLERKIQLTKQELVDKESALRVKIDDADFY 288 + +QN E D N++ K ++ E + L+ K K+++ + S Sbjct: 776 CSNIQN--ELHDLNRV--KTNWENLNTEHNLLQDKYAQQKEQMQHEHS------------ 819 Query: 289 INARLAELDDVAKQLSFQDGITKQNAQHVEDKLVALNKEKDRLNTQKEAFFNLRQSALID 348 LA++ A+ Q+ K A+ E ++ LN+ N Q + + + + Sbjct: 820 ---NLAQIQ--AEHELLQESYNKVKAELNEIQITNLNE----ANAQYQDLLSAYELLQSN 870 Query: 349 INKLQQENELFAK-HLEHQQNEFEQKQSDSLLKLETEYKALQHKINEFKNESATK--SEE 405 NKL+QE ++ + +LE QQ QK ++ L + L + N AT S+E Sbjct: 871 HNKLKQELQVLNQVNLEKQQ--LAQKLHNTHQSLSQTHAELTQLQAAYNNLQATPPVSDE 928 Query: 406 LLNQEREL-FEKRREI-DTLLTQASLEYEHQRESSQL--LKDKQNEVKQHFQNLEY---- 457 LL Q ++ EK+R + L L+Y ++ SSQ +K KQ+E + +E Sbjct: 929 LLEQFNQVQLEKQRLLQQNLALVHELQYFNELNSSQTHEIKTKQDETVKEVIIVEKEIPV 988 Query: 458 --AKKELDKERNLLDQQKKVDSEAIFQLKEKVAQERKELEEL 497 KK K+R+++ + K+ D+ KE++ + L ++ Sbjct: 989 PPEKKPRLKKRDIVIENKE-DALGKLSKKERIQAYAERLAKI 1029 Score = 50.8 bits (120), Expect = 4e-08 Identities = 83/444 (18%), Positives = 168/444 (37%), Gaps = 59/444 (13%) Query: 1185 LQLEQFKFEKQNFDIEK--QRQLVAIKTQCEKLSDEKKALNQKLVELKNLSQTYLANKNK 1242 +QLE+ + +D Q ++ ++ Q L+ E L QKL + +N S + + Sbjct: 375 IQLEEQLAKPLQYDQSPVLQERIELLQNQNTNLTQELNELQQKLFKSQNNSLLLARLEEE 434 Query: 1243 AEYSQQQLQQKYTNLLDLKENLERTKDQLDKKHRSIFARLTKFANDLRFEKKQLLKAQRI 1302 +Q LQ L LE+ +QL + S+ ++ ++ D + ++QL + Sbjct: 435 NRTLKQHLQNNLPEANQLNFVLEKQLEQLQQDKHSLTLQIEQYKFDSKKHQEQLALIPSL 494 Query: 1303 VDDKNRLLKENERNLHFLSNETERKRAVLEDQISYFEKQRKQATDAILASHKEVKKKEGE 1362 + N L E +T ++ +++E + ++ + + KQ Sbjct: 495 RSEINSLETE-----VISLKQTNQRLSLIERENNFLKTEIKQ------------------ 531 Query: 1363 LQKLLVELETRKTKLNNDFAKFSRQREEFENQRXXXXXXXXXXXXXXNSNNFKTKAIQEI 1422 R+TKLN++ K+ +++E R + + + QE Sbjct: 532 ---------LRETKLNDENTKYRNLLKQYELMR---ADSDAKLKELEHEQHLAHQHHQEQ 579 Query: 1423 ENSYKRGMEELNFQKKEFDKNKSRLYEY------FRKMRDEIERKESQVKLVLKETQRKA 1476 +R E L KE D+ K+ +E F + + +E+K S + L+ + Sbjct: 580 LAQLQRHNEAL---VKELDQVKATNFELGLAAQGFEQQKVVLEQKNSSLLASLQAAEENV 636 Query: 1477 NLLEAQANKLNIEKNTIDFKEKELKAFKDK----VDQDIDSTXXXXXXXXXXXXXXXXXX 1532 L ++L + N ++F KE AF K Q ++ T Sbjct: 637 QALGITNSELQNQLNVLEFTHKEKTAFDSKTLTLTKQQLEQTQFDLSLTQEQLATFKQQN 696 Query: 1533 XSLIERERAINSKDSLLNKKIETIKRQLHDKEMRVLRLVDRMKLAEQKYQTEINRLRTQT 1592 SL ++ A ++ + L + E + + E+ ++ + K Q E N + Q Sbjct: 697 QSLTDKLMASETQLNHLQQSDENLTQLQTQHEL--------LQESYNKLQDEANHTQQQF 748 Query: 1593 FDSEKQ-DIKNFFPPLFKINGNDM 1615 ++ + D + LFK N ++ Sbjct: 749 HQAQNELDAAHQQLALFKQNNEEL 772 Score = 44.7 bits (104), Expect = 3e-06 Identities = 68/357 (19%), Positives = 151/357 (42%), Gaps = 54/357 (15%) Query: 25 SEYEKNRSKTDVDKIENQLLKEIKSLEDELKNLKGLKNQAEDNPELDKKINHLEVDLNRL 84 ++ + +++ D+ + QL + + L + Q + D+ + L+ L Sbjct: 671 TKQQLEQTQFDLSLTQEQLATFKQQNQSLTDKLMASETQLNHLQQSDENLTQLQTQHELL 730 Query: 85 VNEYKNFQFQKNHMVDKVSELDNLTRFYKNELTRLQQENADFLNSKYANLANFQANYHNK 144 Y Q + NH + + N +L +Q N + L + +N N+ Sbjct: 731 QESYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEE--------LTDKCSNIQNE 782 Query: 145 LNDFHRLIENQNQTINRLNQKINGNQNLIDNNVALLQNPNITVEKKNYLLNVIDQLYNEL 204 L+D +R+ N + +N NL+ + A ++K + ++ L Sbjct: 783 LHDLNRVKTNW--------ENLNTEHNLLQDKYA---------QQKEQM----QHEHSNL 821 Query: 205 DQLENQKRLLSIEYENTYRELVSADNELQNVYENIDQNQIQFK---HQYQTYRDELSQLE 261 Q++ + LL Y EL NE+Q N+++ Q++ Y+ + ++L+ Sbjct: 822 AQIQAEHELLQESYNKVKAEL----NEIQ--ITNLNEANAQYQDLLSAYELLQSNHNKLK 875 Query: 262 RKIQLTKQELVDKESALRVKIDDADFYINARLAELDDVAKQLSFQDGITKQNAQHVEDKL 321 +++Q+ Q ++K+ L K+ + ++ AEL + Q ++ + Q V D+L Sbjct: 876 QELQVLNQVNLEKQQ-LAQKLHNTHQSLSQTHAELTQL--QAAYNN---LQATPPVSDEL 929 Query: 322 VALNKEKDRLNTQKEAFFNLRQSALIDINKLQQENELFAKHLEHQQNEFEQKQSDSL 378 + ++ +++ +K+ L Q L +++LQ NEL + Q +E + KQ +++ Sbjct: 930 L---EQFNQVQLEKQ---RLLQQNLALVHELQYFNELNSS----QTHEIKTKQDETV 976 >MGEN-G37-01-000335 MG328 conserved hypothetical protein Length = 756 Score = 103 bits (257), Expect = 5e-24 Identities = 154/679 (22%), Positives = 294/679 (43%), Gaps = 130/679 (19%) Query: 5 DKKPSLQP--IYDIGFDDGYLQSEYEKNRSKT-DVDKIENQLLKEIKSLED--ELKNLKG 59 D K ++P + F++ + Q E N +K +V +KE + +D ++NL Sbjct: 140 DDKDEIKPEATKQVSFEELFNQPSEEINETKKPEVQIFSTDKVKEPEQFDDFYSIENLTK 199 Query: 60 LKN---------QAEDNPELDKKINHLEVDLNRL--VNEYKNFQFQKNHMVDKVSELDNL 108 N Q +D P + K+I + ++ +++Y N + + D ++D+L Sbjct: 200 AINPVHKTIQYDQNDDQPFVVKRILKEQHPTKKVDELDDYNNKELLLEN-ADLKKQIDDL 258 Query: 109 TRFYKNELTRLQQENADFLN------SKYANLANFQANYHNKLNDFHRLIENQNQTINRL 162 +++ L+QE D SK+ + Q + + D + ++N+ IN L Sbjct: 259 KENNNDQIFDLEQEIDDLKRRLSEEKSKHLHTKKLQDDLLQENRDLYEQLQNKPVAINPL 318 Query: 163 NQKINGN-------QNLIDNNVALLQNPNITVEKKNYLLNVIDQLYNEL-DQL----ENQ 210 + ++N + L+ + + L+N + V+++ LL V++ NEL +QL E Sbjct: 319 SDEVNEELENLKQEKALLSDQLDALKNKSSNVQQQLALLPVLNNQINELQNQLLTAREAN 378 Query: 211 KRLLSIEYENTYRELVSADNELQNVYENIDQNQIQ----FKHQYQTYRDELSQLERKIQL 266 +RL +E EN + + NEL+ +++N ++ + +QY+ DE K+Q+ Sbjct: 379 QRLDLVEQENDFLK-----NELKKLHDNTSNDENEKYDDLLNQYELLFDENETKFDKLQV 433 Query: 267 TKQEL-VDKESALRVKIDDADFYIN----ARLAELDDVAKQLSFQD----------GITK 311 +Q L +D + + + D ++ R + D + SF++ G+T Sbjct: 434 KQQALNLDYQKTISALKHENDVLLDEIEWTRSKDNDFNNTKNSFEEQKKALDEKLNGLTI 493 Query: 312 QNAQHVEDKLVAL---NKEKDRLNTQK-----------EAFFNLRQSALIDINKLQQENE 357 QN Q ++DK+ L N+EK LNT + + FN+ Q L + ++ Sbjct: 494 QN-QQLQDKIAELEEWNEEKSNLNTNQLVNLQQQLKDSQNLFNVAQDKLATLEEVNLALN 552 Query: 358 LFAKHLEHQQNEFEQKQSDSLLKLETEYKALQHKINEFKNESATKSEELLNQERELFEKR 417 LE + + E ++ L KL+ +++ LQ + K + + LN E ++ Sbjct: 553 EKINDLEDELSGSENS-NNLLAKLQADHEILQESYGKLKTDFEKLKKNKLNDANEQYQ-- 609 Query: 418 REIDTLLTQASLEYEHQRESSQLLKDKQNEVKQHFQNLEYAKKELDKERNLLDQQKKVDS 477 ++ + + + E E ++S + N++KQ +LE AKKEL Q V S Sbjct: 610 -DLLSAFEETNSELEKAKQSLSASDSENNQLKQQINSLENAKKEL--------QFTPVTS 660 Query: 478 EAIFQLKEKVAQERKELEELYLVKKQKQDQKENELLFFEKQLKQHQADFENELEAKQQEL 537 + + L+EL +K +K E LF E Q Q+Q + N++ A Q E Sbjct: 661 D-------------EHLDELETLKIEK------EQLFLENQALQNQLQYFNDISANQTE- 700 Query: 538 FEAKHALERSFIKLEDKEKDLNTKAQQIANEFSQLKTDKSKSADFELMLQNEYENLQQEK 597 E K A D++K + ++K + K DF ++QN+ + L + Sbjct: 701 -EIKEA--------SDEDKPV------------EIKKPRIKKRDF--VIQNKDDKLAKLS 737 Query: 598 QKLFQERTYFERNAAVLSN 616 +K + + Y ER A + +N Sbjct: 738 KK-ERIQAYAERLAKINAN 755 Score = 86.7 bits (213), Expect = 6e-19 Identities = 146/697 (20%), Positives = 292/697 (41%), Gaps = 98/697 (14%) Query: 194 LNVIDQLY--NELDQLENQKRLLSIEYENTYRELVSADNELQNVY-ENIDQNQIQFKHQY 250 L V+D+ + N L+ NQ + E + + + + + Q+V + I + K Sbjct: 76 LKVLDKKWDKNVLNHYANQLKTREEEQQTVDQTMAFQEVDDQSVLTKEIKTGFQELKPSV 135 Query: 251 QTYRDELSQL--ERKIQLTKQELVDK--ESALRVKIDDADFYINARLAELDDVAKQLSFQ 306 T D+ ++ E Q++ +EL ++ E K + + ++ E + S + Sbjct: 136 ITAEDDKDEIKPEATKQVSFEELFNQPSEEINETKKPEVQIFSTDKVKEPEQFDDFYSIE 195 Query: 307 DGITKQNAQHVEDKLVALNKEKDRLNTQKEAFFNLRQSALIDINKLQQENELFAKH--LE 364 + N H K + ++ D+ K + +D EL ++ L+ Sbjct: 196 NLTKAINPVH---KTIQYDQNDDQPFVVKRILKEQHPTKKVDELDDYNNKELLLENADLK 252 Query: 365 HQQNEFEQKQSDSLLKLETEYKALQHKINEFKNESA-TKS--EELLNQERELFEKRRE-- 419 Q ++ ++ +D + LE E L+ +++E K++ TK ++LL + R+L+E+ + Sbjct: 253 KQIDDLKENNNDQIFDLEQEIDDLKRRLSEEKSKHLHTKKLQDDLLQENRDLYEQLQNKP 312 Query: 420 --IDTLLTQASLEYEHQRESSQLLKDKQNEVKQHFQNLEYAKKELDKERNLLDQQKKVDS 477 I+ L + + E E+ ++ LL D+ + +K N++ L N +++ Sbjct: 313 VAINPLSDEVNEELENLKQEKALLSDQLDALKNKSSNVQQQLALLPVLNNQINE------ 366 Query: 478 EAIFQLKEKVAQERKELEELYLVKKQKQDQKENELLFFEKQLKQHQADFENELEAKQQEL 537 L+ ++ R+ + L LV+ Q+ D +NEL K+L + ++ ENE K +L Sbjct: 367 -----LQNQLLTAREANQRLDLVE-QENDFLKNEL----KKLHDNTSNDENE---KYDDL 413 Query: 538 FEAKHAL----ERSFIKLEDKEKDLNTKAQQIANEFS--------QLKTDKSKSADFELM 585 L E F KL+ K++ LN Q+ + +++ +SK DF Sbjct: 414 LNQYELLFDENETKFDKLQVKQQALNLDYQKTISALKHENDVLLDEIEWTRSKDNDF--- 470 Query: 586 LQNEYENLQQEKQKLFQERT--------YFERNAAVLSNXXXXXXXXXXXXXXTLDQLTK 637 N +N +E++K E+ + A L L Q K Sbjct: 471 --NNTKNSFEEQKKALDEKLNGLTIQNQQLQDKIAELEEWNEEKSNLNTNQLVNLQQQLK 528 Query: 638 SFEQERLINQREHKELVASVEKQKEILGKKLQDFSQT---SLNASKNLAEREMAIKFKEK 694 + + L N + K +A++E+ L +K+ D S N++ LA+ + + ++ Sbjct: 529 --DSQNLFNVAQDK--LATLEEVNLALNEKINDLEDELSGSENSNNLLAKLQADHEILQE 584 Query: 695 -------EIEATEKQLLNDVNNA--------EVIQADLAQLNQSLNQERSELQNAKQRIA 739 + E +K LND N E ++L + QSL+ SE KQ+I Sbjct: 585 SYGKLKTDFEKLKKNKLNDANEQYQDLLSAFEETNSELEKAKQSLSASDSENNQLKQQIN 644 Query: 740 DFHNDSLKKLNEYELSLQKRLQELQTLEANQKQHSYQNQAYFEGELDKLNREKQAFLNLR 799 N + K+L ++ + L EL+TL+ ++Q +NQA L + Q F ++ Sbjct: 645 SLEN-AKKELQFTPVTSDEHLDELETLKIEKEQLFLENQA--------LQNQLQYFNDIS 695 Query: 800 KKQTMEVDAIKQRLSDKHQALNMQQAELDRKTHELNN 836 QT E+ + SD+ + + +++ + ++ + N Sbjct: 696 ANQTEEI----KEASDEDKPVEIKKPRIKKRDFVIQN 728 Score = 57.4 bits (137), Expect = 4e-10 Identities = 170/809 (21%), Positives = 320/809 (39%), Gaps = 132/809 (16%) Query: 637 KSFEQERLINQREHKELVAS-VEKQKEILGKKLQDFSQTSLNA---SKNLAEREMAIKFK 692 K E N+ + K L+ V++ IL FS + + A +NL E+ Sbjct: 5 KELEISDFDNELDEKTLLKELVQRTNNIL------FSPSKITAIPFERNLLEKTFFGTVD 58 Query: 693 EKEIEATEKQLLNDVNNAEVIQA--DLAQLNQSLNQERS---ELQNAKQRIADFHNDSLK 747 E E E + N + + +V+ D LN NQ ++ E Q Q +A D Sbjct: 59 EAEKEKSIVSFFNWMIDLKVLDKKWDKNVLNHYANQLKTREEEQQTVDQTMAFQEVDDQS 118 Query: 748 KLNEYELSLQKRLQELQ--TLEANQKQHSYQNQAYFEGELDKLNREKQAFLNLRKKQTME 805 L + ++ QEL+ + A + + +A + ++L + +N KK ++ Sbjct: 119 VLTK---EIKTGFQELKPSVITAEDDKDEIKPEATKQVSFEELFNQPSEEINETKKPEVQ 175 Query: 806 V---DAIKQ--RLSDKHQALNMQQAELDRKTHELNNAFLNHDAD---QKSLQDQLATVKE 857 + D +K+ + D + N+ +A H+ N D ++ L++Q T K+ Sbjct: 176 IFSTDKVKEPEQFDDFYSIENLTKAI--NPVHKTIQYDQNDDQPFVVKRILKEQHPT-KK 232 Query: 858 TQKLIDLERSALLEKQREFAENVAGFKRHWSNKTSQL-QKIYXXXXXXXXXXXXXXXXXX 916 +L D LL + + + + K + +++ L Q+I Sbjct: 233 VDELDDYNNKELLLENADLKKQIDDLKENNNDQIFDLEQEIDDLKRRLSEEKSKHLHTKK 292 Query: 917 IAFSDLQKDYQVFELQKDQEFRQIEAKQRELDKLAEKNNQVKLELDNRFQALQNQKQDTV 976 + LQ++ ++E +++ I E+++ E Q K L ++ AL+N K V Sbjct: 293 LQDDLLQENRDLYEQLQNKPVA-INPLSDEVNEELENLKQEKALLSDQLDALKN-KSSNV 350 Query: 977 QAQLELEREQHQLNLEQTAFNQANESLLKQREQLTKKIQAFHYELKKRNQFLALKGKRLF 1036 Q QL L L + N+ LL RE +++ E N FL + K+L Sbjct: 351 QQQLAL------LPVLNNQINELQNQLLTAREA-NQRLDLVEQE----NDFLKNELKKLH 399 Query: 1037 --AKEQDQQRKDQEINWRFKQFEKEYTDFDXXXXXXXXXXXXXXXXXSQSNVELERKREK 1094 + ++ D +N F++ T FD +L+ K++ Sbjct: 400 DNTSNDENEKYDDLLNQYELLFDENETKFD----------------------KLQVKQQA 437 Query: 1095 LATDFTN-LNKVQHNTQINRDQLNSQIRQFLLERKNFQRFSNEANAKKAFLIKRLRSFAS 1153 L D+ ++ ++H D L +I + +F N +K L ++L + Sbjct: 438 LNLDYQKTISALKHEN----DVLLDEIEWTRSKDNDFNNTKNSFEEQKKALDEKL----N 489 Query: 1154 NLKLQKEALAIQKLEFDKRDEQQKKELQQATLQLEQFKFEKQNFDIEKQRQLVAIKTQCE 1213 L +Q + L + E ++ +E++ + L+Q + QN Q +L Sbjct: 490 GLTIQNQQLQDKIAELEEWNEEKSNLNTNQLVNLQQQLKDSQNLFNVAQDKLAT------ 543 Query: 1214 KLSDEKKALNQKLVELKN-LSQTYLANK--NKAEYSQQQLQQKY----TNLLDLKEN--- 1263 L + ALN+K+ +L++ LS + +N K + + LQ+ Y T+ LK+N Sbjct: 544 -LEEVNLALNEKINDLEDELSGSENSNNLLAKLQADHEILQESYGKLKTDFEKLKKNKLN 602 Query: 1264 ------------LERTKDQLDKKHRSIFA------RLTKFANDLRFEKKQL----LKAQR 1301 E T +L+K +S+ A +L + N L KK+L + + Sbjct: 603 DANEQYQDLLSAFEETNSELEKAKQSLSASDSENNQLKQQINSLENAKKELQFTPVTSDE 662 Query: 1302 IVDDKNRLLKENERNLHFLSNETERKRAVLEDQISYFEKQRKQATDAILAS---HKEVKK 1358 +D+ L E E+ FL N+ L++Q+ YF T+ I + K V+ Sbjct: 663 HLDELETLKIEKEQ--LFLENQ------ALQNQLQYFNDISANQTEEIKEASDEDKPVEI 714 Query: 1359 KEGELQKLLVELETRKTKLNNDFAKFSRQ 1387 K+ ++K ++ + KL AK S++ Sbjct: 715 KKPRIKKRDFVIQNKDDKL----AKLSKK 739 Score = 50.4 bits (119), Expect = 5e-08 Identities = 88/480 (18%), Positives = 197/480 (41%), Gaps = 51/480 (10%) Query: 1156 KLQKEALAIQKLEFDKRDEQQKKELQQATLQLEQFKFEKQNFDIEKQRQLVAI-KTQCEK 1214 +LQ + +AI L + +E + + ++A L + + ++ ++++Q L+ + Q + Sbjct: 307 QLQNKPVAINPLSDEVNEELENLKQEKALLSDQLDALKNKSSNVQQQLALLPVLNNQINE 366 Query: 1215 LSDE---KKALNQKLVELKNLSQTYLANKNKA--EYSQQQLQQKYTNLLDLKENL----E 1265 L ++ + NQ+L +L +L N+ K + + +KY +LL+ E L E Sbjct: 367 LQNQLLTAREANQRL-DLVEQENDFLKNELKKLHDNTSNDENEKYDDLLNQYELLFDENE 425 Query: 1266 RTKDQLDKKHRSIFARLTKFANDLRFEKKQLLKAQRIVDDKNRLLKENERNLHFLSNETE 1325 D+L K +++ K + L+ E LL D+ + + + + N E Sbjct: 426 TKFDKLQVKQQALNLDYQKTISALKHENDVLL-------DEIEWTRSKDNDFNNTKNSFE 478 Query: 1326 RKRAVLEDQISYFEKQRKQATDAILASHKEVKKKEGELQKLLVELETRKTKLNNDFAKFS 1385 ++ L+++++ Q +Q D I + ++K LV L+ + N F Sbjct: 479 EQKKALDEKLNGLTIQNQQLQDKIAELEEWNEEKSNLNTNQLVNLQQQLKDSQNLFNVAQ 538 Query: 1386 RQREEFENQRXXXXXXXXXXXXXXNSNNFKTKAIQEIENSYKRGMEELNFQKKEFDK-NK 1444 + E + + + +++ ++ E K +F+K K Sbjct: 539 DKLATLEEVNLALNEKINDLEDELSGSENSNNLLAKLQADHEILQESYGKLKTDFEKLKK 598 Query: 1445 SRLYEYFRKMRDEIERKESQVKLVLKETQRKANLLEAQANKLNIEKNTIDFKEKELKAFK 1504 ++L + + +D + E + L++ ++ + +++ N+L + N+++ +KEL+ Sbjct: 599 NKLNDANEQYQDLLSAFE-ETNSELEKAKQSLSASDSENNQLKQQINSLENAKKELQFTP 657 Query: 1505 DKVDQDIDSTXXXXXXXXXXXXXXXXXXXSLIERERAINSKDSLLNK----------KIE 1554 D+ +D IE+E+ +L N+ + E Sbjct: 658 VTSDEHLDELETLK-----------------IEKEQLFLENQALQNQLQYFNDISANQTE 700 Query: 1555 TIKRQLHDKEMRVLRLVDRMKLAEQKYQTEINRLRTQTFDSEKQDIKNFFPPLFKINGND 1614 IK + D++ V R+K + Q + ++L S+K+ I+ + L KIN N+ Sbjct: 701 EIK-EASDEDKPVEIKKPRIKKRDFVIQNKDDKLAKL---SKKERIQAYAERLAKINANE 756 >SCER-S28-01-001306 ORFP:YDR285W ZIP1, Chr IV from 1032427-1035054 Length = 875 Score = 75.9 bits (185), Expect = 1e-15 Identities = 130/612 (21%), Positives = 258/612 (42%), Gaps = 96/612 (15%) Query: 332 NTQKEAFFNLRQSALIDINKLQQENELFAKHLEHQQNEFEQKQSDSLLKLETEYKALQHK 391 NTQ+ NL+Q ++ K QQ+N L+ + + K ++ + K ++ + LQ + Sbjct: 186 NTQRICS-NLKQ----ELQKQQQDNAKLKVRLQSYASNSD-KINEKVGKYKSCLETLQER 239 Query: 392 I---NEFKNESATKSEELLNQERELFEKRREIDTLLTQASLEYEHQRESSQLLKDKQNEV 448 I KN TK ++L Q +L+++R I T + + + K+ E+ Sbjct: 240 IATLTSHKNNQETKLKDL-RQNHQLYQRR--ISGFKTSIENLNKTINDLGKNKKEADAEL 296 Query: 449 KQHFQNLEYAKKELDKERNLLDQQKKVDSEAIFQLKEKVAQERKELEELY-------LVK 501 + + +EY K+ELD L ++K +S I ++ + + K +E + L++ Sbjct: 297 MKKGKEIEYLKRELDDCSGQLSEEKIKNSSLIQEMGKNREEMIKSIENFFSEDKAHHLLQ 356 Query: 502 KQKQDQKENELLFFEKQLKQHQADFENELEAKQQELFEAKHALERSFIKL------EDKE 555 K +++ ++L FEK+L++H ++ L + + + +K E+ E Sbjct: 357 FNKFEERVHDL--FEKKLQKHFDVAKDTLNVGLRNTTVELSSNTETMLKQQYEDIKENLE 414 Query: 556 KDLNTKAQQIANEFSQLKTDK------------SKSADFELMLQNEYENLQQEKQKLFQE 603 + +++ ++A ++L + + S + + L +E N +QE L + Sbjct: 415 QKMSSSKDEMAKTINELSVTQKGLIMGVQEELLTSSGNIQTALVSEMNNTRQE---LLDD 471 Query: 604 RTYFERNAAVLSNXXXXXXXXXXXXXXTLDQLTKSFEQERLINQREHKELVASV---EKQ 660 + +N A L N +++ K E ER + ++++S+ E Q Sbjct: 472 ASQTAKNYASLENLVKAYKAEIVQSNEYEERI-KHLESERSTLSSQKNQIISSLGTKEAQ 530 Query: 661 KEILGKKLQ----DFSQTSLNASKNLAEREMAIKFKEKEIE-----------ATEKQLLN 705 E L KKL+ + SQ S ++L E+ + + K+++ T+ N Sbjct: 531 YEDLVKKLEAKNIEISQIS-GKEQSLTEKNENLSNELKKVQDQLEKLNNLNITTKSNYEN 589 Query: 706 DVNNAEVIQADLAQLNQSLNQERSELQNAKQRIADFHNDSLKKLNEYELSLQKRLQELQT 765 +++ I L N +L Q +L K+ H L+ + LQK E+ Sbjct: 590 KISSQNEIVKALVSENDTLKQRIQQLVEIKENEQKDHTTKLEAFQKNNEQLQKLNVEVVQ 649 Query: 766 LEANQKQHSYQNQAYFEGELDKLNREKQAFLNLRKKQTMEVDAIKQRLSDKHQALNMQQA 825 L+A+ E EL++ NR + L KK+T +++ LSD + L Q Sbjct: 650 LKAH------------ELELEEQNRHLKNC--LEKKET----GVEESLSDV-KTLKQQVI 690 Query: 826 ELDRKTHELNNAFLNHDADQKSLQDQLATVKET----QKLIDLERSALLEKQREFAENVA 881 L + ++ A++ LQD L +++E Q+ + ++ L +K +E E Sbjct: 691 VLKSEKQDIT-------AEKLELQDNLESLEEVTKNLQQKVQSQKRELEQKIKELEE--- 740 Query: 882 GFKRHWSNKTSQ 893 K H N+ S+ Sbjct: 741 -IKNHKRNEPSK 751 Score = 71.6 bits (174), Expect = 2e-14 Identities = 132/610 (21%), Positives = 253/610 (41%), Gaps = 92/610 (15%) Query: 30 NRSKTDVDKIENQLLKEIKSLEDELKNLKG-LKNQAEDNPELDKKINHLEVDLNRLVNEY 88 N S T + + LL+ + + NLK L+ Q +DN +L ++ + +++ + Sbjct: 170 NNSSTSSNDV---LLEAFTNTQRICSNLKQELQKQQQDNAKLKVRLQSYASNSDKINEKV 226 Query: 89 KNFQFQKNHMVDKVSELDNLTRFYKNELTRLQQENADFLNSKYANLANFQANYHNKLNDF 148 ++ + ++++ LT N+ T+L+ +L Y +++ F Sbjct: 227 GKYKSCLETLQERIA---TLTSHKNNQETKLK------------DLRQNHQLYQRRISGF 271 Query: 149 HRLIENQNQTINRLNQKINGNQNLIDNNVALLQNPNITVEKKNYLLNVIDQLYNELDQLE 208 IEN N+TIN L +N + + L++ I+ L ELD Sbjct: 272 KTSIENLNKTINDL------GKNKKEADAELMKKG-----------KEIEYLKRELDDCS 314 Query: 209 NQKRLLSIEYENTYRELVSADNELQNVYEN-IDQNQIQFKHQYQTYRDELSQL-ERKIQ- 265 Q I+ + +E+ E+ EN +++ Q+ + + + L E+K+Q Sbjct: 315 GQLSEEKIKNSSLIQEMGKNREEMIKSIENFFSEDKAHHLLQFNKFEERVHDLFEKKLQK 374 Query: 266 ---------------LTKQELVDKESALRVKIDDADFYINARL-AELDDVAKQLSFQDGI 309 T + + E+ L+ + +D + ++ + D++AK ++ Sbjct: 375 HFDVAKDTLNVGLRNTTVELSSNTETMLKQQYEDIKENLEQKMSSSKDEMAKTINELSVT 434 Query: 310 TKQNAQHVEDKLVALNKE------KDRLNTQKEAFFNLRQSALIDINKLQQENELFAKHL 363 K V+++L+ + + NT++E + Q+A N EN + A Sbjct: 435 QKGLIMGVQEELLTSSGNIQTALVSEMNNTRQELLDDASQTAK---NYASLENLVKAYKA 491 Query: 364 E-HQQNEFEQKQSDSLLKLETEYKALQHKINEFKNESATKSEELLNQERELFEKRREIDT 422 E Q NE+E++ + LE+E L + N+ + TK + + ++L K EI Sbjct: 492 EIVQSNEYEER----IKHLESERSTLSSQKNQIISSLGTKEAQYEDLVKKLEAKNIEISQ 547 Query: 423 LLTQASLEYEHQRESSQLLKDKQNEVKQHFQNLEYAKKELDKERNLLDQQKKVDSEAIFQ 482 + + E S LK Q+++++ NL K N + Q ++ + + Sbjct: 548 ISGKEQSLTEKNENLSNELKKVQDQLEK-LNNLNITTK--SNYENKISSQNEIVKALVSE 604 Query: 483 ---LKEKVAQ--ERKELEELYLVKKQKQDQKENELL----FFEKQLKQHQADFENELEAK 533 LK+++ Q E KE E+ K + QK NE L QLK H E ELE + Sbjct: 605 NDTLKQRIQQLVEIKENEQKDHTTKLEAFQKNNEQLQKLNVEVVQLKAH----ELELEEQ 660 Query: 534 QQELFEAKHALERSFIKLEDKEKDLNTKAQQIANEFSQLKTDKSKSADFELMLQNEYENL 593 + L K+ LE+ +E+ D+ T QQ+ LK++K +L LQ+ E+L Sbjct: 661 NRHL---KNCLEKKETGVEESLSDVKTLKQQVI----VLKSEKQDITAEKLELQDNLESL 713 Query: 594 QQEKQKLFQE 603 ++ + L Q+ Sbjct: 714 EEVTKNLQQK 723 Score = 69.7 bits (169), Expect = 8e-14 Identities = 97/493 (19%), Positives = 207/493 (41%), Gaps = 40/493 (8%) Query: 29 KNRSKTDVDKIENQLLKEIKSLEDELKNLKGLKNQAEDNPELDKKINHLEVDLNRLVNEY 88 KN+ + D + ++ KEI+ L+ EL + G +E+ + I + + ++ Sbjct: 287 KNKKEADAELMKKG--KEIEYLKRELDDCSG--QLSEEKIKNSSLIQEMGKNREEMIKSI 342 Query: 89 KNF--QFQKNHMVDKVSELDNLTRFYKNELTRLQQENADFLNSKYANLA-NFQANYHNKL 145 +NF + + +H++ + + ++ +L + D LN N +N L Sbjct: 343 ENFFSEDKAHHLLQFNKFEERVHDLFEKKLQKHFDVAKDTLNVGLRNTTVELSSNTETML 402 Query: 146 NDFHRLIENQNQTINRLNQKINGNQNLIDNNVALLQNPNITVEKKNYLLNVIDQLYNELD 205 + I+ L QK++ +++ + + ++V +K ++ V ++L L Sbjct: 403 KQQYEDIKEN------LEQKMSSSKDEMAKTIN-----ELSVTQKGLIMGVQEEL---LT 448 Query: 206 QLENQKRLLSIEYENTYRELVSADNELQNVYENIDQNQIQFKH---QYQTYRDELSQLER 262 N + L E NT +EL+ ++ Y +++ +K Q Y + + LE Sbjct: 449 SSGNIQTALVSEMNNTRQELLDDASQTAKNYASLENLVKAYKAEIVQSNEYEERIKHLES 508 Query: 263 K---IQLTKQELVDKESALRVKIDDADFYINARLAELDDVAKQLSFQDGITKQNAQHVED 319 + + K +++ + +D + A+ E+ ++ + + +T++N +++ + Sbjct: 509 ERSTLSSQKNQIISSLGTKEAQYEDLVKKLEAKNIEISQISGK---EQSLTEKN-ENLSN 564 Query: 320 KLVALNKEKDRLN----TQKEAFFNLRQSALIDINKLQQENELFAKHLEHQQNEFEQKQS 375 +L + + ++LN T K + N S + L EN+ + ++ E +Q Sbjct: 565 ELKKVQDQLEKLNNLNITTKSNYENKISSQNEIVKALVSENDTLKQRIQQLVEIKENEQK 624 Query: 376 DSLLKLETEYKALQHKINEFKNESATKSEELLNQERELFEKRREIDTLLTQASLEYEHQR 435 D KLE A Q K NE + + +L E EL E+ R + L + E Sbjct: 625 DHTTKLE----AFQ-KNNEQLQKLNVEVVQLKAHELELEEQNRHLKNCLEKKETGVEESL 679 Query: 436 ESSQLLKDKQNEVKQHFQNLEYAKKELDKERNLLDQQKKVDSEAIFQLKEKVAQERKELE 495 + LK + +K Q++ K EL L++ K + + K ++ Q+ KELE Sbjct: 680 SDVKTLKQQVIVLKSEKQDITAEKLELQDNLESLEEVTKNLQQKVQSQKRELEQKIKELE 739 Query: 496 ELYLVKKQKQDQK 508 E+ K+ + +K Sbjct: 740 EIKNHKRNEPSKK 752 Score = 63.2 bits (152), Expect = 7e-12 Identities = 121/655 (18%), Positives = 263/655 (40%), Gaps = 106/655 (16%) Query: 149 HRLIENQNQTINR-LNQKINGNQNLIDNNVALLQ-----NPNITVEKKNYLLNVIDQLYN 202 H I N + + N L + Q + N LQ N + V ++Y N D++ Sbjct: 166 HTSINNSSTSSNDVLLEAFTNTQRICSNLKQELQKQQQDNAKLKVRLQSYASNS-DKINE 224 Query: 203 ELDQLENQKRLLSIEYENTYRELVSADNELQNVYENIDQNQIQFKHQYQTYRDELSQLER 262 ++ + ++ L + L S N + +++ QN ++ + ++ + L + Sbjct: 225 KVGKYKSCLETL----QERIATLTSHKNNQETKLKDLRQNHQLYQRRISGFKTSIENLNK 280 Query: 263 KIQLTKQELVDKESALRVKIDDADFYINARLAELDDVAKQLSFQDGITKQNAQHVEDKLV 322 I + + ++ L K + ++ ELDD + QLS + +N+ +++ Sbjct: 281 TINDLGKNKKEADAELMKKGKEIEYLKR----ELDDCSGQLSEEK---IKNSSLIQE--- 330 Query: 323 ALNKEKDRLNTQKEAFFNLRQSA-LIDINKLQQE-NELFAKHLEHQ------------QN 368 + K ++ + E FF+ ++ L+ NK ++ ++LF K L+ +N Sbjct: 331 -MGKNREEMIKSIENFFSEDKAHHLLQFNKFEERVHDLFEKKLQKHFDVAKDTLNVGLRN 389 Query: 369 EFEQKQSDSLLKLETEYKA----LQHKINEFKNESATKSEELLNQERELFEKRREIDTLL 424 + S++ L+ +Y+ L+ K++ K+E A EL ++ L +E LL Sbjct: 390 TTVELSSNTETMLKQQYEDIKENLEQKMSSSKDEMAKTINELSVTQKGLIMGVQE--ELL 447 Query: 425 T-----QASLEYEHQRESSQLLKDKQNEVKQH--FQNLEYA-KKELDKERNLLDQQKKVD 476 T Q +L E +LL D K + +NL A K E+ + ++ K ++ Sbjct: 448 TSSGNIQTALVSEMNNTRQELLDDASQTAKNYASLENLVKAYKAEIVQSNEYEERIKHLE 507 Query: 477 SEAIFQLKEKVAQERKELEELYLVKKQKQDQKENELLFFEKQLKQHQADFENELEAKQQE 536 SE + ++N+++ + D +LEAK E Sbjct: 508 SE-----------------------RSTLSSQKNQIISSLGTKEAQYEDLVKKLEAKNIE 544 Query: 537 LFEAKHALERSFIKLEDKEKDLNTKAQQIANEFSQLKTDKSKSADFELMLQNEYENLQQE 596 + + + KE+ L K + ++NE +++ K + + ++ YEN Sbjct: 545 ISQ-----------ISGKEQSLTEKNENLSNELKKVQDQLEKLNNLNITTKSNYENKISS 593 Query: 597 KQKLFQERTYFERNAAVLSNXXXXXXXXXXXXXXTLDQLTKSFEQERLINQREHKELVAS 656 + ++ + A V N TL Q + + + Q++H + + Sbjct: 594 QNEIVK--------ALVSEN-------------DTLKQRIQQLVEIKENEQKDHTTKLEA 632 Query: 657 VEKQKEILGKKLQDFSQTSLNASKNLAEREMAIKFKEKEIEATEKQLLNDVNNAEVIQAD 716 +K E L K + Q + L E+ +K ++ E ++ L+DV + Sbjct: 633 FQKNNEQLQKLNVEVVQLKAH-ELELEEQNRHLKNCLEKKETGVEESLSDVKTLKQQVIV 691 Query: 717 LAQLNQSLNQERSELQNAKQRIADFHNDSLKKLNEYELSLQKRLQELQTLEANQK 771 L Q + E+ ELQ+ + + + + +K+ + L+++++EL+ ++ +++ Sbjct: 692 LKSEKQDITAEKLELQDNLESLEEVTKNLQQKVQSQKRELEQKIKELEEIKNHKR 746 Score = 55.8 bits (133), Expect = 1e-09 Identities = 85/388 (21%), Positives = 164/388 (42%), Gaps = 57/388 (14%) Query: 60 LKNQAEDNPE-LDKKINHLEVDLNRLVNEYKNFQFQKNHMVDKVSEL----DNLTRFYKN 114 LK Q ED E L++K++ + ++ + +NE QK ++ EL N+ + Sbjct: 402 LKQQYEDIKENLEQKMSSSKDEMAKTINELS--VTQKGLIMGVQEELLTSSGNIQTALVS 459 Query: 115 ELTRLQQENADFLNS---KYANLANFQANYHNKL---NDFHRLIEN-----------QNQ 157 E+ +QE D + YA+L N Y ++ N++ I++ +NQ Sbjct: 460 EMNNTRQELLDDASQTAKNYASLENLVKAYKAEIVQSNEYEERIKHLESERSTLSSQKNQ 519 Query: 158 TINRLNQKINGNQNLIDN----NVALLQ---NPNITVEKKNYLLNVIDQLYNELDQLENQ 210 I+ L K ++L+ N+ + Q EK L N + ++ ++L++L N Sbjct: 520 IISSLGTKEAQYEDLVKKLEAKNIEISQISGKEQSLTEKNENLSNELKKVQDQLEKLNN- 578 Query: 211 KRLLSIEYENTYRELVSADNELQNVYENIDQNQIQFKHQYQTYRDELSQLERKIQLTKQE 270 L+I ++ Y +S+ NE+ V + +N + Q E+ + E+K TK E Sbjct: 579 ---LNITTKSNYENKISSQNEI--VKALVSENDTLKQRIQQLV--EIKENEQKDHTTKLE 631 Query: 271 LVDKESALRVKIDDADFYINARLAELDDVAKQLSF-----QDGITKQ--NAQHVEDKLVA 323 K + K++ + A EL++ + L + G+ + + + ++ +++ Sbjct: 632 AFQKNNEQLQKLNVEVVQLKAHELELEEQNRHLKNCLEKKETGVEESLSDVKTLKQQVIV 691 Query: 324 LNKEK-----------DRLNTQKEAFFNLRQSALIDINKLQQENELFAKHLEHQQNEFEQ 372 L EK D L + +E NL+Q +L+Q+ + + H++NE + Sbjct: 692 LKSEKQDITAEKLELQDNLESLEEVTKNLQQKVQSQKRELEQKIKELEEIKNHKRNEPSK 751 Query: 373 KQSDSLLKLETEYKALQHKINEFKNESA 400 K + + K K N F N SA Sbjct: 752 KGTQNFTKPSDSPKKNATTSNLFPNNSA 779 Score = 55.5 bits (132), Expect = 1e-09 Identities = 137/722 (18%), Positives = 281/722 (38%), Gaps = 96/722 (13%) Query: 348 DINKLQQENELFAKHLEHQQNEFEQKQSDSLLKLET--EYKALQHK--INEFKNESATKS 403 +I ++++ +E AK E +++ + S++ LK EY K ++ N S+T S Sbjct: 119 EITEVREVSEGVAK--ETKESHGDPNDSETTLKDSKMHEYTMTNGKAPLHTSINNSSTSS 176 Query: 404 EELLNQERELFEKRREIDTLLTQASLEYEHQRESSQLLKDKQNEVKQHFQNLEYAKKELD 463 ++L E F + I + L Q E + Q++ + LK + ++ + N + +++ Sbjct: 177 NDVL---LEAFTNTQRICSNLKQ---ELQKQQQDNAKLKVR---LQSYASNSDKINEKVG 227 Query: 464 KERNLLDQQKKVDSEAIFQLKEKVAQ--ERKELEELYLVKKQKQDQKENELLFFEKQLKQ 521 K ++ L+ L+E++A K +E L +D ++N L+ ++++ Sbjct: 228 KYKSCLET-----------LQERIATLTSHKNNQETKL-----KDLRQNHQLY-QRRISG 270 Query: 522 HQADFENELEAKQQELFEAKHALERSFIKLEDKEKDLNTKAQQIANEFSQLKTDKSKSAD 581 + EN L +L + K + +K K K++ +++ + QL +K K++ Sbjct: 271 FKTSIEN-LNKTINDLGKNKKEADAELMK---KGKEIEYLKRELDDCSGQLSEEKIKNSS 326 Query: 582 FELMLQNEYENLQQEKQKLFQERTYFERNAAVLSNXXXXXXXXXXXXXXTLDQLTKSFEQ 641 + E + + + F E L + + Sbjct: 327 LIQEMGKNREEMIKSIENFFSE--------------------------DKAHHLLQFNKF 360 Query: 642 ERLINQREHKELVASVEKQKEILGKKLQDFS-QTSLNASKNLAEREMAIKFK-EKEIEAT 699 E ++ K+L + K+ L L++ + + S N L ++ IK E+++ ++ Sbjct: 361 EERVHDLFEKKLQKHFDVAKDTLNVGLRNTTVELSSNTETMLKQQYEDIKENLEQKMSSS 420 Query: 700 EKQLLNDVNNAEVIQADLAQ------LNQSLNQER---SELQNAKQRIADFHNDSLKKLN 750 + ++ +N V Q L L S N + SE+ N +Q + D + + K Sbjct: 421 KDEMAKTINELSVTQKGLIMGVQEELLTSSGNIQTALVSEMNNTRQELLDDASQTAKNYA 480 Query: 751 EYELSLQKRLQELQTLEANQKQHSYQNQAYFEGELDKLNREK-QAFLNLRKKQTMEVDAI 809 E L + E Q + + E E L+ +K Q +L K+ D + Sbjct: 481 SLE-----NLVKAYKAEIVQSNEYEERIKHLESERSTLSSQKNQIISSLGTKEAQYEDLV 535 Query: 810 KQRLSDKHQALNMQQAELDRKTHELNNAFLNHDADQKSLQDQLATVKETQKLIDLERSAL 869 K K +A N++ +++ K L N + K +QDQL + Sbjct: 536 K-----KLEAKNIEISQISGKEQSLTEKNENLSNELKKVQDQLEKLNNLNITTKSNYENK 590 Query: 870 LEKQREFAENVAGFKRHWSNKTSQLQKIYXXXXXXXXXXXXXXXXXXIAFSDLQKDY--- 926 + Q E + + + QL +I L + Sbjct: 591 ISSQNEIVKALVSENDTLKQRIQQLVEIKENEQKDHTTKLEAFQKNNEQLQKLNVEVVQL 650 Query: 927 QVFELQKDQEFRQIEAKQRELDKLAEKNNQVKLELDNRFQALQNQKQDTVQAQLELEREQ 986 + EL+ +++ R ++ + + E++ L + L+++KQD +LEL+ Sbjct: 651 KAHELELEEQNRHLKNCLEKKETGVEESLSDVKTLKQQVIVLKSEKQDITAEKLELQDNL 710 Query: 987 HQLNLEQTAFNQANESLLKQREQLTKKIQAFHYELK--KRNQFLALKGKRLFAKEQDQQR 1044 L Q +S ++ EQ K+++ E+K KRN+ + KG + F K D + Sbjct: 711 ESLEEVTKNLQQKVQSQKRELEQKIKELE----EIKNHKRNE-PSKKGTQNFTKPSDSPK 765 Query: 1045 KD 1046 K+ Sbjct: 766 KN 767 Score = 52.0 bits (123), Expect = 2e-08 Identities = 125/686 (18%), Positives = 261/686 (38%), Gaps = 116/686 (16%) Query: 948 DKLAEKNNQVKLELDNRFQALQNQKQDTVQAQLELEREQHQLNLEQTAFNQANESLLKQR 1007 D L E + N Q LQ Q+QD + ++ L+ S Sbjct: 178 DVLLEAFTNTQRICSNLKQELQKQQQDNAKLKVRLQ------------------SYASNS 219 Query: 1008 EQLTKKIQAFHYELKKRNQFLALKGKRLFAKEQDQQRKDQEINWRFKQFEKEYTDFDXXX 1067 +++ +K+ + L+ + +A L + + +Q+ K +++ + +++ + F Sbjct: 220 DKINEKVGKYKSCLETLQERIAT----LTSHKNNQETKLKDLRQNHQLYQRRISGFKTSI 275 Query: 1068 XXXXXXXXXXXXXXSQSNVELERKREKLATDFTNLNKVQHNTQINRDQLNSQIRQFLLER 1127 +++ EL +K +++ + + +L+ Q E+ Sbjct: 276 ENLNKTINDLGKNKKEADAELMKKGKEI--------------EYLKRELDDCSGQLSEEK 321 Query: 1128 KNFQRFSNEANAKKAFLIKRLRSFASNLKLQKEALAIQKLEFDKRDEQQKKELQQATLQL 1187 E + +IK + +F S K A L+F+K +E+ +L + LQ Sbjct: 322 IKNSSLIQEMGKNREEMIKSIENFFSEDK------AHHLLQFNKFEERVH-DLFEKKLQ- 373 Query: 1188 EQFKFEKQNFDIEKQRQLVAIK-TQCEKLSDEKKALNQKLVELK-NLSQTYLANKNKAEY 1245 ++FD+ K V ++ T E S+ + L Q+ ++K NL Q ++K++ Sbjct: 374 -------KHFDVAKDTLNVGLRNTTVELSSNTETMLKQQYEDIKENLEQKMSSSKDEMAK 426 Query: 1246 SQQQLQQKYTNLLDLKENLERTKDQLDKKHRSIFARLTKFANDLRFEKKQLLKAQRIVDD 1305 + +L L+ +++L +I L N+ R Q ++DD Sbjct: 427 TINELSVTQKGLI------MGVQEELLTSSGNIQTALVSEMNNTR---------QELLDD 471 Query: 1306 KNRLLKENERNLHFL----------SNETERKRAVLEDQISYFEKQRKQATDAILASHKE 1355 ++ K N +L L SNE E + LE + S Q+ Q ++ + Sbjct: 472 ASQTAK-NYASLENLVKAYKAEIVQSNEYEERIKHLESERSTLSSQKNQIISSLGTKEAQ 530 Query: 1356 VKKKEGELQKLLVE----------LETRKTKLNNDFAKFSRQREEFENQRXXXXXXXXXX 1405 + +L+ +E L + L+N+ K Q E+ N Sbjct: 531 YEDLVKKLEAKNIEISQISGKEQSLTEKNENLSNELKKVQDQLEKLNNLNITTKSNYENK 590 Query: 1406 XXXXNSNNFKTKAIQEIENSYKRGMEELNFQKKEFDKNKSRLYEYFRKMRDEIERKESQV 1465 +S N KA+ ++ K+ +++L K+ K+ + E F+K ++++ Sbjct: 591 I---SSQNEIVKALVSENDTLKQRIQQLVEIKENEQKDHTTKLEAFQKNNEQLQ------ 641 Query: 1466 KLVLKETQRKANLLEAQANKLNIEKNTIDFKEKELKAFKDKVDQDIDSTXXXXXXXXXXX 1525 KL ++ Q KA+ LE + ++ KN ++ KE + ++ D+ + Sbjct: 642 KLNVEVVQLKAHELELEEQNRHL-KNCLEKKETGV----EESLSDVKTLKQQVIVLKSEK 696 Query: 1526 XXXXXXXXSLIERERAINSKDSLLNKKIETIKRQLHDKEMRVLRLVDRMKLAEQKYQTEI 1585 L + ++ L +K+++ KR+L K + ++ + + E Sbjct: 697 QDITAEKLELQDNLESLEEVTKNLQQKVQSQKRELEQK-------IKELEEIKNHKRNEP 749 Query: 1586 NRLRTQTF----DSEKQD--IKNFFP 1605 ++ TQ F DS K++ N FP Sbjct: 750 SKKGTQNFTKPSDSPKKNATTSNLFP 775 >SYNE-PCC-01-000727 sll1120 Length = 1200 Score = 68.9 bits (167), Expect = 1e-13 Identities = 185/991 (18%), Positives = 372/991 (37%), Gaps = 102/991 (10%) Query: 559 NTKAQQIANEFS---QLKTDKSKSADFELMLQNEYENLQQEKQKLFQERTYFER-NAAVL 614 N +I+ E++ +LK K + + E + + ++L + R Y E N + Sbjct: 103 NGNGAKISKEWTVTRRLKVTKGGNYSSNYYINGETATVTELHEQLNELRIYPEGYNIVLQ 162 Query: 615 SNXXXXXXXXXXXXXXTLDQLTKSFEQER-LINQREHKELVASVEKQKEILGKKLQDFSQ 673 + +D+L E +R ++ +E V E++ +I+ +L+ Sbjct: 163 GDVTRIITMNSKERREIIDELAGVAEFDRKIVKTKETLTEVQDREERCQIIATELER--- 219 Query: 674 TSLNASKNLAEREMAIKFKEKEIEATEKQLLNDVNNAEVIQADLAQLNQSLNQERSELQN 733 + A+R+ A K++ + EKQ V + ++ +L L ++R + Q Sbjct: 220 ---TLERLAADRQKAEKYQALRQQVQEKQGWAKVIQYKAVEQQRQKLWGQLERDREQSQQ 276 Query: 734 AKQRI------ADFHNDSLKKLNEYELSL--QKRLQELQTLEANQKQHSYQNQAYFEGEL 785 +Q + L+KLN +L +++L L + Q Q Y +G+ Sbjct: 277 IQQALDQRSQAIQTQQTELEKLNAQVKALGEEEQLAVAAQLATQKAQRDQLQQRYNDGDR 336 Query: 786 DKLNREK-----QAFLNLRKKQTMEVDAIK-----QRLSDKHQALNMQQAELDRKTHELN 835 N ++ QA ++ ++Q + + K Q L A+ Q +L++ H+ Sbjct: 337 QITNHQQQVGQIQAEISQSQQQFLHIQQEKSFHNTQTLPQLEAAVQTSQQQLEQLRHQAQ 396 Query: 836 NAFLNHDADQKSLQDQLATVKETQKLIDLERSALL---EKQREFAENVAGFKRHWSNKTS 892 +A + TV + Q + +RS L E+Q++ N+A + + Sbjct: 397 AIASASEAWVQEQTQLSRTVNQLQDELIPQRSQLAQLEERQQQLLTNLAELTPLLTKVSV 456 Query: 893 QLQKIYXXXXXXXXXXXXXXXXXXIAFSDLQKDYQVFELQKDQEFRQI---EAKQRELDK 949 +L++ SDL + Q L ++ + R + + KQR+LDK Sbjct: 457 ELEEKQFAQGQFNFQGEALTSQIQTLASDLAQLEQERSLLQETQTRLLKEQQEKQRQLDK 516 Query: 950 LAEKNNQVKLELDNRFQALQNQKQDT-----VQAQLELEREQHQLNLEQTAFNQANESLL 1004 L E +Q + E+ + + D + AQL Q+QL LE A + ++ Sbjct: 517 L-EAASQAQQEVQGTYATKVILQSDLPGVCGLVAQLGQVEPQYQLALEIAAGGRLGFLVV 575 Query: 1005 KQREQLTKKIQAFHYELKKRNQFLALKGKRLFAKEQDQQRK------DQEINWRFKQFEK 1058 + I+ R FL L R K Q+ D +N ++ Sbjct: 576 EDDGVAAAGIEILKQAKAGRATFLPLNKIRP-PKGQNPNLSYAHGYIDLAVN--LIDGDR 632 Query: 1059 EYTDFDXXXXXXXXXXXXXXXXXSQSN----VELERKREKLATDFTNLNKVQHN-----T 1109 Y D + V LE + + + ++ Q + T Sbjct: 633 RYADIFAFIFGNTIVFDTLVNARNHLGKHRIVTLEGDLLEASGAMSGGSRNQRSGLRFGT 692 Query: 1110 QINRDQLN-SQIRQFLLERKNFQRFSNEANAKKAFLIKRLRSFASNLKLQKEALAIQKLE 1168 ++ D Q+RQ L + + Q + E ++ ++L ++ Q+ + Sbjct: 693 MVSEDTAEVKQLRQRLQDIQQVQGRNEELLLERTVRSRQLTQQLMEMRQQQREAQLH--- 749 Query: 1169 FDKRDEQQKKELQQATLQLEQFKFEKQNFDIEKQRQLVAIKTQCEKLSDEKKALNQKLVE 1228 ++ E+ L Q Q+ Q + +Q E Q+ L ++ L + + Q+L Sbjct: 750 -GEQTERDIARLSQQQTQINQQQINQQQKLAELQQNLALLQQSLPPLEQQLASAQQQLTA 808 Query: 1229 LKNLSQTYLANKN--------KAEYSQ--QQLQQKYTNLLDLKENLERTKDQLDKKHRSI 1278 L+ SQT+ + +AEY + Q L+Q +L DL+ + +R ++++ + I Sbjct: 809 LET-SQTHQQWQTIQIQIRTVEAEYQRQLQALRQGEDHLKDLQNSSQRLEEKIAQAQEKI 867 Query: 1279 FARLTKFANDLRFEKKQLLKAQRIVDDKNRLLKENERNLHFLSNETERKRAVLEDQISYF 1338 A DL ++Q LK ++ TE + A L +++ Sbjct: 868 AQHQ---AQDLTLAQEQ------------EQLKIALAEMNGAIQTTEAQLAKLSEKLG-- 910 Query: 1339 EKQRKQATDAILASHKEVKKKEGELQKLLVELETRKTKLNNDFAKFSRQREEFENQRXXX 1398 KQ D + +++ ++ E Q +L+T + + + + Q E E Sbjct: 911 --STKQERDRLETQLNQLRSQQQEQQWQWEKLQTNQQEYQENLTQLQTQLEALEQDLPDP 968 Query: 1399 XXXXXXXXXXXNSNNFKTKAIQEIENSYKRGMEELNFQK-------KEFDKNKSRLYEYF 1451 +N ++E+E S + G + L + +E++K ++RL E Sbjct: 969 WPEIPLLQDRDEANLDFANILEELERSIRNGQKRLEAMEPVNMLALQEYEKTEARLGELS 1028 Query: 1452 RKMRDEI-ERKESQVKLVLKETQRKANLLEA 1481 K++ ER E +++ T R+ + +A Sbjct: 1029 EKLQTIAGERTELLLRIENFTTLRRRSFQDA 1059 Score = 67.8 bits (164), Expect = 3e-13 Identities = 79/377 (20%), Positives = 155/377 (41%), Gaps = 47/377 (12%) Query: 384 EYKALQHKINEFKNESATKSEELLNQ---ERELFEKRREIDTLLTQASLEYEHQRESSQL 440 E K L+ ++ + + E LL + R+L ++ E+ +A L E Sbjct: 700 EVKQLRQRLQDIQQVQGRNEELLLERTVRSRQLTQQLMEMRQQQREAQLHGEQTERDIAR 759 Query: 441 LKDKQNEVKQHFQNLEYAKKELDKERNLLDQQKKVDSEAIFQLKEKVAQERKELEELYLV 500 L +Q ++ Q N + EL + LL Q ++ L++++A +++L L Sbjct: 760 LSQQQTQINQQQINQQQKLAELQQNLALLQQ-------SLPPLEQQLASAQQQLTALETS 812 Query: 501 KKQKQDQKENELLFFEKQLKQHQADFENELEAKQQELFEAKHALERSFIKLEDKEKDLNT 560 + +Q Q + Q++ +A+++ +L+A +Q ED KDL Sbjct: 813 QTHQQWQT------IQIQIRTVEAEYQRQLQALRQG---------------EDHLKDLQN 851 Query: 561 KAQQIANEFSQLKTDKSKSADFELMLQNEYENLQQEKQKLFQERTYFERNAAVLSNXXXX 620 +Q++ + +Q + ++ +L L E E L+ ++ E A LS Sbjct: 852 SSQRLEEKIAQAQEKIAQHQAQDLTLAQEQEQLKIALAEMNGAIQTTEAQLAKLSEKLGS 911 Query: 621 XXXXXXXXXXTLDQLTKSFEQERL------INQREHKELVASVEKQKEILGKKL------ 668 L+QL ++++ NQ+E++E + ++ Q E L + L Sbjct: 912 TKQERDRLETQLNQLRSQQQEQQWQWEKLQTNQQEYQENLTQLQTQLEALEQDLPDPWPE 971 Query: 669 ----QDFSQTSLNASKNLAEREMAIKFKEKEIEATEKQLLNDVNNAEVIQADLAQLNQSL 724 QD + +L+ + L E E +I+ +K +EA E + + E +A L +L++ L Sbjct: 972 IPLLQDRDEANLDFANILEELERSIRNGQKRLEAMEPVNMLALQEYEKTEARLGELSEKL 1031 Query: 725 NQERSELQNAKQRIADF 741 E RI +F Sbjct: 1032 QTIAGERTELLLRIENF 1048 Score = 63.2 bits (152), Expect = 7e-12 Identities = 125/658 (18%), Positives = 268/658 (40%), Gaps = 101/658 (15%) Query: 197 IDQLYNELDQLENQKRLLSIEYENTYRELVSADNELQNVYENIDQNQIQFKHQYQT---- 252 + Q+ E+ Q +Q++ L I+ E ++ + +L+ + Q Q +HQ Q Sbjct: 345 VGQIQAEISQ--SQQQFLHIQQEKSFHNTQTLP-QLEAAVQTSQQQLEQLRHQAQAIASA 401 Query: 253 ---YRDELSQLERKIQLTKQELVDKESALRVKIDDADFYINARLAELDDVAKQLSFQDGI 309 + E +QL R + + EL+ + S L ++++ + LAEL + ++S + Sbjct: 402 SEAWVQEQTQLSRTVNQLQDELIPQRSQL-AQLEERQQQLLTNLAELTPLLTKVSVE--- 457 Query: 310 TKQNAQHVEDKLVALNKEKDRLNTQKEAFFNLRQSALIDINKLQQENELFAKHLEHQQNE 369 +E+K A + + N Q EA + Q+ D+ +L+QE L + E Sbjct: 458 -------LEEKQFA----QGQFNFQGEALTSQIQTLASDLAQLEQERSLLQETQTRLLKE 506 Query: 370 FEQKQSDSLLKLETEYKALQHKINEFKNESATKSE--------ELLNQERELFEKRREI- 420 ++KQ L KLE +A Q + + +S+ L Q ++ EI Sbjct: 507 QQEKQR-QLDKLEAASQAQQEVQGTYATKVILQSDLPGVCGLVAQLGQVEPQYQLALEIA 565 Query: 421 -----------DTLLTQASLEYEHQRESSQ---LLKDKQNEVKQHFQNLEYAKKELDKER 466 D + A +E Q ++ + L +K K NL YA +D Sbjct: 566 AGGRLGFLVVEDDGVAAAGIEILKQAKAGRATFLPLNKIRPPKGQNPNLSYAHGYIDLAV 625 Query: 467 NLLDQQKK------------------VDSEAIFQLKEKVAQERKELEELYLVKKQKQDQK 508 NL+D ++ V++ V E LE + ++Q+ Sbjct: 626 NLIDGDRRYADIFAFIFGNTIVFDTLVNARNHLGKHRIVTLEGDLLEASGAMSGGSRNQR 685 Query: 509 E--------NELLFFEKQLKQHQADFENELEAKQQELFEAK----HALERSFIKLEDKEK 556 +E KQL+Q D + +++ + +EL + L + +++ +++ Sbjct: 686 SGLRFGTMVSEDTAEVKQLRQRLQDIQ-QVQGRNEELLLERTVRSRQLTQQLMEMRQQQR 744 Query: 557 DLNTKAQQIANEFSQLKTDKSKSADFELMLQNEYENLQQEKQKLFQERTYFERNAAVLSN 616 + +Q + ++L +++ ++ Q + LQQ L Q E+ A Sbjct: 745 EAQLHGEQTERDIARLSQQQTQINQQQINQQQKLAELQQNLALLQQSLPPLEQQLA---- 800 Query: 617 XXXXXXXXXXXXXXTLDQLTKSFEQERLINQREHKELVASVEKQKEILGKKLQDFSQTSL 676 T + +++ +Q + I Q + + + A ++Q + L ++ +D + Sbjct: 801 --------SAQQQLTALETSQTHQQWQTI-QIQIRTVEAEYQRQLQAL-RQGEDHLKDLQ 850 Query: 677 NASKNLAEREMAIKFKEKEIEATEKQLLNDVNNAEVIQADLAQLNQSLNQERSELQNAKQ 736 N+S+ L E+ I +++I + Q L E ++ LA++N ++ ++L + Sbjct: 851 NSSQRLEEK---IAQAQEKIAQHQAQDLTLAQEQEQLKIALAEMNGAIQTTEAQLAKLSE 907 Query: 737 RIADF--HNDSLK-KLNEYELSLQKRLQELQTLEANQKQHSYQNQAYFEGELDKLNRE 791 ++ D L+ +LN+ Q++ + + L+ NQ+++ +N + +L+ L ++ Sbjct: 908 KLGSTKQERDRLETQLNQLRSQQQEQQWQWEKLQTNQQEYQ-ENLTQLQTQLEALEQD 964 Score = 47.4 bits (111), Expect = 4e-07 Identities = 107/547 (19%), Positives = 209/547 (38%), Gaps = 107/547 (19%) Query: 42 QLLKEIKSLEDELKNLKGLKNQAEDNPELDKKINHLEVDLNRLVNEYKN-----FQFQKN 96 ++LK+ K+ L ++ NP L ++++ +N + + + F F Sbjct: 586 EILKQAKAGRATFLPLNKIRPPKGQNPNLSYAHGYIDLAVNLIDGDRRYADIFAFIFGNT 645 Query: 97 HMVDKVSELDNLTRFYKNELTRLQQENADFLNSKYANLANFQANYHNKLNDFHRLIENQN 156 + D + N K+ + L+ D L + A ++ N + L F ++ Sbjct: 646 IVFDTLVNARN--HLGKHRIVTLE---GDLLEASGA-MSGGSRNQRSGLR-FGTMVSEDT 698 Query: 157 QTINRLNQKINGNQNLIDNNVALLQNPNITVEKKNYLLNVIDQLYNELDQLENQKRLLSI 216 + +L Q++ Q + N LL + QL +L ++ Q+R + Sbjct: 699 AEVKQLRQRLQDIQQVQGRNEELLLERTVRSR----------QLTQQLMEMRQQQREAQL 748 Query: 217 EYENTYRELVSADNELQNVYENIDQNQIQFKHQYQTYRDELSQLERKIQLTKQELVDKES 276 E T R++ + Q Q Q Q + +L++L++ + L +Q L E Sbjct: 749 HGEQTERDIA-----------RLSQQQTQINQQQINQQQKLAELQQNLALLQQSLPPLEQ 797 Query: 277 ALRVKIDDADFYINARLAELDDVAKQLS-FQDGITKQNAQHVEDKLVALNKEKDRLNTQK 335 +L +QL+ + T Q Q ++ ++ + E R Q Sbjct: 798 ------------------QLASAQQQLTALETSQTHQQWQTIQIQIRTVEAEYQR---QL 836 Query: 336 EAFFNLRQSALIDINKLQQENELFAKHLEHQQNEFEQKQSDSLLKLETEYKALQHKINEF 395 +A LRQ + LQ ++ + + Q + Q Q+ L L E + L+ + E Sbjct: 837 QA---LRQGE-DHLKDLQNSSQRLEEKIAQAQEKIAQHQAQDLT-LAQEQEQLKIALAEM 891 Query: 396 KNESATKSEELLNQERELFEKRREIDTLLTQASLEYEHQRESSQLLKDKQNEVKQHFQNL 455 T +L +L ++E D L TQ + L+ +Q E + ++ L Sbjct: 892 NGAIQTTEAQLAKLSEKLGSTKQERDRLETQLN-----------QLRSQQQEQQWQWEKL 940 Query: 456 EYAKKELDKERNLLDQQKKVDSEAIFQLKEKVAQERKELEELYLVKKQKQDQKENELLFF 515 + ++E + NL Q ++++ L++ + E+ L QD+ E L Sbjct: 941 QTNQQEY--QENLTQLQTQLEA-----LEQDLPDPWPEIPLL-------QDRDEANL--- 983 Query: 516 EKQLKQHQADFENELEAKQQELFEAKHALER----SFIKLEDKEK------DLNTKAQQI 565 DF N LE ++ + + LE + + L++ EK +L+ K Q I Sbjct: 984 ---------DFANILEELERSIRNGQKRLEAMEPVNMLALQEYEKTEARLGELSEKLQTI 1034 Query: 566 ANEFSQL 572 A E ++L Sbjct: 1035 AGERTEL 1041 >SYNE-PCC-01-001071 sll1583 Length = 562 Score = 58.5 bits (140), Expect = 2e-10 Identities = 73/298 (24%), Positives = 125/298 (41%), Gaps = 31/298 (10%) Query: 307 DGITKQNAQHVEDKLVALNKEKDRLNTQKEAFFNLRQSALIDINKLQ---QENELFAKHL 363 DG + + H + KL L K+ + E +AL + N+L Q E L Sbjct: 63 DGESPEAVIHAKGKLRRLEKDLQSVQASLE-------NALAERNQLTENYQAQEKMVAAL 115 Query: 364 EHQQNEFEQKQSDSLLKLETEYKALQHKIN-EFKNESATKSEELLNQERELFEKRREIDT 422 +HQ ++ QS+ + L+ K+N E E+ S+ L E+ E R ++ Sbjct: 116 QHQLAHYDDIQSEKFVGLQ--------KLNQELLQENTNLSDRLKQAVNEVAETRPKLVQ 167 Query: 423 LLTQASLEYEHQRESSQLLKDKQNEVKQHFQNLEYAKK----ELDKERNLLDQQKKVDSE 478 L SL +Q+ S QL +QN+ K Q L +K ++E+ + Q E Sbjct: 168 L---NSLVTRNQQLSDQLSYVEQNQAKAIEQRLASQEKLWQQRHEQEQAQWNSQASQWEE 224 Query: 479 AIFQLKEKVAQERKELEELYLVKKQKQDQKENELLFFEKQLKQHQADFENELEAKQQELF 538 + QL + Q ++EL+ + Q Q EN ++ +Q E + + ++ +L Sbjct: 225 QVRQLTAERDQVQQELQTARQQSQSAQTQAENLQAALDRLGQQ-----EEQWQGERSQLT 279 Query: 539 EAKHALERSFIKLEDKEKDLNTKAQQIANEFSQLKTDKSKSADFELMLQNEYENLQQE 596 + LE + +L +L K + E +LKT+K + A Q + LQQE Sbjct: 280 AKLNQLEEAQKELALANAELKVKLETTQAEGDRLKTEKKEQAAALQSAQGQVTQLQQE 337 Score = 51.6 bits (122), Expect = 2e-08 Identities = 67/309 (21%), Positives = 117/309 (37%), Gaps = 45/309 (14%) Query: 73 KINHLEVDLNRLVNEYKNFQFQKNHMVDKVSELDNLTRFYKNELTR---LQQENADFLNS 129 K+ LE DL + +N ++N + + + + +++L +Q E L Sbjct: 76 KLRRLEKDLQSVQASLENALAERNQLTENYQAQEKMVAALQHQLAHYDDIQSEKFVGLQK 135 Query: 130 KYANLANFQANYHNKLNDFHRLIENQNQTINRLNQKINGNQNLIDNNVALLQNPNITVEK 189 L N ++L + + +LN + NQ L D + QN +E+ Sbjct: 136 LNQELLQENTNLSDRLKQAVNEVAETRPKLVQLNSLVTRNQQLSDQLSYVEQNQAKAIEQ 195 Query: 190 KNYLLNVIDQLYNELDQL---------ENQKRLLSIEYENTYRELVSADNELQNVYENID 240 + + Q +E +Q E Q R L+ E + +EL +A + Q+ Sbjct: 196 RLASQEKLWQQRHEQEQAQWNSQASQWEEQVRQLTAERDQVQQELQTARQQSQSA----- 250 Query: 241 QNQIQFKHQYQTYRDELSQLERKIQLTKQELVDKESALRVKIDDADFYINARLAELDDVA 300 Q Q + Q D L Q E + Q + +L A+L +L++ Sbjct: 251 QTQAE---NLQAALDRLGQQEEQWQGERSQLT------------------AKLNQLEEAQ 289 Query: 301 KQLSFQDGITKQNAQHVEDKLVALNKEKDRLNTQKEAFFNLRQSALIDINKLQQENELFA 360 K+L+ + K KL E DRL T+K+ QSA + +LQQE Sbjct: 290 KELALANAELKV-------KLETTQAEGDRLKTEKKEQAAALQSAQGQVTQLQQELAALQ 342 Query: 361 KHLEHQQNE 369 ++L + E Sbjct: 343 ENLAKAKGE 351 Score = 45.4 bits (106), Expect = 2e-06 Identities = 60/298 (20%), Positives = 134/298 (44%), Gaps = 32/298 (10%) Query: 254 RDELSQLERKIQLTKQELVDKESALRVKIDDADFY---------INARLAELDDVAKQLS 304 + +L +LE+ +Q + L E+AL + + Y + +LA DD+ + Sbjct: 74 KGKLRRLEKDLQSVQASL---ENALAERNQLTENYQAQEKMVAALQHQLAHYDDIQSEKF 130 Query: 305 FQDGITKQNAQHVEDKLVALNKEKDRLNTQKEAFFNLRQSALIDINKLQQENELFAKHLE 364 G+ K N + +++ ++ K +N E + L+ +N L N+ L Sbjct: 131 V--GLQKLNQELLQENTNLSDRLKQAVNEVAET-----RPKLVQLNSLVTRNQ----QLS 179 Query: 365 HQQNEFEQKQSDSL-LKLETEYKALQHKINEFKNESATKSEELLNQERELFEKRREIDTL 423 Q + EQ Q+ ++ +L ++ K Q + + + + +++ + Q R+L +R ++ Sbjct: 180 DQLSYVEQNQAKAIEQRLASQEKLWQQRHEQEQAQWNSQASQWEEQVRQLTAERDQVQQE 239 Query: 424 LTQASLEYEHQRESSQLLKDKQNEVKQHFQNLEYAKKELDKERNLLDQQKKVDSEAIFQL 483 L A + + + ++ L+ + + Q + + + +L + N L++ +K + A +L Sbjct: 240 LQTARQQSQSAQTQAENLQAALDRLGQQEEQWQGERSQLTAKLNQLEEAQKELALANAEL 299 Query: 484 KEKVAQERKELEELYLVKKQKQDQKENELLFFEKQLKQHQADFENELEAKQQELFEAK 541 K K+ + E + L KK++ ++ + Q+ Q + EL A Q+ L +AK Sbjct: 300 KVKLETTQAEGDRLKTEKKEQAAALQSA----QGQVTQ----LQQELAALQENLAKAK 349 Score = 43.9 bits (102), Expect = 4e-06 Identities = 53/301 (17%), Positives = 129/301 (42%), Gaps = 47/301 (15%) Query: 1215 LSDEKKALNQKLVELKNLSQTYLANKNKAEYSQQQLQQKYTNLLDLK-ENLERTKDQLDK 1273 L + +L L E L++ Y A + Q QL Y ++ K L++ +L + Sbjct: 84 LQSVQASLENALAERNQLTENYQAQEKMVAALQHQLAH-YDDIQSEKFVGLQKLNQELLQ 142 Query: 1274 KHRSIFARLTKFANDLRFEKKQLLKAQRIVDDKNRLLKENERNLHFLSNETERKRAVLED 1333 ++ ++ RL + N++ + +L++ N L+ N++ L D Sbjct: 143 ENTNLSDRLKQAVNEVAETRPKLVQL-------NSLVTRNQQ---------------LSD 180 Query: 1334 QISYFEKQRKQATDAILASHKEVKKKEGELQKLLVELETRKTKLNNDFAKFSRQREEFEN 1393 Q+SY E+ + +A + LAS +++ ++ E ++ A+++ Q ++E Sbjct: 181 QLSYVEQNQAKAIEQRLASQEKLWQQRHEQEQ----------------AQWNSQASQWEE 224 Query: 1394 QRXXXXXXXXXXXXXXNSNNFKTKAIQEIENSYKRGMEELNFQKKEFDKNKSRLYEYFRK 1453 Q + ++++ Q + + ++ L Q++++ +S+L + Sbjct: 225 QVRQLTAERDQVQQELQTARQQSQSAQTQAENLQAALDRLGQQEEQWQGERSQLTAKLNQ 284 Query: 1454 MRD---EIERKESQVKLVLKETQRKANLLEA----QANKLNIEKNTIDFKEKELKAFKDK 1506 + + E+ +++K+ L+ TQ + + L+ QA L + + ++EL A ++ Sbjct: 285 LEEAQKELALANAELKVKLETTQAEGDRLKTEKKEQAAALQSAQGQVTQLQQELAALQEN 344 Query: 1507 V 1507 + Sbjct: 345 L 345 >SCER-S28-01-001667 ORFP:YER008C SEC3, Chr V from 167807-171817, reverse complement Length = 1336 Score = 55.5 bits (132), Expect = 1e-09 Identities = 47/211 (22%), Positives = 100/211 (47%), Gaps = 10/211 (4%) Query: 372 QKQSDSLLKLETEYKALQHKINEFKNESATKSEELLNQERELFEKRREIDTLLTQASLEY 431 + +++S+ + T H + N++ S LN+ KR E++ Q E Sbjct: 287 RSETESVNPVSTPASVEYHAGMKSLNKAPYSSNSTLNE----VNKRYELEQQQQQEEAEL 342 Query: 432 EHQRESSQLLKDKQNEVKQHFQNLEYAKKELDKERNLLDQQKKVDSEAIFQLKEKVAQER 491 E +L K+NE+K+ + K+E K + L+ Q++++ E + E A+++ Sbjct: 343 RRLEEQKRLQLQKENEMKR-LEEERRIKQEERKRQMELEHQRQLEEEERKRQMELEAKKQ 401 Query: 492 KELEELYLVKKQKQDQKENELLFFEKQLKQHQADFENELEAKQQELFEAKHALERSFIKL 551 EL+ +++++ +KE ELL E Q KQ + + L+ ++QE K E+S Sbjct: 402 MELKRQRQFEEEQRLKKERELL--EIQRKQREQETAERLKKEEQEALAKKEEEEKSKRNK 459 Query: 552 EDKE---KDLNTKAQQIANEFSQLKTDKSKS 579 D E +++N K + + + + +++++ Sbjct: 460 VDNESYTQEINGKVDNLLEDLNAVLAEETET 490 Score = 48.5 bits (114), Expect = 2e-07 Identities = 122/598 (20%), Positives = 233/598 (38%), Gaps = 62/598 (10%) Query: 324 LNKEKDRLNTQKEAFFNLRQSALIDINKLQQENELFAKHLEHQQNEFEQKQSDSLLKLET 383 +NK + Q++ LR+ +LQ+ENE+ K LE ++ +Q++ ++LE Sbjct: 325 VNKRYELEQQQQQEEAELRRLEEQKRLQLQKENEM--KRLE-EERRIKQEERKRQMELEH 381 Query: 384 EYKALQHKINEFKNESATKSEELLNQERELFEKRREIDTLLTQASLEYEHQRESSQLLKD 443 + + + + A K EL Q + E+R + + L + + Q + +L K+ Sbjct: 382 QRQLEEEERKRQMELEAKKQMELKRQRQFEEEQRLKKERELLEIQRKQREQETAERLKKE 441 Query: 444 KQNEVKQHFQNLEYAKKELDKERNLLDQQKKVDSEAIFQ-LKEKVAQERKELEELYLVKK 502 +Q + AKKE +++ ++ KVD+E+ Q + KV ++L + + Sbjct: 442 EQEAL---------AKKEEEEK----SKRNKVDNESYTQEINGKVDNLLEDLNAVLAEET 488 Query: 503 QKQDQKENELLFFEKQLKQHQADFENELEAKQQELFEAKHALERSFIKLEDKEKDLNTKA 562 + +N E+ + + L + E I L D+ LNT Sbjct: 489 ETTPTMQNGTYVPERSTARAHDQLKKPLNIAKVESLGGSDL--NDSISLSDEIAGLNT-- 544 Query: 563 QQIANEFSQLKTDKSKSADFELMLQNEYENLQQEKQKLFQERTYFERNAAVLS------- 615 ++ E K D S E+ N +E E ++ E + + A +S Sbjct: 545 SNLSGEDQDEKNDLSFEKGDEVRYSNNFEG---EAPHVYHEVSIIQEEAPAVSQKLILPE 601 Query: 616 -NXXXXXXXXXXXXXXTLDQLTKSFEQERL--INQREHKELVASVEKQKEILGKKLQDFS 672 N T++ + E L IN + + +E+ L + F+ Sbjct: 602 ENNESEALIESKEEIKTMENIDDEVLLEILTDINWSIEDDADSMIERIDLRLAETEYLFN 661 Query: 673 QTSLNASK---NLAEREMAIKFKEKEIEATEKQLLNDVNNAEVIQADLAQLNQSLNQERS 729 Q L+ K N+ E + + I T L +++N D+ + N + Sbjct: 662 QNLLSLQKIGPNIRPYEDKVNDECHRIIPTLSLFLMEMSN---FSNDIENVESQDNGLQV 718 Query: 730 ELQNAKQRIADFHNDSLKKLNEYELSLQKRLQELQTLEANQKQHSYQNQAYFEGELDKLN 789 E N K+ + + ++ LK ++ E+SL Q LE ++ +N + E +L+ L Sbjct: 719 ESAN-KKLLWNTLDELLKTVSLDEISLN------QLLECPIRE---KNLPWMENQLNLLL 768 Query: 790 REKQAF---LNLRKKQTMEVDAIKQRLSDKHQA----LNMQQAELDRKTHELNNAFLNHD 842 + QA N + E+ +KQRL + LN E+ +K + ++HD Sbjct: 769 KAFQAIGSDGNEVEYNLREISGLKQRLQFYEKVTKIFLNRIVEEMQKKFSNIRGQDISHD 828 Query: 843 ADQKSLQDQL---ATVKETQKLIDLERSALLEKQREFAENVAGFKRHWSNKTSQLQKI 897 + L L + +++ A++E + V + W+ K SQLQ I Sbjct: 829 QMIRILTTLLIFSPLILFCKEISQKSYQAIVENWNVSIQPV--YMELWTKKISQLQGI 884 Score = 47.8 bits (112), Expect = 3e-07 Identities = 70/307 (22%), Positives = 131/307 (42%), Gaps = 28/307 (9%) Query: 1083 QSNVELERKREKLATDFTNLNKVQHNTQINRDQLNSQIRQFLLERKNF-----QRFSNEA 1137 Q EL R E+ N+++ + R + + RQ LE + ++ E Sbjct: 337 QEEAELRRLEEQKRLQLQKENEMKRLEEERRIKQEERKRQMELEHQRQLEEEERKRQMEL 396 Query: 1138 NAKKAFLIKRLRSF--ASNLKLQKEALAIQKLEFDKRD-EQQKKELQQATLQLEQFKFEK 1194 AKK +KR R F LK ++E L IQ+ + ++ E+ KKE Q+A + E+ + K Sbjct: 397 EAKKQMELKRQRQFEEEQRLKKERELLEIQRKQREQETAERLKKEEQEALAKKEEEEKSK 456 Query: 1195 QNFDIEKQRQLVAIKTQCEKLSDEKKALNQKLVELKNLSQ--TYLANKNKAEYSQQQLQQ 1252 +N ++ + I + + L ++ A+ + E Q TY+ ++ A + QL++ Sbjct: 457 RN-KVDNESYTQEINGKVDNLLEDLNAVLAEETETTPTMQNGTYVPERSTAR-AHDQLKK 514 Query: 1253 -----KYTNL--LDLKENLERTKDQLDKKHRSIFARLTKFANDLRFEKKQLLKAQRIVDD 1305 K +L DL +++ + + ++ NDL FEK ++ Sbjct: 515 PLNIAKVESLGGSDLNDSISLSDEIAGLNTSNLSGEDQDEKNDLSFEKGDEVRY------ 568 Query: 1306 KNRLLKENERNLHFLSNETERKRAVLEDQISYFEKQRKQATDAILASHKEVKKKEGELQK 1365 N E H +S E AV + I + ++A++ S +E+K E + Sbjct: 569 SNNFEGEAPHVYHEVSIIQEEAPAVSQKLIL---PEENNESEALIESKEEIKTMENIDDE 625 Query: 1366 LLVELET 1372 +L+E+ T Sbjct: 626 VLLEILT 632 Score = 44.3 bits (103), Expect = 3e-06 Identities = 32/147 (21%), Positives = 78/147 (53%), Gaps = 8/147 (5%) Query: 920 SDLQKDYQVFELQKDQEFRQIEAKQRELDKLAEKNNQVKLELDNRFQALQNQKQDTVQAQ 979 +++ K Y++ + Q+ +E ++++ +L ++N +LE + R + + ++Q ++ Q Sbjct: 323 NEVNKRYELEQQQQQEEAELRRLEEQKRLQLQKENEMKRLEEERRIKQEERKRQMELEHQ 382 Query: 980 LELEREQHQLNLEQTAFNQ---ANESLLKQREQLTKKIQAFHYELKKRNQFLALKGKRLF 1036 +LE E+ + +E A Q + ++ ++L K+ + + K+R Q A +RL Sbjct: 383 RQLEEEERKRQMELEAKKQMELKRQRQFEEEQRLKKERELLEIQRKQREQETA---ERLK 439 Query: 1037 AKEQD--QQRKDQEINWRFKQFEKEYT 1061 +EQ+ +++++E + R K + YT Sbjct: 440 KEEQEALAKKEEEEKSKRNKVDNESYT 466 >SYNE-PCC-01-000943 sll1424 Length = 491 Score = 44.3 bits (103), Expect = 3e-06 Identities = 52/248 (20%), Positives = 109/248 (43%), Gaps = 44/248 (17%) Query: 295 ELDDVAKQLSFQDGITKQNAQ---HVEDKLVALNKEKDRLNTQKEAFFNLRQSALIDINK 351 +LDD+ QL +Q +Q +E +L A+ +E+ + + AL + + Sbjct: 77 QLDDILAQLRVAKTELEQASQAKEEIESELTAVREEQQLVQERSRELNRNYTKALQLLRR 136 Query: 352 LQQENELFAKHLEHQQNEFEQ--KQSDSLLKLETEYKALQHKINEFKNESATKSEELLNQ 409 + +++ + + + E Q +Q DSLL +E LQ ++ E + + E + Q Sbjct: 137 VSEQSRNLRQEVANLSAERAQLNEQKDSLLAESSE---LQSQVKLRDQELSKRQERIAQQ 193 Query: 410 ERELFEKRREIDTLLTQASLEYEHQRESSQLLKDKQNEVKQHFQNLEYAKKELDKERNLL 469 E+ L QRE Q L ++ F +LE +++L E N Sbjct: 194 EKVL------------------ARQREQVQSL-------EKRFASLEAQRQQLQAEINQR 228 Query: 470 DQQKKVDSEAIFQLKEKVAQERKELEELYLVKKQKQDQKENELLFFEKQLKQHQADFENE 529 D K+D QL + +A + +++ +++K E EL F ++++++ + +++ Sbjct: 229 D--TKID-----QLDQAIAAKDNDIQ----AREEKLQGLETELSFLQREVEELERYYQDY 277 Query: 530 LEAKQQEL 537 E + Q++ Sbjct: 278 QELRGQQI 285 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.311 0.128 0.332 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 190,208 Number of Sequences: 78 Number of extensions: 11535 Number of successful extensions: 671 Number of sequences better than 1.0e-05: 10 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 120 Number of HSP's gapped (non-prelim): 93 length of query: 1805 length of database: 48,235 effective HSP length: 76 effective length of query: 1729 effective length of database: 42,307 effective search space: 73148803 effective search space used: 73148803 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 99 (42.7 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MGEN-G37-01-000317 MG312 cytadherence accessory protein (hmw1) (1139 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value MGEN-G37-01-000317 MG312 cytadherence accessory protein (hmw1) 2171 0.0 SCER-S28-01-000806 ORFP:YDL058W USO1, Chr IV from 345664-351036 56 5e-10 >MGEN-G37-01-000317 MG312 cytadherence accessory protein (hmw1) Length = 1139 Score = 2171 bits (5626), Expect = 0.0 Identities = 1080/1139 (94%), Positives = 1080/1139 (94%) Query: 1 MAKNKQSVFEEKNYTQTEPENIFGDLYDGKSTVEEDPNIKVAYDADGNGYYIAFNKETGV 60 MAKNKQSVFEEKNYTQTEPENIFGDLYDGKSTVEEDPNIKVAYDADGNGYYIAFNKETGV Sbjct: 1 MAKNKQSVFEEKNYTQTEPENIFGDLYDGKSTVEEDPNIKVAYDADGNGYYIAFNKETGV 60 Query: 61 YYDPYGDTEYDISQLFDENGNPFVFDEKQEENDYLKYVGNPDYGSYDENGEWVWSGYFEN 120 YYDPYGDTEYDISQLFDENGNPFVFDEKQEENDYLKYVGNPDYGSYDENGEWVWSGYFEN Sbjct: 61 YYDPYGDTEYDISQLFDENGNPFVFDEKQEENDYLKYVGNPDYGSYDENGEWVWSGYFEN 120 Query: 121 DQWISTKESQPTDENYGFDSDLPPEVKQPESVEDNYGFDNDLPPEVKQPESVEDNYGFDN 180 DQWISTKESQPTDENYGFDSDLPPEVKQPESVEDNYGFDNDLPPEVKQPESVEDNYGFDN Sbjct: 121 DQWISTKESQPTDENYGFDSDLPPEVKQPESVEDNYGFDNDLPPEVKQPESVEDNYGFDN 180 Query: 181 DLPPEVKQPESVVDQPSSDDYFAKQPTDENYGFDNDLPPEVKQPESVVDQPSSDDHFAKQ 240 DLPPEVKQPESVVDQPSSDDYFAKQPTDENYGFDNDLPPEVKQPESVVDQPSSDDHFAKQ Sbjct: 181 DLPPEVKQPESVVDQPSSDDYFAKQPTDENYGFDNDLPPEVKQPESVVDQPSSDDHFAKQ 240 Query: 241 PESTTDSYSFDSDLPQPTLDQPSLDDHVQYNFDHHEELKPVAEEQNNYQVGFDQVQANLD 300 PESTTDSYSFDSDLPQPTLDQPSLDDHVQYNFDHHEELKPVAEEQNNYQVGFDQVQANLD Sbjct: 241 PESTTDSYSFDSDLPQPTLDQPSLDDHVQYNFDHHEELKPVAEEQNNYQVGFDQVQANLD 300 Query: 301 NNEEIQPTAEKKVTTDFESKQAQVVDSYQLPIDTDQQDQTTFSSSFETQPTVEQFDQVNS 360 NNEEIQPTAEKKVTTDFESKQAQVVDSYQLPIDTDQQDQTTFSSSFETQPTVEQFDQVNS Sbjct: 301 NNEEIQPTAEKKVTTDFESKQAQVVDSYQLPIDTDQQDQTTFSSSFETQPTVEQFDQVNS 360 Query: 361 EVNDQFKPEITKEPVLESSFNKQDVVETXXXXXXXXXXXXXXKDATNNDSLNSEFIQLNS 420 EVNDQFKPEITKEPVLESSFNKQDVVET KDATNNDSLNSEFIQLNS Sbjct: 361 EVNDQFKPEITKEPVLESSFNKQDVVETSDLNSESNLYSENNKDATNNDSLNSEFIQLNS 420 Query: 421 NSETASDDVHYESKSEPIHDYKFGXXXXXXXXXXXXXXXPVKFNSETAPDAHFESQSEPV 480 NSETASDDVHYESKSEPIHDYKFG PVKFNSETAPDAHFESQSEPV Sbjct: 421 NSETASDDVHYESKSEPIHDYKFGSDLSQSNSNNSLESEPVKFNSETAPDAHFESQSEPV 480 Query: 481 DQVQYDIYQNEELKPTLDQPSSDDYFAKQPTDENYGFDNDLPPEVKQPESVVDQPSSDDH 540 DQVQYDIYQNEELKPTLDQPSSDDYFAKQPTDENYGFDNDLPPEVKQPESVVDQPSSDDH Sbjct: 481 DQVQYDIYQNEELKPTLDQPSSDDYFAKQPTDENYGFDNDLPPEVKQPESVVDQPSSDDH 540 Query: 541 FAKQPESTTDSYSFDSDLPQPTLDQPSLDDHVQYNFDHHEELKPVAEEQNNYQVGFDQVQ 600 FAKQPESTTDSYSFDSDLPQPTLDQPSLDDHVQYNFDHHEELKPVAEEQNNYQVGFDQVQ Sbjct: 541 FAKQPESTTDSYSFDSDLPQPTLDQPSLDDHVQYNFDHHEELKPVAEEQNNYQVGFDQVQ 600 Query: 601 ANLDNNEEIQPTAEKEVTTDFESKQAQVVDSYQLPIDTDQQDQTTFSSSFETQPTVEQFD 660 ANLDNNEEIQPTAEKEVTTDFESKQAQVVDSYQLPIDTDQQDQTTFSSSFETQPTVEQFD Sbjct: 601 ANLDNNEEIQPTAEKEVTTDFESKQAQVVDSYQLPIDTDQQDQTTFSSSFETQPTVEQFD 660 Query: 661 QVNSEVNDQFKPEITKEPVLESSFNKQDVVETSNYTNNLQKFDIQSDNKITITTKKSSPQ 720 QVNSEVNDQFKPEITKEPVLESSFNKQDVVETSNYTNNLQKFDIQSDNKITITTKKSSPQ Sbjct: 661 QVNSEVNDQFKPEITKEPVLESSFNKQDVVETSNYTNNLQKFDIQSDNKITITTKKSSPQ 720 Query: 721 IPTTLPISFVSNRIEYKPVETLALDNKESQQEQITINSITEDSKTLAKTXXXXXXXXXXX 780 IPTTLPISFVSNRIEYKPVETLALDNKESQQEQITINSITEDSKTLAKT Sbjct: 721 IPTTLPISFVSNRIEYKPVETLALDNKESQQEQITINSITEDSKTLAKTLSVQLQQINSL 780 Query: 781 XXXXXXTSESVRLDKKDDQLTINTVNSEDQQPKIEVFVKAKEPVEEHSITQNKQSVEDKS 840 TSESVRLDKKDDQLTINTVNSEDQQPKIEVFVKAKEPVEEHSITQNKQSVEDKS Sbjct: 781 NNQSIVTSESVRLDKKDDQLTINTVNSEDQQPKIEVFVKAKEPVEEHSITQNKQSVEDKS 840 Query: 841 ELDNFNKKSDLYKIISELKRGELNPTINFDAIFQMNDYQMSVKQSFIHLNDFVTNYKNQI 900 ELDNFNKKSDLYKIISELKRGELNPTINFDAIFQMNDYQMSVKQSFIHLNDFVTNYKNQI Sbjct: 841 ELDNFNKKSDLYKIISELKRGELNPTINFDAIFQMNDYQMSVKQSFIHLNDFVTNYKNQI 900 Query: 901 SERYLIIKKELQSELSRLIDQNENLNVQFNNAKNLTTLQKEEMIRSLASDFAIAYKPSNS 960 SERYLIIKKELQSELSRLIDQNENLNVQFNNAKNLTTLQKEEMIRSLASDFAIAYKPSNS Sbjct: 901 SERYLIIKKELQSELSRLIDQNENLNVQFNNAKNLTTLQKEEMIRSLASDFAIAYKPSNS 960 Query: 961 YEQLQKSGEIMRHVQRAITENEKKIESIQGSLKQLKTVYNSCCETIMNNINKLDNTLRFA 1020 YEQLQKSGEIMRHVQRAITENEKKIESIQGSLKQLKTVYNSCCETIMNNINKLDNTLRFA Sbjct: 961 YEQLQKSGEIMRHVQRAITENEKKIESIQGSLKQLKTVYNSCCETIMNNINKLDNTLRFA 1020 Query: 1021 KKEKDPLLLSNFDSVTDNGLVEPNQLMDDLIDFSNTFDNISNEQLDDFIYENMDRNIDFE 1080 KKEKDPLLLSNFDSVTDNGLVEPNQLMDDLIDFSNTFDNISNEQLDDFIYENMDRNIDFE Sbjct: 1021 KKEKDPLLLSNFDSVTDNGLVEPNQLMDDLIDFSNTFDNISNEQLDDFIYENMDRNIDFE 1080 Query: 1081 FEGFNNDFVDIDAKVMDSMSAFSVNDLDIETLVPDRTSNXXXXXXXXXXXXXGDFSLDY 1139 FEGFNNDFVDIDAKVMDSMSAFSVNDLDIETLVPDRTSN GDFSLDY Sbjct: 1081 FEGFNNDFVDIDAKVMDSMSAFSVNDLDIETLVPDRTSNFSSLLDEDLFESSGDFSLDY 1139 >SCER-S28-01-000806 ORFP:YDL058W USO1, Chr IV from 345664-351036 Length = 1790 Score = 56.2 bits (134), Expect = 5e-10 Identities = 170/853 (19%), Positives = 317/853 (37%), Gaps = 103/853 (12%) Query: 240 QPESTTDSYSFDSDLPQPTLDQPSLDDHVQYNFDHHEELKPVAEEQNNYQVGFDQVQANL 299 Q E+ + + L T + LD+ Q H LK E + + V+ +L Sbjct: 750 QTETESTHENLTEKLIALTNEHKELDEKYQILNSSHSSLK---ENFSILETELKNVRDSL 806 Query: 300 DNNEEIQPTAEKKVTTDFESKQAQVVDSYQLPIDTDQQDQTTFSSSFET--QPTVEQFDQ 357 D +++ E K D E++ A + Y+ I + T ET + D Sbjct: 807 DEMTQLRDVLETK---DKENQTALL--EYKSTIHKQEDSIKTLEKGLETILSQKKKAEDG 861 Query: 358 VNSEVNDQFKPEITKEPVLESSFNKQ---DVVETXXXXXXXXXXXXXXKDATNNDSLNSE 414 +N D F + V E+ N Q D T ++N Sbjct: 862 INKMGKDLFALSREMQAVEENCKNLQKEKDKSNVNHQKETKSLKEDIAAKITEIKAINEN 921 Query: 415 FIQLNSNSETASDDVHYESKSEPIHDYKFGXXXXXXXXXXXXXXXPVKFNSETAPDAHFE 474 ++ S + + SK + +YK N+ A E Sbjct: 922 LEEMKIQCNNLSKEKEHISKE--LVEYKSRFQSHDNLVAKLTEKLKSLANNYKDMQAENE 979 Query: 475 SQSEPVDQVQYDI-YQNEELKPTLDQPSSDDYFAKQPTDENYGFDN-DLPPEVKQ-PESV 531 S + V++ + + Q L+ +D S + EN+ + + ++Q +++ Sbjct: 980 SLIKAVEESKNESSIQLSNLQNKIDSMSQEK--------ENFQIERGSIEKNIEQLKKTI 1031 Query: 532 VDQPSSDDHFAKQPESTTDSYSFDSDLPQPTLDQPSLDDHVQYNFDHHEELKPVAEEQNN 591 D + + + +S+ D Y L + L+ + + N + EL EE Sbjct: 1032 SDLEQTKEEIISKSDSSKDEYESQISLLKEKLETATTAN--DENVNKISELTKTREELEA 1089 Query: 592 YQVGFDQVQANLDNNEEIQPTAEKEVTTDFESKQAQVVDSYQLPIDTDQQ---------- 641 + ++ L+ E A KEV + E + + + + +T QQ Sbjct: 1090 ELAAYKNLKNELETKLETSEKALKEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLES 1149 Query: 642 ------DQTTFSSSFETQPTVEQFDQVNSEVNDQFKPEITK-EPVLESSFNKQDVVE--- 691 D +E Q ++ Q N E++ Q EIT + ES K D +E Sbjct: 1150 LEKEHEDLAAQLKKYEEQIANKE-RQYNEEIS-QLNDEITSTQQENESIKKKNDELEGEV 1207 Query: 692 -----TSNYTNNLQKFDIQSDN-KITITTKKSSPQIPT-----------TLPISFVSNRI 734 TS +NL+K +I + N +I KK+ + T+ I + + Sbjct: 1208 KAMKSTSEEQSNLKKSEIDALNLQIKELKKKNETNEASLLESIKSVESETVKIKELQDEC 1267 Query: 735 EYKPVETLALDNK--ESQQEQITINSITEDSKTL-----AKTXXXXXXXXXXXXXXXXXT 787 +K E L++K S+ + + ++S+ + AKT Sbjct: 1268 NFKEKEVSELEDKLKASEDKNSKYLELQKESEKIKEELDAKTTELKIQLEKITNLSKAKE 1327 Query: 788 SESVRLDKKDDQLTINTVNSEDQQPKI--EVFVKAKEPVEEHSITQNKQSVEDKSELDNF 845 L + + N+E+Q K+ E+ +K + +E + S + + Sbjct: 1328 KSESELSRLKKTSSEERKNAEEQLEKLKNEIQIKNQAFEKERKLLNEGSSTITQEYSEKI 1387 Query: 846 NKKSD-LYKIISE--LKRGELNPTIN-FDAIFQMNDYQMSVKQSFIH-LNDFVTNYKNQI 900 N D L ++ +E LK E++ T + + + ND + KQ+ I L D + +YK++I Sbjct: 1388 NTLEDELIRLQNENELKAKEIDNTRSELEKVSLSNDELLEEKQNTIKSLQDEILSYKDKI 1447 Query: 901 S---ERYLIIKKELQSELSRLIDQNENLNVQFNNAKNLTTLQKEEMIRSLASDFAIAYKP 957 + E+ L I+++ + +L E+L Q A+ + + EE ++ L + Sbjct: 1448 TRNDEKLLSIERDNKRDL-------ESLKEQLRAAQE-SKAKVEEGLKKLEEE------S 1493 Query: 958 SNSYEQLQKSGEIMRHVQRAITENEKKI----ESIQGSLKQLKTVYNSCCETIMN-NINK 1012 S +L+KS E+M+ ++ I NE ++ E+I+ S ++L+ S E I N K Sbjct: 1494 SKEKAELEKSKEMMKKLESTIESNETELKSSMETIRKSDEKLEQSKKSAEEDIKNLQHEK 1553 Query: 1013 LDNTLRFAKKEKD 1025 D R + EKD Sbjct: 1554 SDLISRINESEKD 1566 Score = 50.4 bits (119), Expect = 3e-08 Identities = 113/579 (19%), Positives = 218/579 (37%), Gaps = 86/579 (14%) Query: 544 QPESTTDSYSFDSDLPQPTLDQPSLDDHVQYNFDHHEELKPVAEEQNNYQVGFDQVQANL 603 Q E+ + + L T + LD+ Q H LK E + + V+ +L Sbjct: 750 QTETESTHENLTEKLIALTNEHKELDEKYQILNSSHSSLK---ENFSILETELKNVRDSL 806 Query: 604 DNNEEIQPTAEKEVTTDFESKQAQVVDSYQLPIDTDQQDQTTFSSSFET--QPTVEQFDQ 661 D +++ E T D E++ A + Y+ I + T ET + D Sbjct: 807 DEMTQLRDVLE---TKDKENQTALL--EYKSTIHKQEDSIKTLEKGLETILSQKKKAEDG 861 Query: 662 VNSEVNDQFKPEITKEPVLESSFNKQDVVETSNYTNNLQKFDIQSDNKITITTKKSSPQI 721 +N D F + V E+ N Q + SN + + ++ D IT K+ + Sbjct: 862 INKMGKDLFALSREMQAVEENCKNLQKEKDKSNVNHQKETKSLKEDIAAKITEIKAINEN 921 Query: 722 PTTLPIS----------FVSNRIEYKP---------------VETLALDNKESQQEQITI 756 + I +EYK +++LA + K+ Q E ++ Sbjct: 922 LEEMKIQCNNLSKEKEHISKELVEYKSRFQSHDNLVAKLTEKLKSLANNYKDMQAENESL 981 Query: 757 NSITEDSKTLAKTXXXXXXXXXXXXXXXXXTSESVR--LDKKDDQLTINTVNSEDQQPKI 814 E+SK + + R ++K +QL T+ S+ +Q K Sbjct: 982 IKAVEESKNESSIQLSNLQNKIDSMSQEKENFQIERGSIEKNIEQLK-KTI-SDLEQTKE 1039 Query: 815 EVFVKAKEPVEEH----SITQNKQSVEDKSELDNFNKKSDLYKIISELK---------RG 861 E+ K+ +E+ S+ + K + +N NK S+L K EL+ + Sbjct: 1040 EIISKSDSSKDEYESQISLLKEKLETATTANDENVNKISELTKTREELEAELAAYKNLKN 1099 Query: 862 ELNPTINFD--AIFQMNDYQMSVKQSFIHLNDFVTNYKNQISERYLIIKKELQSELSRLI 919 EL + A+ ++ + + +K+ I L T K Q++ L++ L L Sbjct: 1100 ELETKLETSEKALKEVKENEEHLKEEKIQLEKEATETKQQLNS--------LRANLESLE 1151 Query: 920 DQNENLNVQFNNAKNLTTLQKEEMIRSLASDFAIAYKPSNSYEQLQKSGEIMRHVQRAIT 979 ++E+L Q L+K E IA K E++ + + + Q+ Sbjct: 1152 KEHEDLAAQ---------LKKYEE--------QIANKERQYNEEISQLNDEITSTQQENE 1194 Query: 980 ENEKKIESIQGSLKQLKTVYNSCCETIMNNINKLDNTLRFAKKEKDPLLLSNFDSV--TD 1037 +KK + ++G +K +K+ + I+ L+ ++ KK+ + S +S+ + Sbjct: 1195 SIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDALNLQIKELKKKNETNEASLLESIKSVE 1254 Query: 1038 NGLVEPNQLMDDLIDFSNTFDNISNEQLDDFIYENMDRN 1076 + V+ +L D+ F +L+D + + D+N Sbjct: 1255 SETVKIKELQDEC-----NFKEKEVSELEDKLKASEDKN 1288 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.307 0.128 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 133,317 Number of Sequences: 78 Number of extensions: 7477 Number of successful extensions: 125 Number of sequences better than 1.0e-05: 2 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 34 Number of HSP's gapped (non-prelim): 11 length of query: 1139 length of database: 48,235 effective HSP length: 73 effective length of query: 1066 effective length of database: 42,541 effective search space: 45348706 effective search space used: 45348706 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits) S2: 98 (42.4 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MGEN-G37-01-000335 MG328 conserved hypothetical protein (756 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value MGEN-G37-01-000335 MG328 conserved hypothetical protein 1415 0.0 MPNE-M12-01-000474 gi|13508213|ref|NP_110162.1| coiled coil pro... 206 2e-55 SCER-S28-01-000806 ORFP:YDL058W USO1, Chr IV from 345664-351036 100 3e-23 MGEN-G37-01-000221 MG218 cytadherence accessory protein (hmw2) 87 2e-19 SCER-S28-01-001306 ORFP:YDR285W ZIP1, Chr IV from 1032427-1035054 76 3e-16 SCER-S28-01-002651 ORFP:YHR023W MYO1, Chr VIII from 151657-157443 70 3e-14 SYNE-PCC-01-000727 sll1120 46 5e-07 SYNE-PCC-01-000943 sll1424 44 2e-06 MJAN-DSM-01-001277 MJ1254 hypothetical protein 42 5e-06 >MGEN-G37-01-000335 MG328 conserved hypothetical protein Length = 756 Score = 1415 bits (3662), Expect = 0.0 Identities = 729/756 (96%), Positives = 729/756 (96%) Query: 1 MAVDKELEISDFDNELDEKTLLKELVQRTNNILFSPSKITAIPFERNLLEKTFFGTVDEA 60 MAVDKELEISDFDNELDEKTLLKELVQRTNNILFSPSKITAIPFERNLLEKTFFGTVDEA Sbjct: 1 MAVDKELEISDFDNELDEKTLLKELVQRTNNILFSPSKITAIPFERNLLEKTFFGTVDEA 60 Query: 61 EKEKSIVSFFNWMIDLKVLDKKWDKNVLNHYANQLKTREEEQQTVDQTMAFQEVDDQSVL 120 EKEKSIVSFFNWMIDLKVLDKKWDKNVLNHYANQLKTREEEQQTVDQTMAFQEVDDQSVL Sbjct: 61 EKEKSIVSFFNWMIDLKVLDKKWDKNVLNHYANQLKTREEEQQTVDQTMAFQEVDDQSVL 120 Query: 121 TKEIKTGFQELKPSVITAEDDKDEIKPEATKQVSFEELFNQPSEEINETKKPEVQIFSTD 180 TKEIKTGFQELKPSVITAEDDKDEIKPEATKQVSFEELFNQPSEEINETKKPEVQIFSTD Sbjct: 121 TKEIKTGFQELKPSVITAEDDKDEIKPEATKQVSFEELFNQPSEEINETKKPEVQIFSTD 180 Query: 181 KVKEPEQFDDFYSIENLTKAINPVHKTIQYDQNDDQPFVVKRILKEQHPTKKVDELDDYN 240 KVKEPEQFDDFYSIENLTKAINPVHKTIQYDQNDDQPFVVKRILKEQHPTKKVDELDDYN Sbjct: 181 KVKEPEQFDDFYSIENLTKAINPVHKTIQYDQNDDQPFVVKRILKEQHPTKKVDELDDYN 240 Query: 241 NKELLLENADLKKQIDDLKENNNDQIFDLEQEIDDLKRRLSEEKSKHLHTKKLQDDLLQE 300 NKELLLENADLKKQIDDLKENNNDQIFDLEQEIDDLKRRLSEEKSKHLHTKKLQDDLLQE Sbjct: 241 NKELLLENADLKKQIDDLKENNNDQIFDLEQEIDDLKRRLSEEKSKHLHTKKLQDDLLQE 300 Query: 301 NRDLYEQLQNKPVAINPLSDEVNEELENLKQEKALLSDQLDALKNKSSNVQQQLALLPVX 360 NRDLYEQLQNKPVAINPLSDEVNEELENLKQEKALLSDQLDALKNKSSNVQQQLALLPV Sbjct: 301 NRDLYEQLQNKPVAINPLSDEVNEELENLKQEKALLSDQLDALKNKSSNVQQQLALLPVL 360 Query: 361 XXXXXXXXXXXXTAREANQRLDLVEQENDFLKNELKKLHDNTSNDENEKYDDLLNQYELL 420 TAREANQRLDLVEQENDFLKNELKKLHDNTSNDENEKYDDLLNQYELL Sbjct: 361 NNQINELQNQLLTAREANQRLDLVEQENDFLKNELKKLHDNTSNDENEKYDDLLNQYELL 420 Query: 421 FDENETKFDKLQVKQQALNLDYQKTISALKHENDVLLDEIEWTRSKDNDFNNTKNSFEEQ 480 FDENETKFDKLQVKQQALNLDYQKTISALKHENDVLLDEIEWTRSKDNDFNNTKNSFEEQ Sbjct: 421 FDENETKFDKLQVKQQALNLDYQKTISALKHENDVLLDEIEWTRSKDNDFNNTKNSFEEQ 480 Query: 481 KKALDEKLNGLTIQNQQLQDKIAELEEWNEEKSXXXXXXXXXXXXXXKDSQNLFNVAQDK 540 KKALDEKLNGLTIQNQQLQDKIAELEEWNEEKS KDSQNLFNVAQDK Sbjct: 481 KKALDEKLNGLTIQNQQLQDKIAELEEWNEEKSNLNTNQLVNLQQQLKDSQNLFNVAQDK 540 Query: 541 LATLEEVNLALNEKINDLEDELSGSENSNNLLAKLQADHEILQESYGKLKTDFEKLKKNK 600 LATLEEVNLALNEKINDLEDELSGSENSNNLLAKLQADHEILQESYGKLKTDFEKLKKNK Sbjct: 541 LATLEEVNLALNEKINDLEDELSGSENSNNLLAKLQADHEILQESYGKLKTDFEKLKKNK 600 Query: 601 LNDANEQYQDLLSAFEETNSELEKAKQSLSASDSENNQLKQQINSLENAKKELQFTPVTS 660 LNDANEQYQDLLSAFEETNSELEKAKQSLSASDSENNQLKQQINSLENAKKELQFTPVTS Sbjct: 601 LNDANEQYQDLLSAFEETNSELEKAKQSLSASDSENNQLKQQINSLENAKKELQFTPVTS 660 Query: 661 DEHLDELETLKIEKEQLFLENQALQNQLQYFNDISANQTEEIKEASDEDKPVEIKKPRIK 720 DEHLDELETLKIEKEQLFLENQALQNQLQYFNDISANQTEEIKEASDEDKPVEIKKPRIK Sbjct: 661 DEHLDELETLKIEKEQLFLENQALQNQLQYFNDISANQTEEIKEASDEDKPVEIKKPRIK 720 Query: 721 KRDFVIQNKDDKLAKLSKKERIQAYAERLAKINANE 756 KRDFVIQNKDDKLAKLSKKERIQAYAERLAKINANE Sbjct: 721 KRDFVIQNKDDKLAKLSKKERIQAYAERLAKINANE 756 >MPNE-M12-01-000474 gi|13508213|ref|NP_110162.1| coiled coil protein, putative structural protein involved in cytosceleton [Mycoplasma pneumoniae] Length = 1033 Score = 206 bits (525), Expect = 2e-55 Identities = 194/711 (27%), Positives = 324/711 (45%), Gaps = 136/711 (19%) Query: 153 VSFEELFNQPSEEINETKKPEVQIFSTDKVKEPEQFDDFYSIE-----------NLTKAI 201 VSFE Q + +QI +++ +P Q+D ++ NLT+ + Sbjct: 352 VSFEMTLLQEQLDKALKHNAALQIQLEEQLAKPLQYDQSPVLQERIELLQNQNTNLTQEL 411 Query: 202 NPVHKTIQYDQNDDQPFVVKRILKEQHPTKK--VDELDDYNNKELLLENADLKKQIDDLK 259 N + + + QN+ ++ R+ +E K+ + L + N +LE KQ++ L+ Sbjct: 412 NELQQKLFKSQNNS--LLLARLEEENRTLKQHLQNNLPEANQLNFVLE-----KQLEQLQ 464 Query: 260 ENNNDQIFDLEQE-------------IDDLKRRLSEEKSKHLHTKKLQDDL-LQENRDLY 305 ++ + +EQ I L+ ++ +++ + K+ L L E + + Sbjct: 465 QDKHSLTLQIEQYKFDSKKHQEQLALIPSLRSEINSLETEVISLKQTNQRLSLIERENNF 524 Query: 306 EQLQNKPVAINPLSDEVNEELENLKQEKALLSDQLDALKNKS-------SNVQQQLA--- 355 + + K + L+DE + LKQ + + +D LK + Q+QLA Sbjct: 525 LKTEIKQLRETKLNDENTKYRNLLKQYELMRADSDAKLKELEHEQHLAHQHHQEQLAQLQ 584 Query: 356 -----LLPVXXXXXXXXXXXXXTAREANQRLDLVEQENDFLKNELKKLHDNTS--NDENE 408 L+ A+ Q+ ++EQ+N L L+ +N N Sbjct: 585 RHNEALVKELDQVKATNFELGLAAQGFEQQKVVLEQKNSSLLASLQAAEENVQALGITNS 644 Query: 409 KYDDLLNQYELL------FDENETKFDKLQVKQQALNLDY-QKTISALKHENDVLLDEIE 461 + + LN E FD K Q++Q +L Q+ ++ K +N L D++ Sbjct: 645 ELQNQLNVLEFTHKEKTAFDSKTLTLTKQQLEQTQFDLSLTQEQLATFKQQNQSLTDKL- 703 Query: 462 WTRSKDNDFNNTKNSFEEQKKALDEKLNGLTIQNQQLQDKIAELEEWNEEKSXXXXXXXX 521 + + N+ + S DE L L Q++ LQ+ +L++ Sbjct: 704 --MASETQLNHLQQS--------DENLTQLQTQHELLQESYNKLQD-----------EAN 742 Query: 522 XXXXXXKDSQNLFNVAQDKLATLEEVNLALNEKINDLEDEL-------SGSENSN---NL 571 +QN + A +LA ++ N L +K +++++EL + EN N NL Sbjct: 743 HTQQQFHQAQNELDAAHQQLALFKQNNEELTDKCSNIQNELHDLNRVKTNWENLNTEHNL 802 Query: 572 L------------------AKLQADHEILQESYGKLKTDFEKLKKNKLNDANEQYQDLLS 613 L A++QA+HE+LQESY K+K + +++ LN+AN QYQDLLS Sbjct: 803 LQDKYAQQKEQMQHEHSNLAQIQAEHELLQESYNKVKAELNEIQITNLNEANAQYQDLLS 862 Query: 614 AFEETNSELEKAKQSLSASDS---ENNQLKQQINS--------------LENAKKELQFT 656 A+E S K KQ L + E QL Q++++ L+ A LQ T Sbjct: 863 AYELLQSNHNKLKQELQVLNQVNLEKQQLAQKLHNTHQSLSQTHAELTQLQAAYNNLQAT 922 Query: 657 PVTSDEHLDELETLKIEKEQLFLENQALQNQLQYFNDISANQTEEIKEASDE-------- 708 P SDE L++ +++EK++L +N AL ++LQYFN+++++QT EIK DE Sbjct: 923 PPVSDELLEQFNQVQLEKQRLLQQNLALVHELQYFNELNSSQTHEIKTKQDETVKEVIIV 982 Query: 709 DKPVEI---KKPRIKKRDFVIQNKDDKLAKLSKKERIQAYAERLAKINANE 756 +K + + KKPR+KKRD VI+NK+D L KLSKKERIQAYAERLAKIN + Sbjct: 983 EKEIPVPPEKKPRLKKRDIVIENKEDALGKLSKKERIQAYAERLAKINGKQ 1033 Score = 202 bits (515), Expect = 2e-54 Identities = 157/626 (25%), Positives = 302/626 (48%), Gaps = 60/626 (9%) Query: 131 LKPSVITAEDDKDEIKPEATKQVSFEELFNQPSEEINETKKPEVQIFSTDKVKEPEQFDD 190 +KP+ +A K ATKQ ++L Q + + P V ++ K D Sbjct: 286 IKPAEDSAHQSAVLDKEIATKQAQLQQLQAQIELRQAQLETPPVTYMGVEEYKLLPVQD- 344 Query: 191 FYSIENLTKAINPVHKTIQYDQNDDQPFVVKRILKEQHPTKKVDELDDYNNKELLLENAD 250 + PV T+ ++ Q + K + +H +L++ K L + + Sbjct: 345 ----------VVPVQPTVSFEMTLLQEQLDKAL---KHNAALQIQLEEQLAKPLQYDQSP 391 Query: 251 LKKQIDDLKENNNDQIFDLEQEIDDLKRRLSEEKSKHLHTKKLQDDLLQENRDLYEQLQN 310 + ++ +L +N N +L QE+++L+++L + ++ L +L++ ENR L + LQN Sbjct: 392 VLQERIELLQNQNT---NLTQELNELQQKLFKSQNNSLLLARLEE----ENRTLKQHLQN 444 Query: 311 KPVAINPLSDEVNEELENLKQEKALLSDQLDALKNKSSNVQQQLALLPVXXXXXXXXXXX 370 N L+ + ++LE L+Q+K L+ Q++ K S Q+QLAL+P Sbjct: 445 NLPEANQLNFVLEKQLEQLQQDKHSLTLQIEQYKFDSKKHQEQLALIPSLRSEINSLETE 504 Query: 371 XXTAREANQRLDLVEQENDFLKNELKKLHDNTSNDENEKYDDLLNQYELLFDENETKFDK 430 + ++ NQRL L+E+EN+FLK E+K+L + NDEN KY +LL QYEL+ +++ K + Sbjct: 505 VISLKQTNQRLSLIERENNFLKTEIKQLRETKLNDENTKYRNLLKQYELMRADSDAKLKE 564 Query: 431 LQVKQQALNLDYQKTISALKHENDVLLDEIEWTRSKDNDFNNTKNSFEEQK--------- 481 L+ +Q + +Q+ ++ L+ N+ L+ E++ ++ + + FE+QK Sbjct: 565 LEHEQHLAHQHHQEQLAQLQRHNEALVKELDQVKATNFELGLAAQGFEQQKVVLEQKNSS 624 Query: 482 -----KALDEKLNGLTIQNQQLQDKIAELEEWNEEKSXXXXXXXXXXXXXXKDSQNLFNV 536 +A +E + L I N +LQ+++ LE ++EK+ + +Q ++ Sbjct: 625 LLASLQAAEENVQALGITNSELQNQLNVLEFTHKEKTAFDSKTLTLTKQQLEQTQFDLSL 684 Query: 537 AQDKLATLEEVNLALNEKINDLEDELSGSENSNNLLAKLQADHEILQESYGKLKTDFEKL 596 Q++LAT ++ N +L +K+ E +L+ + S+ L +LQ HE+LQESY KL+ Sbjct: 685 TQEQLATFKQQNQSLTDKLMASETQLNHLQQSDENLTQLQTQHELLQESYNKLQ------ 738 Query: 597 KKNKLNDANEQYQDLLSAFEETNSELEKAKQSLSASDSENNQLKQQINSLENAKKELQFT 656 ++AN Q F + +EL+ A Q L+ N +L + ++++N +L Sbjct: 739 -----DEANHTQQQ----FHQAQNELDAAHQQLALFKQNNEELTDKCSNIQNELHDLNRV 789 Query: 657 PVT----SDEHLDELETLKIEKEQLFLENQALQNQLQYFNDISANQTEEIKEASDEDKPV 712 + EH + +KEQ+ E+ L Q+Q +++ ++K +E + Sbjct: 790 KTNWENLNTEHNLLQDKYAQQKEQMQHEHSNLA-QIQAEHELLQESYNKVKAELNEIQIT 848 Query: 713 EIKKPRIKKRDF-----VIQNKDDKL 733 + + + +D ++Q+ +KL Sbjct: 849 NLNEANAQYQDLLSAYELLQSNHNKL 874 Score = 50.1 bits (118), Expect = 2e-08 Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 22/101 (21%) Query: 109 MAFQEVDDQSVLTKEIKTGFQELKPSVITAEDDKDEIKPE-------------------- 148 M F E + Q VLTKEIK GF E+ PS IT + K ++ Sbjct: 1 MEFLEQEGQEVLTKEIKAGFCEITPSSITEQTTKPQLDETQLVDEYVHTKELETTPIPIS 60 Query: 149 -ATKQVSFEELFNQPS-EEINETKKPEVQIFSTDKVKEPEQ 187 ATK+V FEE+FN PS ++++E+ I T ++K + Sbjct: 61 FATKEVLFEEVFNTPSTQQVDESVLVNEYIELTQQIKNASE 101 >SCER-S28-01-000806 ORFP:YDL058W USO1, Chr IV from 345664-351036 Length = 1790 Score = 99.8 bits (247), Expect = 3e-23 Identities = 152/820 (18%), Positives = 337/820 (41%), Gaps = 134/820 (16%) Query: 3 VDKELEISDFDNELDEKTLLKELVQRTNNILFSPSKITAIPFERNLLEKTFFGTVDEAEK 62 + KE + S+ +++ + K+L +++ + I + + + N L K E + Sbjct: 886 LQKEKDKSNVNHQKETKSLKEDIAAKITEIKAINENLEEMKIQCNNLSKEKEHISKELVE 945 Query: 63 EKSIVSFFNWMIDLKVLDKKWDKNVLNHYANQLKTREEEQQTVDQTMAFQEVDDQSVLTK 122 KS + ++ K+ +K L AN K + E +++ + A +E ++S + Sbjct: 946 YKSRFQSHDNLV-AKLTEK------LKSLANNYKDMQAENESLIK--AVEESKNESSIQ- 995 Query: 123 EIKTGFQELKPSVITAEDDKDEIKPEATKQVSFEELFNQPSEEINETKKPEVQIFSTDKV 182 L+ + + +K+ + E + S E+ Q + I++ ++ + +I S Sbjct: 996 -----LSNLQNKIDSMSQEKENFQIE---RGSIEKNIEQLKKTISDLEQTKEEIIS---- 1043 Query: 183 KEPEQFDDFYSIENLTKAINPVHKTIQYDQNDDQPFVVKRILKEQHPTKKVDELDDYNN- 241 K D++ S +L K T ND+ + + K + + EL Y N Sbjct: 1044 KSDSSKDEYESQISLLKEKLETATTA----NDENVNKISELTKTREELEA--ELAAYKNL 1097 Query: 242 -KELLLENADLKKQIDDLKENNN---DQIFDLEQEIDDLKRRLSEEKSKHLHTKKLQDDL 297 EL + +K + ++KEN ++ LE+E + K++L+ ++ +K +DL Sbjct: 1098 KNELETKLETSEKALKEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDL 1157 Query: 298 LQENRDLYEQLQNKPVAINPLSDEVNEELENLKQEKALLSDQLDALKNK----SSNVQQQ 353 + + EQ+ NK N ++N+E+ + +QE + + D L+ + S ++Q Sbjct: 1158 AAQLKKYEEQIANKERQYNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQ 1217 Query: 354 LALLPVXXXXXXXXXXXXXTAREANQ---------------RLDLVEQENDFLKNELKKL 398 L E N+ ++ ++ E +F + E+ +L Sbjct: 1218 SNLKKSEIDALNLQIKELKKKNETNEASLLESIKSVESETVKIKELQDECNFKEKEVSEL 1277 Query: 399 HDN--TSNDENEKYDDLLNQYELLFDENETKFDKLQVKQQALNLDYQKTISALKHENDVL 456 D S D+N KY +L + E + +E + K +L+++ + + +S K +++ Sbjct: 1278 EDKLKASEDKNSKYLELQKESEKIKEELDAKTTELKIQLEKIT-----NLSKAKEKSESE 1332 Query: 457 LDEIEWTRSKD------------NDFNNTKNSFEEQKKALDEKLNGLTIQNQQ----LQD 500 L ++ T S++ N+ +FE+++K L+E + +T + + L+D Sbjct: 1333 LSRLKKTSSEERKNAEEQLEKLKNEIQIKNQAFEKERKLLNEGSSTITQEYSEKINTLED 1392 Query: 501 KIAELEEWNEEKSXXXXXXXXXXXXXXKDSQNLFNVAQDKLATLEEVNLALNEKI--ND- 557 ++ L+ NE K+ + L Q+ + +L++ L+ +KI ND Sbjct: 1393 ELIRLQNENELKAKEIDNTRSELEKVSLSNDELLEEKQNTIKSLQDEILSYKDKITRNDE 1452 Query: 558 ------------------------------------LEDELSGS----ENSNNLLAKLQA 577 LE+E S E S ++ KL++ Sbjct: 1453 KLLSIERDNKRDLESLKEQLRAAQESKAKVEEGLKKLEEESSKEKAELEKSKEMMKKLES 1512 Query: 578 DHEI----LQESYGKLKTDFEKLKKNK------LNDANEQYQDLLSAFEETNSELEKAKQ 627 E L+ S ++ EKL+++K + + + DL+S E+ ++E+ K Sbjct: 1513 TIESNETELKSSMETIRKSDEKLEQSKKSAEEDIKNLQHEKSDLISRINESEKDIEELKS 1572 Query: 628 SLSASDSENNQLKQQINSLENAKKELQFTPVTSDEHLDELETLKIEKEQLFLENQALQNQ 687 L ++L+ L NA+++++ + +LE ++ E + E ++ Q + Sbjct: 1573 KLRIEAKSGSELETVKQELNNAQEKIRINAEENTVLKSKLEDIERELKDKQAEIKSNQEE 1632 Query: 688 LQYFN------DISANQTEEIKEASDEDKPVEIKKPRIKK 721 + + + T++ + S+E++ E++K +++K Sbjct: 1633 KELLTSRLKELEQELDSTQQKAQKSEEERRAEVRKFQVEK 1672 Score = 85.9 bits (211), Expect = 4e-19 Identities = 150/748 (20%), Positives = 311/748 (41%), Gaps = 103/748 (13%) Query: 89 NHYANQLKTREEEQQTVDQTMAFQEVDDQSVLTKEI-KTG-------------FQELKPS 134 ++YA+++K Q D + ++++ S+LT E+ +TG F E Sbjct: 656 DNYASRIK-----QFKKDSYFSKVDMNEDSILTPELDETGLPKVYFSTYFIQLFNENIYR 710 Query: 135 VITA-EDDKDEIKPEATKQVSFEE---LFNQPSEEINETKKPEVQIFSTDK--------- 181 + TA D DE E ++SFEE L Q ++ E + + ST + Sbjct: 711 IRTALSHDPDE---EPINKISFEEVEKLQRQCTKLKGEITSLQTETESTHENLTEKLIAL 767 Query: 182 VKEPEQFDDFYSIENLTKAINPVHKTIQYDQN--DDQPFVVKRILKEQHPTKKVDELDDY 239 E ++ D+ Y I +N H +++ + + + + V+ L E + V E D Sbjct: 768 TNEHKELDEKYQI------LNSSHSSLKENFSILETELKNVRDSLDEMTQLRDVLETKDK 821 Query: 240 NNKELLLE-NADLKKQIDDLK--ENNNDQIFDLEQEIDD-----------LKRRLS--EE 283 N+ LLE + + KQ D +K E + I +++ +D L R + EE Sbjct: 822 ENQTALLEYKSTIHKQEDSIKTLEKGLETILSQKKKAEDGINKMGKDLFALSREMQAVEE 881 Query: 284 KSKHLHTKKLQDDL--LQENRDLYEQLQNKPVAINPLSDEVNE---ELENLKQEKALLSD 338 K+L +K + ++ +E + L E + K I +++ + E + NL +EK +S Sbjct: 882 NCKNLQKEKDKSNVNHQKETKSLKEDIAAKITEIKAINENLEEMKIQCNNLSKEKEHISK 941 Query: 339 QLDALK-------NKSSNVQQQLALLPVXXXXXXXXXXXXXTAREANQRLDLVEQENDFL 391 +L K N + + ++L L A E ++ ++ N L Sbjct: 942 ELVEYKSRFQSHDNLVAKLTEKLKSLANNYKDMQAENESLIKAVEESKNESSIQLSN--L 999 Query: 392 KNELKKLHDNTSNDENEK--YDDLLNQYELLFDENETKFDKLQVKQQALNLDYQKTISAL 449 +N++ + N + E+ + + Q + + E +++ K + +Y+ IS L Sbjct: 1000 QNKIDSMSQEKENFQIERGSIEKNIEQLKKTISDLEQTKEEIISKSDSSKDEYESQISLL 1059 Query: 450 KHE-------NDVLLDEI-EWTRSKDN------DFNNTKNSFEEQKKALDEKLNGLTIQN 495 K + ND +++I E T++++ + N KN E + + ++ L + Sbjct: 1060 KEKLETATTANDENVNKISELTKTREELEAELAAYKNLKNELETKLETSEKALKEVKENE 1119 Query: 496 QQLQDKIAELEEWNEEKSXXXXXXXXXXXXXXKDSQNLFNVAQDKLATLEEVNLALNEKI 555 + L+++ +LE+ E K+ ++L + + NE+I Sbjct: 1120 EHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIANKERQYNEEI 1179 Query: 556 NDLEDELSGSENSNNLLAKLQADHEILQESYGKLKTDFEKLKKNKLNDANEQYQDLLSAF 615 + L DE++ ++ N + K + E ++ + LKK++++ N Q ++L Sbjct: 1180 SQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDALNLQIKELKKKN 1239 Query: 616 EETNSELEKAKQSLSASDSENNQLKQQINSLENAKKELQFTPVTSDEHLDELETLKIE-- 673 E + L ++ +S+ + + +L+ + N E EL+ S++ + L+ E Sbjct: 1240 ETNEASLLESIKSVESETVKIKELQDECNFKEKEVSELEDKLKASEDKNSKYLELQKESE 1299 Query: 674 --KEQLFLENQALQNQLQYFNDI------SANQTEEIKEASDEDKPVEIKKPRIKKRDFV 725 KE+L + L+ QL+ ++ S ++ +K+ S E++ ++ K + Sbjct: 1300 KIKEELDAKTTELKIQLEKITNLSKAKEKSESELSRLKKTSSEERKNAEEQLEKLKNEIQ 1359 Query: 726 IQN----KDDKLAKLSKKERIQAYAERL 749 I+N K+ KL Q Y+E++ Sbjct: 1360 IKNQAFEKERKLLNEGSSTITQEYSEKI 1387 Score = 85.1 bits (209), Expect = 7e-19 Identities = 171/773 (22%), Positives = 313/773 (40%), Gaps = 122/773 (15%) Query: 4 DKELEISDFDNELDEKTLLKELVQRTNNILFSPSKITAIPFERNL--LEKTFFGTVDEAE 61 + +++S+ N++D + KE Q I E+N+ L+KT E Sbjct: 991 ESSIQLSNLQNKIDSMSQEKENFQ-----------IERGSIEKNIEQLKKTISDLEQTKE 1039 Query: 62 K--EKSIVSFFNWMIDLKVLDKKW-------DKNVLNHYANQLKTREEEQQTVDQTMAFQ 112 + KS S + + +L +K D+NV N + KTREE + + + Sbjct: 1040 EIISKSDSSKDEYESQISLLKEKLETATTANDENV-NKISELTKTREELEAELAAYKNLK 1098 Query: 113 -----EVDDQSVLTKEIKTGFQELKPSVITAEDDKDEIKPEATK-QVSFEELFNQPSEEI 166 +++ KE+K + LK I E + E K + + + E L + + Sbjct: 1099 NELETKLETSEKALKEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLA 1158 Query: 167 NETKKPEVQIFSTDKVKEPEQFDDFYSIENLTKAINPVHKTIQYDQNDDQPFVVKRI--L 224 + KK E QI + KE + ++ + + + +++I+ +ND+ VK + Sbjct: 1159 AQLKKYEEQIAN----KERQYNEEISQLNDEITSTQQENESIK-KKNDELEGEVKAMKST 1213 Query: 225 KEQHPTKKVDELDDYNN--KELLLEN----ADLKKQIDDLKENN------NDQIFDLEQE 272 E+ K E+D N KEL +N A L + I ++ D+ E+E Sbjct: 1214 SEEQSNLKKSEIDALNLQIKELKKKNETNEASLLESIKSVESETVKIKELQDECNFKEKE 1273 Query: 273 IDDLKRRL--SEEK-SKHLH----TKKLQDDLLQENRDLYEQLQNKPVAINPLSDEVNEE 325 + +L+ +L SE+K SK+L ++K++++L + +L QL+ K ++ ++ E Sbjct: 1274 VSELEDKLKASEDKNSKYLELQKESEKIKEELDAKTTELKIQLE-KITNLSKAKEKSESE 1332 Query: 326 LENLK----QEKALLSDQLDALKN----KSSNVQQQLALLPVXXXXXXXXXXXXXTARE- 376 L LK +E+ +QL+ LKN K+ +++ LL E Sbjct: 1333 LSRLKKTSSEERKNAEEQLEKLKNEIQIKNQAFEKERKLLNEGSSTITQEYSEKINTLED 1392 Query: 377 ----ANQRLDLVEQENDFLKNELKKLHDNTSNDE--NEKY-------DDLL--------N 415 +L +E D ++EL+K+ + SNDE EK D++L N Sbjct: 1393 ELIRLQNENELKAKEIDNTRSELEKV--SLSNDELLEEKQNTIKSLQDEILSYKDKITRN 1450 Query: 416 QYELLFDENETKFDKLQVKQQALNLDYQKT-----ISALKHENDVLLDEIEWTRSKDNDF 470 +LL E + K D +K+Q K + L+ E+ E+E ++ Sbjct: 1451 DEKLLSIERDNKRDLESLKEQLRAAQESKAKVEEGLKKLEEESSKEKAELEKSKEMMKKL 1510 Query: 471 NNTKNS------------------FEEQKKALDEKLNGLTIQNQQLQDKIAELEEWNEEK 512 +T S E+ KK+ +E + L + L +I E E+ EE Sbjct: 1511 ESTIESNETELKSSMETIRKSDEKLEQSKKSAEEDIKNLQHEKSDLISRINESEKDIEEL 1570 Query: 513 SXXXXXXXXXXXXXXKDSQNLFNVAQDKLATLEEVNLALNEKINDLEDELSGSENSNNLL 572 Q L N AQ+K+ E N L K+ D+E EL + + Sbjct: 1571 KSKLRIEAKSGSELETVKQELNN-AQEKIRINAEENTVLKSKLEDIERELKDKQAE---I 1626 Query: 573 AKLQADHEILQESYGKLKTDFEKLKKNKLNDANEQYQDLLSAFEETNSELEKAKQSLSAS 632 Q + E+L +L+ + + ++ K + E+ + + F+ S+L++ L Sbjct: 1627 KSNQEEKELLTSRLKELEQELDSTQQ-KAQKSEEERRAEVRKFQVEKSQLDEKAMLL--- 1682 Query: 633 DSENNQLKQQINSLENAKKELQFTPVTSDEHLDELETLKIEKEQLFLENQALQ 685 +++ N L +N + K++ T+D E+E L E + L EN L+ Sbjct: 1683 ETKYNDL---VNKEQAWKRDEDTVKKTTDSQRQEIEKLAKELDNLKAENSKLK 1732 Score = 52.4 bits (124), Expect = 5e-09 Identities = 88/368 (23%), Positives = 163/368 (44%), Gaps = 36/368 (9%) Query: 10 SDFDNELDEK--TLLKELVQRTNNILFSPSKITAIPFERNLLEKTFFGTVDEA--EKEKS 65 S E EK TL EL++ N + K I R+ LEK DE EK+ + Sbjct: 1377 STITQEYSEKINTLEDELIRLQNE---NELKAKEIDNTRSELEKVSLSN-DELLEEKQNT 1432 Query: 66 IVSFFNWMI---------DLKVLDKKWD-KNVLNHYANQLKTREEEQQTVDQTMAFQEVD 115 I S + ++ D K+L + D K L QL+ +E + V++ + E + Sbjct: 1433 IKSLQDEILSYKDKITRNDEKLLSIERDNKRDLESLKEQLRAAQESKAKVEEGLKKLE-E 1491 Query: 116 DQSVLTKEIKTGFQELKPSVITAEDDKDEIKPEATKQVSFEELFNQPSEEINETKKPEVQ 175 + S E++ + +K T E ++ E+K +E Q + E K +Q Sbjct: 1492 ESSKEKAELEKSKEMMKKLESTIESNETELKSSMETIRKSDEKLEQSKKSAEEDIK-NLQ 1550 Query: 176 IFSTD---KVKEPEQ-FDDFYSIENLTKAINPVHKTIQYDQNDDQPFVVKRILKEQHPTK 231 +D ++ E E+ ++ S + +T++ + N+ Q + RI E++ Sbjct: 1551 HEKSDLISRINESEKDIEELKSKLRIEAKSGSELETVKQELNNAQEKI--RINAEENTVL 1608 Query: 232 KVDELDDYNNKELLLENADLKKQIDDLKENNNDQIFDLEQEIDDLKRRLS---EEKSKHL 288 K +L+D +EL + A++K ++ KE ++ +LEQE+D +++ EE+ + Sbjct: 1609 K-SKLEDIE-RELKDKQAEIKSNQEE-KELLTSRLKELEQELDSTQQKAQKSEEERRAEV 1665 Query: 289 HTKKLQDDLLQENRDL----YEQLQNKPVAINPLSDEVNEELENLKQEKALLSDQLDALK 344 +++ L E L Y L NK A D V + ++ +QE L+ +LD LK Sbjct: 1666 RKFQVEKSQLDEKAMLLETKYNDLVNKEQAWKRDEDTVKKTTDSQRQEIEKLAKELDNLK 1725 Query: 345 NKSSNVQQ 352 ++S +++ Sbjct: 1726 AENSKLKE 1733 >MGEN-G37-01-000221 MG218 cytadherence accessory protein (hmw2) Length = 1805 Score = 86.7 bits (213), Expect = 2e-19 Identities = 146/679 (21%), Positives = 282/679 (41%), Gaps = 130/679 (19%) Query: 140 DDKDEIKPEATKQVSFEELFNQPSEEINETKKPEVQIFSTDKVKEPEQFDDFYSIENLTK 199 D K ++P + F++ + Q E N +K +V +KE + +D ++NL Sbjct: 5 DKKPSLQP--IYDIGFDDGYLQSEYEKNRSKT-DVDKIENQLLKEIKSLED--ELKNLKG 59 Query: 200 AINPVHKTIQYDQNDDQPFVVKRILKEQHPTKKVDELDDYNNKELLLEN-ADLKKQIDDL 258 N Q +D P + K+I + ++ +++Y N + + D ++D+L Sbjct: 60 LKN---------QAEDNPELDKKINHLEVDLNRL--VNEYKNFQFQKNHMVDKVSELDNL 108 Query: 259 KENNNDQIFDLEQEIDDLKRRLSEEKSKHLHTKKLQDDLLQENRDLYEQLQNKPVAINPL 318 +++ L+QE D SK+ + Q + + D + ++N+ IN L Sbjct: 109 TRFYKNELTRLQQENADFLN------SKYANLANFQANYHNKLNDFHRLIENQNQTINRL 162 Query: 319 SDEVNEELENLKQEKALLSDQLDALKNKSSNVQQQLALLPVXXXXXXXXXXXXXTAREAN 378 + ++N + L+ + + L+N + V+++ LL V E Sbjct: 163 NQKINGN-------QNLIDNNVALLQNPNITVEKKNYLLNVIDQLYNELDQL-----ENQ 210 Query: 379 QRLDLVEQENDFLK-----NELKKLHDNTSNDENEKYDDLLNQYELLFDENETKFDKLQV 433 +RL +E EN + + NEL+ +++N ++ + +QY+ DE K+Q+ Sbjct: 211 KRLLSIEYENTYRELVSADNELQNVYENIDQNQIQ----FKHQYQTYRDELSQLERKIQL 266 Query: 434 KQQALNLDYQKTISALKHENDVLLDEIEWTRSKDNDFNNTKNSFEEQKKALDEKLNGLTI 493 +Q L +D + + + D ++ R + D + SF++ G+T Sbjct: 267 TKQEL-VDKESALRVKIDDADFYIN----ARLAELDDVAKQLSFQD----------GITK 311 Query: 494 QN-QQLQDKIAELEEWNEEKSXXXXXXXXXXXXXXKDSQNLFNVAQDKLATLEEVNLALN 552 QN Q ++DK+ L N+EK + FN+ Q L + ++ Sbjct: 312 QNAQHVEDKLVAL---NKEKDRLNT-----------QKEAFFNLRQSALIDINKLQQENE 357 Query: 553 EKINDLEDELSGSENS-NNLLAKLQADHEILQESYGKLKTDFEKLKKNKLNDANEQYQ-- 609 LE + + E ++ L KL+ +++ LQ + K + + LN E ++ Sbjct: 358 LFAKHLEHQQNEFEQKQSDSLLKLETEYKALQHKINEFKNESATKSEELLNQERELFEKR 417 Query: 610 -DLLSAFEETNSELEKAKQSLSASDSENNQLKQQINSLENAKKEL--------QFTPVTS 660 ++ + + + E E ++S + N++KQ +LE AKKEL Q V S Sbjct: 418 REIDTLLTQASLEYEHQRESSQLLKDKQNEVKQHFQNLEYAKKELDKERNLLDQQKKVDS 477 Query: 661 D-------------EHLDELETLKIEK------EQLFLENQALQNQLQYFNDISANQTE- 700 + + L+EL +K +K E LF E Q Q+Q + N++ A Q E Sbjct: 478 EAIFQLKEKVAQERKELEELYLVKKQKQDQKENELLFFEKQLKQHQADFENELEAKQQEL 537 Query: 701 -EIKEA--------SDEDKPV------------EIKKPRIKKRDF--VIQNKDDKLAKLS 737 E K A D++K + ++K + K DF ++QN+ + L + Sbjct: 538 FEAKHALERSFIKLEDKEKDLNTKAQQIANEFSQLKTDKSKSADFELMLQNEYENLQQEK 597 Query: 738 KK-ERIQAYAERLAKINAN 755 +K + + Y ER A + +N Sbjct: 598 QKLFQERTYFERNAAVLSN 616 Score = 86.3 bits (212), Expect = 3e-19 Identities = 145/716 (20%), Positives = 298/716 (41%), Gaps = 121/716 (16%) Query: 54 FGTVDEAEKEKSIVS--FFNWMIDLKVLDKKWDKNVLNHYANQLKTREEEQQTVDQTMAF 111 + +D+ E +K ++S + N +L D + N NQ++ + + Q D+ Sbjct: 201 YNELDQLENQKRLLSIEYENTYRELVSADNELQNVYENIDQNQIQFKHQYQTYRDELSQL 260 Query: 112 Q---EVDDQSVLTKE----IKTGFQELKPSVITAEDDKDEIKPEATKQVSFEELFNQPSE 164 + ++ Q ++ KE +K + + AE D + KQ+SF++ + + Sbjct: 261 ERKIQLTKQELVDKESALRVKIDDADFYINARLAELD------DVAKQLSFQDGITKQNA 314 Query: 165 EINETKKPEVQIFSTDKVKEPEQFDDFYS--------IENLTKAINPVHKTIQYDQNDDQ 216 + E K + + +K + Q + F++ I L + K +++ QN+ + Sbjct: 315 QHVEDK---LVALNKEKDRLNTQKEAFFNLRQSALIDINKLQQENELFAKHLEHQQNEFE 371 Query: 217 PFVVKRILKEQHPTKKVD-ELDDYNNKELLLENADLKKQIDDLKENNNDQIFDLEQEIDD 275 +LK + K + +++++ N E+A +++ N ++F+ +EID Sbjct: 372 QKQSDSLLKLETEYKALQHKINEFKN-----ESATKSEEL----LNQERELFEKRREIDT 422 Query: 276 LKRRLSEEKSKHLHTKKLQDDLLQENRDLYEQLQNKPVAINPLSDEVNEELENLKQEKAL 335 L L++ ++ H ++ L + ++ + QN A E+++E L Q+K + Sbjct: 423 L---LTQASLEYEHQRESSQLLKDKQNEVKQHFQNLEYA----KKELDKERNLLDQQKKV 475 Query: 336 LSDQLDALKNKSSNVQQQLALLPVXXXXXXXXXXXXXTAREANQRLDLVEQENDFLKNEL 395 S+ + LK K + +++L L + Q+ D E E F + +L Sbjct: 476 DSEAIFQLKEKVAQERKELEELYLVK----------------KQKQDQKENELLFFEKQL 519 Query: 396 KKLHDNTSNDENEKYDDLLNQYELLFDENETKFDKLQVKQQALNLDYQKTISALKHENDV 455 K+ + N+ K +L L E F KL+ K++ LN Q+ + Sbjct: 520 KQHQADFENELEAKQQELFEAKHAL----ERSFIKLEDKEKDLNTKAQQIANEFS----- 570 Query: 456 LLDEIEWTRSKDNDF-----NNTKNSFEEQKKALDEKL---NGLTIQNQQLQDKIAELEE 507 +++ +SK DF N +N +E++K E+ + + +LQ K EL + Sbjct: 571 ---QLKTDKSKSADFELMLQNEYENLQQEKQKLFQERTYFERNAAVLSNRLQQKREELLQ 627 Query: 508 WNEEKSXXXXXXXXXXXXXXKDSQNLFNVAQDK--LATLEEVNLALNEKINDLEDELSGS 565 E + + L N + K +A++E+ L +K+ D S Sbjct: 628 QKETLDQLTKSF---------EQERLINQREHKELVASVEKQKEILGKKLQDFSQT---S 675 Query: 566 ENSNNLLAKLQADHEILQESYGKLKTDFEKLKKNKLNDANEQYQDLLSAFEETNSELEKA 625 N++ LA+ + + ++ + E +K LND N E ++L + Sbjct: 676 LNASKNLAEREMAIKFKEK-------EIEATEKQLLNDVNNA--------EVIQADLAQL 720 Query: 626 KQSLSASDSENNQLKQQINSLEN-AKKELQFTPVTSDEHLDELETLKIEKEQLFLENQA- 683 QSL+ SE KQ+I N + K+L ++ + L EL+TL+ ++Q +NQA Sbjct: 721 NQSLNQERSELQNAKQRIADFHNDSLKKLNEYELSLQKRLQELQTLEANQKQHSYQNQAY 780 Query: 684 -------LQNQLQYFNDISANQTEEI----KEASDEDKPVEIKKPRIKKRDFVIQN 728 L + Q F ++ QT E+ + SD+ + + +++ + ++ + N Sbjct: 781 FEGELDKLNREKQAFLNLRKKQTMEVDAIKQRLSDKHQALNMQQAELDRKTHELNN 836 Score = 77.0 bits (188), Expect = 2e-16 Identities = 155/802 (19%), Positives = 323/802 (40%), Gaps = 112/802 (13%) Query: 10 SDFDNELDEKTLLKELVQRTNNILFSPSKITAIPFERNLLEKTFFGTVDEAEKEKSIVSF 69 +DF+NEL+ K +EL + + + S K+ + N + + + +KS + Sbjct: 524 ADFENELEAKQ--QELFEAKHALERSFIKLEDKEKDLNTKAQQIANEFSQLKTDKSKSAD 581 Query: 70 FNWMIDLKVLDKKWDKNVLNH-----------YANQLKTREEE----QQTVDQ-TMAFQE 113 F M+ + + + +K L +N+L+ + EE ++T+DQ T +F++ Sbjct: 582 FELMLQNEYENLQQEKQKLFQERTYFERNAAVLSNRLQQKREELLQQKETLDQLTKSFEQ 641 Query: 114 VDDQSVLTKEIKTGFQELKPSVITAEDDKDEI--KPEATKQVSFEELFNQPSEEINETKK 171 E +E K V + E K+ + K + Q S N E+ K Sbjct: 642 ---------ERLINQREHKELVASVEKQKEILGKKLQDFSQTSLNASKNLAEREM-AIKF 691 Query: 172 PEVQIFSTDKVKEPEQFDDFYSIENLTKAINPVHKTIQYDQNDDQPFVVKRILKEQHPTK 231 E +I +T+K + +D + E + + +++++ ++++ Q K+ + + H Sbjct: 692 KEKEIEATEK----QLLNDVNNAEVIQADLAQLNQSLNQERSELQN--AKQRIADFHN-- 743 Query: 232 KVDELDDYNNKELLLENADLKKQIDDLKENNNDQIFDLEQEIDDLKRRLSEEKSKHLHTK 291 D L N EL L+ +++ L+ N + + + +L+ EK L+ + Sbjct: 744 --DSLKKLNEYELSLQKR--LQELQTLEANQKQHSYQNQAYFEGELDKLNREKQAFLNLR 799 Query: 292 KLQ----DDLLQENRDLYEQLQNKPVAINPLSDEVNEELENLKQEKALLSDQLDALKNKS 347 K Q D + Q D ++ L + ++ + E+N N ++ L DQL +K Sbjct: 800 KKQTMEVDAIKQRLSDKHQALNMQQAELDRKTHELNNAFLNHDADQKSLQDQLATVKETQ 859 Query: 348 SNVQQQLALLPVXXXXXXXXXXXXXTAREANQRLDLVEQENDFLKNELKKLHDNTSNDEN 407 + + + L RE + + ++ ++L+K+++ T E+ Sbjct: 860 KLIDLERSAL-------------LEKQREFAENVAGFKRHWSNKTSQLQKIYELTKKQES 906 Query: 408 EK----------YDDLLNQYELLFDENETKFDKLQVKQQALN----------LDYQKTIS 447 E+ + DL Y++ + + +F +++ KQ+ L+ L+ Sbjct: 907 EQTQKETELKIAFSDLQKDYQVFELQKDQEFRQIEAKQRELDKLAEKNNQVKLELDNRFQ 966 Query: 448 ALKHE-NDVLLDEIEWTRS------KDNDFNNTKNSFEEQKKALDEKLNG----LTIQNQ 496 AL+++ D + ++E R + FN S +Q++ L +K+ L +NQ Sbjct: 967 ALQNQKQDTVQAQLELEREQHQLNLEQTAFNQANESLLKQREQLTKKIQAFHYELKKRNQ 1026 Query: 497 QLQDKIAELEEWNEEKSXXXXXXXXXXXXXXKDSQNLFNVAQDKLATLEEVNLALNEKIN 556 L K L +++ K+ + + +L LE++ +L++ Sbjct: 1027 FLALKGKRLFAKEQDQQRKDQEINWRFKQFEKEYTDFDEAKKRELEELEKIRRSLSQSNV 1086 Query: 557 DLEDELSGSENSNNLLAKLQADHEILQESYGKLKTDFEKLKKN---KLNDANEQYQDLLS 613 +LE + L K+Q + +I ++ F +KN N+AN + L+ Sbjct: 1087 ELERKREKLATDFTNLNKVQHNTQINRDQLNSQIRQFLLERKNFQRFSNEANAKKAFLIK 1146 Query: 614 AFEETNSELEKAKQSLSASDSENNQLKQQINSLENAKKELQFTPVTSDEHLDELETLKIE 673 S L+ K++L+ E ++ +Q KKELQ + +LE K E Sbjct: 1147 RLRSFASNLKLQKEALAIQKLEFDKRDEQ------QKKELQQATL-------QLEQFKFE 1193 Query: 674 KEQLFLENQ----ALQNQLQYFNDISANQTEEIKEASDEDKPVEIKKPRIKKRDFVIQNK 729 K+ +E Q A++ Q + +D +++ E + + K + + +Q K Sbjct: 1194 KQNFDIEKQRQLVAIKTQCEKLSDEKKALNQKLVELKNLSQTYLANKNKAEYSQQQLQQK 1253 Query: 730 DDKLAKLSKKERIQAYAERLAK 751 L L KE ++ ++L K Sbjct: 1254 YTNL--LDLKENLERTKDQLDK 1273 Score = 68.9 bits (167), Expect = 5e-14 Identities = 143/709 (20%), Positives = 282/709 (39%), Gaps = 90/709 (12%) Query: 102 QQTVDQTMAFQEVDD-QSVLTKEIKTGFQELKPSVITAEDDKDEIKPEATKQVSFEELFN 160 Q ++ + +VD ++ L KEIK+ ELK + ++ E PE K+++ E+ Sbjct: 24 QSEYEKNRSKTDVDKIENQLLKEIKSLEDELKN--LKGLKNQAEDNPELDKKINHLEV-- 79 Query: 161 QPSEEINETKKPEVQI-FSTDKVKEPEQFDDFYSIE------------------------ 195 + +NE K + Q DKV E + FY E Sbjct: 80 DLNRLVNEYKNFQFQKNHMVDKVSELDNLTRFYKNELTRLQQENADFLNSKYANLANFQA 139 Query: 196 NLTKAINPVHKTIQYDQNDDQPFVVKRILKEQHPTKKVDELDDYNNKELLLENADLKKQI 255 N +N H+ I+ +Q + R+ ++ + + + +N LL+N ++ + Sbjct: 140 NYHNKLNDFHRLIE-----NQNQTINRLNQKINGNQNL-----IDNNVALLQNPNITVEK 189 Query: 256 DDLKENNNDQIFDLEQEIDDLKRRLSEEKSKHLHTKKLQDDLLQENRDLYEQLQNKPVAI 315 + N DQ+++ ++++ KR LS E D+ LQ ++YE + + Sbjct: 190 KNYLLNVIDQLYNELDQLENQKRLLSIEYENTYRELVSADNELQ---NVYENIDQNQIQF 246 Query: 316 NPLSDEVNEELENLKQE----KALLSDQLDALKNKSSN----VQQQLALL-PVXXXXXXX 366 +EL L+++ K L D+ AL+ K + + +LA L V Sbjct: 247 KHQYQTYRDELSQLERKIQLTKQELVDKESALRVKIDDADFYINARLAELDDVAKQLSFQ 306 Query: 367 XXXXXXTAREANQRLDLVEQENDFLKNELKKLHDNTSNDENEKYDDLLNQYELLFDENET 426 A+ +L + +E D L N K+ N + L + EL E Sbjct: 307 DGITKQNAQHVEDKLVALNKEKDRL-NTQKEAFFNLRQSALIDINKLQQENELFAKHLEH 365 Query: 427 KFDKLQVKQQALNLDYQKTISALKHENDVLLDEIEWTRSKDNDFNNTKNSFEEQKKALDE 486 + ++ + KQ L + AL+H+ + +E + +K + N + E+++ +D Sbjct: 366 QQNEFEQKQSDSLLKLETEYKALQHKINEFKNE---SATKSEELLNQERELFEKRREIDT 422 Query: 487 KLNGLTIQ-------NQQLQDKIAELEEWNEE----KSXXXXXXXXXXXXXXKDSQNLF- 534 L +++ +Q L+DK E+++ + K DS+ +F Sbjct: 423 LLTQASLEYEHQRESSQLLKDKQNEVKQHFQNLEYAKKELDKERNLLDQQKKVDSEAIFQ 482 Query: 535 ---NVAQDKLATLEEVNLALNEKINDLEDEL-----SGSENSNNLLAKLQADHEILQESY 586 VAQ++ LEE+ L +K + E+EL ++ + +L+A + L E+ Sbjct: 483 LKEKVAQER-KELEELYLVKKQKQDQKENELLFFEKQLKQHQADFENELEAKQQELFEAK 541 Query: 587 GKLKTDFEKLKKNKLNDANEQYQDLLSAFEETNSELEKAKQSLSASDSENNQLKQQINSL 646 L+ F KL ++K D N + Q + + F + ++ K+ +E L+Q+ L Sbjct: 542 HALERSFIKL-EDKEKDLNTKAQQIANEFSQLKTDKSKSADFELMLQNEYENLQQEKQKL 600 Query: 647 ENAKKELQFTPVTSDEHLDELETLKIEKEQLFLENQALQNQLQYF-NDISANQTEEIKEA 705 + + L + ++E+L + + L + F + NQ E + Sbjct: 601 FQERTYFERNAAVLSNRLQQ------KREELLQQKETLDQLTKSFEQERLINQREHKELV 654 Query: 706 SDEDKPVEIKKPRIKKRDFVIQNKDDKLAKLS-----KKERIQAYAERL 749 + +K EI +++ N LA+ K++ I+A ++L Sbjct: 655 ASVEKQKEILGKKLQDFSQTSLNASKNLAEREMAIKFKEKEIEATEKQL 703 Score = 64.7 bits (156), Expect = 1e-12 Identities = 144/742 (19%), Positives = 299/742 (40%), Gaps = 105/742 (14%) Query: 94 QLKTREEEQQTVDQT---MAFQEVD-DQSVLTKEIKTGFQELKPSVITAE---DDKDEIK 146 +L ++E +QT +T +AF ++ D V + F++++ + + +++K Sbjct: 899 ELTKKQESEQTQKETELKIAFSDLQKDYQVFELQKDQEFRQIEAKQRELDKLAEKNNQVK 958 Query: 147 PEATKQVSFEELFNQPSEEIN---ETKKPEVQIFSTDKVKEPEQFDDFYSIENLTKAINP 203 E + F+ L NQ + + E ++ + Q+ E LTK I Sbjct: 959 LELDNR--FQALQNQKQDTVQAQLELEREQHQLNLEQTAFNQANESLLKQREQLTKKIQA 1016 Query: 204 VHKTIQYDQNDDQPFVVKRILKEQHPTKKVDELDDYNNKELLLENADL----KKQIDDLK 259 H ++ +N KR+ ++ ++ D+ ++ K+ E D K+++++L+ Sbjct: 1017 FHYELK-KRNQFLALKGKRLFAKEQDQQRKDQEINWRFKQFEKEYTDFDEAKKRELEELE 1075 Query: 260 ENNNDQIFDLEQEIDDLKRRLSEEKSKHLHTKKLQDDLLQENRDLYE------------- 306 + L Q +L+R+ + + + K+Q + Q NRD Sbjct: 1076 KIRRS----LSQSNVELERKREKLATDFTNLNKVQHNT-QINRDQLNSQIRQFLLERKNF 1130 Query: 307 -------------------------QLQNKPVAINPLSDEVNEELENLKQEKALLSDQLD 341 +LQ + +AI L + +E + + ++A L + Sbjct: 1131 QRFSNEANAKKAFLIKRLRSFASNLKLQKEALAIQKLEFDKRDEQQKKELQQATLQLEQF 1190 Query: 342 ALKNKSSNVQQQLALLPVXXXXXXXXXXXXXTAREANQRL-DLVEQENDFLKNELKKLHD 400 + ++ ++++Q L+ + + NQ+L +L +L N+ K + Sbjct: 1191 KFEKQNFDIEKQRQLVAIKTQCEKLSDEK----KALNQKLVELKNLSQTYLANKNKA--E 1244 Query: 401 NTSNDENEKYDDLLNQYELLFDENETKFDKLQVKQQALNLDYQKTISALKHENDVLL--- 457 + +KY +LL+ E L E D+L K +++ K + L+ E LL Sbjct: 1245 YSQQQLQQKYTNLLDLKENL----ERTKDQLDKKHRSIFARLTKFANDLRFEKKQLLKAQ 1300 Query: 458 ----DEIEWTRSKDNDFNNTKNSFEEQKKALDEKLNGLTIQNQQLQDKIAELEEWNEEKS 513 D+ + + + + N E ++ L+++++ Q +Q D I + ++K Sbjct: 1301 RIVDDKNRLLKENERNLHFLSNETERKRAVLEDQISYFEKQRKQATDAILASHKEVKKKE 1360 Query: 514 XXXXXXXXXXXXXXKDSQNLFNVAQDKLATLEEVNLALNEKINDLEDELSGSENSNNLLA 573 N F + E L K+ +L+ L NSNN Sbjct: 1361 GELQKLLVELETRKTKLNNDFAKFSRQREEFENQRL----KLLELQKTLQTQTNSNNF-- 1414 Query: 574 KLQADHEILQESY--GKLKTDFEKLK--KNKLNDANEQYQDLLSAFEETNSE----LEKA 625 K +A EI + SY G + +F+K + KNK + E ++ + E S+ L++ Sbjct: 1415 KTKAIQEI-ENSYKRGMEELNFQKKEFDKNK-SRLYEYFRKMRDEIERKESQVKLVLKET 1472 Query: 626 KQSLSASDSENNQLKQQINSLENAKKELQFTPVTSDEHLDELETLKIEKEQLFLENQALQ 685 ++ + +++ N+L + N+++ +KEL+ D+ +D + E +L EN+ LQ Sbjct: 1473 QRKANLLEAQANKLNIEKNTIDFKEKELKAFKDKVDQDIDSTNKQRKELNELLNENKLLQ 1532 Query: 686 NQL----QYFN--DISANQTEEIKEASDEDKPVEIKK--PRIKKRDFVIQNKDDKLAKL- 736 L + N D N+ E + DK + + + R+K + Q + ++L Sbjct: 1533 QSLIERERAINSKDSLLNKKIETIKRQLHDKEMRVLRLVDRMKLAEQKYQTEINRLRTQT 1592 Query: 737 --SKKERIQAYAERLAKINANE 756 S+K+ I+ + L KIN N+ Sbjct: 1593 FDSEKQDIKNFFPPLFKINGND 1614 >SCER-S28-01-001306 ORFP:YDR285W ZIP1, Chr IV from 1032427-1035054 Length = 875 Score = 76.3 bits (186), Expect = 3e-16 Identities = 117/558 (20%), Positives = 222/558 (39%), Gaps = 88/558 (15%) Query: 259 KENNNDQIFDLEQEIDDLKRRLSEEKSKHLHTKKLQDDLLQENRDLYEQLQNKPVAINPL 318 K N ++ DL Q +RR+S K+ + K +DL + ++ +L K Sbjct: 247 KNNQETKLKDLRQNHQLYQRRISGFKTSIENLNKTINDLGKNKKEADAELMKK------- 299 Query: 319 SDEVNEELENLKQEKALLSDQLDALKNKSSNVQQQLA------LLPVXXXXXXXXXXXXX 372 +E+E LK+E S QL K K+S++ Q++ + + Sbjct: 300 ----GKEIEYLKRELDDCSGQLSEEKIKNSSLIQEMGKNREEMIKSIENFFSEDKAHHLL 355 Query: 373 TAREANQRL-DLVEQE------------NDFLKNELKKLHDNTSNDENEKYDDLLNQYEL 419 + +R+ DL E++ N L+N +L NT ++Y+D+ E Sbjct: 356 QFNKFEERVHDLFEKKLQKHFDVAKDTLNVGLRNTTVELSSNTETMLKQQYEDIKENLEQ 415 Query: 420 LF----DENETKFDKLQVKQQALNLDYQK------------TISALKHENDVLLDEIEWT 463 DE ++L V Q+ L + Q+ +S + + LLD+ T Sbjct: 416 KMSSSKDEMAKTINELSVTQKGLIMGVQEELLTSSGNIQTALVSEMNNTRQELLDDASQT 475 Query: 464 RSKDNDFNN----------TKNSFEEQKKALDEKLNGLTIQNQQL-----------QDKI 502 N N +EE+ K L+ + + L+ Q Q+ +D + Sbjct: 476 AKNYASLENLVKAYKAEIVQSNEYEERIKHLESERSTLSSQKNQIISSLGTKEAQYEDLV 535 Query: 503 AELEEWNEEKSXXXXXXXXXXXXXXKDSQNLFNVAQDKLATLEEVNLALNEKINDLEDEL 562 +LE N E S S L V QD+L L +N+ ++ E+++ Sbjct: 536 KKLEAKNIEISQISGKEQSLTEKNENLSNELKKV-QDQLEKLNNLNITTK---SNYENKI 591 Query: 563 SGSENSNNLLAKLQADHEILQESYGKLKTDFEKLKKNKLNDANEQYQDLLSAFEETNSEL 622 S + N ++ L ++++ L++ +L ++K+N+ D + L AF++ N +L Sbjct: 592 S---SQNEIVKALVSENDTLKQRIQQL----VEIKENEQKD----HTTKLEAFQKNNEQL 640 Query: 623 EKAKQSLSASDSENNQLKQQINSLENA--KKELQFTPVTSDEHL--DELETLKIEKEQLF 678 +K + + +L++Q L+N KKE SD ++ LK EK+ + Sbjct: 641 QKLNVEVVQLKAHELELEEQNRHLKNCLEKKETGVEESLSDVKTLKQQVIVLKSEKQDIT 700 Query: 679 LENQALQNQLQYFNDISANQTEEIKEASD--EDKPVEIKKPRIKKRDFVIQNKDDKLAKL 736 E LQ+ L+ +++ N ++++ E K E+++ + KR+ + K Sbjct: 701 AEKLELQDNLESLEEVTKNLQQKVQSQKRELEQKIKELEEIKNHKRNEPSKKGTQNFTKP 760 Query: 737 SKKERIQAYAERLAKINA 754 S + A L N+ Sbjct: 761 SDSPKKNATTSNLFPNNS 778 >SCER-S28-01-002651 ORFP:YHR023W MYO1, Chr VIII from 151657-157443 Length = 1928 Score = 69.7 bits (169), Expect = 3e-14 Identities = 90/387 (23%), Positives = 167/387 (43%), Gaps = 66/387 (17%) Query: 402 TSND--ENEKYDDLLNQYELLFDENETKFDKLQVKQQALNLDYQKTISALKHENDVLLDE 459 +SND +K+++ +N+ + E E+K L+ K Q KT++ L++ D+L E Sbjct: 856 SSNDMTRTKKFNEQINKLKNDLQEMESKKKFLEEKNQ-------KTVNELENTQDLLNQE 908 Query: 460 IEWTRSKDNDFNNTKNSFEEQKKALDEKLNGLTIQNQQLQDKIAELEEWNEEKSXXXXXX 519 E R ++ N K S E +K Q D ++E +E + EK Sbjct: 909 KENLRKNESLLNRVKTSSETLQK--------------QFDDLVSEKDEISREK----LEV 950 Query: 520 XXXXXXXXKDSQNLFNVAQDKLATLEEVNLALNEKINDLEDELSGSENSNNLLAKLQADH 579 + Q L +++ ATLE+++ NE I + D N ++K Q+ Sbjct: 951 AQNLEEAHQKIQGLQETIREREATLEKLHSKNNELIKQISD-------LNCDISKEQSSQ 1003 Query: 580 EILQESYGKLKTDFEKLKK--NKLNDANEQYQDLLSAFEETNS----ELEK----AKQSL 629 +++ES KL+ + ++LK N + + + D LS+ EE LEK A L Sbjct: 1004 SLIKESKLKLENEIKRLKDVINSKEEEIKSFNDKLSSSEEDLDIKLVTLEKNCNIAMSRL 1063 Query: 630 SASDSENNQLKQQ-----------INSLENAKKELQFTPVTSDEHLDELETLKIEKEQLF 678 + +EN+ L+ + N L+N + EL D H EL T +++ Sbjct: 1064 QSLVTENSDLRSKNENFKKEKAALNNQLKNKESELLKMKEKIDNHKKELATFSKQRDDAV 1123 Query: 679 LENQALQNQLQ----YFNDISANQTEEIKEASDEDKPVEIKKPRIKKRDFVIQNKDDKL- 733 E+ + +L+ + +N + +E S+ + E K+ KKR+ ++++ +D Sbjct: 1124 SEHGKITAELKETRIQLTEYKSNYQKIKEEYSNFQR--ETKEQEQKKRNSLVESLNDSKI 1181 Query: 734 ----AKLSKKERIQAYAERLAKINANE 756 A+LS++ + Y + N+ E Sbjct: 1182 KELEARLSQEISLNQYLNKRISGNSVE 1208 Score = 69.3 bits (168), Expect = 4e-14 Identities = 160/810 (19%), Positives = 331/810 (40%), Gaps = 119/810 (14%) Query: 4 DKELEISDFDNELDE-KTLLKELVQRTNNILFSPSKITAIPFERNLLEKTFFGTVDEAEK 62 +KE E+ ++D K L ++ ++ + KITA L E T ++ Sbjct: 1093 NKESELLKMKEKIDNHKKELATFSKQRDDAVSEHGKITA-----ELKETRIQLTEYKSNY 1147 Query: 63 EKSIVSFFNWMIDLKVLDKKWDKNVLNHYANQLKTREEEQQTVDQTMAFQEVDDQSVLTK 122 +K + N+ + K ++K +N L N K +E E + + Q ++ + ++ + Sbjct: 1148 QKIKEEYSNFQRETKEQEQK-KRNSLVESLNDSKIKELEAR-LSQEISLNQYLNKRISGN 1205 Query: 123 EIKTGFQELKPSVITAEDDKDE---IKPEATKQVSFEELFNQPSEEINETKKPEVQIFST 179 ++T + S ++D D+ IK Q++F E+ EI E K ++ T Sbjct: 1206 SVETNISSTRRSTSYSDDPLDKEDIIKKYYDLQLAFTEITRNLENEIEEKKNLISRLRFT 1265 Query: 180 DKVKEPEQFDDFY---SIENLTKAINPVHKTIQYDQNDDQPF---------VVKRILKEQ 227 + F+D ++ L K I + +I D ++P + K +L+ Sbjct: 1266 ETRLASSSFEDQKIKAQMKKLKKLIQDMDPSIPLDSILNEPLDNCPDKESDINKLMLEVD 1325 Query: 228 HPTKKVD-ELDDYNNKELLLENADLK-KQIDDLKENNNDQIFDLEQEIDDLKRRLSEEKS 285 + +++D E + + E + K ++I ++ I+ L+ E + + + E+K Sbjct: 1326 YLKRQLDIETRAHYDAENAISALHSKFRKIQGESSLSSSDIYKLKFEASEERVKSLEDKL 1385 Query: 286 KHLHTK-----------KLQDDLLQENRDL-YEQLQNKPVAINPLSDEVNEELENL---- 329 K + + K +D + + ++ Y +L+N + + +E N +L L Sbjct: 1386 KTMPLRDRTNLPVGDIIKNRDSISKYEEEIRYYKLEN--YKLQEILNESNGKLSQLTLDL 1443 Query: 330 ---KQEKALLSDQLDALKNKSSNVQQQLALLPVXXXXXXXXXXXXXTAREANQRLDLVEQ 386 K ++ALLS+QLD L+ + ++Q LL T ++ Q+ + Sbjct: 1444 RQSKSKEALLSEQLDRLQKDLESTERQKELL-------------SSTIKQQKQQFE--NC 1488 Query: 387 ENDFLKNELK-KLHDNTSNDENEKYDDLLNQYELLFDENETKFDKL----QVKQQALNLD 441 +D NEL+ + H + E ++ + E L +N+ K +KL ++++ ++ Sbjct: 1489 MDDLQGNELRLREHIHALKQAEEDVKNMASIIEKLKTQNKQK-EKLIWEREMERNDSDMQ 1547 Query: 442 YQKTISALKHENDV---LLDEIEWTRSKDNDFNNTKNSFEEQKKALDEKLNGLTIQNQQL 498 Q+T+ LK DV L D++ + + + + ++ + ++ L E+LN L Sbjct: 1548 LQETLLELKRVQDVKKILSDDLAHLKERLSAVED-RSQYTDEINRLKEELNCSLKAETNL 1606 Query: 499 QDKIAELEEWNEEKSXXXXXXXXXXXXXXKDSQNLFNVAQDKLATLEEVNLALNEKINDL 558 + + A L+ E DS+ + D L L+ + E +N+ Sbjct: 1607 KKEFATLKYKLE--------------TSTNDSEAKIS---DLLKQLDHYTKVV-EMLNNE 1648 Query: 559 EDELSGSENSNNLLAKLQADHEILQESYGKLKTDFEKLKKNKLNDANEQYQDLLSAFEET 618 +D +S +E L + Y L T+ E L K K+ + Q+L S + Sbjct: 1649 KDAISLAEKE-------------LYQKYEALNTECESL-KGKIVSLTKIKQELESDLNQK 1694 Query: 619 NSELEKAKQSLSASDSENNQLKQQINSLENAKK----------ELQFT-PVTSDEHLDEL 667 L+ + +LS+S +N ++ ++I LE + EL T + + + D+ Sbjct: 1695 TDALQISNAALSSSTQKNKEITEKIKYLEETLQLQMEQNSRNGELVKTLQASCNGYKDKF 1754 Query: 668 ETLKIEKEQLFLENQALQNQLQYFNDISANQTEEIKEASDEDKPVEIKKPRIKKRDFVIQ 727 + K + L+ ENQ LQ N Q + + E + +I + + ++ Sbjct: 1755 DDEKQKNIDLYEENQTLQK----LNTDLQLQLKNLHERLSDTTEKNAWLSKIHELENMVS 1810 Query: 728 NKDD-KLAKLSKKERIQAYAERLAKINANE 756 + D K ++ K + ++ E L N+ + Sbjct: 1811 LETDLKYEEMKKNKSLERAVEELQTKNSQQ 1840 Score = 61.6 bits (148), Expect = 8e-12 Identities = 102/533 (19%), Positives = 209/533 (39%), Gaps = 60/533 (11%) Query: 263 NDQIFDLE---QEIDDLKRRLSEEKSKHLHTKKLQDDL-------LQENRDLYEQLQNKP 312 N+QI L+ QE++ K+ L E+ K ++ + DL L++N L +++ Sbjct: 867 NEQINKLKNDLQEMESKKKFLEEKNQKTVNELENTQDLLNQEKENLRKNESLLNRVKTSS 926 Query: 313 VAINPLSDEVNEELENLKQEKALLSDQLDALKNKSSNVQQQL--------ALLPVXXXXX 364 + D++ E + + +EK ++ L+ K +Q+ + L Sbjct: 927 ETLQKQFDDLVSEKDEISREKLEVAQNLEEAHQKIQGLQETIREREATLEKLHSKNNELI 986 Query: 365 XXXXXXXXTAREANQRLDLVEQENDFLKNELKKLHD--NTSNDENEKYDDLLNQYELLFD 422 + L+++ L+NE+K+L D N+ +E + ++D L+ E Sbjct: 987 KQISDLNCDISKEQSSQSLIKESKLKLENEIKRLKDVINSKEEEIKSFNDKLSSSE---- 1042 Query: 423 ENETKFDKLQVKQQALNLDYQKTISALKHENDVLLDEIEWTRSK---DNDFNNTKNSFEE 479 E KL ++ N+ + S + +D+ + + K +N N ++ + Sbjct: 1043 --EDLDIKLVTLEKNCNIAMSRLQSLVTENSDLRSKNENFKKEKAALNNQLKNKESELLK 1100 Query: 480 QKKALDEKLNGLTIQNQQLQDKIAELEEWNEEKSXXXXXXXXXXXXXXKDSQNLFNVAQD 539 K+ +D L ++Q D ++E + E K + N ++ Sbjct: 1101 MKEKIDNHKKELATFSKQRDDAVSEHGKITAELKETRIQLTEYKSNYQKIKEEYSNFQRE 1160 Query: 540 KLATLEEVNLALNEKIND-----LEDELSGSENSNNLLAKLQADHEI-LQESYGKLKTDF 593 ++ +L E +ND LE LS + N L K + + + S + T + Sbjct: 1161 TKEQEQKKRNSLVESLNDSKIKELEARLSQEISLNQYLNKRISGNSVETNISSTRRSTSY 1220 Query: 594 EKLKKNKLNDANEQYQDLLSAFEETNSELEK--------------AKQSLSASDSENNQL 639 +K D ++Y DL AF E LE + L++S E+ ++ Sbjct: 1221 SDDPLDK-EDIIKKYYDLQLAFTEITRNLENEIEEKKNLISRLRFTETRLASSSFEDQKI 1279 Query: 640 KQQINSLENAKKELQ-FTPVTS--DEHLDELETLKIEKEQLFLENQALQNQLQYFNDISA 696 K Q+ L+ +++ P+ S +E LD + + +L LE L+ QL Sbjct: 1280 KAQMKKLKKLIQDMDPSIPLDSILNEPLDNCPDKESDINKLMLEVDYLKRQLDI------ 1333 Query: 697 NQTEEIKEASDEDKPVEIKKPRIKKRDFVIQNKDDKLAKLSKKERIQAYAERL 749 +T +A + + K +I+ + + KL + +ER+++ ++L Sbjct: 1334 -ETRAHYDAENAISALHSKFRKIQGESSLSSSDIYKLKFEASEERVKSLEDKL 1385 >SYNE-PCC-01-000727 sll1120 Length = 1200 Score = 45.8 bits (107), Expect = 5e-07 Identities = 69/361 (19%), Positives = 147/361 (40%), Gaps = 33/361 (9%) Query: 99 EEEQQTVDQTMAFQEVDDQSVLTKEIKTGFQ--ELKPSVITAEDDK--DEIKPEATKQVS 154 +E ++ +D+ E D + V TKE T Q E + +I E ++ + + + K Sbjct: 174 KERREIIDELAGVAEFDRKIVKTKETLTEVQDREERCQIIATELERTLERLAADRQKAEK 233 Query: 155 FEELFNQPSEEINETKKPEVQIFSTDKVKEPEQFD-DFYSIENLTKAINPVHKTIQYDQN 213 ++ L Q E+ K + + + K Q + D + + +A++ + IQ Q Sbjct: 234 YQALRQQVQEKQGWAKVIQYKAVEQQRQKLWGQLERDREQSQQIQQALDQRSQAIQTQQT 293 Query: 214 DDQPFVVKRILKEQHPTKKVDELDDYNNKELLLENADLKKQIDDLKENNND---QIFDLE 270 + + +V L + + + A K Q D L++ ND QI + + Sbjct: 294 ELEKL-----------NAQVKALGEEEQLAVAAQLATQKAQRDQLQQRYNDGDRQITNHQ 342 Query: 271 QEIDDLKRRLSEEKSKHLHTKKLQ-----------DDLLQENRDLYEQLQNKPVAINPLS 319 Q++ ++ +S+ + + LH ++ + + +Q ++ EQL+++ AI S Sbjct: 343 QQVGQIQAEISQSQQQFLHIQQEKSFHNTQTLPQLEAAVQTSQQQLEQLRHQAQAIASAS 402 Query: 320 DEVNEELENLKQEKALLSDQLDALKNKSSNVQQ-QLALLPVXXXXXXXXXXXXXTAREAN 378 + +E L + L D+L +++ + +++ Q LL E Sbjct: 403 EAWVQEQTQLSRTVNQLQDELIPQRSQLAQLEERQQQLLTNLAELTPLLTKVSVELEEKQ 462 Query: 379 QRLDLVEQENDFLKNELKKLHDNTSNDENEKYDDLLNQYELLFD--ENETKFDKLQVKQQ 436 + + L ++++ L + + E E+ Q LL + E + + DKL+ Q Sbjct: 463 FAQGQFNFQGEALTSQIQTLASDLAQLEQERSLLQETQTRLLKEQQEKQRQLDKLEAASQ 522 Query: 437 A 437 A Sbjct: 523 A 523 Score = 43.1 bits (100), Expect = 3e-06 Identities = 73/378 (19%), Positives = 139/378 (36%), Gaps = 58/378 (15%) Query: 241 NKELLLENADLKKQIDDLKENNNDQIFDLEQEIDDLKRRLSEEKSKHLHTKKLQDDLLQE 300 N+ELLLE +Q+ Q+ ++ Q+ ++ LH ++ + D+ + Sbjct: 718 NEELLLERTVRSRQL-------TQQLMEMRQQ----------QREAQLHGEQTERDIAR- 759 Query: 301 NRDLYEQLQNKPVAINPLSDEVNEELENLKQEKALLSDQLDALKNKSSNVQQQLALLPVX 360 L + IN ++L L+Q ALL L L+ + ++ QQQL L Sbjct: 760 -------LSQQQTQINQQQINQQQKLAELQQNLALLQQSLPPLEQQLASAQQQLTALETS 812 Query: 361 XXX---XXXXXXXXXTAREANQRLDLVEQENDFLKNELKKLHDNTSNDENEKYDDLLNQY 417 E ++L + Q D LK DL N Sbjct: 813 QTHQQWQTIQIQIRTVEAEYQRQLQALRQGEDHLK-------------------DLQNSS 853 Query: 418 ELLFDENETKFDKLQVKQQALNLDYQKTISALKHENDVLLDEIEWTRSKDNDFNNTKNSF 477 + L ++ +K+ + QA +L + LK + I+ T ++ + S Sbjct: 854 QRLEEKIAQAQEKI-AQHQAQDLTLAQEQEQLKIALAEMNGAIQTTEAQLAKLSEKLGST 912 Query: 478 EEQKKALDEKLNGLTIQNQQLQ---DKIAELEEWNEEKSXXXXXXXXXXXXXXKDSQNLF 534 ++++ L+ +LN L Q Q+ Q +K+ ++ +E D Sbjct: 913 KQERDRLETQLNQLRSQQQEQQWQWEKLQTNQQEYQENLTQLQTQLEALEQDLPDPWPEI 972 Query: 535 NVAQDKLATLEEVNLALNEKINDLEDELSGSENSNNLLAKLQADHEILQESYGKLKTDFE 594 + QD+ +E NL + +LE + N L ++ + + + Y K + Sbjct: 973 PLLQDR----DEANLDFANILEELERSI---RNGQKRLEAMEPVNMLALQEYEKTEARLG 1025 Query: 595 KLKKNKLNDANEQYQDLL 612 +L + A E+ + LL Sbjct: 1026 ELSEKLQTIAGERTELLL 1043 >SYNE-PCC-01-000943 sll1424 Length = 491 Score = 43.5 bits (101), Expect = 2e-06 Identities = 57/264 (21%), Positives = 108/264 (40%), Gaps = 70/264 (26%) Query: 254 QIDDLKENNNDQIFDLEQEIDDLKRRLSEEKSKHLHTKKLQDDLLQE-----NRDLYEQL 308 Q+DD+ +LEQ + EE L + + L+QE NR+ + L Sbjct: 77 QLDDILAQLRVAKTELEQA-----SQAKEEIESELTAVREEQQLVQERSRELNRNYTKAL 131 Query: 309 QNKPVAINPLSDEVNEELENLKQEKALLSDQLDALKNKSSNVQQQLALLPVXXXXXXXXX 368 Q ++ S + +E+ NL E+A L++Q D+L +SS +Q Q+ L Sbjct: 132 QLLR-RVSEQSRNLRQEVANLSAERAQLNEQKDSLLAESSELQSQVKLRD---------- 180 Query: 369 XXXXTAREANQRLDLVEQENDFLKNELKKLHDNTSNDENEKYDDLLNQYELLFDENETKF 428 +E ++R + + Q+ L + +++ E +F Sbjct: 181 ------QELSKRQERIAQQEKVLARQREQVQSL-----------------------EKRF 211 Query: 429 DKLQVKQQALNLDYQKTISALKHENDVLLDEIEWT-RSKDNDFNNTKNSFEEQKKALDEK 487 L+ ++Q L + ++ D +D+++ +KDND +A +EK Sbjct: 212 ASLEAQRQQLQAEI--------NQRDTKIDQLDQAIAAKDNDI-----------QAREEK 252 Query: 488 LNGLTIQNQQLQDKIAELEEWNEE 511 L GL + LQ ++ ELE + ++ Sbjct: 253 LQGLETELSFLQREVEELERYYQD 276 >MJAN-DSM-01-001277 MJ1254 hypothetical protein Length = 469 Score = 42.4 bits (98), Expect = 5e-06 Identities = 43/182 (23%), Positives = 85/182 (46%), Gaps = 16/182 (8%) Query: 564 GSENSNNLLAKLQADHEILQESYGKLKTDFEKLKKNKLNDANEQYQDLLSAFEETNSELE 623 G+ L K + + E +K + LK NKL + E+ ++L ++ +L Sbjct: 260 GTAIFGGLFVKEKISKRKIIERTKNIKNELTSLK-NKLKEKEEEIKNLAIKIKDLEDKLS 318 Query: 624 KAKQSLSASDSENNQLKQQINSLENAKKELQFTPVTSDEHL---DELETLKIEKEQLFLE 680 KA ++L D + L ++I+ E+ ++L DE++ +++E+L E L E Sbjct: 319 KANKNLLNKDEIISVLNERISEYESQIQKLL------DENIIYKEKIESLNKYIETLKKE 372 Query: 681 NQALQNQLQYFNDISANQTEE----IKEASDEDKPVEIKKPRIKKRDFVIQNKDDKLAKL 736 N L+++++ +DI+ EE + ED+ + I IKK + Q + ++ + Sbjct: 373 NDKLKDKVRELSDIAKKYMEEKRGVLWSFLTEDEKIII--DLIKKHGHITQKEIVEITGM 430 Query: 737 SK 738 SK Sbjct: 431 SK 432 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.306 0.127 0.331 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,271 Number of Sequences: 78 Number of extensions: 5729 Number of successful extensions: 229 Number of sequences better than 1.0e-05: 9 Number of HSP's better than 0.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 54 Number of HSP's gapped (non-prelim): 40 length of query: 756 length of database: 48,235 effective HSP length: 70 effective length of query: 686 effective length of database: 42,775 effective search space: 29343650 effective search space used: 29343650 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (22.0 bits) S2: 96 (41.6 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-000242 sll0396 (224 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-000242 sll0396 440 e-126 SYNE-PCC-01-001437 slr0081 174 2e-46 SYNE-PCC-01-002033 slr0947 159 5e-42 SYNE-PCC-01-002486 slr1584 159 7e-42 SYNE-PCC-01-000518 sll0789 156 6e-41 SYNE-PCC-01-001461 slr0115 151 1e-39 SYNE-PCC-01-000414 sll0649 150 3e-39 SYNE-PCC-01-002672 slr1837 139 1e-35 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 132 9e-34 SYNE-PCC-01-000523 sll0797 130 5e-33 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 128 2e-32 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 112 1e-27 SYNE-PCC-01-000877 sll1330 111 2e-27 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 100 5e-24 SYNE-PCC-01-002086 slr1042 79 1e-17 SYNE-PCC-01-001306 sll1905 75 2e-16 SYNE-PCC-01-002731 slr1909 71 3e-15 SYNE-PCC-01-002221 slr1213 64 3e-13 SYNE-PCC-01-002489 slr1588 63 9e-13 SYNE-PCC-01-002635 slr1783 60 8e-12 SYNE-PCC-01-002788 slr1982 59 2e-11 SYNE-PCC-01-002618 slr1760 59 2e-11 SYNE-PCC-01-001133 sll1673 59 2e-11 HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator pr... 54 4e-10 SYNE-PCC-01-001160 sll1708 52 1e-09 SYNE-PCC-01-001132 sll1672 52 2e-09 SYNE-PCC-01-002879 slr2104 52 2e-09 SYNE-PCC-01-000608 sll0921 49 1e-08 SYNE-PCC-01-001075 sll1592 49 2e-08 SYNE-PCC-01-000800 sll1228 48 3e-08 SYNE-PCC-01-002873 slr2098 47 4e-08 SYNE-PCC-01-002617 slr1759 46 1e-07 SYNE-PCC-01-002778 slr1969 40 5e-06 SYNE-PCC-01-001575 slr0312 40 5e-06 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 440 bits (1131), Expect = e-126 Identities = 224/224 (100%), Positives = 224/224 (100%) Query: 1 MSHRVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMS 60 MSHRVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMS Sbjct: 1 MSHRVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMS 60 Query: 61 GLELCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRR 120 GLELCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRR Sbjct: 61 GLELCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRR 120 Query: 121 THTTSDEVLQFADLRFNRSTREIQRGDRLIDLTAKEFELLDYLLSHARQVLTREQILERV 180 THTTSDEVLQFADLRFNRSTREIQRGDRLIDLTAKEFELLDYLLSHARQVLTREQILERV Sbjct: 121 THTTSDEVLQFADLRFNRSTREIQRGDRLIDLTAKEFELLDYLLSHARQVLTREQILERV 180 Query: 181 WGYDFMGDSNIIEVYIRYLRLKLEAAGEPRLIQTVRGVGYVLRD 224 WGYDFMGDSNIIEVYIRYLRLKLEAAGEPRLIQTVRGVGYVLRD Sbjct: 181 WGYDFMGDSNIIEVYIRYLRLKLEAAGEPRLIQTVRGVGYVLRD 224 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 174 bits (441), Expect = 2e-46 Identities = 96/231 (41%), Positives = 137/231 (59%), Gaps = 13/231 (5%) Query: 2 SHRVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPD-------LIIVNG 54 SHR+LVVE+E + + L L+ EGY+V DG QEF D LII++ Sbjct: 30 SHRILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDI 89 Query: 55 ALPGMSGLELCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARI 114 LP ++GL++CR LR G PI++++AK E+V GL+ GADDYI KPF+ E AR Sbjct: 90 MLPQVNGLDVCRSLRFGGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARC 149 Query: 115 RVQLRRTHTTSDEVLQFADLR----FNRSTREIQRGDRLIDLTAKEFELLDYLLSHARQV 170 R +RR + + F R + + R + RG+ + L KEF LL+ +S+ R+V Sbjct: 150 RAMIRRQGLAGNNIAPFRKFRDLVLYPQECRVLMRGEE-VSLAPKEFRLLELFMSYPRRV 208 Query: 171 LTREQILERVWGYDFMGDSNIIEVYIRYLRLKLEA-AGEPRLIQTVRGVGY 220 +REQ++E +WG DFMGDS ++V+IR+LR KLE +P + TVRG GY Sbjct: 209 WSREQLIEHIWGIDFMGDSKTVDVHIRWLREKLEQDPSQPEYLVTVRGFGY 259 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 159 bits (403), Expect = 5e-42 Identities = 90/226 (39%), Positives = 134/226 (59%), Gaps = 10/226 (4%) Query: 7 VVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLELCR 66 +V++E + R +E L GY+V A DG + E PDL++++ +P + G +C+ Sbjct: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 Query: 67 RLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRRTHTT-- 124 LR+ S IPII++TA DV +R+ GL+ GADDY+VKPF+ E ARIR LRR Sbjct: 61 ELRKE-SDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKNGM 119 Query: 125 ----SDEVLQFADLRFNRSTREIQRGDRLIDLTAKEFELLDYLLSHARQVLTREQILERV 180 S VLQ A +R + + R++ +GD I LT EF LL+ L+S + + +R +IL+ V Sbjct: 120 PGIPSSGVLQIATIRIDTNKRQVYKGDERIRLTGMEFSLLELLVSRSGEPFSRSEILQEV 179 Query: 181 WGY--DFMGDSNIIEVYIRYLRLKLEA-AGEPRLIQTVRGVGYVLR 223 WGY + D+ +++V+I LR KLE P LI T RG GY+ + Sbjct: 180 WGYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGYLFQ 225 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 159 bits (402), Expect = 7e-42 Identities = 81/220 (36%), Positives = 136/220 (61%), Gaps = 1/220 (0%) Query: 4 RVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLE 63 R+L+VE++ LA + L + Y V +A D + A DL+I++ LP + G+ Sbjct: 2 RILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGIT 61 Query: 64 LCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRRTHT 123 LC++ R +PI+++TA+D + +++ GLDAGADDY+VKP + E FAR+R LRR Sbjct: 62 LCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRRGCA 121 Query: 124 TSDEVLQFADLRFNRSTREIQRGDRLIDLTAKEFELLDYLLSHARQVLTREQILERVWGY 183 T VL++ +R + ST E+ + ++ LT KE+ +L+ LL + R+VL+R I++ +W Sbjct: 122 TCQPVLEWGPIRLDPSTYEVSYDNEVLSLTRKEYSILELLLRNGRRVLSRSMIIDSIWKL 181 Query: 184 DFMGDSNIIEVYIRYLRLKLEAAG-EPRLIQTVRGVGYVL 222 + + + ++V++R LR KL++AG I+TV G+GY L Sbjct: 182 ESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGYRL 221 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 156 bits (394), Expect = 6e-41 Identities = 87/220 (39%), Positives = 129/220 (58%), Gaps = 3/220 (1%) Query: 4 RVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQE--FPPDLIIVNGALPGMSG 61 R+L+VE+E L +E L+ E Y V +DG ++ + L I + +PG+SG Sbjct: 2 RLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSG 61 Query: 62 LELCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRRT 121 LELC++LR S +PI+++TAKD + +RV GLDAGADDY++KPF E AR+R RR+ Sbjct: 62 LELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAELLARLRSLQRRS 121 Query: 122 HTTSDEVLQFADLRFNRSTREIQRGDRL-IDLTAKEFELLDYLLSHARQVLTREQILERV 180 + LQ + T + ++ I LTAKEF+LL+Y + H +Q+L+ EQI ++ Sbjct: 122 PELQPQQLQVGQWWLDYGTFAVVTPEQARITLTAKEFQLLEYFMKHPQQILSSEQIKNQL 181 Query: 181 WGYDFMGDSNIIEVYIRYLRLKLEAAGEPRLIQTVRGVGY 220 W SN++ +R LR KLE LI+TV G+GY Sbjct: 182 WALSAESTSNVVAAQVRLLRRKLEEYSHGNLIETVYGLGY 221 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 151 bits (382), Expect = 1e-39 Identities = 87/227 (38%), Positives = 129/227 (56%), Gaps = 8/227 (3%) Query: 4 RVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLE 63 R+L+++++ ++ + + L+ GYDV A DG+KG A + PDLI+++ LP + G Sbjct: 3 RILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFT 62 Query: 64 LCRRLR--EMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRRT 121 +C+RLR E + IP++++TA +++++ G D+GADDY+ KPF+ +E AR+R LRRT Sbjct: 63 VCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLRRT 122 Query: 122 H-----TTSDEVLQFADLRFNRSTREIQRGDRLIDLTAKEFELLDYLLSHARQVLTREQI 176 E+L L E + I LT EFELL LL Q ++ I Sbjct: 123 DRIPQAAKHSEILNQGPLTLVPERFEAIWFGKSIKLTHLEFELLHCLLQRHGQTVSPSDI 182 Query: 177 LERVWGYDFMGDSNIIEVYIRYLRLKLEA-AGEPRLIQTVRGVGYVL 222 L VWGY+ D I V+IR+LR KLE PR I+TV G GY L Sbjct: 183 LREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTVYGAGYCL 229 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 150 bits (379), Expect = 3e-39 Identities = 89/232 (38%), Positives = 139/232 (59%), Gaps = 14/232 (6%) Query: 5 VLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLEL 64 +L+VE+++++A+ + L+ E + V DG G QE PDLI+++ LP + GLE+ Sbjct: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLEV 73 Query: 65 CRRLREM-GSRIP-IILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRRTH 122 C R+R+ GS+ P I+++TAK + +R++GL GADDY+VKPF+ E AR+R LRR Sbjct: 74 CTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRALLRRQL 133 Query: 123 TTSDEVLQF-------ADLRFNRSTREIQRGDRL--IDLTAKEFELLDYLLSHARQVLTR 173 V Q DL ++++R +GDR ++LT EF LL +S+ +V R Sbjct: 134 RQGQPVGQIYRTNHFQVDLDQHQASR--YQGDRQEELELTGLEFNLLATFMSYPGRVWNR 191 Query: 174 EQILERVWGYDFMGDSNIIEVYIRYLRLKLEA-AGEPRLIQTVRGVGYVLRD 224 Q++E++WG DF GD +++ +IR LR K+E P I+TV G+GY D Sbjct: 192 TQLIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGYKFED 243 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 139 bits (349), Expect = 1e-35 Identities = 79/226 (34%), Positives = 124/226 (54%), Gaps = 10/226 (4%) Query: 5 VLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLEL 64 +L+V++E L + L ++G+ + VA G G A DL+I++ LP +SGLE+ Sbjct: 4 ILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGLEI 63 Query: 65 CRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRR---- 120 CR++R +G P++ +TAKD +++RV GLDAG DDY++KPF E AR+R LRR Sbjct: 64 CRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFELRELLARVRALLRRQSHG 123 Query: 121 ---THT---TSDEVLQFADLRFNRSTREIQRGDRLIDLTAKEFELLDYLLSHARQVLTRE 174 T T + +L ++ + + + + I L+ KE LL L Q+L+ E Sbjct: 124 ETITETLGAVKNNLLSVNNVSLDVANQVAYCQGQRIALSEKEVALLTLFLQAPGQILSHE 183 Query: 175 QILERVWGYDFMGDSNIIEVYIRYLRLKLEAAGEPRLIQTVRGVGY 220 +I +W + SN++ +R LR K+E PRLI +V G GY Sbjct: 184 EIYSHLWPGESPPSSNVLAALVRLLRRKIEQPNAPRLINSVYGKGY 229 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 132 bits (332), Expect = 9e-34 Identities = 77/222 (34%), Positives = 124/222 (55%), Gaps = 3/222 (1%) Query: 1 MSHRVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMS 60 M+ ++L+VE+E + + L L + YDV A D + +E P LI+++ LPG S Sbjct: 1 MTRKILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKE-NPKLILLDWMLPGRS 59 Query: 61 GLELCRRLREMGS--RIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQL 118 G++ + +++ S IPII++TAK E+ + L+AGADDYI KPF+ ARI Sbjct: 60 GIQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVW 119 Query: 119 RRTHTTSDEVLQFADLRFNRSTREIQRGDRLIDLTAKEFELLDYLLSHARQVLTREQILE 178 RR + + +Q +L + + + + + I+L++ EF+LL + + H +V +REQ+L Sbjct: 120 RRIYEQQSQFIQIDELSIDENAQRVFFQQQEINLSSTEFKLLHFFMRHPEKVYSREQLLN 179 Query: 179 RVWGYDFMGDSNIIEVYIRYLRLKLEAAGEPRLIQTVRGVGY 220 R+W D + ++ YIR LR L IQTVRG GY Sbjct: 180 RIWHNDLEVEYRTVDSYIRRLRRNLAPFQCEHYIQTVRGSGY 221 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 130 bits (326), Expect = 5e-33 Identities = 77/227 (33%), Positives = 124/227 (54%), Gaps = 10/227 (4%) Query: 4 RVLVVEEEEKLARFMELELKYEGYDVSVARDGLKG--FTQAQEFPPDLIIVNGALPGMSG 61 R+L+VE+E L ++ L E Y V DG + + + Q L IV+ LPG+SG Sbjct: 2 RILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSG 61 Query: 62 LELCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRRT 121 LELC++LR G+ +P++++TA + E RV GLDAGADDY+ KPF E AR+R RR+ Sbjct: 62 LELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAELLARLRALQRRS 121 Query: 122 HTTSDEVLQFADLRFNRS--------TREIQRGDRLIDLTAKEFELLDYLLSHARQVLTR 173 ++L + + S + + + I LT +EF++ YL+ + ++++ Sbjct: 122 PQFQPQILTLGNFSLDPSNNLLSVTISEPLNLERQEIALTVREFQIFQYLMQNPERIISG 181 Query: 174 EQILERVWGYDFMGDSNIIEVYIRYLRLKLEAAGEPRLIQTVRGVGY 220 +I +++W D SN++ +R +R KL P I+TV G GY Sbjct: 182 SKIRQQLWDLDEEPMSNVVAAQMRLIRRKLAQQNCPCPIKTVPGQGY 228 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 128 bits (321), Expect = 2e-32 Identities = 69/219 (31%), Positives = 128/219 (58%), Gaps = 4/219 (1%) Query: 4 RVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLE 63 R+L++E++ + +++ L G+ V DG G P D ++++ LP + GLE Sbjct: 2 RILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLE 61 Query: 64 LCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRRTHT 123 + ++ R +P++++TA+D ++ERV GL +GADDY+ KPF E AR++ +RR + Sbjct: 62 VLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRRYG 121 Query: 124 TSDEVLQFADLRFNRSTREIQRGDRLIDLTAKEFELLDYLLSHARQVLTREQILERVWGY 183 V++ A ++ +++ R + ++ I LT++E++LL+ + + +VL+R I E++ + Sbjct: 122 YHHSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSRSSIEEKLSSW 181 Query: 184 DFMGDSNIIEVYIRYLRLKLEAAGEPRLIQTVRGVGYVL 222 D S ++V+I LR KL + I+TV GVGY L Sbjct: 182 DEEISSGALDVHIYNLRQKL----GKQFIRTVHGVGYAL 216 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 112 bits (279), Expect = 1e-27 Identities = 68/225 (30%), Positives = 127/225 (56%), Gaps = 8/225 (3%) Query: 4 RVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLE 63 ++L+V+++ +L + L+ EG+DV A +GL+ + E L++++ +P ++G+E Sbjct: 3 KLLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKLNE-SYKLVLLDVMMPKLNGIE 61 Query: 64 LCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRRTHT 123 + +R++ S +P++++TA+ + +RV+GL+ GADD + KPFN E ARI+ LRR+ + Sbjct: 62 TLKEIRKV-SNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRRSAS 120 Query: 124 TSDEVLQFADLRFNRSTREIQRG-----DRLIDLTAKEFELLDYLLSHARQVLTREQILE 178 S+ + L F+ T G + ++LT EF++L LL V++RE++ Sbjct: 121 PSNNISNVEILSFDGITLHFSHGIATYNEENLNLTDYEFKILCLLLKSKGNVVSREELSL 180 Query: 179 RVWGYDFMGDSNIIEVYIRYLRLKL-EAAGEPRLIQTVRGVGYVL 222 V ++++I LR KL + +P +T+RG GY L Sbjct: 181 EVMEKPLTPFDRSLDMHISNLRRKLPKRKNKPSWFKTLRGKGYAL 225 >SYNE-PCC-01-000877 sll1330 Length = 250 Score = 111 bits (277), Expect = 2e-27 Identities = 76/222 (34%), Positives = 114/222 (51%), Gaps = 12/222 (5%) Query: 5 VLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEF----PPDLIIVNGALPGMS 60 + VVE L + L+ GY V GF QA++ P L +++ L Sbjct: 6 ISVVEGNPHLRSLLSWHLQQSGYLVQQC----SGFHQARQAFNNQLPTLAVIDSDLTDGD 61 Query: 61 GLELCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRR 120 G+ELCR L + + I +++AKD ++ V GL AGADDY+ KPF EF ARI +RR Sbjct: 62 GIELCRWLYQQHQSM-IFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRR 120 Query: 121 THTTSDE-VLQFADLRFNRSTREIQRGDRLIDLTAKEFELLDYLLSHARQVLTREQILER 179 T + +L + L+ + R ++ +DLT +EF LL L L+R ++L R Sbjct: 121 VRTVAAPLLLDYGVLKIDLVQRRVEYQGNFVDLTPQEFSLLYVLTQAEGSALSRTELLRR 180 Query: 180 VWGYDFMGDSNIIEVYIRYLRLKLEA-AGEPRLIQTVRGVGY 220 W + + + I+ ++ LR K+E +P LIQTVR VGY Sbjct: 181 AWP-EAIDNPRTIDTHVLSLRKKIETDPRQPSLIQTVRNVGY 221 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 100 bits (248), Expect = 5e-24 Identities = 69/226 (30%), Positives = 113/226 (50%), Gaps = 10/226 (4%) Query: 4 RVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLE 63 ++LVVE+E ++ + EGYDV A +G++ +L++++ LPG +GL Sbjct: 5 KILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGLL 64 Query: 64 LCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRRT-- 121 L R LRE S +P+I +T +D+ ++++GL+ GADDY+ KPFN E R R L R Sbjct: 65 LARELREELS-LPLIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHRAMP 123 Query: 122 HTTSDEVLQFADLRFN------RSTREIQRGDRLIDLTAKEFELLDYLLSHARQVLTREQ 175 H + RFN S I + L EF + + + ++ TRE+ Sbjct: 124 HQEKENTFGREFYRFNGWKLDLNSHSLITPEGQEFKLPRSEFRAMLHFCENPGKLQTREE 183 Query: 176 ILERVWGYDFMGDSNIIEVYIRYLRLKLE-AAGEPRLIQTVRGVGY 220 +L+++ G + ++V IR +R E P +I T+ G GY Sbjct: 184 LLKKMTGRELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGY 229 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 79.0 bits (193), Expect = 1e-17 Identities = 40/117 (34%), Positives = 67/117 (57%), Gaps = 2/117 (1%) Query: 5 VLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLEL 64 VL+VE+ + LK G+ V++A DG++ + Q F PDL++++ +P M+G E+ Sbjct: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 Query: 65 CRRLRE--MGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLR 119 CRR++ +P+I+ ++K + +R G+ GAD YI KPF E I+ LR Sbjct: 90 CRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLLR 146 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 74.7 bits (182), Expect = 2e-16 Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 2/124 (1%) Query: 2 SHRVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSG 61 S +LVV++ ++ + L+ EGY + G + + + PDLI+++ +PGM G Sbjct: 17 SFLILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQPDLILLDLMMPGMDG 76 Query: 62 LELCRRLRE--MGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLR 119 LE+C RL++ IP+I +TA ++ ++ + GA DY+ KPF+ E AR++ L Sbjct: 77 LEVCDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVKTHLE 136 Query: 120 RTHT 123 T Sbjct: 137 LKQT 140 Score = 45.1 bits (105), Expect = 2e-07 Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 3/126 (2%) Query: 5 VLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGL-- 62 +L+ E+ + +L LK GY V V +G + + + D+++++ +P M GL Sbjct: 742 ILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTA 801 Query: 63 -ELCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRRT 121 E RR + R II +TA +R L +G +DY+ KP + ++V Sbjct: 802 TEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKPIRLEALQQALQVAATAL 861 Query: 122 HTTSDE 127 +TS + Sbjct: 862 QSTSQD 867 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 71.2 bits (173), Expect = 3e-15 Identities = 48/181 (26%), Positives = 95/181 (52%), Gaps = 8/181 (4%) Query: 2 SHRVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSG 61 ++ +L+V+++ L ++ L+Y+GY V+ A +G + PD+I+ + +P M G Sbjct: 7 NYHLLLVDDDPNLLLLVKDYLEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDG 66 Query: 62 LELCRRLREMG--SRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLR 119 ++R+ S IP++ ++AK RV GL+ GAD Y+ KPF +E A+++ LR Sbjct: 67 YAFIEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLR 126 Query: 120 RTHTTSDEVLQFADLRFNRSTR-EIQRGDRLIDLTAKEFELLDYLLSHARQVLTREQILE 178 + +D +LQ + + R ++ R L K +L+ L++ R++ ++ + Sbjct: 127 Q----ADRLLQHNNHPLEDNARVQVARDVELTPTETKVIQLVAQGLAN-REIADHLKVSQ 181 Query: 179 R 179 R Sbjct: 182 R 182 >SYNE-PCC-01-002221 slr1213 Length = 241 Score = 64.3 bits (155), Expect = 3e-13 Identities = 35/120 (29%), Positives = 67/120 (55%), Gaps = 3/120 (2%) Query: 1 MSHRVLVVEEEEKLARFMELELKYEGYDVSV-ARDGLKGFTQAQEFPPDLIIVNGALPG- 58 M ++L+VE+E +A+ + LK +GY++ V A DG + EF PDL++++ + G Sbjct: 1 MVTKILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGE 60 Query: 59 MSGLELCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQL 118 + G+E+ R++ + S IPI+ +TA D E Y++KPF ++ + + + + Sbjct: 61 IDGIEVAERIKSLYS-IPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTVAIAI 119 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 62.8 bits (151), Expect = 9e-13 Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 4/120 (3%) Query: 5 VLVVEEEEKLARFMELELKYEGYDVSVARDGLK--GFTQAQEFPPDLIIVNGALPGMSGL 62 +LVVE+E + + L E Y + A +G G + E PDLII + +P M G Sbjct: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 Query: 63 ELCRRLREMG--SRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRR 120 L L++ + IP I +TA +++ G+++GADDY++KPF ++ + +L++ Sbjct: 64 GLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSRLQK 123 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 59.7 bits (143), Expect = 8e-12 Identities = 36/134 (26%), Positives = 70/134 (52%), Gaps = 3/134 (2%) Query: 5 VLVVEEEEKLARFMELELKYEG-YDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLE 63 +L+V++E + ++ L+ G + V +A + + + Q P L+I + +P + G + Sbjct: 58 LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGYQ 117 Query: 64 LCRRLREMG--SRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRRT 121 ++LRE +P++ +TA+ +R+ G G D ++ KPF+ DE A +R L R Sbjct: 118 FLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLARQ 177 Query: 122 HTTSDEVLQFADLR 135 +SD + A L+ Sbjct: 178 QASSDAGSESAKLQ 191 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 58.5 bits (140), Expect = 2e-11 Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 2/103 (1%) Query: 4 RVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLE 63 +VL+VE+ E + L +GY+V +A DG + T A P LI+++ +LP + G Sbjct: 6 KVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGWT 65 Query: 64 LCRRLR--EMGSRIPIILITAKDDVEERVMGLDAGADDYIVKP 104 ++++ G+ IPII +TA +R + AG DDY KP Sbjct: 66 ATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKP 108 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 58.5 bits (140), Expect = 2e-11 Identities = 43/180 (23%), Positives = 91/180 (50%), Gaps = 23/180 (12%) Query: 4 RVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLE 63 ++LVV+++ + + + L+ EG+ V +A +G + T+ E P++++++ +P M G Sbjct: 13 KILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGFA 72 Query: 64 LCRRLREMGSRIP--IILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRRT 121 C+ L ++ +++IT DD +AGA DY+ KP + +A +R +++R Sbjct: 73 CCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIH----WAVLRQRVKRL 128 Query: 122 HTTSDEVLQFADLRFNRSTREIQRGDRLIDLTAKEFELLDYLLSHARQVLTREQILERVW 181 L NR +++ +++++ AK +L L++ RQ+ E L+ W Sbjct: 129 ------------LYQNRLQHQLESVNQMLERLAKVDQLTQ--LANRRQL---ELFLDTEW 171 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 58.5 bits (140), Expect = 2e-11 Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 2/94 (2%) Query: 26 GYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLELCRRLR--EMGSRIPIILITAK 83 GY V G Q PDLI+++ +P M G ++C ++ E IPII I+A Sbjct: 32 GYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQVCEMIKKEEELQDIPIIFISAL 91 Query: 84 DDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQ 117 D ++V + G DYI KPF +E ARI Q Sbjct: 92 GDTFDKVKAFECGGVDYITKPFQIEEVVARIEGQ 125 >HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator protein (narP) Length = 208 Score = 53.9 bits (128), Expect = 4e-10 Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 23/196 (11%) Query: 4 RVLVVEEEEKLAR----FMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGM 59 +VL++++ + R +EL+ +E V+ G +G + A + PD+II++ + G+ Sbjct: 6 KVLLIDDHPLMRRGIKQLVELDDNFEV--VADVSSGTEGISVALQTSPDVIILDLNMKGL 63 Query: 60 SGLELCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIR---- 115 SGL+ + LR G I+++T D + +DAGAD Y++K D +I+ Sbjct: 64 SGLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRIAQ 123 Query: 116 -----------VQLRRTHTTSDEVLQFADLRFNRSTREIQRGDRLIDLTAKEFELLDYLL 164 + L RTH D L R R+I G + A+ F + + Sbjct: 124 GEVILSDSIKNLLLERTH--EDNPLDSLTDREMGVLRQIATGLSNKQIAAQLFISEETVK 181 Query: 165 SHARQVLTREQILERV 180 H R +L + + RV Sbjct: 182 VHIRNLLRKLNVHSRV 197 >SYNE-PCC-01-001160 sll1708 Length = 226 Score = 52.4 bits (124), Expect = 1e-09 Identities = 30/102 (29%), Positives = 58/102 (56%), Gaps = 2/102 (1%) Query: 4 RVLVVEEEEKLARFMELEL-KYEGYDVSVARD-GLKGFTQAQEFPPDLIIVNGALPGMSG 61 ++L+VE++ + +E L +E +++ D G QA PDLI+++ LPG+ G Sbjct: 18 KILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPGLDG 77 Query: 62 LELCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVK 103 +E +++++ +I I+++T+ E + L +GAD Y VK Sbjct: 78 IEATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVK 119 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 52.0 bits (123), Expect = 2e-09 Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 2/122 (1%) Query: 3 HRVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGL 62 +++LVV+++ + + L G+++ A +G + + + P LI ++ +P M G Sbjct: 630 YKILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGY 689 Query: 63 ELCRRLREM--GSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRR 120 E + ++ G+ ++ +TA EE+ + L AG DD++ KPF + F + L Sbjct: 690 EATKYIKGQVKGNATAVVALTASVLEEEKAIVLSAGCDDFLRKPFRENTIFDSLTKHLGV 749 Query: 121 TH 122 T+ Sbjct: 750 TY 751 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 51.6 bits (122), Expect = 2e-09 Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 2/109 (1%) Query: 5 VLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLEL 64 +L+VE+ E F L +G V VA +G + T D I+++ +P ++G + Sbjct: 720 ILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYDA 779 Query: 65 CRRLR--EMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFF 111 R +R E +PII +TA ++ LDAG +D++ KP D F Sbjct: 780 TRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLF 828 >SYNE-PCC-01-000608 sll0921 Length = 222 Score = 49.3 bits (116), Expect = 1e-08 Identities = 27/104 (25%), Positives = 60/104 (57%), Gaps = 4/104 (3%) Query: 4 RVLVVEEEEKLARFMELELKYE-GYD-VSVARDGLKGFTQAQEFPPDLIIVNGALPGMSG 61 R+ ++E+E+ + + ++ L E ++ V A +G G Q+ PD++I++ LP M+G Sbjct: 5 RIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNG 64 Query: 62 LELCRRLRE--MGSRIPIILITAKDDVEERVMGLDAGADDYIVK 103 +++ ++L++ + + ++++T D E + AGAD Y +K Sbjct: 65 IDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMK 108 >SYNE-PCC-01-001075 sll1592 Length = 226 Score = 48.5 bits (114), Expect = 2e-08 Identities = 31/116 (26%), Positives = 60/116 (51%), Gaps = 2/116 (1%) Query: 2 SHRVLVVEEEEKLARFMELELKYE-GYDVS-VARDGLKGFTQAQEFPPDLIIVNGALPGM 59 S R+L+VE++E + L E G DV+ A DG + D++I++ LPG+ Sbjct: 7 SIRILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPGI 66 Query: 60 SGLELCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIR 115 G+E C +++++ ++P++++T+ ++A A Y VK ++ IR Sbjct: 67 GGIEACHQIKKIHPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLAIR 122 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 47.8 bits (112), Expect = 3e-08 Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%) Query: 2 SHRVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSG 61 + +VLVV++ + + L G+ V A +G + + P +I+++ +P + G Sbjct: 417 NQKVLVVDDRPESRLLLRQLLTSLGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDG 476 Query: 62 LELCRRLRE--MGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQL 118 ++++ G II +TA ER L AG DD++ KPF +E A + L Sbjct: 477 RSTTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIALLAKHL 535 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 47.4 bits (111), Expect = 4e-08 Identities = 30/113 (26%), Positives = 59/113 (52%), Gaps = 2/113 (1%) Query: 4 RVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLE 63 R+L+VE+ E L+ G++V VA +GL + L++++ +P M G+E Sbjct: 926 RILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIE 985 Query: 64 LCRRLREMG--SRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARI 114 +R+ +++PI+ +TA +R L AG +D++ KP +E + ++ Sbjct: 986 ATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEELWNKL 1038 Score = 47.0 bits (110), Expect = 5e-08 Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 7/115 (6%) Query: 4 RVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFT-----QAQEFPPDLIIVNGALPG 58 RVLVV++ + M+ L+ + V G + + P ++ ++ +P Sbjct: 772 RVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPN 831 Query: 59 MSGLELCRRLREMG--SRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFF 111 M GLE+ RRL+ MG + I ++TA E V G DD +VKP + F Sbjct: 832 MDGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISPSVLF 886 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 45.8 bits (107), Expect = 1e-07 Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 3/109 (2%) Query: 4 RVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLE 63 ++L+ E+ + L GY V++A +G + ++ DL++++ +P M G+ Sbjct: 1191 QILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGIT 1250 Query: 64 LCRRLRE---MGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDE 109 CR +R+ + + I+ +TA +R LDAG D YI KP + ++ Sbjct: 1251 ACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQ 1299 >SYNE-PCC-01-002778 slr1969 Length = 750 Score = 40.4 bits (93), Expect = 5e-06 Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 8/115 (6%) Query: 5 VLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMS---- 60 V+V+E++E++A + L Y V D Q + P LIIV+G ++ Sbjct: 632 VIVIEQDEEIATLICELLTVANYQVIWLIDTTNALQQVELLQPGLIIVDGDFVDVTEVTR 691 Query: 61 GLELCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIR 115 G++ RR+ S++ + L++ E G DDY++KP + R++ Sbjct: 692 GIKKSRRI----SKVTVFLLSESLSSAEWQALSQKGIDDYLLKPLQPELLLQRVQ 742 >SYNE-PCC-01-001575 slr0312 Length = 209 Score = 40.4 bits (93), Expect = 5e-06 Identities = 23/87 (26%), Positives = 42/87 (48%) Query: 29 VSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLELCRRLREMGSRIPIILITAKDDVEE 88 ++ A +G + +E PD+ +++ +P + G+ + + II++T D E+ Sbjct: 35 IAQAENGEQAIALFEEHQPDVTLMDLRMPEVEGVAAISAICAIVKFARIIVLTTYDSDED 94 Query: 89 RVMGLDAGADDYIVKPFNSDEFFARIR 115 GL AGA Y++K DE IR Sbjct: 95 IYRGLQAGAKGYLLKETEPDELLNAIR 121 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.324 0.143 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,339 Number of Sequences: 78 Number of extensions: 944 Number of successful extensions: 84 Number of sequences better than 1.0e-05: 34 Number of HSP's better than 0.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 12 Number of HSP's gapped (non-prelim): 38 length of query: 224 length of database: 48,235 effective HSP length: 60 effective length of query: 164 effective length of database: 43,555 effective search space: 7143020 effective search space used: 7143020 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 91 (39.7 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-000295 sll0474 (806 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-000295 sll0474 1490 0.0 SYNE-PCC-01-002879 slr2104 167 2e-43 SYNE-PCC-01-002873 slr2098 163 2e-42 SYNE-PCC-01-000800 sll1228 147 1e-37 SYNE-PCC-01-001280 sll1871 142 3e-36 SYNE-PCC-01-002778 slr1969 137 1e-34 SYNE-PCC-01-002617 slr1759 135 4e-34 SYNE-PCC-01-001509 slr0210 134 1e-33 SYNE-PCC-01-001306 sll1905 134 1e-33 SYNE-PCC-01-000891 sll1353 131 7e-33 SYNE-PCC-01-001294 sll1888 127 2e-31 SYNE-PCC-01-001132 sll1672 124 1e-30 SYNE-PCC-01-000985 sll1475 114 9e-28 SYNE-PCC-01-001517 slr0222 107 2e-25 SYNE-PCC-01-001690 slr0473 79 4e-17 >SYNE-PCC-01-000295 sll0474 Length = 806 Score = 1490 bits (3858), Expect = 0.0 Identities = 764/806 (94%), Positives = 764/806 (94%) Query: 1 MVQEKPRFTRPLRYQLLAGCALILMITSAIAVVLTRQQLQEKSRINIITRAQRLTEGLEF 60 MVQEKPRFTRPLRYQLLAGCALILMITSAIAVVLTRQQLQEKSRINIITRAQRLTEGLEF Sbjct: 1 MVQEKPRFTRPLRYQLLAGCALILMITSAIAVVLTRQQLQEKSRINIITRAQRLTEGLEF 60 Query: 61 AAEGLVETKDVYRLNRLAQNYATWPNVQTISIVDPNGILIAHGGEIKMVRGEKYAQVTPA 120 AAEGLVETKDVYRLNRLAQNYATWPNVQTISIVDPNGILIAHGGEIKMVRGEKYAQVTPA Sbjct: 61 AAEGLVETKDVYRLNRLAQNYATWPNVQTISIVDPNGILIAHGGEIKMVRGEKYAQVTPA 120 Query: 121 LFPIFEQVSISGIPQSLITQIEEEEVVVYALPFNTYSFPEQGESYRDQNSHRRGVAITIL 180 LFPIFEQVSISGIPQSLITQIEEEEVVVYALPFNTYSFPEQGESYRDQNSHRRGVAITIL Sbjct: 121 LFPIFEQVSISGIPQSLITQIEEEEVVVYALPFNTYSFPEQGESYRDQNSHRRGVAITIL 180 Query: 181 SKQELNREVNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLGKLHRALINYDNTEQFN 240 SKQELNREVNQ PLGKLHRALINYDNTEQFN Sbjct: 181 SKQELNREVNQGLLLVVGSFIIGIVVILLLLGLLIRYAVLLPLGKLHRALINYDNTEQFN 240 Query: 241 LPPLPSNEIGFLGQTLVQTFNQLQIYQREALEIAERKYVEIAQRYELASQATRVWVWECQ 300 LPPLPSNEIGFLGQTLVQTFNQLQIYQREALEIAERKYVEIAQRYELASQATRVWVWECQ Sbjct: 241 LPPLPSNEIGFLGQTLVQTFNQLQIYQREALEIAERKYVEIAQRYELASQATRVWVWECQ 300 Query: 301 PKIHYFEVDPNLITWLGFEQPLEPADGDFFIHLGDRPMFWQAIEQSLEDPTMELSTELRL 360 PKIHYFEVDPNLITWLGFEQPLEPADGDFFIHLGDRPMFWQAIEQSLEDPTMELSTELRL Sbjct: 301 PKIHYFEVDPNLITWLGFEQPLEPADGDFFIHLGDRPMFWQAIEQSLEDPTMELSTELRL 360 Query: 361 EAANGEIYHCLLRGQIHQEQGEAFVKIIGTIADITEIKKAEEQLKLSNKILAKATQLKDE 420 EAANGEIYHCLLRGQIHQEQGEAFVKIIGTIADITEIKKAEEQLKLSNKILAKATQLKDE Sbjct: 361 EAANGEIYHCLLRGQIHQEQGEAFVKIIGTIADITEIKKAEEQLKLSNKILAKATQLKDE 420 Query: 421 FLANMSHELRTPLNSILGMIETLQNQVYGPLNGKQVQSLEIVENSGRHXXXXXXXXXXXX 480 FLANMSHELRTPLNSILGMIETLQNQVYGPLNGKQVQSLEIVENSGRH Sbjct: 421 FLANMSHELRTPLNSILGMIETLQNQVYGPLNGKQVQSLEIVENSGRHLLSLINDILDLS 480 Query: 481 KIEAGRMDLDLNPTSVSALVNHSLTFVQQFAIQKQINLSSEIIPNLPDVLVDKRRLCQVL 540 KIEAGRMDLDLNPTSVSALVNHSLTFVQQFAIQKQINLSSEIIPNLPDVLVDKRRLCQVL Sbjct: 481 KIEAGRMDLDLNPTSVSALVNHSLTFVQQFAIQKQINLSSEIIPNLPDVLVDKRRLCQVL 540 Query: 541 INLLNNAIKFTPEGGKVVVQADLIKEQGKENSQSPPQLSFTVFDTGIGIEADRLNNIFEP 600 INLLNNAIKFTPEGGKVVVQADLIKEQGKENSQSPPQLSFTVFDTGIGIEADRLNNIFEP Sbjct: 541 INLLNNAIKFTPEGGKVVVQADLIKEQGKENSQSPPQLSFTVFDTGIGIEADRLNNIFEP 600 Query: 601 FVQIDSALNRRYDGTGLGLSLVKKIVELHGGSVTVTSKLNEGSRFKITIPCVFQDKDGPR 660 FVQIDSALNRRYDGTGLGLSLVKKIVELHGGSVTVTSKLNEGSRFKITIPCVFQDKDGPR Sbjct: 601 FVQIDSALNRRYDGTGLGLSLVKKIVELHGGSVTVTSKLNEGSRFKITIPCVFQDKDGPR 660 Query: 661 HRGQLVEVTNHGSPTPIIITLISKNSAYATTLSSYFRAKGYQMQWLNCLYPTAAELTQLV 720 HRGQLVEVTNHGSPTPIIITLISKNSAYATTLSSYFRAKGYQMQWLNCLYPTAAELTQLV Sbjct: 661 HRGQLVEVTNHGSPTPIIITLISKNSAYATTLSSYFRAKGYQMQWLNCLYPTAAELTQLV 720 Query: 721 KIGDQSCHVLVMDLANTGEEVKDKLDEIRKFFGSSPITIIALVDATEQTKSNIAQLEIAT 780 KIGDQSCHVLVMDLANTGEEVKDKLDEIRKFFGSSPITIIALVDATEQTKSNIAQLEIAT Sbjct: 721 KIGDQSCHVLVMDLANTGEEVKDKLDEIRKFFGSSPITIIALVDATEQTKSNIAQLEIAT 780 Query: 781 NELLVKPVRFHRLMEIVREETCPVPR 806 NELLVKPVRFHRLMEIVREETCPVPR Sbjct: 781 NELLVKPVRFHRLMEIVREETCPVPR 806 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 167 bits (422), Expect = 2e-43 Identities = 136/442 (30%), Positives = 219/442 (49%), Gaps = 58/442 (13%) Query: 258 QTFNQLQIYQREALEIAE-----RKYVEIAQRYELASQATRVWVWECQPKIHYFEVDPNL 312 Q +Q+ E IA +K E RY LA ++ WE + P + Sbjct: 266 QDVETVQLISNEIWRIARSRRLVKKLTESENRYRLAQAIAKIGNWELDYATNVLFWSPEV 325 Query: 313 ITWLGFEQPLEPADGDF-----FIHLGDRPMFWQAIEQSLEDPTMELSTELRLEAANGEI 367 FE + G + IH GDR + +A + L+ RL +G I Sbjct: 326 FNL--FEIAPQDFAGTYEAFLNLIHPGDRELVDEAYQCHLQK-YQPYDIVHRLLMPDGRI 382 Query: 368 YHCLLRGQIHQEQGEAFVKIIGTIADITEIKKAEEQLK---------------------- 405 + + ++ + GTI D+TE+++A+ L+ Sbjct: 383 KYVQEQCNTVFDKNNLPLLSRGTIQDVTELQEAQISLEHLNEKLEQRIQERTQELENSQE 442 Query: 406 --LSNKILAK-ATQLKDEFLANMSHELRTPLNSILGMIETLQNQVYGPLNGKQVQSLEIV 462 L K++A+ AT+ K EFLANMSHE+RTP+N+I+GM E + + L +Q L+ V Sbjct: 443 SLLEAKLVAEGATKAKSEFLANMSHEIRTPMNAIIGMSELV---LQTDLTSQQRNYLQKV 499 Query: 463 ENSGRHXXXXXXXXXXXXKIEAGRMDLDLNPTSVSALVN--HSLTFVQQFAIQKQINLSS 520 + +G K+EAG+++L+ P SV ++ HS+ +Q A K + L+ Sbjct: 500 QYAGELLLGIINNILDFSKMEAGKLELEQKPFSVEEVMGNLHSILGIQAEA--KGLTLNF 557 Query: 521 EIIPNLPDVLV-DKRRLCQVLINLLNNAIKFTPEGGKVVVQADLIKEQGKENSQSPPQLS 579 + P +P +LV D+ RL Q+LINL NNA+KFT +G ++ ++ L+K EN Q+ +L Sbjct: 558 HLDPRIPPILVGDRLRLSQILINLGNNAVKFTNQG-EITIRGQLLKT---ENEQT--KLQ 611 Query: 580 FTVFDTGIGIEADRLNNIFEPFVQIDSALNRRYDGTGLGLSLVKKIVELHGGSVTVTSKL 639 F+V DTGIG+ D+ + +F+ F Q +++ +R+Y GTGLGL++ K + EL GG + + S + Sbjct: 612 FSVTDTGIGLTPDQQSKLFQWFNQGETSTSRQYGGTGLGLAISKSLTELMGGDIWLESVV 671 Query: 640 NEGSRFKITI------PCVFQD 655 +GS F T+ P V QD Sbjct: 672 GQGSTFHFTVCLGTASPAVAQD 693 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 163 bits (412), Expect = 2e-42 Identities = 109/320 (34%), Positives = 169/320 (52%), Gaps = 22/320 (6%) Query: 330 FIHLGDRPMFWQAIEQSLEDPTM---ELSTELRLEAANGEIYHCLLRGQIHQEQGEAFVK 386 ++ LGDR +Q LE+ T S ++ GEI L +G+ Sbjct: 445 YVDLGDR-------QQMLEELTQFGRSQSRVYKMYNPRGEIRDILATFLATDYEGQK--G 495 Query: 387 IIGTIADITEIKKAEEQLKLSNKILAKATQLKDEFLANMSHELRTPLNSILGMIETLQNQ 446 I+G +ADIT IK AE ++K + ++ +A+++K +FLANMSHE+RTP+N+++GM Sbjct: 496 ILGWLADITPIKAAEAEMKRAKELAEEASRIKADFLANMSHEIRTPMNAVIGMTHLALKT 555 Query: 447 VYGPLNGKQVQSLEIVENSGRHXXXXXXXXXXXXKIEAGRMDLDLNPTSVSALVNHSLTF 506 P +Q + L + SG+H KIEAG++ ++ + ++++ T Sbjct: 556 DLTP---RQREYLHKIRFSGQHLLGVINDILDFSKIEAGKLPMESIDFDLDKVLDNVATL 612 Query: 507 VQQFAIQKQINLSSEIIPNLPDVLV-DKRRLCQVLINLLNNAIKFTPEGGKVVVQADLIK 565 + + A K + L +I NLP + D RL Q+LIN NNA+KFT +G +V Sbjct: 613 ISEKATNKGLELLFDIDRNLPRHFIGDPLRLGQILINYANNAVKFTEQGDITIVV----- 667 Query: 566 EQGKENSQSPPQLSFTVFDTGIGIEADRLNNIFEPFVQIDSALNRRYDGTGLGLSLVKKI 625 + +E L V DTGIGI+ + + N+F F Q DS+ R + GTGLGL++ K+I Sbjct: 668 -RLQEYRDQDVVLYLAVKDTGIGIKPEHIANLFNSFQQADSSTTRNFGGTGLGLAICKRI 726 Query: 626 VELHGGSVTVTSKLNEGSRF 645 EL GG V V S+ +GS F Sbjct: 727 AELMGGEVGVESEYGQGSTF 746 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 147 bits (371), Expect = 1e-37 Identities = 98/267 (36%), Positives = 140/267 (52%), Gaps = 6/267 (2%) Query: 386 KIIGTIADITEIK-KAEEQLKLSNKILAKATQLKDEFLANMSHELRTPLNSILGMIETLQ 444 K++G I + + +AE L + + A + K EFLA++SHELRTPLN+I+G + L Sbjct: 130 KLVGQFLAIAQARHQAETTLTQAKEAADAANRAKTEFLASISHELRTPLNAIIGFSQLLH 189 Query: 445 NQVYGPLNGKQVQSLEIVENSGRHXXXXXXXXXXXXKIEAGRMDLDLNPTSVSALVNHSL 504 P +L+I+ SG H KIEAGR L+ L+++ Sbjct: 190 RD---PSLAPHRPTLDIINRSGEHLLELINDILEMSKIEAGRTTLNEKIIDCHRLLDNLQ 246 Query: 505 TFVQQFAIQKQINLSSEIIPNLPD-VLVDKRRLCQVLINLLNNAIKFTPEGGKVVVQADL 563 Q A +KQ+ L E P +P+ + D +L QVLINLL NAIKFT +GG + L Sbjct: 247 ALFQLRAQEKQLLLKVERSPEVPEWIKTDGGKLRQVLINLLANAIKFTAQGGVTLKVKCL 306 Query: 564 IKEQGKENSQSPPQLSFTVFDTGIGIEADRLNNIFEPFVQIDSALNRRYDGTGLGLSLVK 623 Q E + L F V DTG GI A ++ +F PF Q ++ L + G GLGL + + Sbjct: 307 TAPQTDEGQGASIWLHFLVSDTGPGIAAHEMDELFVPFAQTETGL-KSCQGNGLGLPISQ 365 Query: 624 KIVELHGGSVTVTSKLNEGSRFKITIP 650 K V+L GG + V SK+++GS F IP Sbjct: 366 KFVQLMGGQIQVRSKVDQGSAFFFAIP 392 >SYNE-PCC-01-001280 sll1871 Length = 674 Score = 142 bits (359), Expect = 3e-36 Identities = 89/255 (34%), Positives = 137/255 (53%), Gaps = 7/255 (2%) Query: 396 EIKKAEEQLKLSNKILAKATQLKDEFLANMSHELRTPLNSILGMIETLQNQVYGPLNGKQ 455 E++ + L+L++ A K FLANMSHELRTPLN+I+G E L + + + Sbjct: 416 ELENTVKALELASSEAEAANATKSIFLANMSHELRTPLNAIIGYSEMLIEEAEDLDSEEL 475 Query: 456 VQSLEIVENSGRHXXXXXXXXXXXXKIEAGRMDLDLNPTSVSALVNHSLTFVQQFAIQKQ 515 V L+ + SG+ KIEAG+M+L L ++ L+ L + Sbjct: 476 VPDLDKILRSGKSLLALINDLLDISKIEAGKMELYLETFNLKELIAGILDTISPLLKNNN 535 Query: 516 INLSSEIIPNLPDVLVDKRRLCQVLINLLNNAIKFTPEGGKVVVQADLIKEQGKENSQSP 575 L EI +V D +L Q ++NLL+NA KFT +G I E+ K + + Sbjct: 536 NKLEVEISLESEEVYGDLIKLRQGILNLLSNASKFTKDG-----IISFIVEEFKVDEKD- 589 Query: 576 PQLSFTVFDTGIGIEADRLNNIFEPFVQIDSALNRRYDGTGLGLSLVKKIVELHGGSVTV 635 LSF V DTGIG+ ++++ +F+PF Q DS+ R+Y GTGLGL++ +K ++ GG + + Sbjct: 590 -WLSFQVKDTGIGLTEEQMSKLFQPFTQADSSTTRKYGGTGLGLAITRKFCQMMGGDIYL 648 Query: 636 TSKLNEGSRFKITIP 650 TS++ GS F I +P Sbjct: 649 TSEIGVGSSFTIKLP 663 >SYNE-PCC-01-002778 slr1969 Length = 750 Score = 137 bits (345), Expect = 1e-34 Identities = 100/318 (31%), Positives = 157/318 (49%), Gaps = 20/318 (6%) Query: 396 EIKKAEEQLKLSNKILAK--ATQLKDEFLANMSHELRTPLNSILGMIETLQNQVYGPLN- 452 E + E +L + ++A A LK +F+ N+SHELRTPL SI+G+ TL P + Sbjct: 355 EKRVIERTKELRDTLMAAQAANLLKSQFINNISHELRTPLTSIIGLSATLLRWFDHPASL 414 Query: 453 --GKQVQSLEIVENSGRHXXXXXXXXXXXXKIEAGRMDLDLNPTSVSALVNHSLTFVQQF 510 KQ L ++ +G+ ++E+G+ L+ S+ L + + Sbjct: 415 PPAKQQYYLLNIQENGKKLLDQINSIIQLSQLESGQTALNCQSFSLHTLAQTVIHSLLGV 474 Query: 511 AIQKQINLSSEIIPNL--PDVLVDKRRLCQVLINLLNNAIKFTPEGGKVVVQADLIKEQG 568 AI++QINL + N+ D+ RL Q+L LLNNA+KFTP G V+++ Sbjct: 475 AIKQQINLELDYQINVGQDQFCADQERLDQILTQLLNNALKFTPAEGTVILRI------W 528 Query: 569 KENSQSPPQLSFTVFDTGIGIEADRLNNIFEPFVQIDSALNRRYDGTGLGLSLVKKIVEL 628 KE++Q+ F V DTGIGI +L +FE F + Y+ G+GL+L K++VEL Sbjct: 529 KESNQA----IFQVEDTGIGINEQQLPVLFEAFKVAGDSYTSFYETGGVGLALTKQLVEL 584 Query: 629 HGGSVTVTSKLNEGSRFKITIPCVFQDKDGPRHRGQLVEVTNHGSPTPIIITLISKNSAY 688 HGG + V S +G+ F IP Q P +GQ+ + + P + +I ++ Sbjct: 585 HGGYIEVESSPGQGTIFTTVIP---QQNFPPTTKGQVQDKLDAAMPFNSSVIVIEQDEEI 641 Query: 689 ATTLSSYFRAKGYQMQWL 706 AT + YQ+ WL Sbjct: 642 ATLICELLTVANYQVIWL 659 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 135 bits (341), Expect = 4e-34 Identities = 101/336 (30%), Positives = 163/336 (48%), Gaps = 40/336 (11%) Query: 325 ADGDFFIHLGDRPMFWQAIEQSLEDPTMELSTELRLEAANGEIYHCLLRGQIHQEQGEAF 384 A+G +H DR W A E L LEA ++ L + + +++ E Sbjct: 707 ANGIIALHQCDRQRVWTADEIEL------------LEAIAEQMGIALAQAALLEKERERR 754 Query: 385 VKIIGTIADITEIKKAEEQLKLSNKILAKATQLKDEFLANMSHELRTPLNSILGMIETLQ 444 E+ + +L+ + A + K EFLA MSHE+RTP+N ++GM E L Sbjct: 755 ----------RELAQKNLELEKATWAAEAANRAKGEFLAMMSHEIRTPMNGVIGMTELL- 803 Query: 445 NQVYGPLNGKQVQSLEIVENSGRHXXXXXXXXXXXXKIEAGRMDLDLNPTSVSALVNHSL 504 + LN +Q+ ++ + SG KIEA ++ L+ + L+ L Sbjct: 804 --IMTDLNLQQLDYVQTIRQSGETLLTIINDILDFSKIEADKLVLETQAFELRPLIETVL 861 Query: 505 TFVQQFAIQKQINLSSEIIPNLPD-VLVDKRRLCQVLINLLNNAIKFTPEGGKVVVQADL 563 A K + L+ I P P +L D+ RL Q+L NL+ NA+KFT +G V+ Sbjct: 862 EMFGPIARAKHLELTYGIDPQTPARILGDQVRLRQILSNLIGNALKFTEKGEVVLT---- 917 Query: 564 IKEQGKENSQS----------PPQLSFTVFDTGIGIEADRLNNIFEPFVQIDSALNRRYD 613 +K + + ++S ++ F + DTGIGI DR + +F+ F Q+DS+ R+Y Sbjct: 918 VKGEPFDPAESYHTILNLPHPSHRICFNLRDTGIGIPLDRQDRLFKSFSQVDSSTTRKYG 977 Query: 614 GTGLGLSLVKKIVELHGGSVTVTSKLNEGSRFKITI 649 GTGLGL + +++ ++ GG +TVTS+ GS F+ I Sbjct: 978 GTGLGLVISQRLTQMMGGVLTVTSEPGVGSNFRFCI 1013 >SYNE-PCC-01-001509 slr0210 Length = 417 Score = 134 bits (336), Expect = 1e-33 Identities = 82/229 (35%), Positives = 124/229 (54%), Gaps = 11/229 (4%) Query: 422 LANMSHELRTPLNSILGMIETLQNQVYGPLNGKQVQSLEIVENSGRHXXXXXXXXXXXXK 481 L+++ HE RTPL +I+G L++++YG LN KQ Q ++ NS H K Sbjct: 190 LSHIHHEFRTPLTAIIGFARMLRDELYGKLNPKQHQYVQGTLNSAEHLLSLVNDFLDLSK 249 Query: 482 IEAGRMDLDLNPTSVSALVNHSLTFVQQFAIQKQINLSSEIIPNLPDVLVDKRRLCQVLI 541 I+A +L +V L ++ VQ A +KQ+ L+ I + VD+RR Q+LI Sbjct: 250 IDARCEELFYEQVAVEDLCLAVISMVQTKAKEKQLALNLTIDDGVDFCYVDQRRWKQILI 309 Query: 542 NLLNNAIKFTPEGGKVVVQADLIKEQGKENSQSPPQLSFTVFDTGIGIEADRLNNIFEPF 601 NLL+N +KFTP+G + +K K L F+V DTGIGI+ + ++F+PF Sbjct: 310 NLLSNGVKFTPKGSVTLA----VKATDK-------ALIFSVIDTGIGIDPEDQRDLFQPF 358 Query: 602 VQIDSALNRRYDGTGLGLSLVKKIVELHGGSVTVTSKLNEGSRFKITIP 650 QI + GTGLGL+L +++ +LHGG + +TS GS F +P Sbjct: 359 KQISHPPSFAEKGTGLGLALSRRLAQLHGGDIQLTSTPGVGSCFSAILP 407 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 134 bits (336), Expect = 1e-33 Identities = 86/248 (34%), Positives = 134/248 (54%), Gaps = 15/248 (6%) Query: 398 KKAEEQLKLSNKILAKAT-------QLKDEFLANMSHELRTPLNSILGMIETLQNQVYGP 450 ++ +QL N+ L AT + K EFLA MSHE+RTP+N+I+GM L + Sbjct: 294 RRMRQQLAEQNQELVAATTAAEAANRSKSEFLATMSHEIRTPMNAIIGMTGLLLDT---D 350 Query: 451 LNGKQVQSLEIVENSGRHXXXXXXXXXXXXKIEAGRMDLDLNPTSVSALVNHSLTFVQQF 510 L +Q + + NSG KIEAG++DL++ P + + +L V Sbjct: 351 LTTQQKYFAQTIRNSGETLLTLINDILDFSKIEAGKLDLEVYPFDLGQCLEEALDVVVPS 410 Query: 511 AIQKQINLSSEII-PNLPDVLVDKRRLCQVLINLLNNAIKFTPEGGKVVVQADLIKEQGK 569 A QK + L + P P++ D RL Q+L+NLL+NA+KFT E G+V V +++ Sbjct: 411 ARQKSLTLIRRFLTPIPPNLQGDVTRLRQILVNLLSNAVKFT-EAGQVKVTVEVVDHDAA 469 Query: 570 ENSQSPPQLSFTVFDTGIGIEADRLNNIFEPFVQIDSALNRRYDGTGLGLSLVKKIVELH 629 + Q+ F V DTGIGI ++ +F+ F Q +S++ RR+ GTGLGL++ ++ L Sbjct: 470 KGEY---QICFAVQDTGIGIAPNQQQALFQAFSQGNSSITRRFGGTGLGLAICVRLTALM 526 Query: 630 GGSVTVTS 637 GG++ S Sbjct: 527 GGTIWAES 534 >SYNE-PCC-01-000891 sll1353 Length = 998 Score = 131 bits (330), Expect = 7e-33 Identities = 86/264 (32%), Positives = 137/264 (51%), Gaps = 11/264 (4%) Query: 393 DITEIKKAEEQLKLSNKILAKATQLKDEFLANMSHELRTPLNSILGMIETLQNQVYGPLN 452 +I E ++ E +L+ + + A ++K EFLAN+SHE+RTP+N+ILG + L + Sbjct: 575 EIEERQRIEIKLREAKESAELANRVKSEFLANISHEIRTPMNAILGFCDLLLQKDLSLSQ 634 Query: 453 GKQVQSLEIVENSGRHXXXXXXXXXXXXKIEAGRMDLDLNPTSVSALVNHSLTFVQQFAI 512 K+ L + +S + KIEAG++ + L P + ++ A Sbjct: 635 TKKY--LNAIGSSSKILLALIDDILDISKIEAGKLVIHLEPVDLRVIIREIKQIFDYKAE 692 Query: 513 QKQINLSSEIIPNLPDVLV-DKRRLCQVLINLLNNAIKFTPEGGKVV---VQADLIKEQG 568 K + L+ +I L + D RL Q+L NL+ NA+KFT EG + V+ ++ QG Sbjct: 693 SKSLLLTIQIDETLNQAIYFDAVRLRQILFNLVGNALKFTEEGQVFIYIGVEGIQVRSQG 752 Query: 569 KENSQSPPQLSFTVFDTGIGIEADRLNNIFEPFVQIDSALNRRYDGTGLGLSLVKKIVEL 628 S L+ V DTGIGI + IF+ F Q R+Y GTGLGL++ +++ L Sbjct: 753 TYIS-----LAIEVTDTGIGIAPEDQAKIFDVFTQSQGQSTRKYGGTGLGLTITRRLTAL 807 Query: 629 HGGSVTVTSKLNEGSRFKITIPCV 652 GG ++++S+L EGS F + P V Sbjct: 808 LGGEISLSSRLGEGSTFILHFPAV 831 >SYNE-PCC-01-001294 sll1888 Length = 432 Score = 127 bits (318), Expect = 2e-31 Identities = 84/256 (32%), Positives = 137/256 (53%), Gaps = 5/256 (1%) Query: 402 EQLKLSNKILAKATQLKDEFLANMSHELRTPLNSILGMIETLQNQVYGPLNGKQVQSLEI 461 ++L + K +A++LK EFLA+ +HELRTPLN I+G + + + + ++ + +E Sbjct: 178 QELTQATKAAEEASRLKSEFLASTTHELRTPLNGIIGFLRLILDDM-ADSEAEKHEFVEE 236 Query: 462 VENSGRHXXXXXXXXXXXXKIEAGRMDLDLNPTSVSALVNHSLTFVQQFAIQKQINLSSE 521 S KIEAGR+ ++L S ++ + F A K ++ + Sbjct: 237 AYQSALLLLNLINDILDLAKIEAGRVGIELEVVDFSEVLQATENFALPQAQNKGLSFNLT 296 Query: 522 IIPNLPDVLV--DKRRLCQVLINLLNNAIKFTPEGGKVVVQADLIKEQGKENSQSPPQLS 579 PN +LV ++R L QV++N++ NAIKFT EGG V + + E Q P L Sbjct: 297 A-PNQGPLLVYGNQRWLLQVMLNIVGNAIKFTHEGGITVAVEVMPRTVLWEGVQKPGLLK 355 Query: 580 FTVFDTGIGIEADRLNNIFEPFVQIDSALNRRYDGTGLGLSLVKKIVELHGGSVTVTSKL 639 +V DTGIG+ ++ + +F+ FVQID + ++ Y GTGLGL + +K+VE GG V S + Sbjct: 356 VSVGDTGIGVSLEQQSKLFKKFVQIDGSHSKAYGGTGLGLVISQKLVETMGGKVAFFS-M 414 Query: 640 NEGSRFKITIPCVFQD 655 EG +T + ++ Sbjct: 415 GEGLGSTVTFTVLLEE 430 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 124 bits (310), Expect = 1e-30 Identities = 83/267 (31%), Positives = 143/267 (53%), Gaps = 11/267 (4%) Query: 391 IADITEIKKAEEQLKLSNKILAKATQLKDEFLANMSHELRTPLNSILGMIETLQNQVYGP 450 + + E + + L + +I + K F+ANMSHELR+PLN+I+G + + P Sbjct: 338 LIEYNESLQKQVDLVRAKEIAESEAKAKSTFVANMSHELRSPLNAIIGFSQLMLRTKNLP 397 Query: 451 LNGKQVQSLEIVENSGRHXXXXXXXXXXXXKIEAGRMDLDLNPTSVSALVNHSLTFVQQF 510 + +Q ++ I++ SG + KIEAG+ L+ + + L++ + Sbjct: 398 M--EQYENAGIIQRSGEYLLNLINNILDFSKIEAGKTHLNRHNFDLYLLLDDLEDMLHLK 455 Query: 511 AIQKQINLSSEIIPNLPD-VLVDKRRLCQVLINLLNNAIKFTPEGGKVVV-------QAD 562 A + I L +LP V D+ +L Q+L+NLL+NAIKFT EG V+ Q + Sbjct: 456 AANEGIELIFIRDHDLPRYVYGDEIKLRQILLNLLSNAIKFTTEGEVVLTSNFRNAEQQE 515 Query: 563 LIKEQGKENSQSPPQLSFTVFDTGIGIEADRLNNIFEPFVQIDSALNRRYDGTGLGLSLV 622 +I + ++ L FT+ DTG GI L+++FE F Q +S N + +GTGLGL++ Sbjct: 516 VINPETSTEPKNKYWLDFTIKDTGKGISEVELSHLFEAFSQTESGRNAQ-EGTGLGLAIT 574 Query: 623 KKIVELHGGSVTVTSKLNEGSRFKITI 649 ++ ++L GG + V+S +++G+ F +I Sbjct: 575 RQFIKLMGGDINVSSVVDQGTTFSFSI 601 >SYNE-PCC-01-000985 sll1475 Length = 297 Score = 114 bits (286), Expect = 9e-28 Identities = 83/264 (31%), Positives = 140/264 (53%), Gaps = 27/264 (10%) Query: 393 DITEIKKAEEQLKLSNKILAKATQLKDEFLANMSHELRTPLNSILGMIETLQNQVYGPLN 452 D+TE ++ EE ++L+ + + ++LK F + SHE RTPL++ L + L+N L+ Sbjct: 45 DVTERRRTEE-VRLALEREKELSRLKTRFFSMASHEFRTPLSTALAAAQLLENSEVAWLD 103 Query: 453 -GKQVQSLEIVENSGRHXXXXXXXXXXXXKIEAGRMDLDLNPTSVSALVNHSLTFVQQFA 511 K+ ++L ++NS ++ + EAG+++ + N + L QQF Sbjct: 104 PDKRSRNLHRIQNSVKNMVQLLDDILIINRAEAGKLEFNPNWLDLKLLF-------QQFI 156 Query: 512 IQKQINLSSE----IIPNLPDV--LVDKRRLCQVLINLLNNAIKFTPEGGKVVVQADLIK 565 + Q+++S + I + D LVD+R + +L NLL+NAIK++P GG++ + L Sbjct: 157 EEIQLSVSDQYYFDFICSAQDTKALVDERLVRSILSNLLSNAIKYSPGGGQIKIALSLDS 216 Query: 566 EQGKENSQSPPQLSFTVFDTGIGIEADRLNNIFEPFVQIDSALNRRYDGTGLGLSLVKKI 625 E Q+ F V D GIGI + IFEPF + + R GTGLGL + KK Sbjct: 217 E----------QIIFEVTDQGIGISPEDQKQIFEPFHRGKNV--RNITGTGLGLMVAKKC 264 Query: 626 VELHGGSVTVTSKLNEGSRFKITI 649 V+LH GS+ + S +++G+ I + Sbjct: 265 VDLHSGSILLKSAVDQGTTVTICL 288 >SYNE-PCC-01-001517 slr0222 Length = 1178 Score = 107 bits (266), Expect = 2e-25 Identities = 95/349 (27%), Positives = 157/349 (44%), Gaps = 24/349 (6%) Query: 311 NLITWLGFEQPLEPADGDFFIHLGDRPMFWQAIE-----QSLED--PTMELSTELRLEAA 363 N W E G + + P+ WQ I ++LE P + T +E Sbjct: 827 NFSNWYYINPSFESLTGYTPDEMYEDPLLWQKIHREEYAENLEQARPNLGEWTIFSMEKK 886 Query: 364 NG-EIYHCLLRGQIHQEQGEAFVKIIGTIADITEIKKAEEQLKLSNKILAKATQLKDEFL 422 +G +I+ + + A V + G DIT+IK+AE + S + + K +F+ Sbjct: 887 DGTQIWAQTVEFLVDDLSDTARVVVFGQ--DITDIKRAEIETLRSLVKERELNEAKSQFV 944 Query: 423 ANMSHELRTPLNSILGMIETLQNQVYGPLNGKQVQSLEIVENSGRHXXXXXXXXXXXXKI 482 +SHE RTPL SI+G E L K+ Q + ++NS + + Sbjct: 945 DIVSHEFRTPLTSIIGFGELLSKYFDRLSTEKKQQYINNIQNSSQRLKQLIDDVLSISRY 1004 Query: 483 EAGRMDLDLNPTSVSALVNHSL-TFVQQFAIQKQINLSSEIIPNLPDVLVDKRRLCQVLI 541 +A +++++L ++ L N + F + L+ + P+ LVD R L +L Sbjct: 1005 DANKIEIELGNINLRNLANDLIENFSCGLGSEHNFELNYHLKPD-EHSLVDVRLLRHILE 1063 Query: 542 NLLNNAIKFTPEGGKVVVQADLIKEQGKENSQSPPQLSFTVFDTGIGIEADRLNNIFEPF 601 N+L+NAIK++ G + + D+ K++ L F V D GIGI +FE F Sbjct: 1064 NILSNAIKYSAPGSTITL--DISKDE--------EHLLFQVRDEGIGIPLQDQEKLFEAF 1113 Query: 602 VQIDSALNRRYDGTGLGLSLVKKIVELHGGSVTVTSKLNEGSRFKITIP 650 + + + GTGLGLS+VK+ VE GG++ V S +G+ I +P Sbjct: 1114 HRASNVGD--IPGTGLGLSIVKRYVEFQGGTIEVISMPGKGTTMVIKLP 1160 >SYNE-PCC-01-001690 slr0473 Length = 748 Score = 79.3 bits (194), Expect = 4e-17 Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 17/254 (6%) Query: 397 IKKAEEQLKLSNKILAKATQLKDEFLANMSHELRTPLNSILGMIETLQNQVYGPLNGKQV 456 +++AEE +L+ + LK +F SH+L+ PLN + ++ L+ + L+ Sbjct: 509 LRQAEELAQLARNLERSNADLK-KFAYIASHDLQEPLNQVSNYVQLLEMRYSEALDEDAK 567 Query: 457 QSLEIVENSGRHXXXXXXXXXXXXKIEAGRMDLDLNPTSVSALVNHSLTFVQQFAIQKQI 516 ++ K++ L T V +V+ +L ++Q + Sbjct: 568 DFIDFAVTGVSLMQTLIDDILTYAKVDTQYAQLTF--TDVQEVVDKALANLKQRIEESGA 625 Query: 517 NLSSEIIPNLPDVLVDKRRLCQVLINLLNNAIKFTPEGGKVVVQADLIKEQGKENSQSPP 576 + + ++P V+ D+ +L QV NL+ N IKF + ++ IK G + Sbjct: 626 EIE---VGSMPAVMADQIQLMQVFQNLIANGIKFAGD------KSPKIKIWGDRQEDA-- 674 Query: 577 QLSFTVFDTGIGIEADRLNNIFEPFVQIDSALNRRYDGTGLGLSLVKKIVELHGGSVTVT 636 F V D GIGI+ IF F ++ + Y GTG+GL++ KKI+E H G + + Sbjct: 675 -WVFAVQDNGIGIDPQFFERIFVIFQRLHT--RDEYKGTGMGLAICKKIIEGHQGQIWLE 731 Query: 637 SKLNEGSRFKITIP 650 S EGS F +IP Sbjct: 732 SNPGEGSTFYFSIP 745 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.318 0.136 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,158 Number of Sequences: 78 Number of extensions: 3061 Number of successful extensions: 74 Number of sequences better than 1.0e-05: 15 Number of HSP's better than 0.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 15 Number of HSP's gapped (non-prelim): 22 length of query: 806 length of database: 48,235 effective HSP length: 70 effective length of query: 736 effective length of database: 42,775 effective search space: 31482400 effective search space used: 31482400 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 96 (41.6 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-000414 sll0649 (245 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-000414 sll0649 466 e-134 SYNE-PCC-01-001437 slr0081 167 3e-44 SYNE-PCC-01-002033 slr0947 160 4e-42 SYNE-PCC-01-001461 slr0115 140 5e-36 SYNE-PCC-01-000242 sll0396 137 3e-35 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 124 4e-31 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 121 2e-30 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 116 6e-29 SYNE-PCC-01-002672 slr1837 115 1e-28 SYNE-PCC-01-000877 sll1330 109 1e-26 SYNE-PCC-01-000518 sll0789 107 4e-26 SYNE-PCC-01-002486 slr1584 106 8e-26 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 104 2e-25 SYNE-PCC-01-000523 sll0797 101 2e-24 SYNE-PCC-01-001306 sll1905 91 3e-21 SYNE-PCC-01-002086 slr1042 91 5e-21 SYNE-PCC-01-002731 slr1909 84 3e-19 SYNE-PCC-01-002489 slr1588 75 2e-16 SYNE-PCC-01-001133 sll1673 73 8e-16 SYNE-PCC-01-000800 sll1228 69 1e-14 SYNE-PCC-01-002635 slr1783 62 2e-12 SYNE-PCC-01-002788 slr1982 61 3e-12 SYNE-PCC-01-002618 slr1760 60 5e-12 SYNE-PCC-01-002221 slr1213 60 7e-12 SYNE-PCC-01-002617 slr1759 59 1e-11 SYNE-PCC-01-002873 slr2098 59 1e-11 SYNE-PCC-01-002879 slr2104 58 3e-11 SYNE-PCC-01-001132 sll1672 57 4e-11 SYNE-PCC-01-000608 sll0921 52 1e-09 SYNE-PCC-01-001160 sll1708 52 2e-09 SYNE-PCC-01-001575 slr0312 47 8e-08 HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator pr... 47 8e-08 SYNE-PCC-01-001075 sll1592 44 6e-07 SYNE-PCC-01-002778 slr1969 40 7e-06 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 466 bits (1198), Expect = e-134 Identities = 230/245 (93%), Positives = 230/245 (93%) Query: 1 MWGNRTEFIAMPNILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIV 60 MWGNRTEFIAMPNILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIV Sbjct: 1 MWGNRTEFIAMPNILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIV 60 Query: 61 LDLMLPKLDGLEVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRE 120 LDLMLPKLDGLEVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRE Sbjct: 61 LDLMLPKLDGLEVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRE 120 Query: 121 XXXXXXXXXXXXXXXGQPVGQIYRTNHFQVDLDQHQASRYQGDRQEELELTGLEFNLLAT 180 GQPVGQIYRTNHFQVDLDQHQASRYQGDRQEELELTGLEFNLLAT Sbjct: 121 LVARVRALLRRQLRQGQPVGQIYRTNHFQVDLDQHQASRYQGDRQEELELTGLEFNLLAT 180 Query: 181 FMSYPGRVWNRTQLIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGYK 240 FMSYPGRVWNRTQLIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGYK Sbjct: 181 FMSYPGRVWNRTQLIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGYK 240 Query: 241 FEDPD 245 FEDPD Sbjct: 241 FEDPD 245 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 167 bits (423), Expect = 3e-44 Identities = 94/235 (40%), Positives = 132/235 (56%), Gaps = 13/235 (5%) Query: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQE-------QVPDLIVLDLMLP 66 IL+VED+ I + I +L+ E + +DG L + QE DLI+LD+MLP Sbjct: 33 ILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIMLP 92 Query: 67 KLDGLEVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPREXXXXXX 126 +++GL+VC +R G + IL+++AKG E++++ GL GADDY+ KPFS +E Sbjct: 93 QVNGLDVCRSLRF--GGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARCR 150 Query: 127 XXXXXXXXXGQPVGQIYRTNHFQVDLDQHQASRYQGDRQEELELTGLEFNLLATFMSYPG 186 G + + DL + R EE+ L EF LL FMSYP Sbjct: 151 AMIRRQGLAGNNIAPFRKFR----DLVLYPQECRVLMRGEEVSLAPKEFRLLELFMSYPR 206 Query: 187 RVWNRTQLIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGYKF 241 RVW+R QLIE +WG DF GD + VD HIR LR+K+E DP+ P ++ TV G GY+F Sbjct: 207 RVWSREQLIEHIWGIDFMGDSKTVDVHIRWLREKLEQDPSQPEYLVTVRGFGYRF 261 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 160 bits (405), Expect = 4e-42 Identities = 90/232 (38%), Positives = 133/232 (57%), Gaps = 12/232 (5%) Query: 16 IVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLEVCT 75 +V+D+ I +++ L + + DGE + F E PDL+VLD+M+PKLDG VC Sbjct: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 Query: 76 RIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPREXXXXXXXXXXXXXXX 135 +R++ D I+MLTA G+ DRI GL GADDY+VKPFSP+E Sbjct: 61 ELRKE---SDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKN 117 Query: 136 GQ---PVGQIYRTNHFQVDLDQHQASRYQGDRQEELELTGLEFNLLATFMSYPGRVWNRT 192 G P + + ++D ++ Q Y+GD E + LTG+EF+LL +S G ++R+ Sbjct: 118 GMPGIPSSGVLQIATIRIDTNKRQV--YKGD--ERIRLTGMEFSLLELLVSRSGEPFSRS 173 Query: 193 QLIEKLWG--NDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGYKFE 242 ++++++WG + D RVVD HI RLR K+E DP+NP I T G GY F+ Sbjct: 174 EILQEVWGYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGYLFQ 225 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 140 bits (352), Expect = 5e-36 Identities = 84/234 (35%), Positives = 121/234 (51%), Gaps = 6/234 (2%) Query: 11 MPNILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDG 70 MP ILI++DD I+ L+ LE + DG G + + PDLI+LDLMLPK+DG Sbjct: 1 MPRILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDG 60 Query: 71 LEVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPREXXXXXXXXXX 130 VC R+R+ + D +LMLTA G+ D+I G +GADDYL KPF E Sbjct: 61 FTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLR 120 Query: 131 XXXXXGQPV--GQIYRTNHFQVDLDQHQASRYQGDRQEELELTGLEFNLLATFMSYPGRV 188 Q +I + ++ +A + + ++LT LEF LL + G+ Sbjct: 121 RTDRIPQAAKHSEILNQGPLTLVPERFEAIWF----GKSIKLTHLEFELLHCLLQRHGQT 176 Query: 189 WNRTQLIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGYKFE 242 + + ++ ++WG + D + HIR LR K+EP+P P FIKTV G GY E Sbjct: 177 VSPSDILREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTVYGAGYCLE 230 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 137 bits (346), Expect = 3e-35 Identities = 83/232 (35%), Positives = 132/232 (56%), Gaps = 14/232 (6%) Query: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLEV 73 +L+VE+++++A+ + L+ E + V DG G QE PDLI+++ LP + GLE+ Sbjct: 5 VLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLEL 64 Query: 74 CTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPREXXXXXXXXXXXXX 133 C R+R+ GS+ P I+++TAK + +R++GL GADDY+VKPF+ E Sbjct: 65 CRRLREM-GSRIP-IILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRRTH 122 Query: 134 XXGQPVGQIYRTNHFQVDLDQHQASR--YQGDRQEELELTGLEFNLLATFMSYPGRVWNR 191 V Q DL ++++R +GDR ++LT EF LL +S+ +V R Sbjct: 123 TTSDEVLQF-------ADLRFNRSTREIQRGDRL--IDLTAKEFELLDYLLSHARQVLTR 173 Query: 192 TQLIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGYKFED 243 Q++E++WG DF GD +++ +IR LR K+E P I+TV G+GY D Sbjct: 174 EQILERVWGYDFMGDSNIIEVYIRYLRLKLEA-AGEPRLIQTVRGVGYVLRD 224 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 124 bits (310), Expect = 4e-31 Identities = 81/228 (35%), Positives = 124/228 (54%), Gaps = 9/228 (3%) Query: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLEV 73 ILIVED+ I ++I L ++ + I +D +T + +E P LI+LD MLP G++ Sbjct: 5 ILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKEN-PKLILLDWMLPGRSGIQF 63 Query: 74 CTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPREXXXXXXXXXXXXX 133 I++Q I+MLTAK E D I L+ GADDY+ KPFSP+ Sbjct: 64 IQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWRRIY 123 Query: 134 XXGQPVGQIYRTNHFQVDLDQHQASRYQGDRQEELELTGLEFNLLATFMSYPGRVWNRTQ 193 + Q + + +D + Q +Q Q+E+ L+ EF LL FM +P +V++R Q Sbjct: 124 ---EQQSQFIQIDELSID-ENAQRVFFQ---QQEINLSSTEFKLLHFFMRHPEKVYSREQ 176 Query: 194 LIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGYKF 241 L+ ++W ND + R VD++IRRLR+ + P +I+TV G GY+F Sbjct: 177 LLNRIWHNDLEVEYRTVDSYIRRLRRNLAPFQCE-HYIQTVRGSGYRF 223 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 121 bits (304), Expect = 2e-30 Identities = 72/234 (30%), Positives = 115/234 (49%), Gaps = 10/234 (4%) Query: 12 PNILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGL 71 P IL+VED+ ++ E E + +G I +L+V+D+ LP +GL Sbjct: 4 PKILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGL 63 Query: 72 EVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPREXXXXXXXXXXX 131 + +R++ ++ LT + E+D+I+GL GADDYL KPF+PRE Sbjct: 64 LLARELREELSLP---LIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHR 120 Query: 132 XXXXGQPVG----QIYRTNHFQVDLDQHQASRYQGDRQEELELTGLEFNLLATFMSYPGR 187 + + YR N +++DL+ H +G +E +L EF + F PG+ Sbjct: 121 AMPHQEKENTFGREFYRFNGWKLDLNSHSLITPEG---QEFKLPRSEFRAMLHFCENPGK 177 Query: 188 VWNRTQLIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGYKF 241 + R +L++K+ G + +R VD IRR+RK E P P I T+ G GY+F Sbjct: 178 LQTREELLKKMTGRELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGYRF 231 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 116 bits (291), Expect = 6e-29 Identities = 76/230 (33%), Positives = 117/230 (50%), Gaps = 8/230 (3%) Query: 11 MPNILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDG 70 M +L+V+DD E+ +L+ LE E F N+G L+ E L++LD+M+PKL+G Sbjct: 1 MSKLLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKLNESYK-LVLLDVMMPKLNG 59 Query: 71 LEVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPREXXXXXXXXXX 130 +E IR+ S P ++MLTA+GE+IDR++GL GADD L KPF+ RE Sbjct: 60 IETLKEIRKV--SNVP-VMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILR 116 Query: 131 XXXXXGQPVGQIYRTNHFQVDLD-QHQASRYQGDRQEELELTGLEFNLLATFMSYPGRVW 189 + + + + L H + Y +E L LT EF +L + G V Sbjct: 117 RSASPSNNISNVEILSFDGITLHFSHGIATY---NEENLNLTDYEFKILCLLLKSKGNVV 173 Query: 190 NRTQLIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGY 239 +R +L ++ +R +D HI LR+K+ P++ KT+ G GY Sbjct: 174 SREELSLEVMEKPLTPFDRSLDMHISNLRRKLPKRKNKPSWFKTLRGKGY 223 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 115 bits (289), Expect = 1e-28 Identities = 79/239 (33%), Positives = 118/239 (49%), Gaps = 14/239 (5%) Query: 11 MPNILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDG 70 M NIL+V+D+ + + + + L + T V + G+TGL + DL++LD MLP++ G Sbjct: 1 MANILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSG 60 Query: 71 LEVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPREXXX------- 123 LE+C +IR G P +L LTAK DR+ GL G DDYL+KPF RE Sbjct: 61 LEICRQIRIL-GHSTP-VLFLTAKDTLDDRVAGLDAGGDDYLIKPFELRELLARVRALLR 118 Query: 124 XXXXXXXXXXXXGQPVGQIYRTNHFQVDLDQHQASRYQGDRQEELELTGLEFNLLATFMS 183 G + N+ +D+ +Q + QG R + L+ E LL F+ Sbjct: 119 RQSHGETITETLGAVKNNLLSVNNVSLDV-ANQVAYCQGQR---IALSEKEVALLTLFLQ 174 Query: 184 YPGRVWNRTQLIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGYKFE 242 PG++ + ++ LW + V+ +R LR+KIE P P I +V G GY FE Sbjct: 175 APGQILSHEEIYSHLWPGESPPSSNVLAALVRLLRRKIE-QPNAPRLINSVYGKGYCFE 232 >SYNE-PCC-01-000877 sll1330 Length = 250 Score = 109 bits (272), Expect = 1e-26 Identities = 75/228 (32%), Positives = 113/228 (49%), Gaps = 10/228 (4%) Query: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLEV 73 I +VE + + L+ L++ + + + F Q+P L V+D L DG+E+ Sbjct: 6 ISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGDGIEL 65 Query: 74 CTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPREXXXXXXXXXXXXX 133 C + QQ S I +L+AK E D + GL GADDYL KPF +E Sbjct: 66 CRWLYQQHQSM---IFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRRVR 122 Query: 134 XXGQPVGQIYRTNHFQVDLDQHQASRYQGDRQEELELTGLEFNLLATFMSYPGRVWNRTQ 193 P+ Y ++DL Q + YQG+ ++LT EF+LL G +RT+ Sbjct: 123 TVAAPLLLDYGV--LKIDLVQRRVE-YQGNF---VDLTPQEFSLLYVLTQAEGSALSRTE 176 Query: 194 LIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGYKF 241 L+ + W + + R +DTH+ LRKKIE DP P+ I+TV +GY+F Sbjct: 177 LLRRAWP-EAIDNPRTIDTHVLSLRKKIETDPRQPSLIQTVRNVGYRF 223 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 107 bits (267), Expect = 4e-26 Identities = 74/231 (32%), Positives = 112/231 (48%), Gaps = 11/231 (4%) Query: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPD--LIVLDLMLPKLDGL 71 +L+VED+ ++ + + L RE + DG + + L + D M+P L GL Sbjct: 3 LLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSGL 62 Query: 72 EVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPREXXXXXXXXXXX 131 E+C ++R Q S ILMLTAK + DR+ GL GADDYL+KPF E Sbjct: 63 ELCQKLRGQRSSLP--ILMLTAKDQIADRVEGLDAGADDYLIKPFGMAELLARLRSLQRR 120 Query: 132 XXXXGQPVGQIYRTNHFQVDLDQHQASRYQGDRQEELELTGLEFNLLATFMSYPGRVWNR 191 QP Q + + +D + Q + LT EF LL FM +P ++ + Sbjct: 121 SPEL-QP--QQLQVGQWWLD---YGTFAVVTPEQARITLTAKEFQLLEYFMKHPQQILSS 174 Query: 192 TQLIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGYKFE 242 Q+ +LW VV +R LR+K+E + ++ I+TV GLGY+F+ Sbjct: 175 EQIKNQLWALSAESTSNVVAAQVRLLRRKLE-EYSHGNLIETVYGLGYRFQ 224 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 106 bits (264), Expect = 8e-26 Identities = 71/227 (31%), Positives = 112/227 (49%), Gaps = 9/227 (3%) Query: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLEV 73 IL+VEDD +A+ + E L + +T + D DL++LD+MLP+LDG+ + Sbjct: 3 ILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGITL 62 Query: 74 CTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPREXXXXXXXXXXXXX 133 C + R S ILM+TA+ D+I GL GADDY+VKP E Sbjct: 63 CQKWRSH--SYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRRGC 120 Query: 134 XXGQPVGQIYRTNHFQVDLDQHQASRYQGDRQEELELTGLEFNLLATFMSYPGRVWNRTQ 193 QPV ++D ++ S E L LT E+++L + RV +R+ Sbjct: 121 ATCQPV---LEWGPIRLDPSTYEVSY----DNEVLSLTRKEYSILELLLRNGRRVLSRSM 173 Query: 194 LIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGYK 240 +I+ +W + +E V H+R LR+K++ + I+TV G+GY+ Sbjct: 174 IIDSIWKLESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGYR 220 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 104 bits (260), Expect = 2e-25 Identities = 79/226 (34%), Positives = 110/226 (48%), Gaps = 14/226 (6%) Query: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLEV 73 IL++EDD I ++ L + F DG+TG+ D +VLDL LPKLDGLEV Sbjct: 3 ILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLEV 62 Query: 74 CTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPREXXXXXXXXXXXXX 133 + R +D +L+LTA+ +R+ GL +GADDYL KPF+ E Sbjct: 63 LQQWRS--NHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRRY 120 Query: 134 XXGQPVGQIYRTNHFQVDLDQHQASRYQGDRQEELELTGLEFNLLATFMSYPGRVWNRTQ 193 V V LDQ+Q S + + + + LT E+ LL FM RV +R+ Sbjct: 121 GYHHSV-----IEQAGVKLDQNQRSVWLNN--QPISLTSREYKLLELFMLNKDRVLSRSS 173 Query: 194 LIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGY 239 + EKL D +D HI LR+K+ FI+TV G+GY Sbjct: 174 IEEKLSSWDEEISSGALDVHIYNLRQKL-----GKQFIRTVHGVGY 214 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 101 bits (252), Expect = 2e-24 Identities = 75/234 (32%), Positives = 114/234 (48%), Gaps = 12/234 (5%) Query: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPD--LIVLDLMLPKLDGL 71 IL+VED+ ++ I++ L E++ DG + Q + L ++D +LP L GL Sbjct: 3 ILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSGL 62 Query: 72 EVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPREXXXXXXXXXXX 131 E+C ++R Q S +LMLTA GE +R+ GL GADDYL KPF E Sbjct: 63 ELCQKLRTQGNSLP--VLMLTALGEPENRVEGLDAGADDYLTKPFVMAELLARLRALQRR 120 Query: 132 XXXXGQPVGQIYRTNHFQVDLDQHQASRYQGD----RQEELELTGLEFNLLATFMSYPGR 187 QP QI +F +D + S + ++E+ LT EF + M P R Sbjct: 121 SPQF-QP--QILTLGNFSLDPSNNLLSVTISEPLNLERQEIALTVREFQIFQYLMQNPER 177 Query: 188 VWNRTQLIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGYKF 241 + + +++ ++LW D VV +R +R+K+ P IKTV G GY+F Sbjct: 178 IISGSKIRQQLWDLDEEPMSNVVAAQMRLIRRKLAQQNC-PCPIKTVPGQGYRF 230 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 91.3 bits (225), Expect = 3e-21 Identities = 46/107 (42%), Positives = 67/107 (62%) Query: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLEV 73 IL+V+D +E +I E LE E ++ G L+ + PDLI+LDLM+P +DGLEV Sbjct: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQPDLILLDLMMPGMDGLEV 79 Query: 74 CTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRE 120 C R++Q P ++D ++ LTA E+ D + + GA DY+ KPFSP E Sbjct: 80 CDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPE 126 Score = 57.0 bits (136), Expect = 6e-11 Identities = 33/103 (32%), Positives = 60/103 (58%), Gaps = 1/103 (0%) Query: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLEV 73 IL+ ED+ Q+ + L++ + V N+G+ L + D++++D+ +P++DGL Sbjct: 742 ILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTA 801 Query: 74 CTRIRQQPG-SKDPYILMLTAKGEEIDRIIGLSTGADDYLVKP 115 IR+ G S+ P+I+ +TA E DR L++G +DY+ KP Sbjct: 802 TEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKP 844 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 90.5 bits (223), Expect = 5e-21 Identities = 43/110 (39%), Positives = 66/110 (60%) Query: 11 MPNILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDG 70 M +L+VED ++I L+ + + DG L Q PDL+VLD+++P+++G Sbjct: 27 MNAVLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNG 86 Query: 71 LEVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRE 120 EVC RI+ P +K+ ++M ++KGEE DR G+ GAD Y+ KPF P E Sbjct: 87 YEVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPME 136 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 84.3 bits (207), Expect = 3e-19 Identities = 38/108 (35%), Positives = 65/108 (60%) Query: 13 NILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLE 72 ++L+V+DD + L+++ LE + + +G L + VPD+IV D+M+P++DG Sbjct: 9 HLLLVDDDPNLLLLVKDYLEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYA 68 Query: 73 VCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRE 120 ++RQ P ++ L+AKG+ +R+ GL+ GAD Y+ KPF P E Sbjct: 69 FIEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEE 116 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 75.5 bits (184), Expect = 2e-16 Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 2/112 (1%) Query: 11 MPNILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQ--EQVPDLIVLDLMLPKL 68 M IL+VED+ I +LI ETL E + + +G L + E +PDLI+ D+M+P++ Sbjct: 1 MSTILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEM 60 Query: 69 DGLEVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRE 120 DG + T +++ + + LTA G D G+++GADDYL+KPF + Sbjct: 61 DGHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQED 112 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 73.2 bits (178), Expect = 8e-16 Identities = 37/108 (34%), Positives = 60/108 (55%) Query: 13 NILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLE 72 NIL+V+D QL+ + L +T G+ LR Q + PDLI+LD+ +P +DG + Sbjct: 10 NILLVDDLPNNLQLLSDLLINLGYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQ 69 Query: 73 VCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRE 120 VC I+++ +D I+ ++A G+ D++ G DY+ KPF E Sbjct: 70 VCEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQIEE 117 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 68.9 bits (167), Expect = 1e-14 Identities = 36/107 (33%), Positives = 57/107 (53%) Query: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLEV 73 +L+V+D E L+R+ L F +GE + +++ P +I++D+ +P LDG Sbjct: 420 VLVVDDRPESRLLLRQLLTSLGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRST 479 Query: 74 CTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRE 120 +I+ P + I+ LTA E +R LS G DD+L KPF P E Sbjct: 480 TQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEE 526 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 62.0 bits (149), Expect = 2e-12 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 1/109 (0%) Query: 13 NILIVEDDQEIAQLIRETLERE-QFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGL 71 ++L+V+D+ + + ++ LE F + + Q +P L++ D+M+P++DG Sbjct: 57 SLLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGY 116 Query: 72 EVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRE 120 + ++R+ + ++ LTA+G DRI G TG D +L KPF P E Sbjct: 117 QFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDE 165 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 61.2 bits (147), Expect = 3e-12 Identities = 32/106 (30%), Positives = 55/106 (51%) Query: 10 AMPNILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLD 69 +M +L+VED++ ++ L R+ + ++ DGE + + + P LI++D+ LP +D Sbjct: 3 SMAKVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIID 62 Query: 70 GLEVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKP 115 G +I+ P I+ LTA DR ++ G DDY KP Sbjct: 63 GWTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKP 108 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 60.5 bits (145), Expect = 5e-12 Identities = 32/106 (30%), Positives = 54/106 (50%) Query: 10 AMPNILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLD 69 A IL+V+DD + +R L++E + +GE L F E P++++LD ++P +D Sbjct: 10 AAAKILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMD 69 Query: 70 GLEVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKP 115 G C + + + P +LM+T +E GA DY+ KP Sbjct: 70 GFACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKP 115 >SYNE-PCC-01-002221 slr1213 Length = 241 Score = 60.1 bits (144), Expect = 7e-12 Identities = 37/105 (35%), Positives = 61/105 (58%), Gaps = 5/105 (4%) Query: 14 ILIVEDDQEIAQLIRETLEREQFT-CIVTNDGETGLRIFQEQVPDLIVLDLMLP-KLDGL 71 ILIVED++ +AQ I + L+ + + C++ +DG T L+ E PDL++LD+ + ++DG+ Sbjct: 5 ILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEIDGI 64 Query: 72 EVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPF 116 EV RI+ Y L + GE ++R T Y++KPF Sbjct: 65 EVAERIKSLYSIPIVY-LTAFSDGETLER--AQKTNPQGYVIKPF 106 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 59.3 bits (142), Expect = 1e-11 Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 1/115 (0%) Query: 4 NRTEFIAMPNILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDL 63 N T IL+ ED+ ++ + L + + N+G+ + +++ DL+++D+ Sbjct: 1182 NATSLQPALQILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDM 1241 Query: 64 MLPKLDGLEVCTRIRQQ-PGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFS 117 +P +DG+ C IRQ P + P I+ +TA DR L G D Y+ KP S Sbjct: 1242 QMPVMDGITACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPIS 1296 Score = 45.1 bits (105), Expect = 2e-07 Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 12/102 (11%) Query: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDL--IVLDLMLPKLDGL 71 +LIV+D++ +++++ + C GE+ L F + PDL +LDL +P +DG+ Sbjct: 1036 VLIVDDNETNRRILQDQCQAWGLVCHCFTSGESALDWFA-RCPDLDAAILDLQMPNMDGI 1094 Query: 72 EVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLV 113 + +RQ KD I++L++ GL GAD+ V Sbjct: 1095 TLAHHLRQFAQGKDLPIILLSS---------GLVAGADELSV 1127 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 58.9 bits (141), Expect = 1e-11 Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 5/110 (4%) Query: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPD-----LIVLDLMLPKL 68 +L+V+D+ ++++ LE+ +F G L E + ++ +D +P + Sbjct: 773 VLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPNM 832 Query: 69 DGLEVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSP 118 DGLEV R++ + P I ++TA G E + S G DD LVKP SP Sbjct: 833 DGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISP 882 Score = 57.0 bits (136), Expect = 6e-11 Identities = 34/107 (31%), Positives = 53/107 (49%) Query: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLEV 73 IL+VED++ ++ E L F V +G L L+++D+ +P++DG+E Sbjct: 927 ILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIEA 986 Query: 74 CTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRE 120 IRQ P I+ +TA + DR L G +D+L KP P E Sbjct: 987 TIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEE 1033 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 57.8 bits (138), Expect = 3e-11 Identities = 31/106 (29%), Positives = 54/106 (50%) Query: 13 NILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLE 72 +IL+VED++ + + L + V N+G+ L + D I++D+ +P L+G + Sbjct: 719 SILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYD 778 Query: 73 VCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSP 118 IRQQ ++ I+ +TA D+ L G +D+L KP P Sbjct: 779 ATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKP 824 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 57.4 bits (137), Expect = 4e-11 Identities = 33/103 (32%), Positives = 54/103 (52%) Query: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLEV 73 IL+V+D QL+ + L F ++G+ + +++ P LI +D+ +P +DG E Sbjct: 632 ILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYEA 691 Query: 74 CTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPF 116 I+ Q ++ LTA E ++ I LS G DD+L KPF Sbjct: 692 TKYIKGQVKGNATAVVALTASVLEEEKAIVLSAGCDDFLRKPF 734 >SYNE-PCC-01-000608 sll0921 Length = 222 Score = 52.4 bits (124), Expect = 1e-09 Identities = 29/103 (28%), Positives = 59/103 (57%), Gaps = 2/103 (1%) Query: 14 ILIVEDDQEIAQLIRETLERE-QFTCI-VTNDGETGLRIFQEQVPDLIVLDLMLPKLDGL 71 I ++ED+ I Q +++ L E F + +G GL + Q+ PD++++D+ LP ++G+ Sbjct: 6 IALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNGI 65 Query: 72 EVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVK 114 +V ++++ P + +++LT +E + S GAD Y +K Sbjct: 66 DVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMK 108 >SYNE-PCC-01-001160 sll1708 Length = 226 Score = 51.6 bits (122), Expect = 2e-09 Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 6/104 (5%) Query: 14 ILIVEDDQEIAQLIRETL-EREQFTCIVTNDGETGLRIFQEQV--PDLIVLDLMLPKLDG 70 ILIVEDD + + + L E+F I D G + Q V PDLIV+D+ LP LDG Sbjct: 19 ILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGA-VQQAAVLNPDLIVMDIGLPGLDG 77 Query: 71 LEVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVK 114 +E +I+Q S +I++LT+ + I LS+GAD Y VK Sbjct: 78 IEATKQIKQT--SPQIHIVVLTSHTLPNEIIAALSSGADAYCVK 119 >SYNE-PCC-01-001575 slr0312 Length = 209 Score = 46.6 bits (109), Expect = 8e-08 Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 4/109 (3%) Query: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTN--DGETGLRIFQEQVPDLIVLDLMLPKLDGL 71 +LI +D Q + + R+ ++ +GE + +F+E PD+ ++DL +P+++G+ Sbjct: 9 VLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPEVEGV 68 Query: 72 EVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRE 120 + I K I++LT + D GL GA YL+K P E Sbjct: 69 AAISAICAI--VKFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDE 115 >HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator protein (narP) Length = 208 Score = 46.6 bits (109), Expect = 8e-08 Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 4/107 (3%) Query: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTN--DGETGLRIFQEQVPDLIVLDLMLPKLDGL 71 +L+++D + + I++ +E + +V + G G+ + + PD+I+LDL + L GL Sbjct: 7 VLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLSGL 66 Query: 72 EVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSP 118 + +R + D IL+LT + D + GAD YL+K P Sbjct: 67 DTLKGLRAE--GVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEP 111 >SYNE-PCC-01-001075 sll1592 Length = 226 Score = 43.5 bits (101), Expect = 6e-07 Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 4/103 (3%) Query: 14 ILIVEDDQEIAQLIRETLEREQFTCIV--TNDGETGLRIFQEQVPDLIVLDLMLPKLDGL 71 IL+VEDD+ + L +E + DGET + +Q+ D+++LD+ LP + G+ Sbjct: 10 ILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPGIGGI 69 Query: 72 EVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVK 114 E C +I++ IL ++ I+R+I A Y VK Sbjct: 70 EACHQIKKIHPQLPVLILTSHSQPALINRLI--EAQAQGYCVK 110 >SYNE-PCC-01-002778 slr1969 Length = 750 Score = 40.0 bits (92), Expect = 7e-06 Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 5/112 (4%) Query: 10 AMP---NILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLP 66 AMP +++++E D+EIA LI E L + I D L+ + P LI++D Sbjct: 625 AMPFNSSVIVIEQDEEIATLICELLTVANYQVIWLIDTTNALQQVELLQPGLIIVDGDF- 683 Query: 67 KLDGLEVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSP 118 +D EV I++ + +L+ + G DDYL+KP P Sbjct: 684 -VDVTEVTRGIKKSRRISKVTVFLLSESLSSAEWQALSQKGIDDYLLKPLQP 734 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.321 0.142 0.424 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,988 Number of Sequences: 78 Number of extensions: 1027 Number of successful extensions: 81 Number of sequences better than 1.0e-05: 34 Number of HSP's better than 0.0 without gapping: 28 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 8 Number of HSP's gapped (non-prelim): 38 length of query: 245 length of database: 48,235 effective HSP length: 60 effective length of query: 185 effective length of database: 43,555 effective search space: 8057675 effective search space used: 8057675 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 91 (39.7 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-000511 sll0782 (369 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-000511 sll0782 724 0.0 SYNE-PCC-01-001575 slr0312 58 4e-11 SYNE-PCC-01-000608 sll0921 53 2e-09 SYNE-PCC-01-001160 sll1708 51 7e-09 SYNE-PCC-01-001075 sll1592 51 7e-09 SYNE-PCC-01-001039 sll1544 49 2e-08 SYNE-PCC-01-002951 ssl0564 48 4e-08 HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator pr... 45 3e-07 SYNE-PCC-01-002731 slr1909 45 5e-07 >SYNE-PCC-01-000511 sll0782 Length = 369 Score = 724 bits (1868), Expect = 0.0 Identities = 369/369 (100%), Positives = 369/369 (100%) Query: 1 MLDSAQLIFDLQKVNTTSKRISGCLDTTAITKEITEALIHDFHCVFARIWLTEPDGASLK 60 MLDSAQLIFDLQKVNTTSKRISGCLDTTAITKEITEALIHDFHCVFARIWLTEPDGASLK Sbjct: 1 MLDSAQLIFDLQKVNTTSKRISGCLDTTAITKEITEALIHDFHCVFARIWLTEPDGASLK 60 Query: 61 LVASSGLHTSTNGSFARVPMGAYKVGKIAQSCIPFLSNHLANETWVKDRDWAIANNIRGF 120 LVASSGLHTSTNGSFARVPMGAYKVGKIAQSCIPFLSNHLANETWVKDRDWAIANNIRGF Sbjct: 61 LVASSGLHTSTNGSFARVPMGAYKVGKIAQSCIPFLSNHLANETWVKDRDWAIANNIRGF 120 Query: 121 AGYPLVGHDRVIGVLAVFSEAPFVAEFLEVLQVLCMAVAIAIDAVRQLQSETNTINTTQF 180 AGYPLVGHDRVIGVLAVFSEAPFVAEFLEVLQVLCMAVAIAIDAVRQLQSETNTINTTQF Sbjct: 121 AGYPLVGHDRVIGVLAVFSEAPFVAEFLEVLQVLCMAVAIAIDAVRQLQSETNTINTTQF 180 Query: 181 LDDQIPLPDVLARLLSQTKLTLIGTEKKLSPTLAYLLIRTTEIFNRLSCNYCRLIYGEIS 240 LDDQIPLPDVLARLLSQTKLTLIGTEKKLSPTLAYLLIRTTEIFNRLSCNYCRLIYGEIS Sbjct: 181 LDDQIPLPDVLARLLSQTKLTLIGTEKKLSPTLAYLLIRTTEIFNRLSCNYCRLIYGEIS 240 Query: 241 VTIEAIVEASVSEAFNTDGRSPFKEIEFLAHHVGGEFRSQSSVNQSILQISLQLPYDGFQ 300 VTIEAIVEASVSEAFNTDGRSPFKEIEFLAHHVGGEFRSQSSVNQSILQISLQLPYDGFQ Sbjct: 241 VTIEAIVEASVSEAFNTDGRSPFKEIEFLAHHVGGEFRSQSSVNQSILQISLQLPYDGFQ 300 Query: 301 NIKLNKHLLSEREKEIVSLLAQGLRDRDIAEELHISESTVKFHVNGTLHKLNAKNRYQAI 360 NIKLNKHLLSEREKEIVSLLAQGLRDRDIAEELHISESTVKFHVNGTLHKLNAKNRYQAI Sbjct: 301 NIKLNKHLLSEREKEIVSLLAQGLRDRDIAEELHISESTVKFHVNGTLHKLNAKNRYQAI 360 Query: 361 YQATVQGFI 369 YQATVQGFI Sbjct: 361 YQATVQGFI 369 >SYNE-PCC-01-001575 slr0312 Length = 209 Score = 58.2 bits (139), Expect = 4e-11 Identities = 31/67 (46%), Positives = 43/67 (64%) Query: 303 KLNKHLLSEREKEIVSLLAQGLRDRDIAEELHISESTVKFHVNGTLHKLNAKNRYQAIYQ 362 +L+ LSERE E++ LAQG+ + DIA L I E TVK HVN L+KL+ +R QA+ Sbjct: 141 RLSNPELSERELEVLGSLAQGMSNADIATALSIGEGTVKSHVNRILNKLDVGDRTQAVIV 200 Query: 363 ATVQGFI 369 A +G + Sbjct: 201 AVKRGIV 207 >SYNE-PCC-01-000608 sll0921 Length = 222 Score = 52.8 bits (125), Expect = 2e-09 Identities = 27/61 (44%), Positives = 39/61 (63%) Query: 309 LSEREKEIVSLLAQGLRDRDIAEELHISESTVKFHVNGTLHKLNAKNRYQAIYQATVQGF 368 L+ERE E++ L+ G + DIAE+L+I+ TVK HV L+KL A +R QA +A G Sbjct: 161 LTERELEVLQLIVDGCSNADIAEKLYITVGTVKTHVRNILNKLCANDRTQAAVRAIRSGL 220 Query: 369 I 369 + Sbjct: 221 V 221 >SYNE-PCC-01-001160 sll1708 Length = 226 Score = 50.8 bits (120), Expect = 7e-09 Identities = 23/61 (37%), Positives = 41/61 (67%) Query: 309 LSEREKEIVSLLAQGLRDRDIAEELHISESTVKFHVNGTLHKLNAKNRYQAIYQATVQGF 368 LSERE +++ L+ +G +++IA+ L++S +T+K HV G ++KL+ +R QA A G Sbjct: 166 LSEREIDVLKLIVEGKSNQEIAQTLYLSTNTIKTHVRGIMNKLSVDDRVQAAVIALRSGL 225 Query: 369 I 369 + Sbjct: 226 V 226 >SYNE-PCC-01-001075 sll1592 Length = 226 Score = 50.8 bits (120), Expect = 7e-09 Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 28/160 (17%) Query: 207 KKLSPTLAYLLIRTTE---IFNRL----SCNYCRLIYGEISVTIEAIVEASVSEAFNTDG 259 KK+ P L L++ + + NRL + YC + G + T+ + + + AF D Sbjct: 76 KKIHPQLPVLILTSHSQPALINRLIEAQAQGYC--VKGVAAETLVLAIRSVAAGAFWWDA 133 Query: 260 RSPFKEIEFLAHHVGGEFRSQSSVNQSILQISLQLPYDGFQNIKLNKHLLSEREKEIVSL 319 + +EI+ H SS ++L ++ DG ++ L++RE EI+SL Sbjct: 134 IAS-QEIQTAFQH--------SSSTGAVLPLA---DADG-------ENPLTKRELEILSL 174 Query: 320 LAQGLRDRDIAEELHISESTVKFHVNGTLHKLNAKNRYQA 359 +A+G +++IA+EL+I+ TV+ HV+ L KL ++R QA Sbjct: 175 VAKGKSNQEIADELYIAPGTVRVHVHTILRKLEVRDRTQA 214 >SYNE-PCC-01-001039 sll1544 Length = 228 Score = 49.3 bits (116), Expect = 2e-08 Identities = 24/67 (35%), Positives = 42/67 (62%) Query: 303 KLNKHLLSEREKEIVSLLAQGLRDRDIAEELHISESTVKFHVNGTLHKLNAKNRYQAIYQ 362 K K L++RE I+ L+A+G + +I +ELH++ STV+ +V + KLNA++R A Sbjct: 161 KSQKDELTQREVAILRLVAEGKTNSEIGQELHLASSTVREYVQTIMRKLNARDRTSAAIA 220 Query: 363 ATVQGFI 369 +G++ Sbjct: 221 GLREGYL 227 >SYNE-PCC-01-002951 ssl0564 Length = 89 Score = 48.1 bits (113), Expect = 4e-08 Identities = 25/59 (42%), Positives = 38/59 (64%) Query: 309 LSEREKEIVSLLAQGLRDRDIAEELHISESTVKFHVNGTLHKLNAKNRYQAIYQATVQG 367 LS+RE EI+ L+A GL +++++E L IS+ TV HV+ L K N +NR + + A G Sbjct: 12 LSDRELEILDLVAIGLTNQEVSERLEISKRTVDNHVSNILTKTNTENRVELVRWALQWG 70 >HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator protein (narP) Length = 208 Score = 45.4 bits (106), Expect = 3e-07 Identities = 22/51 (43%), Positives = 32/51 (62%) Query: 309 LSEREKEIVSLLAQGLRDRDIAEELHISESTVKFHVNGTLHKLNAKNRYQA 359 L++RE ++ +A GL ++ IA +L ISE TVK H+ L KLN +R A Sbjct: 149 LTDREMGVLRQIATGLSNKQIAAQLFISEETVKVHIRNLLRKLNVHSRVAA 199 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 44.7 bits (104), Expect = 5e-07 Identities = 20/48 (41%), Positives = 33/48 (68%) Query: 309 LSEREKEIVSLLAQGLRDRDIAEELHISESTVKFHVNGTLHKLNAKNR 356 L+ E +++ L+AQGL +R+IA+ L +S+ TV+ HV+ L+K NR Sbjct: 153 LTPTETKVIQLVAQGLANREIADHLKVSQRTVESHVSNMLNKTGLHNR 200 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.321 0.135 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,491 Number of Sequences: 78 Number of extensions: 1257 Number of successful extensions: 15 Number of sequences better than 1.0e-05: 9 Number of HSP's better than 0.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 6 Number of HSP's gapped (non-prelim): 9 length of query: 369 length of database: 48,235 effective HSP length: 64 effective length of query: 305 effective length of database: 43,243 effective search space: 13189115 effective search space used: 13189115 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 93 (40.4 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-000518 sll0789 (232 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-000518 sll0789 445 e-128 SYNE-PCC-01-000523 sll0797 239 7e-66 SYNE-PCC-01-002672 slr1837 148 1e-38 SYNE-PCC-01-002486 slr1584 146 5e-38 SYNE-PCC-01-000242 sll0396 144 2e-37 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 124 3e-31 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 120 3e-30 SYNE-PCC-01-001437 slr0081 117 2e-29 SYNE-PCC-01-000414 sll0649 107 3e-26 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 100 3e-24 SYNE-PCC-01-002033 slr0947 99 1e-23 SYNE-PCC-01-001461 slr0115 99 2e-23 SYNE-PCC-01-000877 sll1330 79 1e-17 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 79 2e-17 SYNE-PCC-01-002635 slr1783 64 4e-13 SYNE-PCC-01-002489 slr1588 59 1e-11 SYNE-PCC-01-001306 sll1905 58 3e-11 SYNE-PCC-01-002731 slr1909 56 1e-10 SYNE-PCC-01-000800 sll1228 51 4e-09 SYNE-PCC-01-001075 sll1592 50 5e-09 SYNE-PCC-01-002873 slr2098 49 1e-08 SYNE-PCC-01-002086 slr1042 49 1e-08 SYNE-PCC-01-001160 sll1708 48 2e-08 SYNE-PCC-01-001133 sll1673 48 3e-08 SYNE-PCC-01-002618 slr1760 45 2e-07 HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator pr... 44 5e-07 SYNE-PCC-01-002617 slr1759 43 8e-07 SYNE-PCC-01-002879 slr2104 43 1e-06 SYNE-PCC-01-002788 slr1982 42 2e-06 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 445 bits (1144), Expect = e-128 Identities = 220/232 (94%), Positives = 220/232 (94%) Query: 1 MRLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLS 60 MRLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLS Sbjct: 1 MRLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLS 60 Query: 61 GLELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAEXXXXXXXXXXX 120 GLELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAE Sbjct: 61 GLELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAELLARLRSLQRR 120 Query: 121 XPELQPQQLQVGQWWLDYGTFAVVTPEQARITLTAKEFQLLEYFMKHPQQILSSEQIKNQ 180 PELQPQQLQVGQWWLDYGTFAVVTPEQARITLTAKEFQLLEYFMKHPQQILSSEQIKNQ Sbjct: 121 SPELQPQQLQVGQWWLDYGTFAVVTPEQARITLTAKEFQLLEYFMKHPQQILSSEQIKNQ 180 Query: 181 LWALSAESTSNVVAAQVRLLRRKLEEYSHGNLIETVYGLGYRFQPHPTHAEQ 232 LWALSAESTSNVVAAQVRLLRRKLEEYSHGNLIETVYGLGYRFQPHPTHAEQ Sbjct: 181 LWALSAESTSNVVAAQVRLLRRKLEEYSHGNLIETVYGLGYRFQPHPTHAEQ 232 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 239 bits (609), Expect = 7e-66 Identities = 126/234 (53%), Positives = 158/234 (67%), Gaps = 7/234 (2%) Query: 1 MRLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLS 60 MR+LLVEDE DLGMA++K L E YVVDWV DG+ AW YL+ W YTLAI DW++PGLS Sbjct: 1 MRILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLS 60 Query: 61 GLELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAEXXXXXXXXXXX 120 GLELCQKLR Q +SLP+LMLTA + +RVEGLDAGADDYL KPF MAE Sbjct: 61 GLELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAELLARLRALQRR 120 Query: 121 XPELQPQQLQVGQWWLDYG----TFAVVTP---EQARITLTAKEFQLLEYFMKHPQQILS 173 P+ QPQ L +G + LD + + P E+ I LT +EFQ+ +Y M++P++I+S Sbjct: 121 SPQFQPQILTLGNFSLDPSNNLLSVTISEPLNLERQEIALTVREFQIFQYLMQNPERIIS 180 Query: 174 SEQIKNQLWALSAESTSNVVAAQVRLLRRKLEEYSHGNLIETVYGLGYRFQPHP 227 +I+ QLW L E SNVVAAQ+RL+RRKL + + I+TV G GYRF P Sbjct: 181 GSKIRQQLWDLDEEPMSNVVAAQMRLIRRKLAQQNCPCPIKTVPGQGYRFTLSP 234 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 148 bits (374), Expect = 1e-38 Identities = 94/232 (40%), Positives = 125/232 (53%), Gaps = 13/232 (5%) Query: 3 LLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSGL 62 +LLV+DE L L KAL + + +D G + G Y L I DWM+P +SGL Sbjct: 4 ILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAG--QYDLLILDWMLPQVSGL 61 Query: 63 ELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAE----------XXX 112 E+C+++R S P+L LTAKD + DRV GLDAG DDYLIKPF + E Sbjct: 62 EICRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFELRELLARVRALLRRQS 121 Query: 113 XXXXXXXXXPELQPQQLQVGQWWLDYGTFAVVTPEQARITLTAKEFQLLEYFMKHPQQIL 172 ++ L V LD V + RI L+ KE LL F++ P QIL Sbjct: 122 HGETITETLGAVKNNLLSVNNVSLDVAN-QVAYCQGQRIALSEKEVALLTLFLQAPGQIL 180 Query: 173 SSEQIKNQLWALSAESTSNVVAAQVRLLRRKLEEYSHGNLIETVYGLGYRFQ 224 S E+I + LW + +SNV+AA VRLLRRK+E+ + LI +VYG GY F+ Sbjct: 181 SHEEIYSHLWPGESPPSSNVLAALVRLLRRKIEQPNAPRLINSVYGKGYCFE 232 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 146 bits (369), Expect = 5e-38 Identities = 85/223 (38%), Positives = 124/223 (55%), Gaps = 4/223 (1%) Query: 1 MRLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLS 60 MR+LLVED+ L L +AL + Y VD D +LAW Y + + Y L I D M+P L Sbjct: 1 MRILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASR--LEYDLVILDVMLPELD 58 Query: 61 GLELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAEXXXXXXXXXXX 120 G+ LCQK R +PILM+TA+D I D++ GLDAGADDY++KP + E Sbjct: 59 GITLCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRR 118 Query: 121 XPELQPQQLQVGQWWLDYGTFAVVTPEQARITLTAKEFQLLEYFMKHPQQILSSEQIKNQ 180 L+ G LD T+ V + ++LT KE+ +LE +++ +++LS I + Sbjct: 119 GCATCQPVLEWGPIRLDPSTYEVSYDNEV-LSLTRKEYSILELLLRNGRRVLSRSMIIDS 177 Query: 181 LWALSAESTSNVVAAQVRLLRRKLEEYS-HGNLIETVYGLGYR 222 +W L + + V VR LR+KL+ + IETV+G+GYR Sbjct: 178 IWKLESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGYR 220 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 144 bits (363), Expect = 2e-37 Identities = 82/220 (37%), Positives = 122/220 (55%), Gaps = 3/220 (1%) Query: 2 RLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSG 61 R+L+VE+E L +E L+ E Y V +DG ++ + L I + +PG+SG Sbjct: 4 RVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQE--FPPDLIIVNGALPGMSG 61 Query: 62 LELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAEXXXXXXXXXXXX 121 LELC++LR S +PI+++TAKD + +RV GLDAGADDY++KPF E Sbjct: 62 LELCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRRT 121 Query: 122 PELQPQQLQVGQWWLDYGTFAVVTPEQARITLTAKEFQLLEYFMKHPQQILSSEQIKNQL 181 + LQ + T + ++ I LTAKEF+LL+Y + H +Q+L+ EQI ++ Sbjct: 122 HTTSDEVLQFADLRFNRSTREIQRGDRL-IDLTAKEFELLDYLLSHARQVLTREQILERV 180 Query: 182 WALSAESTSNVVAAQVRLLRRKLEEYSHGNLIETVYGLGY 221 W SN++ +R LR KLE LI+TV G+GY Sbjct: 181 WGYDFMGDSNIIEVYIRYLRLKLEAAGEPRLIQTVRGVGY 220 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 124 bits (311), Expect = 3e-31 Identities = 77/227 (33%), Positives = 121/227 (53%), Gaps = 6/227 (2%) Query: 2 RLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSG 61 ++L+VEDE + + L ++ Y V D A + + + N L + DWM+PG SG Sbjct: 4 KILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKE---NPKLILLDWMLPGRSG 60 Query: 62 LELCQKLRGQRS--SLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAEXXXXXXXXXX 119 ++ Q ++ Q S ++PI+MLTAK D + L+AGADDY+ KPF Sbjct: 61 IQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWR 120 Query: 120 XXPELQPQQLQVGQWWLDYGTFAVVTPEQARITLTAKEFQLLEYFMKHPQQILSSEQIKN 179 E Q Q +Q+ + +D V +Q I L++ EF+LL +FM+HP+++ S EQ+ N Sbjct: 121 RIYEQQSQFIQIDELSIDENAQRVFFQQQ-EINLSSTEFKLLHFFMRHPEKVYSREQLLN 179 Query: 180 QLWALSAESTSNVVAAQVRLLRRKLEEYSHGNLIETVYGLGYRFQPH 226 ++W E V + +R LRR L + + I+TV G GYRF + Sbjct: 180 RIWHNDLEVEYRTVDSYIRRLRRNLAPFQCEHYIQTVRGSGYRFSSY 226 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 120 bits (302), Expect = 3e-30 Identities = 74/221 (33%), Positives = 116/221 (52%), Gaps = 7/221 (3%) Query: 1 MRLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLS 60 MR+LL+ED+ +G L+ L + + VDW DG + L Y + D +P L Sbjct: 1 MRILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSA--PYDAVVLDLTLPKLD 58 Query: 61 GLELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAEXXXXXXXXXXX 120 GLE+ Q+ R +P+L+LTA+D + +RV+GL +GADDYL KPF +AE Sbjct: 59 GLEVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRR 118 Query: 121 XPELQPQQLQVGQWWLDYGTFAVVTPEQARITLTAKEFQLLEYFMKHPQQILSSEQIKNQ 180 ++ LD +V Q I+LT++E++LLE FM + ++LS I+ + Sbjct: 119 RYGYHHSVIEQAGVKLDQNQRSVWLNNQP-ISLTSREYKLLELFMLNKDRVLSRSSIEEK 177 Query: 181 LWALSAESTSNVVAAQVRLLRRKLEEYSHGNLIETVYGLGY 221 L + E +S + + LR+KL + I TV+G+GY Sbjct: 178 LSSWDEEISSGALDVHIYNLRQKLGK----QFIRTVHGVGY 214 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 117 bits (294), Expect = 2e-29 Identities = 80/237 (33%), Positives = 121/237 (51%), Gaps = 22/237 (9%) Query: 2 RLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYL-----DQGWVNYTLAIFDWMV 56 R+L+VEDE + + +L+ E Y V V DG A + L D G L I D M+ Sbjct: 32 RILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIML 91 Query: 57 PGLSGLELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAEXXXXXXX 116 P ++GL++C+ LR + PIL+++AK ++V GL+ GADDY+ KPF + E Sbjct: 92 PQVNGLDVCRSLRFGGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARCRA 151 Query: 117 XXXXXPELQPQQLQVGQWWLDYGTF--AVVTPEQAR-------ITLTAKEFQLLEYFMKH 167 + +Q G + F V+ P++ R ++L KEF+LLE FM + Sbjct: 152 -------MIRRQGLAGNNIAPFRKFRDLVLYPQECRVLMRGEEVSLAPKEFRLLELFMSY 204 Query: 168 PQQILSSEQIKNQLWALSAESTSNVVAAQVRLLRRKLE-EYSHGNLIETVYGLGYRF 223 P+++ S EQ+ +W + S V +R LR KLE + S + TV G GYRF Sbjct: 205 PRRVWSREQLIEHIWGIDFMGDSKTVDVHIRWLREKLEQDPSQPEYLVTVRGFGYRF 261 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 107 bits (267), Expect = 3e-26 Identities = 76/238 (31%), Positives = 115/238 (48%), Gaps = 25/238 (10%) Query: 3 LLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSGL 62 +L+VED+ ++ + + L RE + DG + + L + D M+P L GL Sbjct: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPD--LIVLDLMLPKLDGL 71 Query: 63 ELCQKLRGQRSSLP--ILMLTAKDQIADRVEGLDAGADDYLIKPFGMAEXXXXXXXXXXX 120 E+C ++R Q S ILMLTAK + DR+ GL GADDYL+KPF E Sbjct: 72 EVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRA---- 127 Query: 121 XPELQPQQLQVGQ----------WWLD---YGTFAVVTPEQARITLTAKEFQLLEYFMKH 167 L +QL+ GQ + +D + Q + LT EF LL FM + Sbjct: 128 ---LLRRQLRQGQPVGQIYRTNHFQVDLDQHQASRYQGDRQEELELTGLEFNLLATFMSY 184 Query: 168 PQQILSSEQIKNQLWALSAESTSNVVAAQVRLLRRKLE-EYSHGNLIETVYGLGYRFQ 224 P ++ + Q+ +LW VV +R LR+K+E + ++ I+TV GLGY+F+ Sbjct: 185 PGRVWNRTQLIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGYKFE 242 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 100 bits (250), Expect = 3e-24 Identities = 66/230 (28%), Positives = 114/230 (49%), Gaps = 11/230 (4%) Query: 2 RLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSG 61 ++L+VEDE L+ E Y V ++G L +N L + D +PG +G Sbjct: 5 KILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNIN--LVVMDINLPGKNG 62 Query: 62 LELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAEXXXXXXXXXXXX 121 L L ++LR + SLP++ LT +D D++ GL+ GADDYL KPF E Sbjct: 63 LLLARELR-EELSLPLIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHRA 121 Query: 122 PELQPQQLQVGQ-------WWLDYGTFAVVTPEQARITLTAKEFQLLEYFMKHPQQILSS 174 Q ++ G+ W LD + +++TPE L EF+ + +F ++P ++ + Sbjct: 122 MPHQEKENTFGREFYRFNGWKLDLNSHSLITPEGQEFKLPRSEFRAMLHFCENPGKLQTR 181 Query: 175 EQIKNQLWALSAESTSNVVAAQVRLLRRKLEEYSH-GNLIETVYGLGYRF 223 E++ ++ + V +R +R+ E++ + N+I T++G GYRF Sbjct: 182 EELLKKMTGRELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGYRF 231 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 99.0 bits (245), Expect = 1e-23 Identities = 76/229 (33%), Positives = 108/229 (47%), Gaps = 13/229 (5%) Query: 5 LVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSGLEL 64 +V+DE + LE L Y V DG A + + + L + D M+P L G + Sbjct: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHES--DPDLVVLDVMMPKLDGYGV 58 Query: 65 CQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAEXXXXXXXXXXXXPE- 123 CQ+LR + S +PI+MLTA +ADR+ GL+ GADDY++KPF E + Sbjct: 59 CQELR-KESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKN 117 Query: 124 -----LQPQQLQVGQWWLDYGTFAVVTPEQARITLTAKEFQLLEYFMKHPQQILSSEQIK 178 LQ+ +D V ++ RI LT EF LLE + + S +I Sbjct: 118 GMPGIPSSGVLQIATIRIDTNKRQVYKGDE-RIRLTGMEFSLLELLVSRSGEPFSRSEIL 176 Query: 179 NQLWALSAES--TSNVVAAQVRLLRRKLEE-YSHGNLIETVYGLGYRFQ 224 ++W + E + VV + LR KLEE S+ LI T G GY FQ Sbjct: 177 QEVWGYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGYLFQ 225 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 98.6 bits (244), Expect = 2e-23 Identities = 71/230 (30%), Positives = 109/230 (47%), Gaps = 15/230 (6%) Query: 2 RLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSG 61 R+L+++D+P + + L Y V DG + Q + L + D M+P + G Sbjct: 3 RILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQ--LQPDLIMLDLMLPKVDG 60 Query: 62 LELCQKLRGQR--SSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAEXXXXXXXXXX 119 +CQ+LR + +P+LMLTA QI D+++G D+GADDYL KPF + E Sbjct: 61 FTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLR 120 Query: 120 XXPELQPQQLQVGQWWLDYGTFAVVTPEQ-------ARITLTAKEFQLLEYFMKHPQQIL 172 + PQ + + L+ G +V PE+ I LT EF+LL ++ Q + Sbjct: 121 RTDRI-PQAAKHSE-ILNQGPLTLV-PERFEAIWFGKSIKLTHLEFELLHCLLQRHGQTV 177 Query: 173 SSEQIKNQLWALSAESTSNVVAAQVRLLRRKLE-EYSHGNLIETVYGLGY 221 S I ++W + + +R LR KLE I+TVYG GY Sbjct: 178 SPSDILREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTVYGAGY 227 >SYNE-PCC-01-000877 sll1330 Length = 250 Score = 79.3 bits (194), Expect = 1e-17 Identities = 73/228 (32%), Positives = 102/228 (44%), Gaps = 21/228 (9%) Query: 5 LVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNY--TLAIFDWMVPGLSGL 62 +VE P L L L++ Y+V + A Q + N TLA+ D + G+ Sbjct: 8 VVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQA----RQAFNNQLPTLAVIDSDLTDGDGI 63 Query: 63 ELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAEXXXXXXXXXXXXP 122 ELC+ L Q S+ I +L+AKD D V GL AGADDYL KPFGM E Sbjct: 64 ELCRWLYQQHQSM-IFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRRVR 122 Query: 123 ELQPQQLQVGQWWLDYGTFAV------VTPEQARITLTAKEFQLLEYFMKHPQQILSSEQ 176 + L LDYG + V + + LT +EF LL + LS + Sbjct: 123 TVAAPLL------LDYGVLKIDLVQRRVEYQGNFVDLTPQEFSLLYVLTQAEGSALSRTE 176 Query: 177 IKNQLWALSAESTSNVVAAQVRLLRRKLE-EYSHGNLIETVYGLGYRF 223 + + W A + V LR+K+E + +LI+TV +GYRF Sbjct: 177 LLRRAWP-EAIDNPRTIDTHVLSLRKKIETDPRQPSLIQTVRNVGYRF 223 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 78.6 bits (192), Expect = 2e-17 Identities = 62/225 (27%), Positives = 108/225 (48%), Gaps = 9/225 (4%) Query: 2 RLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSG 61 +LLLV+D+ +L L L E + V+ +G A L++ +Y L + D M+P L+G Sbjct: 3 KLLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKLNE---SYKLVLLDVMMPKLNG 59 Query: 62 LELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAEXXXXXXXXXXXX 121 +E +++R + S++P++MLTA+ + DRV GL+ GADD L KPF E Sbjct: 60 IETLKEIR-KVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRRS 118 Query: 122 PELQPQQLQVGQWWLD----YGTFAVVTPEQARITLTAKEFQLLEYFMKHPQQILSSEQI 177 V D + + + T + + LT EF++L +K ++S E++ Sbjct: 119 ASPSNNISNVEILSFDGITLHFSHGIATYNEENLNLTDYEFKILCLLLKSKGNVVSREEL 178 Query: 178 KNQLWALSAESTSNVVAAQVRLLRRKL-EEYSHGNLIETVYGLGY 221 ++ + + LRRKL + + + +T+ G GY Sbjct: 179 SLEVMEKPLTPFDRSLDMHISNLRRKLPKRKNKPSWFKTLRGKGY 223 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 63.9 bits (154), Expect = 4e-13 Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 5/106 (4%) Query: 3 LLLVEDEPDLGMALEKALRRE-NYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSG 61 LLLV+DEP + +++ L ++ VD + AW YL L I D M+P + G Sbjct: 58 LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLP--ALVISDIMMPQVDG 115 Query: 62 LELCQKLR--GQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPF 105 + QKLR + SLP++ LTA+ DR++G G D +L KPF Sbjct: 116 YQFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPF 161 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 59.3 bits (142), Expect = 1e-11 Identities = 37/105 (35%), Positives = 60/105 (57%), Gaps = 2/105 (1%) Query: 3 LLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSGL 62 +L+VEDE + + + L ENY + ++G +A L+ V L I D M+P + G Sbjct: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 Query: 63 ELCQKLR--GQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPF 105 L L+ + +++P + LTA + D +G+++GADDYLIKPF Sbjct: 64 GLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPF 108 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 57.8 bits (138), Expect = 3e-11 Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 4/109 (3%) Query: 3 LLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSGL 62 +L+V+D + + + L E Y +V G A + Q + L + D M+PG+ GL Sbjct: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQPD--LILLDLMMPGMDGL 77 Query: 63 ELCQKLRG--QRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAE 109 E+C +L+ Q +P++ LTA ++ D ++ GA DY+ KPF E Sbjct: 78 EVCDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPE 126 Score = 44.3 bits (103), Expect = 3e-07 Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 5/107 (4%) Query: 1 MRLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLS 60 + +LL ED + L++ Y VD V +G A S L +G +Y + + D +P + Sbjct: 740 LTILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKG--DYDVVLMDVEMPEMD 797 Query: 61 GLELCQKLRGQ--RSSLP-ILMLTAKDQIADRVEGLDAGADDYLIKP 104 GL + +R RS P I+ +TA DR L +G +DY+ KP Sbjct: 798 GLTATEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKP 844 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 55.8 bits (133), Expect = 1e-10 Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 4/105 (3%) Query: 3 LLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSGL 62 LLLV+D+P+L + ++ L + Y V +G A L + + + D M+P + G Sbjct: 10 LLLVDDDPNLLLLVKDYLEYQGYQVTTAGNGREALDLLTTTVPD--MIVCDIMMPEMDGY 67 Query: 63 ELCQKLRGQR--SSLPILMLTAKDQIADRVEGLDAGADDYLIKPF 105 +++R S +P++ L+AK Q +RV+GL+ GAD Y+ KPF Sbjct: 68 AFIEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPF 112 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 50.8 bits (120), Expect = 4e-09 Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 4/106 (3%) Query: 2 RLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSG 61 ++L+V+D P+ + L + L +VV ++G +A + L + W + + + D +P L G Sbjct: 419 KVLVVDDRPESRLLLRQLLTSLGFVVQEAENGEMAIA-LWESW-HPQVILMDMQMPVLDG 476 Query: 62 LELCQKLRG--QRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPF 105 QK++ Q I+ LTA +R E L AG DD+L KPF Sbjct: 477 RSTTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPF 522 >SYNE-PCC-01-001075 sll1592 Length = 226 Score = 50.4 bits (119), Expect = 5e-09 Identities = 53/213 (24%), Positives = 91/213 (42%), Gaps = 21/213 (9%) Query: 1 MRLLLVEDEPDLGMALEKALRRENY--VVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPG 58 +R+LLVED+ + L L +E V +DG A +Y++Q + + I D +PG Sbjct: 8 IRILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQL--FDVVILDVGLPG 65 Query: 59 LSGLELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAEXXXXXXXXX 118 + G+E C +++ LP+L+LT+ Q A ++A A Y +K G+A Sbjct: 66 IGGIEACHQIKKIHPQLPVLILTSHSQPALINRLIEAQAQGYCVK--GVAAETLVLAIRS 123 Query: 119 XXX-----PELQPQQLQVG-QWWLDYGTFAVVTPEQARITLTAKEFQLLEYFMKHPQQIL 172 + Q++Q Q G + LT +E ++L K Sbjct: 124 VAAGAFWWDAIASQEIQTAFQHSSSTGAVLPLADADGENPLTKRELEILSLVAKGK---- 179 Query: 173 SSEQIKNQLWALSAESTSNVVAAQVRLLRRKLE 205 S+++I ++L+ V V + RKLE Sbjct: 180 SNQEIADELYI-----APGTVRVHVHTILRKLE 207 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 49.3 bits (116), Expect = 1e-08 Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 5/108 (4%) Query: 2 RLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYL---DQGWVNYTLAIFDWMVPG 58 R+L+V+D + ++ L + +VV+ V+ G A ++L D+ +++ DW +P Sbjct: 772 RVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPN 831 Query: 59 LSGLELCQKLR--GQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKP 104 + GLE+ ++L+ G I ++TA + V+ G DD L+KP Sbjct: 832 MDGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKP 879 Score = 46.6 bits (109), Expect = 7e-08 Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 4/105 (3%) Query: 2 RLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSG 61 R+LLVED + LR + VD +G +A L+ Y L + D +P + G Sbjct: 926 RILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNN--AYALVLMDMQMPEMDG 983 Query: 62 LELCQKLRG--QRSSLPILMLTAKDQIADRVEGLDAGADDYLIKP 104 +E +R + + LPI+ +TA DR L AG +D+L KP Sbjct: 984 IEATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKP 1028 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 49.3 bits (116), Expect = 1e-08 Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 4/105 (3%) Query: 3 LLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSGL 62 +LLVED + L+ + V DG A L + L + D ++P ++G Sbjct: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQN--FSPDLVVLDIVMPRMNGY 87 Query: 63 ELCQKLRG--QRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPF 105 E+C++++ + ++P++M ++K + DR G+ GAD Y+ KPF Sbjct: 88 EVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPF 132 >SYNE-PCC-01-001160 sll1708 Length = 226 Score = 48.1 bits (113), Expect = 2e-08 Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 6/134 (4%) Query: 1 MRLLLVEDEPDLGMALEKAL-RRENY-VVDWVQDGNLAWSYLDQGWV-NYTLAIFDWMVP 57 M++L+VED+P + + LE+AL E + ++ V +G + + Q V N L + D +P Sbjct: 17 MKILIVEDDPLMQLGLEQALGAHERFEIIGRVDNG---YGAVQQAAVLNPDLIVMDIGLP 73 Query: 58 GLSGLELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAEXXXXXXXX 117 GL G+E ++++ + I++LT+ + + L +GAD Y +K + Sbjct: 74 GLDGIEATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIAAA 133 Query: 118 XXXXPELQPQQLQV 131 L PQ +V Sbjct: 134 QDGATYLDPQIARV 147 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 47.8 bits (112), Expect = 3e-08 Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 4/109 (3%) Query: 3 LLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSGL 62 +LLV+D P+ L L Y V V G +A L + L + D +P + G Sbjct: 11 ILLVDDLPNNLQLLSDLLINLGYTVRSVTSGKMALRTLQVKRPD--LILLDIKMPDMDGY 68 Query: 63 ELCQKLRGQRS--SLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAE 109 ++C+ ++ + +PI+ ++A D+V+ + G DY+ KPF + E Sbjct: 69 QVCEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQIEE 117 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 45.1 bits (105), Expect = 2e-07 Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 4/109 (3%) Query: 2 RLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSG 61 ++L+V+D+ + M L L++E + V+ +G A + + + + + D ++P + G Sbjct: 13 KILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAE--IKPEVVLLDAVMPVMDG 70 Query: 62 LELCQKLRG--QRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMA 108 CQ L Q S +LM+T D A +AGA DY+ KP A Sbjct: 71 FACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWA 119 >HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator protein (narP) Length = 208 Score = 43.9 bits (102), Expect = 5e-07 Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 4/105 (3%) Query: 1 MRLLLVEDEPDLGMALEKALRRENY--VVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPG 58 +++LL++D P + +++ + ++ VV V G S Q + + I D + G Sbjct: 5 LKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQ--TSPDVIILDLNMKG 62 Query: 59 LSGLELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIK 103 LSGL+ + LR + IL+LT D D +DAGAD YL+K Sbjct: 63 LSGLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLK 107 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 43.1 bits (100), Expect = 8e-07 Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 11/113 (9%) Query: 1 MRLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLS 60 +++LL ED + L Y V +G L++ + Y L + D +P + Sbjct: 1190 LQILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKF--YDLVLMDMQMPVMD 1247 Query: 61 GLELCQKLRGQRSSLP------ILMLTAKDQIADRVEGLDAGADDYLIKPFGM 107 G+ C+ +R +LP I+ +TA DR E LDAG D Y+ KP + Sbjct: 1248 GITACRHIR---QTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISI 1297 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 42.7 bits (99), Expect = 1e-06 Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 4/104 (3%) Query: 3 LLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSGL 62 +LLVED L + V +G A + L Y + D +P L+G Sbjct: 720 ILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSN--TYDAILMDIQMPMLNGY 777 Query: 63 ELCQKLRGQR--SSLPILMLTAKDQIADRVEGLDAGADDYLIKP 104 + + +R Q +LPI+ +TA D+ + LDAG +D+L KP Sbjct: 778 DATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKP 821 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 42.0 bits (97), Expect = 2e-06 Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 4/105 (3%) Query: 2 RLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSG 61 ++LLVED L + L R+ Y V DG A + + L + D +P + G Sbjct: 6 KVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISE--SPQLILMDMSLPIIDG 63 Query: 62 LELCQKLRGQRSS--LPILMLTAKDQIADRVEGLDAGADDYLIKP 104 ++++G +PI+ LTA +DR + AG DDY KP Sbjct: 64 WTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKP 108 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.319 0.136 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,453 Number of Sequences: 78 Number of extensions: 885 Number of successful extensions: 77 Number of sequences better than 1.0e-05: 29 Number of HSP's better than 0.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 13 Number of HSP's that attempted gapping in prelim test: 18 Number of HSP's gapped (non-prelim): 34 length of query: 232 length of database: 48,235 effective HSP length: 60 effective length of query: 172 effective length of database: 43,555 effective search space: 7491460 effective search space used: 7491460 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 91 (39.7 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-000523 sll0797 (234 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-000523 sll0797 445 e-128 SYNE-PCC-01-000518 sll0789 240 3e-66 SYNE-PCC-01-002486 slr1584 139 8e-36 SYNE-PCC-01-002672 slr1837 137 2e-35 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 122 1e-30 SYNE-PCC-01-000242 sll0396 117 3e-29 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 112 1e-27 SYNE-PCC-01-001437 slr0081 105 2e-25 SYNE-PCC-01-000414 sll0649 103 6e-25 SYNE-PCC-01-001461 slr0115 92 2e-21 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 90 7e-21 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 87 4e-20 SYNE-PCC-01-002033 slr0947 80 6e-18 SYNE-PCC-01-002635 slr1783 67 5e-14 SYNE-PCC-01-000877 sll1330 67 7e-14 SYNE-PCC-01-001306 sll1905 64 3e-13 SYNE-PCC-01-002873 slr2098 62 1e-12 SYNE-PCC-01-002731 slr1909 61 3e-12 SYNE-PCC-01-002086 slr1042 59 1e-11 SYNE-PCC-01-001133 sll1673 56 9e-11 SYNE-PCC-01-002489 slr1588 56 1e-10 SYNE-PCC-01-002617 slr1759 55 2e-10 SYNE-PCC-01-000800 sll1228 52 2e-09 SYNE-PCC-01-002618 slr1760 49 1e-08 SYNE-PCC-01-001075 sll1592 47 7e-08 SYNE-PCC-01-001132 sll1672 46 1e-07 SYNE-PCC-01-002879 slr2104 45 3e-07 SYNE-PCC-01-002788 slr1982 45 3e-07 SYNE-PCC-01-001160 sll1708 43 8e-07 HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator pr... 42 2e-06 SYNE-PCC-01-002221 slr1213 41 3e-06 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 445 bits (1145), Expect = e-128 Identities = 223/234 (95%), Positives = 223/234 (95%) Query: 1 MRILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLS 60 MRILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLS Sbjct: 1 MRILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLS 60 Query: 61 GLELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAEXXXXXXXXXXX 120 GLELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAE Sbjct: 61 GLELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAELLARLRALQRR 120 Query: 121 SPQFQPQILTLGNFSLDPSNNLLSVTISEPLNLERQEIALTVREFQIFQYLMQNPERIIS 180 SPQFQPQILTLGNFSLDPSNNLLSVTISEPLNLERQEIALTVREFQIFQYLMQNPERIIS Sbjct: 121 SPQFQPQILTLGNFSLDPSNNLLSVTISEPLNLERQEIALTVREFQIFQYLMQNPERIIS 180 Query: 181 GSKIRQQLWDLDEEPMSNVVAAQMRLIRRKLAQQNCPCPIKTVPGQGYRFTLSP 234 GSKIRQQLWDLDEEPMSNVVAAQMRLIRRKLAQQNCPCPIKTVPGQGYRFTLSP Sbjct: 181 GSKIRQQLWDLDEEPMSNVVAAQMRLIRRKLAQQNCPCPIKTVPGQGYRFTLSP 234 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 240 bits (613), Expect = 3e-66 Identities = 127/234 (54%), Positives = 159/234 (67%), Gaps = 7/234 (2%) Query: 1 MRILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLS 60 MR+LLVEDE DLGMA++K L E YVVDWV DG+ AW YL+ W YTLAI DW++PGLS Sbjct: 1 MRLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLS 60 Query: 61 GLELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAEXXXXXXXXXXX 120 GLELCQKLR Q +SLP+LMLTA + +RVEGLDAGADDYL KPF MAE Sbjct: 61 GLELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAELLARLRSLQRR 120 Query: 121 SPQFQPQILTLGNFSLDPSNNLLSVTISEPLNLERQEIALTVREFQIFQYLMQNPERIIS 180 SP+ QPQ L +G + LD + + P E+ I LT +EFQ+ +Y M++P++I+S Sbjct: 121 SPELQPQQLQVGQWWLDYG----TFAVVTP---EQARITLTAKEFQLLEYFMKHPQQILS 173 Query: 181 GSKIRQQLWDLDEEPMSNVVAAQMRLIRRKLAQQNCPCPIKTVPGQGYRFTLSP 234 +I+ QLW L E SNVVAAQ+RL+RRKL + + I+TV G GYRF P Sbjct: 174 SEQIKNQLWALSAESTSNVVAAQVRLLRRKLEEYSHGNLIETVYGLGYRFQPHP 227 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 139 bits (350), Expect = 8e-36 Identities = 82/230 (35%), Positives = 120/230 (52%), Gaps = 11/230 (4%) Query: 1 MRILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLS 60 MRILLVED+ L + + L + Y VD TD S AWDY EY L I+D +LP L Sbjct: 1 MRILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASR--LEYDLVILDVMLPELD 58 Query: 61 GLELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAEXXXXXXXXXXX 120 G+ LCQK R+ +P+LM+TA +++ GLDAGADDY+ KP + E Sbjct: 59 GITLCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRR 118 Query: 121 SPQFQPQILTLGNFSLDPSNNLLSVTISEPLNLERQEIALTVREFQIFQYLMQNPERIIS 180 +L G LDPS + ++ + + ++LT +E+ I + L++N R++S Sbjct: 119 GCATCQPVLEWGPIRLDPS--------TYEVSYDNEVLSLTRKEYSILELLLRNGRRVLS 170 Query: 181 GSKIRQQLWDLDEEPMSNVVAAQMRLIRRKLAQQNCPC-PIKTVPGQGYR 229 S I +W L+ P + V +R +R+KL I+TV G GYR Sbjct: 171 RSMIIDSIWKLESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGYR 220 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 137 bits (346), Expect = 2e-35 Identities = 88/234 (37%), Positives = 123/234 (52%), Gaps = 12/234 (5%) Query: 3 ILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSGL 62 ILLV+DE L + K L + + +D G +Y L I+DW+LP +SGL Sbjct: 4 ILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAG--QYDLLILDWMLPQVSGL 61 Query: 63 ELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAEXXXXXXXXXXXSP 122 E+C+++R G+S PVL LTA ++RV GLDAG DDYL KPF + E Sbjct: 62 EICRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFELRELLARVRALLRRQS 121 Query: 123 QFQPQILTLGNFSLDPSNNLLSV------TISEPLNLERQEIALTVREFQIFQYLMQNPE 176 + TLG NNLLSV ++ + Q IAL+ +E + +Q P Sbjct: 122 HGETITETLGAV----KNNLLSVNNVSLDVANQVAYCQGQRIALSEKEVALLTLFLQAPG 177 Query: 177 RIISGSKIRQQLWDLDEEPMSNVVAAQMRLIRRKLAQQNCPCPIKTVPGQGYRF 230 +I+S +I LW + P SNV+AA +RL+RRK+ Q N P I +V G+GY F Sbjct: 178 QILSHEEIYSHLWPGESPPSSNVLAALVRLLRRKIEQPNAPRLINSVYGKGYCF 231 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 122 bits (306), Expect = 1e-30 Identities = 80/228 (35%), Positives = 117/228 (51%), Gaps = 14/228 (6%) Query: 1 MRILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLS 60 MRILL+ED+ +G ++ L + VDW TDG L + Y ++D LP L Sbjct: 1 MRILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTS--APYDAVVLDLTLPKLD 58 Query: 61 GLELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAEXXXXXXXXXXX 120 GLE+ Q+ R+ +PVL+LTA + RV+GL +GADDYL KPF +AE Sbjct: 59 GLEVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRR 118 Query: 121 SPQFQPQILTLGNFSLDPSNNLLSVTISEPLNLERQEIALTVREFQIFQYLMQNPERIIS 180 + ++ LD N SV L Q I+LT RE+++ + M N +R++S Sbjct: 119 RYGYHHSVIEQAGVKLD--QNQRSVW------LNNQPISLTSREYKLLELFMLNKDRVLS 170 Query: 181 GSKIRQQLWDLDEEPMSNVVAAQMRLIRRKLAQQNCPCPIKTVPGQGY 228 S I ++L DEE S + + +R+KL +Q I+TV G GY Sbjct: 171 RSSIEEKLSSWDEEISSGALDVHIYNLRQKLGKQF----IRTVHGVGY 214 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 117 bits (294), Expect = 3e-29 Identities = 72/227 (31%), Positives = 118/227 (51%), Gaps = 10/227 (4%) Query: 2 RILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSG 61 R+L+VE+E L ++ L E Y V DG + + + Q L IV+ LPG+SG Sbjct: 4 RVLVVEEEEKLARFMELELKYEGYDVSVARDGLKG--FTQAQEFPPDLIIVNGALPGMSG 61 Query: 62 LELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAEXXXXXXXXXXXS 121 LELC++LR G+ +P++++TA + E RV GLDAGADDY+ KPF E + Sbjct: 62 LELCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRRT 121 Query: 122 PQFQPQILTLGNFSLDPSNNLLSVTISEPLNLERQEIALTVREFQIFQYLMQNPERIISG 181 ++L + + S + + + I LT +EF++ YL+ + ++++ Sbjct: 122 HTTSDEVLQFADLRFNRS--------TREIQRGDRLIDLTAKEFELLDYLLSHARQVLTR 173 Query: 182 SKIRQQLWDLDEEPMSNVVAAQMRLIRRKLAQQNCPCPIKTVPGQGY 228 +I +++W D SN++ +R +R KL P I+TV G GY Sbjct: 174 EQILERVWGYDFMGDSNIIEVYIRYLRLKLEAAGEPRLIQTVRGVGY 220 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 112 bits (279), Expect = 1e-27 Identities = 71/232 (30%), Positives = 122/232 (52%), Gaps = 13/232 (5%) Query: 2 RILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSG 61 +IL+VEDE + I L + Y V +D A + ++ L ++DW+LPG SG Sbjct: 4 KILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKEN---PKLILLDWMLPGRSG 60 Query: 62 LELCQKLRTQGN--SLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAEXXXXXXXXXX 119 ++ Q ++ Q + ++P++MLTA E+ + L+AGADDY+TKPF Sbjct: 61 IQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWR 120 Query: 120 XSPQFQPQILTLGNFSLDPSNNLLSVTISEPLNLERQEIALTVREFQIFQYLMQNPERII 179 + Q Q + + S+D + ++ + ++QEI L+ EF++ + M++PE++ Sbjct: 121 RIYEQQSQFIQIDELSIDEN--------AQRVFFQQQEINLSSTEFKLLHFFMRHPEKVY 172 Query: 180 SGSKIRQQLWDLDEEPMSNVVAAQMRLIRRKLAQQNCPCPIKTVPGQGYRFT 231 S ++ ++W D E V + +R +RR LA C I+TV G GYRF+ Sbjct: 173 SREQLLNRIWHNDLEVEYRTVDSYIRRLRRNLAPFQCEHYIQTVRGSGYRFS 224 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 105 bits (261), Expect = 2e-25 Identities = 74/236 (31%), Positives = 118/236 (50%), Gaps = 13/236 (5%) Query: 2 RILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTE------YTLAIVDWL 55 RIL+VEDE + I L E Y V V DG A L+ +++E L I+D + Sbjct: 32 RILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQ-EFSEDPGQAAVDLIILDIM 90 Query: 56 LPGLSGLELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAEXXXXXX 115 LP ++GL++C+ LR G++ P+L+++A G +V GL+ GADDY+TKPF + E Sbjct: 91 LPQVNGLDVCRSLRFGGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARCR 150 Query: 116 XXXXXSPQFQPQILTLGNFSLDPSNNLLSVTISEPLNLERQEIALTVREFQIFQYLMQNP 175 I F +L+ + + +E++L +EF++ + M P Sbjct: 151 AMIRRQGLAGNNIAPFRKF-----RDLVLYPQECRVLMRGEEVSLAPKEFRLLELFMSYP 205 Query: 176 ERIISGSKIRQQLWDLDEEPMSNVVAAQMRLIRRKLAQQ-NCPCPIKTVPGQGYRF 230 R+ S ++ + +W +D S V +R +R KL Q + P + TV G GYRF Sbjct: 206 RRVWSREQLIEHIWGIDFMGDSKTVDVHIRWLREKLEQDPSQPEYLVTVRGFGYRF 261 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 103 bits (256), Expect = 6e-25 Identities = 76/234 (32%), Positives = 115/234 (49%), Gaps = 12/234 (5%) Query: 3 ILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSGL 62 IL+VED+ ++ I++ L E++ DG + Q + L ++D +LP L GL Sbjct: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPD--LIVLDLMLPKLDGL 71 Query: 63 ELCQKLRTQGNSLP--VLMLTALGEPENRVEGLDAGADDYLTKPFVMAEXXXXXXXXXXX 120 E+C ++R Q S +LMLTA GE +R+ GL GADDYL KPF E Sbjct: 72 EVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRALLRR 131 Query: 121 S-PQFQP--QILTLGNFSLDPSNNLLSVTISEPLNLERQEIALTVREFQIFQYLMQNPER 177 Q QP QI +F +D + S + ++E+ LT EF + M P R Sbjct: 132 QLRQGQPVGQIYRTNHFQVDLDQHQASRYQGD----RQEELELTGLEFNLLATFMSYPGR 187 Query: 178 IISGSKIRQQLWDLDEEPMSNVVAAQMRLIRRKLAQQNC-PCPIKTVPGQGYRF 230 + + +++ ++LW D VV +R +R+K+ P IKTV G GY+F Sbjct: 188 VWNRTQLIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGYKF 241 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 91.7 bits (226), Expect = 2e-21 Identities = 70/240 (29%), Positives = 114/240 (47%), Gaps = 18/240 (7%) Query: 2 RILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSG 61 RIL+++D+ + + L Y V DG + + L ++D +LP + G Sbjct: 3 RILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPD--LIMLDLMLPKVDG 60 Query: 62 LELCQKLRTQGNS--LPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAEXXXXXXXXXX 119 +CQ+LR + +PVLMLTALG+ +++++G D+GADDYLTKPF + E Sbjct: 61 FTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLR 120 Query: 120 XSPQF-----QPQILTLGNFSLDPSNNLLSVTISEPLNLERQEIALTVREFQIFQYLMQN 174 + + +IL G +L P ++ + I LT EF++ L+Q Sbjct: 121 RTDRIPQAAKHSEILNQGPLTLVP-ERFEAIWFG-------KSIKLTHLEFELLHCLLQR 172 Query: 175 PERIISGSKIRQQLWDLDEEPMSNVVAAQMRLIRRKL-AQQNCPCPIKTVPGQGYRFTLS 233 + +S S I +++W + + + +R +R KL P IKTV G GY LS Sbjct: 173 HGQTVSPSDILREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTVYGAGYCLELS 232 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 89.7 bits (221), Expect = 7e-21 Identities = 67/230 (29%), Positives = 108/230 (46%), Gaps = 4/230 (1%) Query: 2 RILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSG 61 +IL+VEDE +K + +E Y V +G + L N L ++D LPG +G Sbjct: 5 KILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANH--NINLVVMDINLPGKNG 62 Query: 62 LELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAEXXXXXXXXXXXS 121 L L ++LR + SLP++ LT +++ GL+ GADDYLTKPF E + Sbjct: 63 LLLARELREE-LSLPLIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHRA 121 Query: 122 PQFQPQILTLGNFSLDPSNNLLSVTISEPLNLERQEIALTVREFQIFQYLMQNPERIISG 181 Q + T G + L + + E QE L EF+ + +NP ++ + Sbjct: 122 MPHQEKENTFGREFYRFNGWKLDLNSHSLITPEGQEFKLPRSEFRAMLHFCENPGKLQTR 181 Query: 182 SKIRQQLWDLDEEPMSNVVAAQMRLIRRKLAQQ-NCPCPIKTVPGQGYRF 230 ++ +++ + +P V +R IR+ N P I T+ G+GYRF Sbjct: 182 EELLKKMTGRELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGYRF 231 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 87.4 bits (215), Expect = 4e-20 Identities = 68/239 (28%), Positives = 116/239 (48%), Gaps = 30/239 (12%) Query: 2 RILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSG 61 ++LLV+D+ +L + +L E + V+ +G +A L Y L ++D ++P L+G Sbjct: 3 KLLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKLNES---YKLVLLDVMMPKLNG 59 Query: 62 LELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAEXXXXXXXXXXXS 121 +E +++R N +PV+MLTA GE +RV GL+ GADD L KPF E Sbjct: 60 IETLKEIRKVSN-VPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIA--------- 109 Query: 122 PQFQPQILTLGNFSLDPSNNLLSVTISE-----------PLNLERQEIALTVREFQIFQY 170 +I + S PSNN+ +V I + + LT EF+I Sbjct: 110 -----RIKAILRRSASPSNNISNVEILSFDGITLHFSHGIATYNEENLNLTDYEFKILCL 164 Query: 171 LMQNPERIISGSKIRQQLWDLDEEPMSNVVAAQMRLIRRKL-AQQNCPCPIKTVPGQGY 228 L+++ ++S ++ ++ + P + + +RRKL ++N P KT+ G+GY Sbjct: 165 LLKSKGNVVSREELSLEVMEKPLTPFDRSLDMHISNLRRKLPKRKNKPSWFKTLRGKGY 223 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 80.1 bits (196), Expect = 6e-18 Identities = 69/236 (29%), Positives = 109/236 (46%), Gaps = 22/236 (9%) Query: 5 LVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSGLEL 64 +V+DE + ++ L Y V DG +A ++ L ++D ++P L G + Sbjct: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHE--SDPDLVVLDVMMPKLDGYGV 58 Query: 65 CQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAE-XXXXXXXXXXXSPQ 123 CQ+LR + + +P++MLTALG+ +R+ GL+ GADDY+ KPF E Sbjct: 59 CQELRKESD-IPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKN 117 Query: 124 FQPQILTLGNFSLDPSNNLLSV-TISEPLNLER-----QEIALTVREFQIFQYLMQNPER 177 P I PS+ +L + TI N + + I LT EF + + L+ Sbjct: 118 GMPGI---------PSSGVLQIATIRIDTNKRQVYKGDERIRLTGMEFSLLELLVSRSGE 168 Query: 178 IISGSKIRQQLWDLDEEPM--SNVVAAQMRLIRRKLAQQ-NCPCPIKTVPGQGYRF 230 S S+I Q++W E + VV + +R KL + + P I T G GY F Sbjct: 169 PFSRSEILQEVWGYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGYLF 224 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 67.0 bits (162), Expect = 5e-14 Identities = 39/106 (36%), Positives = 61/106 (57%), Gaps = 5/106 (4%) Query: 3 ILLVEDETDLGMAIKKVLV-SEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSG 61 +LLV+DE + +++ L S + VD + ++AWDYL++ L I D ++P + G Sbjct: 58 LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLP--ALVISDIMMPQVDG 115 Query: 62 LELCQKLRTQGN--SLPVLMLTALGEPENRVEGLDAGADDYLTKPF 105 + QKLR SLPV+ LTA G +R++G G D +L+KPF Sbjct: 116 YQFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPF 161 >SYNE-PCC-01-000877 sll1330 Length = 250 Score = 66.6 bits (161), Expect = 7e-14 Identities = 66/235 (28%), Positives = 101/235 (42%), Gaps = 18/235 (7%) Query: 3 ILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSGL 62 I +VE L + L Y+V + QA NQ TLA++D L G+ Sbjct: 6 ISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQLP--TLAVIDSDLTDGDGI 63 Query: 63 ELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAEXXXXXX-XXXXXS 121 ELC+ L Q S+ + +L+A ++ V GL AGADDYLTKPF M E Sbjct: 64 ELCRWLYQQHQSM-IFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRRVR 122 Query: 122 PQFQPQILTLGNFSLDPSNNLLSVTISEPLNLERQEIALTVREFQIFQYLMQNPERIISG 181 P +L G +D + + + + LT +EF + L Q +S Sbjct: 123 TVAAPLLLDYGVLKID--------LVQRRVEYQGNFVDLTPQEFSLLYVLTQAEGSALSR 174 Query: 182 SKIRQQLWDLDEEPMSN--VVAAQMRLIRRKL-AQQNCPCPIKTVPGQGYRFTLS 233 +++ ++ W E + N + + +R+K+ P I+TV GYRF S Sbjct: 175 TELLRRAW---PEAIDNPRTIDTHVLSLRKKIETDPRQPSLIQTVRNVGYRFNSS 226 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 64.3 bits (155), Expect = 3e-13 Identities = 36/105 (34%), Positives = 60/105 (57%), Gaps = 4/105 (3%) Query: 3 ILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSGL 62 IL+V+D + I ++L E Y +VT G +A + + L ++D ++PG+ GL Sbjct: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQPD--LILLDLMMPGMDGL 77 Query: 63 ELCQKLRT--QGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPF 105 E+C +L+ Q +PV+ LTA E ++ ++ GA DY+TKPF Sbjct: 78 EVCDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPF 122 Score = 41.2 bits (95), Expect = 3e-06 Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 5/107 (4%) Query: 1 MRILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLS 60 + ILL ED K +L Y VD V +G +A L +Y + ++D +P + Sbjct: 740 LTILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKG--DYDVVLMDVEMPEMD 797 Query: 61 GLELCQKLR-TQGNSLP--VLMLTALGEPENRVEGLDAGADDYLTKP 104 GL + +R +QG S ++ +TA +R L +G +DY++KP Sbjct: 798 GLTATEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKP 844 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 62.4 bits (150), Expect = 1e-12 Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 5/108 (4%) Query: 2 RILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTE---YTLAIVDWLLPG 58 R+L+V+D + +K +L K+VV+ V G +A ++L E +++ +DW +P Sbjct: 772 RVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPN 831 Query: 59 LSGLELCQKLRTQG-NSLP-VLMLTALGEPENRVEGLDAGADDYLTKP 104 + GLE+ ++L+ G N P + ++TA G E V+ G DD L KP Sbjct: 832 MDGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKP 879 Score = 43.1 bits (100), Expect = 8e-07 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 4/105 (3%) Query: 2 RILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSG 61 RILLVED ++L + VD +G A + L N Y L ++D +P + G Sbjct: 926 RILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNN--AYALVLMDMQMPEMDG 983 Query: 62 LELCQKLRTQGN--SLPVLMLTALGEPENRVEGLDAGADDYLTKP 104 +E +R LP++ +TA +R L AG +D+L KP Sbjct: 984 IEATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKP 1028 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 61.2 bits (147), Expect = 3e-12 Identities = 35/105 (33%), Positives = 60/105 (57%), Gaps = 4/105 (3%) Query: 3 ILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSGL 62 +LLV+D+ +L + +K L + Y V +G +A D L T + + D ++P + G Sbjct: 10 LLLVDDDPNLLLLVKDYLEYQGYQVTTAGNGREALDLLTT--TVPDMIVCDIMMPEMDGY 67 Query: 63 ELCQKLRTQGNS--LPVLMLTALGEPENRVEGLDAGADDYLTKPF 105 +++R + +PV+ L+A G+ NRV+GL+ GAD Y+ KPF Sbjct: 68 AFIEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPF 112 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 59.3 bits (142), Expect = 1e-11 Identities = 33/105 (31%), Positives = 62/105 (59%), Gaps = 4/105 (3%) Query: 3 ILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSGL 62 +LLVED + I +L + V DG +A + L+N + L ++D ++P ++G Sbjct: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPD--LVVLDIVMPRMNGY 87 Query: 63 ELCQKLRT--QGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPF 105 E+C+++++ + ++PV+M ++ GE +R G+ GAD Y+ KPF Sbjct: 88 EVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPF 132 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 56.2 bits (134), Expect = 9e-11 Identities = 31/109 (28%), Positives = 62/109 (56%), Gaps = 4/109 (3%) Query: 3 ILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSGL 62 ILLV+D + + +L++ Y V VT G A L+ + + L ++D +P + G Sbjct: 11 ILLVDDLPNNLQLLSDLLINLGYTVRSVTSGKMALRTLQVKRPD--LILLDIKMPDMDGY 68 Query: 63 ELCQKLRTQGN--SLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAE 109 ++C+ ++ + +P++ ++ALG+ ++V+ + G DY+TKPF + E Sbjct: 69 QVCEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQIEE 117 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 55.8 bits (133), Expect = 1e-10 Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 2/105 (1%) Query: 3 ILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSGL 62 IL+VEDE + I + L E Y + +G+ A L + L I D ++P + G Sbjct: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 Query: 63 ELCQKLRTQGNS--LPVLMLTALGEPENRVEGLDAGADDYLTKPF 105 L L+ + +P + LTALG ++ +G+++GADDYL KPF Sbjct: 64 GLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPF 108 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 55.5 bits (132), Expect = 2e-10 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 13/141 (9%) Query: 1 MRILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLS 60 ++ILL ED ++L + Y V +G + D LE ++ Y L ++D +P + Sbjct: 1190 LQILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKF--YDLVLMDMQMPVMD 1247 Query: 61 GLELCQKLRTQGNSLP------VLMLTALGEPENRVEGLDAGADDYLTKPFVMAE--XXX 112 G+ C+ +R +LP ++ +TA P +R E LDAG D Y++KP + + Sbjct: 1248 GITACRHIR---QTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQLRKVL 1304 Query: 113 XXXXXXXXSPQFQPQILTLGN 133 SPQ + I+TLG+ Sbjct: 1305 QDTSALITSPQAREDIVTLGD 1325 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 51.6 bits (122), Expect = 2e-09 Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 4/106 (3%) Query: 2 RILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSG 61 ++L+V+D + + ++++L S +VV +G A E+ W + ++D +P L G Sbjct: 419 KVLVVDDRPESRLLLRQLLTSLGFVVQEAENGEMAIALWES-WHPQVI-LMDMQMPVLDG 476 Query: 62 LELCQKLRT--QGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPF 105 QK++ QG ++ LTA R E L AG DD+L+KPF Sbjct: 477 RSTTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPF 522 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 48.9 bits (115), Expect = 1e-08 Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 4/105 (3%) Query: 2 RILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSG 61 +IL+V+D+ + M ++ L E + V+ T+G +A E L +D ++P + G Sbjct: 13 KILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVL--LDAVMPVMDG 70 Query: 62 LELCQKLRT--QGNSLPVLMLTALGEPENRVEGLDAGADDYLTKP 104 CQ L Q S VLM+T L + + +AGA DY+TKP Sbjct: 71 FACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKP 115 >SYNE-PCC-01-001075 sll1592 Length = 226 Score = 46.6 bits (109), Expect = 7e-08 Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 4/105 (3%) Query: 1 MRILLVEDETDLGMAIKKVLVSEKY--VVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPG 58 +RILLVED+ + + L E V DG A Y+ Q + + I+D LPG Sbjct: 8 IRILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQL--FDVVILDVGLPG 65 Query: 59 LSGLELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTK 103 + G+E C +++ LPVL+LT+ +P ++A A Y K Sbjct: 66 IGGIEACHQIKKIHPQLPVLILTSHSQPALINRLIEAQAQGYCVK 110 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 45.8 bits (107), Expect = 1e-07 Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 4/106 (3%) Query: 2 RILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSG 61 +IL+V+D++ + K+L + ++ ++G +A E+ W + L +D +P + G Sbjct: 631 KILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWES-WEPH-LIFMDMRMPVMDG 688 Query: 62 LELCQKLRTQ--GNSLPVLMLTALGEPENRVEGLDAGADDYLTKPF 105 E + ++ Q GN+ V+ LTA E + L AG DD+L KPF Sbjct: 689 YEATKYIKGQVKGNATAVVALTASVLEEEKAIVLSAGCDDFLRKPF 734 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 44.7 bits (104), Expect = 3e-07 Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 4/104 (3%) Query: 3 ILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSGL 62 ILLVED +L S+ V +G +A L + Y ++D +P L+G Sbjct: 720 ILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSN--TYDAILMDIQMPMLNGY 777 Query: 63 ELCQKLRTQG--NSLPVLMLTALGEPENRVEGLDAGADDYLTKP 104 + + +R Q +LP++ +TA ++ + LDAG +D+LTKP Sbjct: 778 DATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKP 821 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 44.7 bits (104), Expect = 3e-07 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 4/105 (3%) Query: 2 RILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSG 61 ++LLVED + + L+ + Y V DG QA ++ + L ++D LP + G Sbjct: 6 KVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQ--LILMDMSLPIIDG 63 Query: 62 LELCQKLR--TQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKP 104 ++++ G +P++ LTA +R + AG DDY TKP Sbjct: 64 WTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKP 108 >SYNE-PCC-01-001160 sll1708 Length = 226 Score = 43.1 bits (100), Expect = 8e-07 Identities = 33/140 (23%), Positives = 65/140 (46%), Gaps = 4/140 (2%) Query: 1 MRILLVEDETDLGMAIKKVL-VSEKY-VVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPG 58 M+IL+VED+ + + +++ L E++ ++ V +G A + L ++D LPG Sbjct: 17 MKILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQ--QAAVLNPDLIVMDIGLPG 74 Query: 59 LSGLELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAEXXXXXXXXX 118 L G+E ++++ + +++LT+ P + L +GAD Y K + Sbjct: 75 LDGIEATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIAAAQ 134 Query: 119 XXSPQFQPQILTLGNFSLDP 138 + PQI + +L P Sbjct: 135 DGATYLDPQIARVVVENLKP 154 >HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator protein (narP) Length = 208 Score = 42.0 bits (97), Expect = 2e-06 Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 4/105 (3%) Query: 1 MRILLVEDETDLGMAIKKVLVSEKY--VVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPG 58 +++LL++D + IK+++ + VV V+ G++ T + I+D + G Sbjct: 5 LKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQ--TSPDVIILDLNMKG 62 Query: 59 LSGLELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTK 103 LSGL+ + LR +G +L+LT + +DAGAD YL K Sbjct: 63 LSGLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLK 107 >SYNE-PCC-01-002221 slr1213 Length = 241 Score = 41.2 bits (95), Expect = 3e-06 Identities = 36/160 (22%), Positives = 77/160 (48%), Gaps = 10/160 (6%) Query: 2 RILLVEDETDLGMAIKKVLVSEKYVVDWV-TDGSQAWDYLENQWTEYTLAIVDWLLPG-L 59 +IL+VEDE + I ++L S+ Y + + +DG+ A + + + L ++D + G + Sbjct: 4 KILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPD--LVLLDIRIKGEI 61 Query: 60 SGLELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAE-XXXXXXXXX 118 G+E+ +++++ S+P++ LTA + E Y+ KPF + Sbjct: 62 DGIEVAERIKSL-YSIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTVAIAIA 120 Query: 119 XXSPQFQPQILTL----GNFSLDPSNNLLSVTISEPLNLE 154 Q +P+ TL G++ L P+ + + + + + +E Sbjct: 121 NHQQQRKPEEDTLSTSTGHYRLQPTLDYIEEHLDQGITVE 160 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.318 0.136 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,896 Number of Sequences: 78 Number of extensions: 921 Number of successful extensions: 75 Number of sequences better than 1.0e-05: 31 Number of HSP's better than 0.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 17 Number of HSP's that attempted gapping in prelim test: 18 Number of HSP's gapped (non-prelim): 34 length of query: 234 length of database: 48,235 effective HSP length: 60 effective length of query: 174 effective length of database: 43,555 effective search space: 7578570 effective search space used: 7578570 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 91 (39.7 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-000542 sll0821 (1276 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-000542 sll0821 2479 0.0 SYNE-PCC-01-002489 slr1588 193 3e-51 SYNE-PCC-01-002618 slr1760 177 2e-46 SYNE-PCC-01-001133 sll1673 162 6e-42 SYNE-PCC-01-002220 slr1212 143 3e-36 SYNE-PCC-01-000983 sll1473 135 8e-34 SYNE-PCC-01-002778 slr1969 99 8e-23 SYNE-PCC-01-001690 slr0473 87 3e-19 SYNE-PCC-01-002617 slr1759 55 1e-09 >SYNE-PCC-01-000542 sll0821 Length = 1276 Score = 2479 bits (6425), Expect = 0.0 Identities = 1242/1276 (97%), Positives = 1242/1276 (97%) Query: 1 MNPNRSLEDFLRNVINKFHRALTLRETLQVIVEEARIFLGVDRVKIYKFASDGSGEVLAE 60 MNPNRSLEDFLRNVINKFHRALTLRETLQVIVEEARIFLGVDRVKIYKFASDGSGEVLAE Sbjct: 1 MNPNRSLEDFLRNVINKFHRALTLRETLQVIVEEARIFLGVDRVKIYKFASDGSGEVLAE 60 Query: 61 AVNRAALPSLLGLHFPVEDIPPQAREELGNQRKMIAVDVAHRRKKSHELSGRISPTEHSN 120 AVNRAALPSLLGLHFPVEDIPPQAREELGNQRKMIAVDVAHRRKKSHELSGRISPTEHSN Sbjct: 61 AVNRAALPSLLGLHFPVEDIPPQAREELGNQRKMIAVDVAHRRKKSHELSGRISPTEHSN 120 Query: 121 GHYTTVDSCHIQYLLAMGVLSSLTVPVMQDQQLWGIMAVHHSKPRRFTEQEWETMALLSK 180 GHYTTVDSCHIQYLLAMGVLSSLTVPVMQDQQLWGIMAVHHSKPRRFTEQEWETMALLSK Sbjct: 121 GHYTTVDSCHIQYLLAMGVLSSLTVPVMQDQQLWGIMAVHHSKPRRFTEQEWETMALLSK 180 Query: 181 EVSLAITXXXXXXXXXXXXXXXXXXXXXXTTVAQYGDRPETWQYALETVGQAVEADGAVL 240 EVSLAIT TTVAQYGDRPETWQYALETVGQAVEADGAVL Sbjct: 181 EVSLAITQSQLSRQVHQQQVQEALVQRLETTVAQYGDRPETWQYALETVGQAVEADGAVL 240 Query: 241 YIAPDLTGSVAQHYQWNLRFDWGNWLETSLWQELMRGQPSAAMEPMAAVQSTWEKPRPFT 300 YIAPDLTGSVAQHYQWNLRFDWGNWLETSLWQELMRGQPSAAMEPMAAVQSTWEKPRPFT Sbjct: 241 YIAPDLTGSVAQHYQWNLRFDWGNWLETSLWQELMRGQPSAAMEPMAAVQSTWEKPRPFT 300 Query: 301 SVAPLPPTNCVPHGYTLGELEQRSDWIAPPESLSAENFQSFLIVPLAADQQWVGSLILLR 360 SVAPLPPTNCVPHGYTLGELEQRSDWIAPPESLSAENFQSFLIVPLAADQQWVGSLILLR Sbjct: 301 SVAPLPPTNCVPHGYTLGELEQRSDWIAPPESLSAENFQSFLIVPLAADQQWVGSLILLR 360 Query: 361 KEKSLVKHWAGKRGIDRRNILPRLSFEAWEETQKLVPTWNRSERKLAQVASTQLYMAITQ 420 KEKSLVKHWAGKRGIDRRNILPRLSFEAWEETQKLVPTWNRSERKLAQVASTQLYMAITQ Sbjct: 361 KEKSLVKHWAGKRGIDRRNILPRLSFEAWEETQKLVPTWNRSERKLAQVASTQLYMAITQ 420 Query: 421 QFVTRLITQQTAYDPLTQLPNWIIFNRQLTLALLDALYEGKMVGVLVIAMDRFKRINESF 480 QFVTRLITQQTAYDPLTQLPNWIIFNRQLTLALLDALYEGKMVGVLVIAMDRFKRINESF Sbjct: 421 QFVTRLITQQTAYDPLTQLPNWIIFNRQLTLALLDALYEGKMVGVLVIAMDRFKRINESF 480 Query: 481 GHKTGDGLLQEVADRLNQKXXXXXXXXXXXXRWHGDGFTILLTQISDNQEMIPLCERLLS 540 GHKTGDGLLQEVADRLNQK RWHGDGFTILLTQISDNQEMIPLCERLLS Sbjct: 481 GHKTGDGLLQEVADRLNQKLSPLAAYSPLLSRWHGDGFTILLTQISDNQEMIPLCERLLS 540 Query: 541 TFQEPFFLQGQPIYLTASMGISTAPYDGETAESLLKFAEIALTRAKCQGKNTYQFYRPQD 600 TFQEPFFLQGQPIYLTASMGISTAPYDGETAESLLKFAEIALTRAKCQGKNTYQFYRPQD Sbjct: 541 TFQEPFFLQGQPIYLTASMGISTAPYDGETAESLLKFAEIALTRAKCQGKNTYQFYRPQD 600 Query: 601 SAPMLDRLTLESDLRQALTNQEFVLYFQPQVALDTGKLLGVEALVRWQHPRLGQVAPDVF 660 SAPMLDRLTLESDLRQALTNQEFVLYFQPQVALDTGKLLGVEALVRWQHPRLGQVAPDVF Sbjct: 601 SAPMLDRLTLESDLRQALTNQEFVLYFQPQVALDTGKLLGVEALVRWQHPRLGQVAPDVF 660 Query: 661 IPLAEELGLINHLGQWVLETACATHQHFFRETGRRLRMAVNISARQFQDEKWLNSVLECL 720 IPLAEELGLINHLGQWVLETACATHQHFFRETGRRLRMAVNISARQFQDEKWLNSVLECL Sbjct: 661 IPLAEELGLINHLGQWVLETACATHQHFFRETGRRLRMAVNISARQFQDEKWLNSVLECL 720 Query: 721 KRTGMPPEDLELEITESLMMEDIKGTVVLLHRLREEGVQVAIDDFGTGYSSLSILKQLPI 780 KRTGMPPEDLELEITESLMMEDIKGTVVLLHRLREEGVQVAIDDFGTGYSSLSILKQLPI Sbjct: 721 KRTGMPPEDLELEITESLMMEDIKGTVVLLHRLREEGVQVAIDDFGTGYSSLSILKQLPI 780 Query: 781 HRLKIDKSFVNDLLNEGADTAIIQYVIDLANGLNLETVAEGIESEAQLQRLQKMGCHLGQ 840 HRLKIDKSFVNDLLNEGADTAIIQYVIDLANGLNLETVAEGIESEAQLQRLQKMGCHLGQ Sbjct: 781 HRLKIDKSFVNDLLNEGADTAIIQYVIDLANGLNLETVAEGIESEAQLQRLQKMGCHLGQ 840 Query: 841 GYFLTRPLPAEAMMTYLYYPQILDFGPTPPLPKVALPETETEAGQGNVGDRPLPNSLNRE 900 GYFLTRPLPAEAMMTYLYYPQILDFGPTPPLPKVALPETETEAGQGNVGDRPLPNSLNRE Sbjct: 841 GYFLTRPLPAEAMMTYLYYPQILDFGPTPPLPKVALPETETEAGQGNVGDRPLPNSLNRE 900 Query: 901 NPWTEKLHDYVLLKERLQQRNVKEKLVLKIANKIRASLNINDILYSTVTEVRQFLNTDRV 960 NPWTEKLHDYVLLKERLQQRNVKEKLVLKIANKIRASLNINDILYSTVTEVRQFLNTDRV Sbjct: 901 NPWTEKLHDYVLLKERLQQRNVKEKLVLKIANKIRASLNINDILYSTVTEVRQFLNTDRV 960 Query: 961 VLFKFNSQWSGQVVTESHNDFCRSIINDEIDDPCFKGHYLRLYREGRVRAVSDIEKADLA 1020 VLFKFNSQWSGQVVTESHNDFCRSIINDEIDDPCFKGHYLRLYREGRVRAVSDIEKADLA Sbjct: 961 VLFKFNSQWSGQVVTESHNDFCRSIINDEIDDPCFKGHYLRLYREGRVRAVSDIEKADLA 1020 Query: 1021 DCHKELLRHYQVKANLVVPVVFNENLWGLLIAHECKTPRYWQEEDLQLLMELATQVAIAI 1080 DCHKELLRHYQVKANLVVPVVFNENLWGLLIAHECKTPRYWQEEDLQLLMELATQVAIAI Sbjct: 1021 DCHKELLRHYQVKANLVVPVVFNENLWGLLIAHECKTPRYWQEEDLQLLMELATQVAIAI 1080 Query: 1081 HQGELYEQLETANIRLQQISSLDALTQVGNRYLFDSTLEREWQRLQRIREPLALLLCDVD 1140 HQGELYEQLETANIRLQQISSLDALTQVGNRYLFDSTLEREWQRLQRIREPLALLLCDVD Sbjct: 1081 HQGELYEQLETANIRLQQISSLDALTQVGNRYLFDSTLEREWQRLQRIREPLALLLCDVD 1140 Query: 1141 FFKGFNDNYGHPAGDRCLKKIADAMAKVAKRPTDLVARYGGEEFAIILSETSLEGAINVT 1200 FFKGFNDNYGHPAGDRCLKKIADAMAKVAKRPTDLVARYGGEEFAIILSETSLEGAINVT Sbjct: 1141 FFKGFNDNYGHPAGDRCLKKIADAMAKVAKRPTDLVARYGGEEFAIILSETSLEGAINVT 1200 Query: 1201 EALQVEVANLAIPHTVSGTGHVTLSIGIAVYTPERHINPNALVKAADLALYEAKAKGRNQ 1260 EALQVEVANLAIPHTVSGTGHVTLSIGIAVYTPERHINPNALVKAADLALYEAKAKGRNQ Sbjct: 1201 EALQVEVANLAIPHTVSGTGHVTLSIGIAVYTPERHINPNALVKAADLALYEAKAKGRNQ 1260 Query: 1261 WLAYEGSQLPHVDGEV 1276 WLAYEGSQLPHVDGEV Sbjct: 1261 WLAYEGSQLPHVDGEV 1276 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 193 bits (490), Expect = 3e-51 Identities = 104/249 (41%), Positives = 153/249 (61%), Gaps = 10/249 (4%) Query: 606 DRLTLESDLRQALTNQEFVLYFQPQVALDTGKLLGVEALVRWQHPRLGQVAPDVFIPLAE 665 D + DL L + L++QP+V++ L G EAL+RW HPR G V+P +FIP+AE Sbjct: 157 DEAEIWRDLEVGLNTGQVFLFYQPKVSIHNHCLAGCEALIRWHHPRKGFVSPGLFIPIAE 216 Query: 666 ELGLINHLGQWVLETACATHQHFFRETGRRLRMAVNISARQFQDEKWLNSVLECLKRTG- 724 + G I+ +G+WV+ET Q + + +++A+NISARQF E L C+ R G Sbjct: 217 KTGFISVVGEWVIETVLRQCQQWQYQGLDPIQVAINISARQFHGED-----LICILRLGT 271 Query: 725 ----MPPEDLELEITESLMMEDIKGTVVLLHRLREEGVQVAIDDFGTGYSSLSILKQLPI 780 + P+ LE+E+TE+L++++++ ++ L+ LR EG VAIDDFGTGYSSLS L+Q P Sbjct: 272 HKYDVSPQQLEVELTETLLVKNVQDSIKQLNELRAEGFSVAIDDFGTGYSSLSYLQQFPF 331 Query: 781 HRLKIDKSFVNDLLNEGADTAIIQYVIDLANGLNLETVAEGIESEAQLQRLQKMGCHLGQ 840 LKID+SFV + + I +I+LA+ L L AEG+E+ A+ + MGC Q Sbjct: 332 DVLKIDQSFVRHIDKNAKNKTITASIINLAHELELRVTAEGVETWAEYDTIAHMGCDELQ 391 Query: 841 GYFLTRPLP 849 GY +RPLP Sbjct: 392 GYLFSRPLP 400 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 177 bits (448), Expect = 2e-46 Identities = 90/190 (47%), Positives = 123/190 (64%), Gaps = 1/190 (0%) Query: 1072 LATQVAIAIHQGELYEQLETANIRLQQISSLDALTQVGNRYLFDSTLEREWQRLQRIREP 1131 L +V ++Q L QLE+ N L++++ +D LTQ+ NR + L+ EW R + P Sbjct: 121 LRQRVKRLLYQNRLQHQLESVNQMLERLAKVDQLTQLANRRQLELFLDTEWSEAIREQYP 180 Query: 1132 LALLLCDVDFFKGFNDNYGHPAGDRCLKKIADAMAKVAKRPTDLVARYGGEEFAIILSET 1191 ++LLCD+D+FK +ND+YGH GD CL+++A A+ +V RP DL ARYGGEEF I+L T Sbjct: 181 FSILLCDIDYFKNYNDHYGHQGGDDCLQQVAKALTRVVHRPKDLAARYGGEEFLIVLPNT 240 Query: 1192 SLEGAINVTEALQVEVANLAIPHTVSG-TGHVTLSIGIAVYTPERHINPNALVKAADLAL 1250 L+GAI++ E +Q E+ LAIPH S HVTLSIG A P + LV AAD L Sbjct: 241 DLQGAIHIGEDIQAEITRLAIPHVQSAIADHVTLSIGCASTIPRLGSDWGKLVGAADQYL 300 Query: 1251 YEAKAKGRNQ 1260 YEAKA+GRN+ Sbjct: 301 YEAKAQGRNR 310 Score = 53.1 bits (126), Expect = 5e-09 Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 16/177 (9%) Query: 423 VTRLITQQTAYDPLTQLPNWIIFNRQLTLAL----LDALYEGKMVGVLVIAMDRFKRINE 478 V +++ + D LTQL N RQL L L +A+ E +L+ +D FK N+ Sbjct: 141 VNQMLERLAKVDQLTQLAN----RRQLELFLDTEWSEAIREQYPFSILLCDIDYFKNYND 196 Query: 479 SFGHKTGDGLLQEVADRLNQKXXXXXXXXXXXXRWHGDGFTILLTQISDNQEMIPLCERL 538 +GH+ GD LQ+VA L + R+ G+ F I+L +D Q I + E + Sbjct: 197 HYGHQGGDDCLQQVAKALTR---VVHRPKDLAARYGGEEFLIVLPN-TDLQGAIHIGEDI 252 Query: 539 ---LSTFQEPFFLQGQPIYLTASMG-ISTAPYDGETAESLLKFAEIALTRAKCQGKN 591 ++ P ++T S+G ST P G L+ A+ L AK QG+N Sbjct: 253 QAEITRLAIPHVQSAIADHVTLSIGCASTIPRLGSDWGKLVGAADQYLYEAKAQGRN 309 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 162 bits (410), Expect = 6e-42 Identities = 81/177 (45%), Positives = 119/177 (67%), Gaps = 1/177 (0%) Query: 1088 QLETANIRLQQISSLDALTQVGNRYLFDSTLEREWQRLQRIREPLALLLCDVDFFKGFND 1147 +L+ AN +LQ ++++D LT + NR FD L +EWQR R ++PL+L+L D+D+FK +ND Sbjct: 276 ELQAANQQLQLLANIDGLTHIANRRRFDEYLAQEWQRHCREQKPLSLILVDIDYFKAYND 335 Query: 1148 NYGHPAGDRCLKKIADAMAKVAKRPTDLVARYGGEEFAIILSETSLEGAINVTEALQVEV 1207 YGH GD CL+K+A+ + +AKR TDLVARYGGEEF I+L T+ + A+ + E + + Sbjct: 336 LYGHQKGDDCLQKVANTLVDIAKRITDLVARYGGEEFVIVLPNTNRQDALAMAENMLQAI 395 Query: 1208 ANLAIPHTVSGTG-HVTLSIGIAVYTPERHINPNALVKAADLALYEAKAKGRNQWLA 1263 A LAIPH S +VT+SIG++ P ++ AD ALY AK++GRN+ +A Sbjct: 396 AALAIPHEGSSVSKYVTISIGVSSIIPMPEDTIERIISEADQALYSAKSQGRNRAIA 452 Score = 60.1 bits (144), Expect = 4e-11 Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 8/162 (4%) Query: 434 DPLTQLPNWIIFNRQLTLALLDALYEGKMVGVLVIAMDRFKRINESFGHKTGDGLLQEVA 493 D LT + N F+ L E K + ++++ +D FK N+ +GH+ GD LQ+VA Sbjct: 291 DGLTHIANRRRFDEYLAQEWQRHCREQKPLSLILVDIDYFKAYNDLYGHQKGDDCLQKVA 350 Query: 494 DRLNQKXXXXXXXXXXXXRWHGDGFTILLTQISDNQEMIPLCERLLSTFQE---PFFLQG 550 + L R+ G+ F I+L ++ Q+ + + E +L P Sbjct: 351 NTL---VDIAKRITDLVARYGGEEFVIVLPN-TNRQDALAMAENMLQAIAALAIPHEGSS 406 Query: 551 QPIYLTASMGIST-APYDGETAESLLKFAEIALTRAKCQGKN 591 Y+T S+G+S+ P +T E ++ A+ AL AK QG+N Sbjct: 407 VSKYVTISIGVSSIIPMPEDTIERIISEADQALYSAKSQGRN 448 >SYNE-PCC-01-002220 slr1212 Length = 844 Score = 143 bits (361), Expect = 3e-36 Identities = 71/180 (39%), Positives = 115/180 (63%), Gaps = 3/180 (1%) Query: 914 KERLQQRNVKEKLVLKIANKIRASLNINDILYSTVTEVRQFLNTDRVVLFKFN--SQWS- 970 ++RL ++ +E L+ +I +IR SL++ I + V E+RQFL DRVV+F+F+ S +S Sbjct: 450 EQRLYEQGRRESLLREITQRIRQSLDLPTIFNTVVQEIRQFLEADRVVIFQFSPDSDFSV 509 Query: 971 GQVVTESHNDFCRSIINDEIDDPCFKGHYLRLYREGRVRAVSDIEKADLADCHKELLRHY 1030 G +V ES + IIN I++ CF +Y + Y++GR++ + DI ++ L CH + L Sbjct: 510 GNIVAESVLAPFKPIINSAIEETCFSNNYAQRYQQGRIQVIEDIHQSHLRQCHIDFLARL 569 Query: 1031 QVKANLVVPVVFNENLWGLLIAHECKTPRYWQEEDLQLLMELATQVAIAIHQGELYEQLE 1090 QV+ANLV+P++ + LWGLL H+C + R W++ ++ LL ++ Q IAI Q LYEQ + Sbjct: 570 QVRANLVLPLINDAILWGLLCIHQCDSSRVWEQTEIDLLKQITNQFEIAIQQATLYEQAQ 629 Score = 63.2 bits (152), Expect = 5e-12 Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 27/183 (14%) Query: 8 EDFLRNVINKFHRALTLRETLQVIVEEARIFLGVDRVKIYKFASDGS---GEVLAEAVNR 64 E LR + + ++L L +V+E R FL DRV I++F+ D G ++AE+V Sbjct: 460 ESLLREITQRIRQSLDLPTIFNTVVQEIRQFLEADRVVIFQFSPDSDFSVGNIVAESVLA 519 Query: 65 AALPSLLGLHFPVEDIPPQAREELGNQRKMIAVDVAHRRKKSHELSGRISPTEHSNGHYT 124 P + I A EE + + A R ++ GRI E H + Sbjct: 520 -----------PFKPIINSAIEET-----CFSNNYAQRYQQ-----GRIQVIEDI--HQS 556 Query: 125 TVDSCHIQYLLAMGVLSSLTVPVMQDQQLWGIMAVHHSKPRRFTEQ-EWETMALLSKEVS 183 + CHI +L + V ++L +P++ D LWG++ +H R EQ E + + ++ + Sbjct: 557 HLRQCHIDFLARLQVRANLVLPLINDAILWGLLCIHQCDSSRVWEQTEIDLLKQITNQFE 616 Query: 184 LAI 186 +AI Sbjct: 617 IAI 619 >SYNE-PCC-01-000983 sll1473 Length = 481 Score = 135 bits (340), Expect = 8e-34 Identities = 72/207 (34%), Positives = 118/207 (57%), Gaps = 12/207 (5%) Query: 903 WTEKLHDYVLLKERLQQRNVKEKLVLKIANKIRASLNINDILYSTVTEVRQFLNTDRVVL 962 W + + ++ ++Q+ +E+ + +I IR SLN+ +L +TV EV+ L DRV++ Sbjct: 22 WHRQNQERRRIEISIKQQTQRERFINQITQHIRQSLNLETVLNTTVAEVKTLLQVDRVLI 81 Query: 963 FKFNSQWSGQVVTESHNDFCRSIINDEIDDPCFKGHYLRLYREGRVRAVSDIEKADLADC 1022 ++ +G +TES N SI+ D F Y + Y +G+VRA++DI++ D+ C Sbjct: 82 YRIWQDGTGSAITESVNANYPSILGRTFSDEVFPVEYHQAYTKGKVRAINDIDQDDIEIC 141 Query: 1023 HKELLRHYQVKANLVVPVVFNEN------------LWGLLIAHECKTPRYWQEEDLQLLM 1070 + ++ + VK+ LVVP++ + LWGLLI H+C R WQ +++L+ Sbjct: 142 LADFVKQFGVKSKLVVPILQHNRASSLDNESEFPYLWGLLITHQCAFTRPWQPWEVELMK 201 Query: 1071 ELATQVAIAIHQGELYEQLETANIRLQ 1097 +LA QVAIAI Q ELYEQL+ N L+ Sbjct: 202 QLANQVAIAIQQSELYEQLQQLNKDLE 228 Score = 61.6 bits (148), Expect = 1e-11 Identities = 49/192 (25%), Positives = 78/192 (40%), Gaps = 36/192 (18%) Query: 8 EDFLRNVINKFHRALTLRETLQVIVEEARIFLGVDRVKIYKFASDGSGEVLAEAVNRAAL 67 E F+ + ++L L L V E + L VDRV IY+ DG+G + E+VN A Sbjct: 43 ERFINQITQHIRQSLNLETVLNTTVAEVKTLLQVDRVLIYRIWQDGTGSAITESVN-ANY 101 Query: 68 PSLLGLHFPVEDIPPQAREELGNQRKMIAVDVAHRRKKSHELSGRISPTEHSNGHYTTVD 127 PS+LG F E P + + + D+ ++ Sbjct: 102 PSILGRTFSDEVFPVEYHQAYTKGKVRAINDI----------------------DQDDIE 139 Query: 128 SCHIQYLLAMGVLSSLTVPVMQDQQ------------LWGIMAVHH-SKPRRFTEQEWET 174 C ++ GV S L VP++Q + LWG++ H + R + E E Sbjct: 140 ICLADFVKQFGVKSKLVVPILQHNRASSLDNESEFPYLWGLLITHQCAFTRPWQPWEVEL 199 Query: 175 MALLSKEVSLAI 186 M L+ +V++AI Sbjct: 200 MKQLANQVAIAI 211 >SYNE-PCC-01-002778 slr1969 Length = 750 Score = 99.0 bits (245), Expect = 8e-23 Identities = 66/201 (32%), Positives = 108/201 (53%), Gaps = 25/201 (12%) Query: 913 LKERLQQRNVKEKLVLKIANKIRASLNINDILYSTVTEVRQFLNTDRVVLFKFN------ 966 L++ LQ VK L+ ++ +IR SL++++IL + VT V++FL DR+V+++F+ Sbjct: 150 LQDSLQASQVK--LLSQVIAQIRQSLDLSEILNNAVTAVQKFLFVDRLVIYQFHYSQPSL 207 Query: 967 -------------SQWSGQVVTESHND-FCRSIINDEIDDPCFKG--HYLRLYREGRVRA 1010 Q G+V E+ +++ ++ CF Y + Y +G V A Sbjct: 208 TPLEENQIPAPRPRQQYGEVTYEARRSPEIDTMLGIMTENDCFSQVFSYEQKYLKGAVVA 267 Query: 1011 VSDIEKADLAD-CHKELLRHYQVKANLVVPVVFNENLWGLLIAHECKTPRYWQEEDLQLL 1069 VSDIE + C LL+ YQV+A LV P++ LWGLLIAH+C PR W + + L Sbjct: 268 VSDIENHYSSSYCLVGLLQRYQVRAKLVAPIIVEGQLWGLLIAHQCHHPRQWLDSEKNFL 327 Query: 1070 MELATQVAIAIHQGELYEQLE 1090 ++ +A+AI Q LY +++ Sbjct: 328 GQIGEHLAVAIVQSLLYSEVQ 348 >SYNE-PCC-01-001690 slr0473 Length = 748 Score = 87.0 bits (214), Expect = 3e-19 Identities = 53/156 (33%), Positives = 82/156 (52%), Gaps = 9/156 (5%) Query: 15 INKFHRALTLRETLQVIVEEARIFLGVDRVKIYKFASDGSGEVLAEAVNRAALPSLLGLH 74 +N+ + LR+ VIVEE R G DRV +Y+F + G+V+AE R + LGLH Sbjct: 144 LNRLRQQANLRDFYDVIVEEVRRMTGFDRVMLYRFDENNHGDVIAED-KRDDMEPYLGLH 202 Query: 75 FPVEDIPPQAREELGNQRKMIAVDVAHRRKKSHELSGRISPTEHSNGHYT-----TVDSC 129 +P DIP AR + + DV + L+ ++P+ + T + C Sbjct: 203 YPESDIPQPARRLFIHNPIRVIPDVYG---VAVPLTPAVNPSTNRAVDLTESILRSAYHC 259 Query: 130 HIQYLLAMGVLSSLTVPVMQDQQLWGIMAVHHSKPR 165 H+ YL MGV +SLT+ +++D LWG++A HH P+ Sbjct: 260 HLTYLKNMGVGASLTISLIKDGHLWGLIACHHQTPK 295 Score = 52.0 bits (123), Expect = 1e-08 Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 25/152 (16%) Query: 932 NKIRASLNINDILYSTVTEVRQFLNTDRVVLFKFNSQWSGQVVTESHNDFCRSIINDEID 991 N++R N+ D V EVR+ DRV+L++F+ G V+ E D + Sbjct: 145 NRLRQQANLRDFYDVIVEEVRRMTGFDRVMLYRFDENNHGDVIAEDKRDDMEPYLGLHYP 204 Query: 992 DPCFKGHYLRLYREGRVRAVSDI----------------EKADLAD--------CHKELL 1027 + RL+ +R + D+ DL + CH L Sbjct: 205 ESDIPQPARRLFIHNPIRVIPDVYGVAVPLTPAVNPSTNRAVDLTESILRSAYHCHLTYL 264 Query: 1028 RHYQVKANLVVPVVFNENLWGLLIAHECKTPR 1059 ++ V A+L + ++ + +LWGL+ H +TP+ Sbjct: 265 KNMGVGASLTISLIKDGHLWGLIACHH-QTPK 295 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 55.1 bits (131), Expect = 1e-09 Identities = 47/185 (25%), Positives = 87/185 (47%), Gaps = 12/185 (6%) Query: 913 LKERLQQRNVKEK------LVLKIANKIRASLNINDILYSTVTEVRQFLNTDRVVLFKFN 966 + +R Q +++ +K L+ KI+ +IR SL I + +V R ++ ++ Sbjct: 568 ITDRKQAQDILQKKLNQILLMRKISQEIRRSLQPTLIFQTAARQVGNVFAVSRCLIHNYS 627 Query: 967 SQWSGQV--VTESHNDFCRSIINDEIDDPCFKGHYLRLYREGRVRAVSDIEKADLADCH- 1023 + QV V E S++ EI + + + + R AV D+++ DL H Sbjct: 628 EATTLQVPVVAEYLGGQFTSLLAGEI--AVEQAYDPTIIQGDRAMAVVDLDQ-DLNSTHT 684 Query: 1024 KELLRHYQVKANLVVPVVFNENLWGLLIAHECKTPRYWQEEDLQLLMELATQVAIAIHQG 1083 K + +QVK+ L V + G++ H+C R W ++++LL +A Q+ IA+ Q Sbjct: 685 KAFYQRFQVKSFLAVRTSYQGKANGIIALHQCDRQRVWTADEIELLEAIAEQMGIALAQA 744 Query: 1084 ELYEQ 1088 L E+ Sbjct: 745 ALLEK 749 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.320 0.136 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 115,699 Number of Sequences: 78 Number of extensions: 4932 Number of successful extensions: 59 Number of sequences better than 1.0e-05: 9 Number of HSP's better than 0.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 20 Number of HSP's gapped (non-prelim): 19 length of query: 1276 length of database: 48,235 effective HSP length: 74 effective length of query: 1202 effective length of database: 42,463 effective search space: 51040526 effective search space used: 51040526 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 98 (42.4 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-000608 sll0921 (222 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-000608 sll0921 406 e-116 SYNE-PCC-01-001160 sll1708 166 8e-44 SYNE-PCC-01-001075 sll1592 142 1e-36 SYNE-PCC-01-001575 slr0312 128 2e-32 HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator pr... 121 2e-30 SYNE-PCC-01-001039 sll1544 82 1e-18 SYNE-PCC-01-002731 slr1909 79 1e-17 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 59 2e-11 SYNE-PCC-01-001461 slr0115 57 4e-11 SYNE-PCC-01-000414 sll0649 54 3e-10 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 54 3e-10 SYNE-PCC-01-002489 slr1588 54 4e-10 SYNE-PCC-01-000511 sll0782 53 9e-10 SYNE-PCC-01-002879 slr2104 52 2e-09 SYNE-PCC-01-001306 sll1905 52 2e-09 SYNE-PCC-01-000800 sll1228 50 5e-09 SYNE-PCC-01-000242 sll0396 49 1e-08 SYNE-PCC-01-001132 sll1672 48 2e-08 SYNE-PCC-01-002618 slr1760 48 3e-08 SYNE-PCC-01-001437 slr0081 48 3e-08 SYNE-PCC-01-002951 ssl0564 47 4e-08 SYNE-PCC-01-002672 slr1837 47 4e-08 SYNE-PCC-01-002086 slr1042 47 5e-08 SYNE-PCC-01-002873 slr2098 46 1e-07 SYNE-PCC-01-002788 slr1982 46 1e-07 SYNE-PCC-01-002033 slr0947 46 1e-07 SYNE-PCC-01-001133 sll1673 45 3e-07 SYNE-PCC-01-002486 slr1584 44 6e-07 SYNE-PCC-01-002221 slr1213 43 7e-07 SYNE-PCC-01-002617 slr1759 40 6e-06 >SYNE-PCC-01-000608 sll0921 Length = 222 Score = 406 bits (1044), Expect = e-116 Identities = 209/222 (94%), Positives = 209/222 (94%) Query: 1 MEKIRIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLP 60 MEKIRIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLP Sbjct: 1 MEKIRIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLP 60 Query: 61 DMNGIDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQ 120 DMNGIDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQ Sbjct: 61 DMNGIDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQ 120 Query: 121 ATHGGFAWIDPAIARIVLAHXXXXXXXXXXXXXRTSLSYGLTERELEVLQLIVDGCSNAD 180 ATHGGFAWIDPAIARIVLAH RTSLSYGLTERELEVLQLIVDGCSNAD Sbjct: 121 ATHGGFAWIDPAIARIVLAHAPGAEPSEPSSPSRTSLSYGLTERELEVLQLIVDGCSNAD 180 Query: 181 IAEKLYITVGTVKTHVRNILNKLCANDRTQAAVRAIRSGLVN 222 IAEKLYITVGTVKTHVRNILNKLCANDRTQAAVRAIRSGLVN Sbjct: 181 IAEKLYITVGTVKTHVRNILNKLCANDRTQAAVRAIRSGLVN 222 >SYNE-PCC-01-001160 sll1708 Length = 226 Score = 166 bits (419), Expect = 8e-44 Identities = 90/218 (41%), Positives = 137/218 (62%), Gaps = 8/218 (3%) Query: 4 IRIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMN 63 ++I ++ED+ L++ GL+ AL FE +G NG + PD++++DIGLP ++ Sbjct: 17 MKILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPGLD 76 Query: 64 GIDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQATH 123 GI+ T+Q+K+ + Q +V+LT + ++AA S+GADAYC+K + E LI AI A Sbjct: 77 GIEATKQIKQ--TSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIAAAQ 134 Query: 124 GGFAWIDPAIARIVLAHXXXXXXXXXXXXXRTSLSYGLTERELEVLQLIVDGCSNADIAE 183 G ++DP IAR+V+ + L+ERE++VL+LIV+G SN +IA+ Sbjct: 135 DGATYLDPQIARVVVENLKPPVPEGQADVS------SLSEREIDVLKLIVEGKSNQEIAQ 188 Query: 184 KLYITVGTVKTHVRNILNKLCANDRTQAAVRAIRSGLV 221 LY++ T+KTHVR I+NKL +DR QAAV A+RSGLV Sbjct: 189 TLYLSTNTIKTHVRGIMNKLSVDDRVQAAVIALRSGLV 226 >SYNE-PCC-01-001075 sll1592 Length = 226 Score = 142 bits (357), Expect = 1e-36 Identities = 87/220 (39%), Positives = 118/220 (53%), Gaps = 3/220 (1%) Query: 4 IRIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMN 63 IRI L+ED++L R GL L+ EP + GEA +G + + Q DVVI+D+GLP + Sbjct: 8 IRILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPGIG 67 Query: 64 GIDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQATH 123 GI+ Q+KK ++ Q V+ILT + Q + A A YC+K E L+ AI++ Sbjct: 68 GIEACHQIKK--IHPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLAIRSVA 125 Query: 124 GGFAWIDP-AIARIVLAHXXXXXXXXXXXXXRTSLSYGLTERELEVLQLIVDGCSNADIA 182 G W D A I A LT+RELE+L L+ G SN +IA Sbjct: 126 AGAFWWDAIASQEIQTAFQHSSSTGAVLPLADADGENPLTKRELEILSLVAKGKSNQEIA 185 Query: 183 EKLYITVGTVKTHVRNILNKLCANDRTQAAVRAIRSGLVN 222 ++LYI GTV+ HV IL KL DRTQAA+ AI LV+ Sbjct: 186 DELYIAPGTVRVHVHTILRKLEVRDRTQAALLAIERRLVS 225 >SYNE-PCC-01-001575 slr0312 Length = 209 Score = 128 bits (321), Expect = 2e-32 Identities = 70/219 (31%), Positives = 116/219 (52%), Gaps = 17/219 (7%) Query: 4 IRIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMN 63 IR+ + +D + RQGL + +P + + +A NG + + ++ +PDV ++D+ +P++ Sbjct: 7 IRVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPEVE 66 Query: 64 GIDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQATH 123 G+ + + R+++LT D +E + AGA Y +K++ + L+ AI+ H Sbjct: 67 GVAAISAICA--IVKFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVH 124 Query: 124 GGFAWIDPAIARIVLAHXXXXXXXXXXXXXRTSLSYGLTERELEVLQLIVDGCSNADIAE 183 G +I P + ++ L+ERELEVL + G SNADIA Sbjct: 125 RGQKYIPPDVGAKLVQRLSNPE---------------LSERELEVLGSLAQGMSNADIAT 169 Query: 184 KLYITVGTVKTHVRNILNKLCANDRTQAAVRAIRSGLVN 222 L I GTVK+HV ILNKL DRTQA + A++ G+V+ Sbjct: 170 ALSIGEGTVKSHVNRILNKLDVGDRTQAVIVAVKRGIVS 208 >HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator protein (narP) Length = 208 Score = 121 bits (303), Expect = 2e-30 Identities = 66/212 (31%), Positives = 119/212 (56%), Gaps = 13/212 (6%) Query: 2 EKIRIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPD 61 +K+++ LI+D L+R+G++ + ++ +FE V + ++G G+ + QT PDV+I+D+ + Sbjct: 3 DKLKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKG 62 Query: 62 MNGIDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQA 121 ++G+D + L+ ++ R++ILT++D + + AGAD Y +KD+ + L+E I+ Sbjct: 63 LSGLDTLKGLRAEGVD--ARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKR 120 Query: 122 THGGFAWIDPAIARIVLAHXXXXXXXXXXXXXRTSLSYGLTERELEVLQLIVDGCSNADI 181 G + +I ++L LT+RE+ VL+ I G SN I Sbjct: 121 IAQGEVILSDSIKNLLLERTHEDNPLD-----------SLTDREMGVLRQIATGLSNKQI 169 Query: 182 AEKLYITVGTVKTHVRNILNKLCANDRTQAAV 213 A +L+I+ TVK H+RN+L KL + R A V Sbjct: 170 AAQLFISEETVKVHIRNLLRKLNVHSRVAATV 201 >SYNE-PCC-01-001039 sll1544 Length = 228 Score = 82.0 bits (201), Expect = 1e-18 Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 17/175 (9%) Query: 46 QQTRPDVVIIDIGLPDMNGIDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAY 105 QQ P VV+I L D +G+D+ +QLK + QC ++L LND V A GADA Sbjct: 67 QQPEPLVVVICQRLEDGSGLDLLKQLKAHARSPQC--LLLLLNDHAAIVEEAQQYGADAI 124 Query: 106 CMKDSRTELLIE-AIQATHGGFAWIDPAIARIVLAHXXXXXXXXXXXXXRTSLSYGLTER 164 ++ S I A++ G +ID + I R S LT+R Sbjct: 125 FLESSLGNGEINLAVECLLQGRTYIDSRLEAIA--------------DYRKSQKDELTQR 170 Query: 165 ELEVLQLIVDGCSNADIAEKLYITVGTVKTHVRNILNKLCANDRTQAAVRAIRSG 219 E+ +L+L+ +G +N++I ++L++ TV+ +V+ I+ KL A DRT AA+ +R G Sbjct: 171 EVAILRLVAEGKTNSEIGQELHLASSTVREYVQTIMRKLNARDRTSAAIAGLREG 225 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 79.0 bits (193), Expect = 1e-17 Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 12/219 (5%) Query: 2 EKIRIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPD 61 E + L++D+ + ++D L E V A NGR L ++ T PD+++ DI +P+ Sbjct: 6 ENYHLLLVDDDPNLLLLVKDYL--EYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPE 63 Query: 62 MNGIDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQA 121 M+G +Q+++ P V+ L+ Q + + GAD Y K E L +Q+ Sbjct: 64 MDGYAFIEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQS 123 Query: 122 THGGFAWIDPAIARIVLAHXXXXXXXXXXXXXRTSLSYGLTERELEVLQLIVDGCSNADI 181 A +L H + + LT E +V+QL+ G +N +I Sbjct: 124 C--------LRQADRLLQH--NNHPLEDNARVQVARDVELTPTETKVIQLVAQGLANREI 173 Query: 182 AEKLYITVGTVKTHVRNILNKLCANDRTQAAVRAIRSGL 220 A+ L ++ TV++HV N+LNK ++RT+ A AI+ + Sbjct: 174 ADHLKVSQRTVESHVSNMLNKTGLHNRTELARWAIQKSI 212 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 58.5 bits (140), Expect = 2e-11 Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 33/217 (15%) Query: 4 IRIALIEDEDLIRQGLQDALT-MEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDM 62 +RI LIED++LI GLQ LT + + +W +G+ G+ + D V++D+ LP + Sbjct: 1 MRILLIEDDNLIGNGLQIGLTKLGFAVDWF---TDGKTGMAALTSAPYDAVVLDLTLPKL 57 Query: 63 NGIDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKD-------SRTELL 115 +G++V QQ + + V+ILT D + + +GAD Y K +R + L Sbjct: 58 DGLEVLQQWRSN--HQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQAL 115 Query: 116 IEAIQATHGGFAWIDPAIARIVLAHXXXXXXXXXXXXXRTSLSYGLTERELEVLQLIVDG 175 I H V+ + LT RE ++L+L + Sbjct: 116 IRRRYGYH-----------HSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLELFMLN 164 Query: 176 ----CSNADIAEKL-----YITVGTVKTHVRNILNKL 203 S + I EKL I+ G + H+ N+ KL Sbjct: 165 KDRVLSRSSIEEKLSSWDEEISSGALDVHIYNLRQKL 201 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 57.4 bits (137), Expect = 4e-11 Identities = 51/222 (22%), Positives = 99/222 (44%), Gaps = 12/222 (5%) Query: 5 RIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNG 64 RI +I+D+ I + ++ +E + V +A +G G + Q +PD++++D+ LP ++G Sbjct: 3 RILIIDDDPAISDLV--SINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDG 60 Query: 65 IDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQATHG 124 V Q+L++ V++LT Q + + F +GAD Y K E ++ ++A Sbjct: 61 FTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLR 120 Query: 125 GFAWIDPAIARI-VLAHXXXXXXXXXXXXXRTSLSYGLTERELEVLQLIV----DGCSNA 179 I A +L S LT E E+L ++ S + Sbjct: 121 RTDRIPQAAKHSEILNQGPLTLVPERFEAIWFGKSIKLTHLEFELLHCLLQRHGQTVSPS 180 Query: 180 DIAEKLY-----ITVGTVKTHVRNILNKLCANDRTQAAVRAI 216 DI +++ + T++ H+R++ KL N R ++ + Sbjct: 181 DILREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTV 222 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 54.3 bits (129), Expect = 3e-10 Identities = 31/116 (26%), Positives = 64/116 (55%), Gaps = 2/116 (1%) Query: 6 IALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNGI 65 I ++ED+ I Q +++ L E F + +G GL + Q+ PD++++D+ LP ++G+ Sbjct: 14 ILIVEDDQEIAQLIRETLERE-QFTCI-VTNDGETGLRIFQEQVPDLIVLDLMLPKLDGL 71 Query: 66 DVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQA 121 +V ++++ P + +++LT +E + S GAD Y +K L+ ++A Sbjct: 72 EVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRA 127 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 54.3 bits (129), Expect = 3e-10 Identities = 34/117 (29%), Positives = 63/117 (53%), Gaps = 3/117 (2%) Query: 5 RIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNG 64 +I ++EDE IR+ + AL + + V EA++ + + +++ P ++++D LP +G Sbjct: 4 KILIVEDECAIREMI--ALFLSQKYYDVIEASDFKTAINKIKEN-PKLILLDWMLPGRSG 60 Query: 65 IDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQA 121 I Q +KK +++LT EE +A +AGAD Y K ++L+ I+A Sbjct: 61 IQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEA 117 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 53.9 bits (128), Expect = 4e-10 Identities = 34/118 (28%), Positives = 65/118 (55%), Gaps = 4/118 (3%) Query: 6 IALIEDEDLIRQGLQDALTMEPSFEWVGEAANGR--LGLVMMQQTRPDVVIIDIGLPDMN 63 I ++EDE +IR+ + + L++E +++ + EA NG LGL+ + PD++I D+ +P+M+ Sbjct: 4 ILVVEDEAIIRELIGETLSLE-NYK-ILEAENGAVALGLLNSLEVMPDLIICDVMMPEMD 61 Query: 64 GIDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQA 121 G + L+K + LT + ++GAD Y +K + E L+ A+ + Sbjct: 62 GHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNS 119 >SYNE-PCC-01-000511 sll0782 Length = 369 Score = 52.8 bits (125), Expect = 9e-10 Identities = 27/61 (44%), Positives = 39/61 (63%) Query: 161 LTERELEVLQLIVDGCSNADIAEKLYITVGTVKTHVRNILNKLCANDRTQAAVRAIRSGL 220 L+ERE E++ L+ G + DIAE+L+I+ TVK HV L+KL A +R QA +A G Sbjct: 309 LSEREKEIVSLLAQGLRDRDIAEELHISESTVKFHVNGTLHKLNAKNRYQAIYQATVQGF 368 Query: 221 V 221 + Sbjct: 369 I 369 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 52.0 bits (123), Expect = 2e-09 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 8/135 (5%) Query: 1 MEKIRIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLP 60 +E I L+ED ++ R+ D LT + V A NG+ L ++ D +++DI +P Sbjct: 715 LEGASILLVEDNEINREFAHDLLTSKGLRVQV--ANNGQEALTLLTSNTYDAILMDIQMP 772 Query: 61 DMNGIDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQ 120 +NG D T+ +++ + ++ +T N A AG + + K + +LL + + Sbjct: 773 MLNGYDATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLFQTLA 832 Query: 121 ATHGGFAWIDPAIAR 135 WI P AR Sbjct: 833 ------HWIPPNSAR 841 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 51.6 bits (122), Expect = 2e-09 Identities = 27/80 (33%), Positives = 49/80 (61%), Gaps = 1/80 (1%) Query: 37 NGRLGLVMMQQTRPDVVIIDIGLPDMNGIDVTQQLKKGPLNCQCRVVILTLNDQEETVLA 96 +G L + Q +PD++++D+ +P M+G++V +LK+ P V+ LT +++++ +L Sbjct: 49 SGPEALQRVTQAQPDLILLDLMMPGMDGLEVCDRLKQDPQTRDIPVIFLTASNEKQDLLQ 108 Query: 97 AFSAGADAYCMKD-SRTELL 115 AF+ GA Y K S ELL Sbjct: 109 AFAKGAVDYVTKPFSPPELL 128 Score = 40.0 bits (92), Expect = 6e-06 Identities = 27/114 (23%), Positives = 57/114 (50%), Gaps = 2/114 (1%) Query: 8 LIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNGIDV 67 L+ +++LI Q + L + + V NG+ L + + DVV++D+ +P+M+G+ Sbjct: 743 LLAEDNLINQQVAKLLLKKLGYP-VDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTA 801 Query: 68 TQQLKKGPLNCQCR-VVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQ 120 T+ +++ + ++ +T E ++G + Y K R E L +A+Q Sbjct: 802 TEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKPIRLEALQQALQ 855 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 50.4 bits (119), Expect = 5e-09 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 1/92 (1%) Query: 32 VGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNGIDVTQQLKKGPLNCQCRVVILTLNDQE 91 V EA NG + + + + P V+++D+ +P ++G TQ++K P ++ LT + E Sbjct: 444 VQEAENGEMAIALWESWHPQVILMDMQMPVLDGRSTTQKIKASPQGQHTIIIALTASAFE 503 Query: 92 ETVLAAFSAGADAYCMKDSRTELLIEAIQATH 123 SAG D + K R E LI A+ A H Sbjct: 504 GERAEILSAGCDDFLSKPFRPEELI-ALLAKH 534 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 49.3 bits (116), Expect = 1e-08 Identities = 27/104 (25%), Positives = 60/104 (57%), Gaps = 4/104 (3%) Query: 5 RIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNG 64 R+ ++E+E+ + + ++ L E ++ V A +G G Q+ PD++I++ LP M+G Sbjct: 4 RVLVVEEEEKLARFMELELKYE-GYD-VSVARDGLKGFTQAQEFPPDLIIVNGALPGMSG 61 Query: 65 IDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMK 108 +++ ++L++ + + ++++T D E + AGAD Y +K Sbjct: 62 LELCRRLRE--MGSRIPIILITAKDDVEERVMGLDAGADDYIVK 103 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 48.1 bits (113), Expect = 2e-08 Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 3/125 (2%) Query: 5 RIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNG 64 +I +++D+ + RQ L L P + EA+NG+ + + + P ++ +D+ +P M+G Sbjct: 631 KILVVDDKSVNRQLLIKLLA--PFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDG 688 Query: 65 IDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQATHG 124 + T+ +K VV LT + EE SAG D + K R + +++ H Sbjct: 689 YEATKYIKGQVKGNATAVVALTASVLEEEKAIVLSAGCDDFLRKPFRENTIFDSL-TKHL 747 Query: 125 GFAWI 129 G ++ Sbjct: 748 GVTYV 752 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 47.8 bits (112), Expect = 3e-08 Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 2/116 (1%) Query: 5 RIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNG 64 +I +++D+ +R L+ L E V A NG L + +P+VV++D +P M+G Sbjct: 13 KILVVDDDGFMRMQLRVYLQKEG--HRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDG 70 Query: 65 IDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQ 120 Q L K N V+++T D E +V AF AGA Y K +L + ++ Sbjct: 71 FACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVK 126 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 47.8 bits (112), Expect = 3e-08 Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 11/124 (8%) Query: 5 RIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQ-------QTRPDVVIIDI 57 RI ++EDE IR+ + +L E +E V +GR L ++Q Q D++I+DI Sbjct: 32 RILVVEDEVSIRETIVLSL-QEEGYE-VYAVDDGRDALALLQEFSEDPGQAAVDLIILDI 89 Query: 58 GLPDMNGIDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIE 117 LP +NG+DV + L+ G N ++I++ E + GAD Y K + L+ Sbjct: 90 MLPQVNGLDVCRSLRFGGDNTP--ILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVA 147 Query: 118 AIQA 121 +A Sbjct: 148 RCRA 151 >SYNE-PCC-01-002951 ssl0564 Length = 89 Score = 47.4 bits (111), Expect = 4e-08 Identities = 24/61 (39%), Positives = 38/61 (62%) Query: 161 LTERELEVLQLIVDGCSNADIAEKLYITVGTVKTHVRNILNKLCANDRTQAAVRAIRSGL 220 L++RELE+L L+ G +N +++E+L I+ TV HV NIL K +R + A++ G Sbjct: 12 LSDRELEILDLVAIGLTNQEVSERLEISKRTVDNHVSNILTKTNTENRVELVRWALQWGK 71 Query: 221 V 221 V Sbjct: 72 V 72 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 47.4 bits (111), Expect = 4e-08 Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 4/116 (3%) Query: 6 IALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNGI 65 I L++DE+ + + L AL + + A G+ GL M + D++I+D LP ++G+ Sbjct: 4 ILLVDDENALTEPLSKALGHQG--HTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGL 61 Query: 66 DVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQA 121 ++ +Q++ L V+ LT D + +A AG D Y +K L+ ++A Sbjct: 62 EICRQIR--ILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFELRELLARVRA 115 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 47.0 bits (110), Expect = 5e-08 Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 4/116 (3%) Query: 6 IALIEDEDLIRQGLQDALTMEPSFEW-VGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNG 64 + L+ED R+ + L W V A +G L +Q PD+V++DI +P MNG Sbjct: 30 VLLVEDSSSQREMISGILK---DHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNG 86 Query: 65 IDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQ 120 +V +++K P V++ + +E GADAY K + L+ I+ Sbjct: 87 YEVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIK 142 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 45.8 bits (107), Expect = 1e-07 Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 2/111 (1%) Query: 5 RIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNG 64 RI L+ED + I Q + L + F V AANG + L + +V++D+ +P+M+G Sbjct: 926 RILLVEDNE-INQEVAAELLRDVGFN-VDVAANGLIALERLNNNAYALVLMDMQMPEMDG 983 Query: 65 IDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELL 115 I+ T +++ P Q +V +T N + AG + + K E L Sbjct: 984 IEATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEEL 1034 Score = 45.1 bits (105), Expect = 2e-07 Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 3/127 (2%) Query: 1 MEKIRIALIEDEDLIRQGLQDALT-MEPSFEWV--GEAANGRLGLVMMQQTRPDVVIIDI 57 +E R+ +++D D R ++D L M+ E V G A L + +V ID Sbjct: 768 LEGKRVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDW 827 Query: 58 GLPDMNGIDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIE 117 +P+M+G++V ++LK LN Q + I+T +EE + A S G D +K +L + Sbjct: 828 QMPNMDGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISPSVLFD 887 Query: 118 AIQATHG 124 ++ G Sbjct: 888 SLARVLG 894 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 45.8 bits (107), Expect = 1e-07 Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 2/117 (1%) Query: 5 RIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNG 64 ++ L+ED ++ R L L + +E V A +G + M P ++++D+ LP ++G Sbjct: 6 KVLLVEDNEMNRDMLSRRL-IRKGYEVV-IAVDGEQAVTMAISESPQLILMDMSLPIIDG 63 Query: 65 IDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQA 121 T+Q+K P ++ LT + A +AG D Y K + L++ ++A Sbjct: 64 WTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEA 120 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 45.8 bits (107), Expect = 1e-07 Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 5/101 (4%) Query: 8 LIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNGIDV 67 +++DE IR+ L+ L+M +E V AA+G + ++ PD+V++D+ +P ++G V Sbjct: 1 MVDDEASIRRILETRLSMI-GYEVV-TAADGEEAIATFHESDPDLVVLDVMMPKLDGYGV 58 Query: 68 TQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMK 108 Q+L+K +++LT + GAD Y +K Sbjct: 59 CQELRK---ESDIPIIMLTALGDVADRITGLELGADDYVVK 96 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 44.7 bits (104), Expect = 3e-07 Identities = 23/89 (25%), Positives = 44/89 (49%) Query: 32 VGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNGIDVTQQLKKGPLNCQCRVVILTLNDQE 91 V +G++ L +Q RPD++++DI +PDM+G V + +KK ++ ++ Sbjct: 35 VRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQVCEMIKKEEELQDIPIIFISALGDT 94 Query: 92 ETVLAAFSAGADAYCMKDSRTELLIEAIQ 120 + AF G Y K + E ++ I+ Sbjct: 95 FDKVKAFECGGVDYITKPFQIEEVVARIE 123 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 43.5 bits (101), Expect = 6e-07 Identities = 51/223 (22%), Positives = 95/223 (42%), Gaps = 19/223 (8%) Query: 4 IRIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMN 63 +RI L+ED+ + + L +AL+ + V A + L + D+VI+D+ LP+++ Sbjct: 1 MRILLVEDDLPLAETLAEALSDQ--LYTVDIATDASLAWDYASRLEYDLVILDVMLPELD 58 Query: 64 GIDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQA-T 122 GI + Q+ + + ++++T D + AGAD Y +K L ++A Sbjct: 59 GITLCQKWRSH--SYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALL 116 Query: 123 HGGFAWIDPAIARIVLAHXXXXXXXXXXXXXRTSLSYGLTERELEVLQLIVDG----CSN 178 G A P VL + LT +E +L+L++ S Sbjct: 117 RRGCATCQP-----VLEWGPIRLDPSTYEVSYDNEVLSLTRKEYSILELLLRNGRRVLSR 171 Query: 179 ADIAEKLYITVG-----TVKTHVRNILNKLCANDRTQAAVRAI 216 + I + ++ TVK HVR++ KL + + A+ + Sbjct: 172 SMIIDSIWKLESPPEEDTVKVHVRSLRQKLKSAGLSADAIETV 214 >SYNE-PCC-01-002221 slr1213 Length = 241 Score = 43.1 bits (100), Expect = 7e-07 Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 5/116 (4%) Query: 5 RIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLP-DMN 63 +I ++EDE L+ Q + L + +E A++G L + + PD+V++DI + +++ Sbjct: 4 KILIVEDERLVAQHIAQLLKSD-GYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEID 62 Query: 64 GIDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAI 119 GI+V +++K +V LT ET+ A Y +K R E L+ + Sbjct: 63 GIEVAERIKS---LYSIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTV 115 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 40.0 bits (92), Expect = 6e-06 Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 2/116 (1%) Query: 8 LIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNGIDV 67 L+ +++L+ Q + + + V A NG+ + +++ D+V++D+ +P M+GI Sbjct: 1193 LLAEDNLVNQKVAHQMLNNLGYP-VAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGITA 1251 Query: 68 TQQLKKG-PLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQAT 122 + +++ PL Q R+V +T N AG D Y K L + +Q T Sbjct: 1252 CRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQLRKVLQDT 1307 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.321 0.137 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 17,798 Number of Sequences: 78 Number of extensions: 656 Number of successful extensions: 57 Number of sequences better than 1.0e-05: 30 Number of HSP's better than 0.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 16 Number of HSP's gapped (non-prelim): 33 length of query: 222 length of database: 48,235 effective HSP length: 60 effective length of query: 162 effective length of database: 43,555 effective search space: 7055910 effective search space used: 7055910 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 91 (39.7 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-000727 sll1120 (1200 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-000727 sll1120 1778 0.0 >SYNE-PCC-01-000727 sll1120 Length = 1200 Score = 1778 bits (4604), Expect = 0.0 Identities = 959/1200 (79%), Positives = 959/1200 (79%) Query: 1 MVYVKRIELSHFKSFGGTTAIPFLPGFTVVSGPNGSGKSNILDALLFCLGLATSKGMRAE 60 MVYVKRIELSHFKSFGGTTAIPFLPGFTVVSGPNGSGKSNILDALLFCLGLATSKGMRAE Sbjct: 1 MVYVKRIELSHFKSFGGTTAIPFLPGFTVVSGPNGSGKSNILDALLFCLGLATSKGMRAE 60 Query: 61 RLPDLVNNTFKGNRGSSEASVSVTFELHDGENLSEPXXXXXXXXXXXKISKEWTVTRRLK 120 RLPDLVNNTFKGNRGSSEASVSVTFELHDGENLSEP KISKEWTVTRRLK Sbjct: 61 RLPDLVNNTFKGNRGSSEASVSVTFELHDGENLSEPGANHNGNGNGAKISKEWTVTRRLK 120 Query: 121 VTKGGNYSSNYYINGETATVTELHEQLNELRIYPEGYNIVLQGDVTRIITMNSKERREII 180 VTKGGNYSSNYYINGETATVTELHEQLNELRIYPEGYNIVLQGDVTRIITMNSKERREII Sbjct: 121 VTKGGNYSSNYYINGETATVTELHEQLNELRIYPEGYNIVLQGDVTRIITMNSKERREII 180 Query: 181 DELAGVAEFDRKIVKTKETLTEVQDREERCQIIATELERTLERLAADRQKAEKYQALRQQ 240 DELAGVAEFDRKIVKTKETLTEVQDREERCQIIATELERTLERLAADRQKAEKYQALRQQ Sbjct: 181 DELAGVAEFDRKIVKTKETLTEVQDREERCQIIATELERTLERLAADRQKAEKYQALRQQ 240 Query: 241 VQEKQGWAKVIQYKAVEQQRQKLWGQLERDREQSQQIQQALDQRSQAIQTQQTELEKLNA 300 VQEKQGWAKVIQYKAVEQQRQKLWGQLERDREQSQQIQQALDQRSQAIQTQQTELEKLNA Sbjct: 241 VQEKQGWAKVIQYKAVEQQRQKLWGQLERDREQSQQIQQALDQRSQAIQTQQTELEKLNA 300 Query: 301 QVKXXXXXXXXXXXXXXXXXXXXRDQLQQRYNDGDRQITNHQQQVGXXXXXXXXXXXXXX 360 QVK RDQLQQRYNDGDRQITNHQQQVG Sbjct: 301 QVKALGEEEQLAVAAQLATQKAQRDQLQQRYNDGDRQITNHQQQVGQIQAEISQSQQQFL 360 Query: 361 XXXXEKSFHNTQTLPQLEXXXXXXXXXXXXXXXXXXXIASASEAWVQEQTQLSRTVNQLQ 420 EKSFHNTQTLPQLE IASASEAWVQEQTQLSRTVNQLQ Sbjct: 361 HIQQEKSFHNTQTLPQLEAAVQTSQQQLEQLRHQAQAIASASEAWVQEQTQLSRTVNQLQ 420 Query: 421 DELIPXXXXXXXXXXXXXXXXXXXXXXXXXXXKVSVELEEKQFAQGQFNFQGEALTSQIQ 480 DELIP KVSVELEEKQFAQGQFNFQGEALTSQIQ Sbjct: 421 DELIPQRSQLAQLEERQQQLLTNLAELTPLLTKVSVELEEKQFAQGQFNFQGEALTSQIQ 480 Query: 481 TLASDLAQLEQERSLLQETQTXXXXXXXXXXXXXXXXXAASQAQQEVQGTYATKVILQSD 540 TLASDLAQLEQERSLLQETQT AASQAQQEVQGTYATKVILQSD Sbjct: 481 TLASDLAQLEQERSLLQETQTRLLKEQQEKQRQLDKLEAASQAQQEVQGTYATKVILQSD 540 Query: 541 LPGVCGLVAQLGQVEPQYQLALEIAAGGRLGFLVVEDDGVAAAGIEILKQAKAGRATFLP 600 LPGVCGLVAQLGQVEPQYQLALEIAAGGRLGFLVVEDDGVAAAGIEILKQAKAGRATFLP Sbjct: 541 LPGVCGLVAQLGQVEPQYQLALEIAAGGRLGFLVVEDDGVAAAGIEILKQAKAGRATFLP 600 Query: 601 LNKIRPPKGQNPNLSYAHGYIDLAVNLIDGDRRYADIFAFIFGNTIVFDTLVNARNHLGK 660 LNKIRPPKGQNPNLSYAHGYIDLAVNLIDGDRRYADIFAFIFGNTIVFDTLVNARNHLGK Sbjct: 601 LNKIRPPKGQNPNLSYAHGYIDLAVNLIDGDRRYADIFAFIFGNTIVFDTLVNARNHLGK 660 Query: 661 HRIVTLEGDLLEASGAMSGGSRNQRSGLRFGTMVSEDTAEVKQLRQRLQDIQQVQGRNEE 720 HRIVTLEGDLLEASGAMSGGSRNQRSGLRFGTMVSEDTAEVKQLRQRLQDIQQVQGRNEE Sbjct: 661 HRIVTLEGDLLEASGAMSGGSRNQRSGLRFGTMVSEDTAEVKQLRQRLQDIQQVQGRNEE 720 Query: 721 LLLERTVRSXXXXXXXXXXXXXXXXXXXHGEQTERDIARXXXXXXXXXXXXXXXXXXXXX 780 LLLERTVRS HGEQTERDIAR Sbjct: 721 LLLERTVRSRQLTQQLMEMRQQQREAQLHGEQTERDIARLSQQQTQINQQQINQQQKLAE 780 Query: 781 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTVEAEYQRQLQALR 840 RTVEAEYQRQLQALR Sbjct: 781 LQQNLALLQQSLPPLEQQLASAQQQLTALETSQTHQQWQTIQIQIRTVEAEYQRQLQALR 840 Query: 841 QGEDHLKDLQNSSQRLEEKIAQAQEKIAQHQAQDLTLAQEQEQLKIALAEMNGAIQTTEA 900 QGEDHLKDLQNSSQRLEEKIAQAQEKIAQHQAQDLTLAQEQEQLKIALAEMNGAIQTTEA Sbjct: 841 QGEDHLKDLQNSSQRLEEKIAQAQEKIAQHQAQDLTLAQEQEQLKIALAEMNGAIQTTEA 900 Query: 901 QLAKLSEKLGSTKQERDRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 960 QLAKLSEKLGSTKQERDRL Sbjct: 901 QLAKLSEKLGSTKQERDRLETQLNQLRSQQQEQQWQWEKLQTNQQEYQENLTQLQTQLEA 960 Query: 961 XXXDLPDPWPEIPLLQDRDEANLDFANILEELERSIRNGQKRLEAMEPVNMLALQEYEKT 1020 DLPDPWPEIPLLQDRDEANLDFANILEELERSIRNGQKRLEAMEPVNMLALQEYEKT Sbjct: 961 LEQDLPDPWPEIPLLQDRDEANLDFANILEELERSIRNGQKRLEAMEPVNMLALQEYEKT 1020 Query: 1021 EARLGELSEKLQTIAGERTELLLRIENFTTLRRRSFQDAFDAVNKNFQIIFAELSDGDGY 1080 EARLGELSEKLQTIAGERTELLLRIENFTTLRRRSFQDAFDAVNKNFQIIFAELSDGDGY Sbjct: 1021 EARLGELSEKLQTIAGERTELLLRIENFTTLRRRSFQDAFDAVNKNFQIIFAELSDGDGY 1080 Query: 1081 LQLDDAEDPFNGGLNLVAHPKGKPVRRLSSMSGGEKSLTALSFIFALQRYRPSPFYGFDE 1140 LQLDDAEDPFNGGLNLVAHPKGKPVRRLSSMSGGEKSLTALSFIFALQRYRPSPFYGFDE Sbjct: 1081 LQLDDAEDPFNGGLNLVAHPKGKPVRRLSSMSGGEKSLTALSFIFALQRYRPSPFYGFDE 1140 Query: 1141 VDMFLDGANVEKLSKMVRKQAQQAQFIVVSLRRPMIEAAERTIGVTQARGAHTQVLGIKL 1200 VDMFLDGANVEKLSKMVRKQAQQAQFIVVSLRRPMIEAAERTIGVTQARGAHTQVLGIKL Sbjct: 1141 VDMFLDGANVEKLSKMVRKQAQQAQFIVVSLRRPMIEAAERTIGVTQARGAHTQVLGIKL 1200 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.315 0.132 0.356 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,521 Number of Sequences: 78 Number of extensions: 3878 Number of successful extensions: 106 Number of sequences better than 1.0e-05: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 87 Number of HSP's gapped (non-prelim): 12 length of query: 1200 length of database: 48,235 effective HSP length: 73 effective length of query: 1127 effective length of database: 42,541 effective search space: 47943707 effective search space used: 47943707 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 98 (42.4 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-000800 sll1228 (633 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-000800 sll1228 1209 0.0 SYNE-PCC-01-001132 sll1672 332 2e-93 SYNE-PCC-01-002879 slr2104 216 2e-58 SYNE-PCC-01-002873 slr2098 186 2e-49 SYNE-PCC-01-002617 slr1759 167 7e-44 SYNE-PCC-01-000295 sll0474 165 3e-43 SYNE-PCC-01-000891 sll1353 156 2e-40 SYNE-PCC-01-001294 sll1888 152 4e-39 SYNE-PCC-01-001280 sll1871 148 6e-38 SYNE-PCC-01-002778 slr1969 140 2e-35 SYNE-PCC-01-001306 sll1905 133 2e-33 SYNE-PCC-01-001509 slr0210 132 2e-33 SYNE-PCC-01-001517 slr0222 94 1e-21 SYNE-PCC-01-000985 sll1475 94 2e-21 SYNE-PCC-01-001690 slr0473 86 4e-19 SYNE-PCC-01-002788 slr1982 85 6e-19 SYNE-PCC-01-000414 sll0649 70 3e-14 SYNE-PCC-01-002635 slr1783 66 3e-13 SYNE-PCC-01-002731 slr1909 64 1e-12 SYNE-PCC-01-001133 sll1673 64 2e-12 SYNE-PCC-01-001461 slr0115 63 2e-12 SYNE-PCC-01-002033 slr0947 59 3e-11 SYNE-PCC-01-001575 slr0312 55 6e-10 SYNE-PCC-01-002086 slr1042 55 8e-10 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 55 8e-10 SYNE-PCC-01-002489 slr1588 54 1e-09 SYNE-PCC-01-002618 slr1760 54 1e-09 SYNE-PCC-01-001437 slr0081 53 3e-09 SYNE-PCC-01-000518 sll0789 52 7e-09 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 52 7e-09 SYNE-PCC-01-000608 sll0921 51 1e-08 SYNE-PCC-01-002672 slr1837 49 4e-08 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 49 4e-08 SYNE-PCC-01-000523 sll0797 49 5e-08 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 48 1e-07 SYNE-PCC-01-000242 sll0396 47 1e-07 SYNE-PCC-01-001160 sll1708 46 3e-07 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 1209 bits (3127), Expect = 0.0 Identities = 610/633 (96%), Positives = 610/633 (96%) Query: 1 MRFAIEQLGLLFGCQRVHVIYHDPAKDCLHMAEEWCAVGIAPRLSTFQGVPVATYPWLWA 60 MRFAIEQLGLLFGCQRVHVIYHDPAKDCLHMAEEWCAVGIAPRLSTFQGVPVATYPWLWA Sbjct: 1 MRFAIEQLGLLFGCQRVHVIYHDPAKDCLHMAEEWCAVGIAPRLSTFQGVPVATYPWLWA 60 Query: 61 NLQDSEGVLVRDVEQMPPEAEMDKVSLQFDLVKSILVVPMVKDAQVLGYISMVHLHDNYG 120 NLQDSEGVLVRDVEQMPPEAEMDKVSLQFDLVKSILVVPMVKDAQVLGYISMVHLHDNYG Sbjct: 61 NLQDSEGVLVRDVEQMPPEAEMDKVSLQFDLVKSILVVPMVKDAQVLGYISMVHLHDNYG 120 Query: 121 WNPEELNLAKLVGQFLAIAQARHQAETTLTQXXXXXXXXXXXKTEFLASISHELRTPLNA 180 WNPEELNLAKLVGQFLAIAQARHQAETTLTQ KTEFLASISHELRTPLNA Sbjct: 121 WNPEELNLAKLVGQFLAIAQARHQAETTLTQAKEAADAANRAKTEFLASISHELRTPLNA 180 Query: 181 IIGFSQLLHRDPSLAPHRPTLDIINRSGEHLLELINDILEMSKIEAGRTTLNEKIIDCHR 240 IIGFSQLLHRDPSLAPHRPTLDIINRSGEHLLELINDILEMSKIEAGRTTLNEKIIDCHR Sbjct: 181 IIGFSQLLHRDPSLAPHRPTLDIINRSGEHLLELINDILEMSKIEAGRTTLNEKIIDCHR 240 Query: 241 LLDNLQALFQLRAQEKQLLLKVERSPEVPEWIKTDGGKLRQVLINLLANAIKFTAQGGVT 300 LLDNLQALFQLRAQEKQLLLKVERSPEVPEWIKTDGGKLRQVLINLLANAIKFTAQGGVT Sbjct: 241 LLDNLQALFQLRAQEKQLLLKVERSPEVPEWIKTDGGKLRQVLINLLANAIKFTAQGGVT 300 Query: 301 LKVKCLTAPQTDEGQGASIWLHFLVSDTGPGIAAHEMDELFVPFAQTETGLKSCQGNGLG 360 LKVKCLTAPQTDEGQGASIWLHFLVSDTGPGIAAHEMDELFVPFAQTETGLKSCQGNGLG Sbjct: 301 LKVKCLTAPQTDEGQGASIWLHFLVSDTGPGIAAHEMDELFVPFAQTETGLKSCQGNGLG 360 Query: 361 LPISQKFVQLMGGQIQVRSKVDQGSAFFFAIPVQVMAAPKPTPETSAVTLPPLDQYNQKV 420 LPISQKFVQLMGGQIQVRSKVDQGSAFFFAIPVQVMAAPKPTPETSAVTLPPLDQYNQKV Sbjct: 361 LPISQKFVQLMGGQIQVRSKVDQGSAFFFAIPVQVMAAPKPTPETSAVTLPPLDQYNQKV 420 Query: 421 LVVDDRPEXXXXXXXXXXXXGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRSTT 480 LVVDDRPE GFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRSTT Sbjct: 421 LVVDDRPESRLLLRQLLTSLGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRSTT 480 Query: 481 QKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIALLAKHLAVALP 540 QKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIALLAKHLAVALP Sbjct: 481 QKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIALLAKHLAVALP 540 Query: 541 SQGQPPASPLRPFPVITAPSLSEQLAKTPQSWRQKMAKMALECNDDDLITLVESLPTLSP 600 SQGQPPASPLRPFPVITAPSLSEQLAKTPQSWRQKMAKMALECNDDDLITLVESLPTLSP Sbjct: 541 SQGQPPASPLRPFPVITAPSLSEQLAKTPQSWRQKMAKMALECNDDDLITLVESLPTLSP 600 Query: 601 SLAHLLATWAREYRFEQIFLVVESSFGAVTLAG 633 SLAHLLATWAREYRFEQIFLVVESSFGAVTLAG Sbjct: 601 SLAHLLATWAREYRFEQIFLVVESSFGAVTLAG 633 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 332 bits (851), Expect = 2e-93 Identities = 194/491 (39%), Positives = 274/491 (55%), Gaps = 16/491 (3%) Query: 144 QAETTLTQXXXXXXXXXXXKTEFLASISHELRTPLNAIIGFSQLLHRDPSLAPHR-PTLD 202 Q + L + K+ F+A++SHELR+PLNAIIGFSQL+ R +L + Sbjct: 346 QKQVDLVRAKEIAESEAKAKSTFVANMSHELRSPLNAIIGFSQLMLRTKNLPMEQYENAG 405 Query: 203 IINRSGEHLLELINDILEMSKIEAGRTTLNEKIIDCHRLLDNLQALFQLRAQEKQLLLKV 262 II RSGE+LL LIN+IL+ SKIEAG+T LN D + LLD+L+ + L+A + + L Sbjct: 406 IIQRSGEYLLNLINNILDFSKIEAGKTHLNRHNFDLYLLLDDLEDMLHLKAANEGIELIF 465 Query: 263 ERSPEVPEWIKTDGGKLRQVLINLLANAIKFTAQGGVTLKVKCLTA-------PQTDEGQ 315 R ++P ++ D KLRQ+L+NLL+NAIKFT +G V L A P+T Sbjct: 466 IRDHDLPRYVYGDEIKLRQILLNLLSNAIKFTTEGEVVLTSNFRNAEQQEVINPETSTEP 525 Query: 316 GASIWLHFLVSDTGPGIAAHEMDELFVPFAQTETGLKSCQGNGLGLPISQKFVQLMGGQI 375 WL F + DTG GI+ E+ LF F+QTE+G + +G GLGL I+++F++LMGG I Sbjct: 526 KNKYWLDFTIKDTGKGISEVELSHLFEAFSQTESGRNAQEGTGLGLAITRQFIKLMGGDI 585 Query: 376 QVRSKVDQGSAFFFAIPV---QVMAAPKPTPETSAVTLPPLDQYNQKVLVVDDRPEXXXX 432 V S VDQG+ F F+I V ++ + +P + L P Q K+LVVDD+ Sbjct: 586 NVSSVVDQGTTFSFSILVDLGEITLSREPNSAKKVLALTP-GQPVYKILVVDDKSVNRQL 644 Query: 433 XXXXXXXXGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRSTTQKIKASPQGQHT 492 GF ++EA NG+ AIALWESW P +I MDM+MPV+DG T+ IK +G T Sbjct: 645 LIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYEATKYIKGQVKGNAT 704 Query: 493 IIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIALLAKHLAVALPSQGQPPASPLRP 552 ++ALTAS E E+A +LSAGCDDFL KPFR + L KHL V + P + Sbjct: 705 AVVALTASVLEEEKAIVLSAGCDDFLRKPFRENTIFDSLTKHLGVTYVYESAPNKNDNHE 764 Query: 553 FPVITAPSLSEQLAKTPQSWRQKMAKMALECNDDDLITLVESLPTLSPSLAHLLATWARE 612 + E Q W +++ LE + + ++ L+ +P L L R Sbjct: 765 DTALK----PESFLIMSQDWLTQLSHYLLEADTEQVMKLIAEIPASESELEQNLTKLVRR 820 Query: 613 YRFEQIFLVVE 623 + FE+I ++E Sbjct: 821 FEFEKILDLIE 831 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 216 bits (549), Expect = 2e-58 Identities = 148/440 (33%), Positives = 227/440 (51%), Gaps = 20/440 (4%) Query: 124 EELNLAKLVGQFLAIAQARHQAETTLTQXXXXXXXXXXXKTEFLASISHELRTPLNAIIG 183 E LN KL + Q ++ +L + K+EFLA++SHE+RTP+NAIIG Sbjct: 420 EHLN-EKLEQRIQERTQELENSQESLLEAKLVAEGATKAKSEFLANMSHEIRTPMNAIIG 478 Query: 184 FSQLLHRDPSLAPHRPTLDIINRSGEHLLELINDILEMSKIEAGRTTLNEKIIDCHRLLD 243 S+L+ + + R L + +GE LL +IN+IL+ SK+EAG+ L +K ++ Sbjct: 479 MSELVLQTDLTSQQRNYLQKVQYAGELLLGIINNILDFSKMEAGKLELEQKPFSVEEVMG 538 Query: 244 NLQALFQLRAQEKQLLLKVERSPEVPEWIKTDGGKLRQVLINLLANAIKFTAQGGVTLKV 303 NL ++ ++A+ K L L P +P + D +L Q+LINL NA+KFT QG +T++ Sbjct: 539 NLHSILGIQAEAKGLTLNFHLDPRIPPILVGDRLRLSQILINLGNNAVKFTNQGEITIRG 598 Query: 304 KCLTAPQTDEGQGASIWLHFLVSDTGPGIAAHEMDELFVPFAQTETGL-KSCQGNGLGLP 362 + L +T+ Q L F V+DTG G+ + +LF F Q ET + G GLGL Sbjct: 599 QLL---KTENEQTK---LQFSVTDTGIGLTPDQQSKLFQWFNQGETSTSRQYGGTGLGLA 652 Query: 363 ISQKFVQLMGGQIQVRSKVDQGSAFFFAIPVQVMAAPKPTPE-----------TSAVTLP 411 IS+ +LMGG I + S V QGS F F + + A+P + +VT Sbjct: 653 ISKSLTELMGGDIWLESVVGQGSTFHFTVCLGT-ASPAVAQDYLVSRVSILEAKPSVTQA 711 Query: 412 PLDQYNQKVLVVDDRPEXXXXXXXXXXXXGFVVQEAENGEMAIALWESWHPQVILMDMQM 471 +L+V+D G VQ A NG+ A+ L S ILMD+QM Sbjct: 712 ITQLEGASILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQM 771 Query: 472 PVLDGRSTTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIALL 531 P+L+G T+ I+ ++ IIA+TA+A G++ + L AG +D L+KP +P+ L L Sbjct: 772 PMLNGYDATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLFQTL 831 Query: 532 AKHLAVALPSQGQPPASPLR 551 A + + + P+S L+ Sbjct: 832 AHWIPPNSAREKKNPSSNLK 851 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 186 bits (471), Expect = 2e-49 Identities = 130/397 (32%), Positives = 192/397 (48%), Gaps = 18/397 (4%) Query: 145 AETTLTQXXXXXXXXXXXKTEFLASISHELRTPLNAIIGFSQLLHRDPSLAPHRPTLDII 204 AE + + K +FLA++SHE+RTP+NA+IG + L + R L I Sbjct: 509 AEAEMKRAKELAEEASRIKADFLANMSHEIRTPMNAVIGMTHLALKTDLTPRQREYLHKI 568 Query: 205 NRSGEHLLELINDILEMSKIEAGRTTLNEKIIDCHRLLDNLQALFQLRAQEKQLLLKVER 264 SG+HLL +INDIL+ SKIEAG+ + D ++LDN+ L +A K L L + Sbjct: 569 RFSGQHLLGVINDILDFSKIEAGKLPMESIDFDLDKVLDNVATLISEKATNKGLELLFDI 628 Query: 265 SPEVPEWIKTDGGKLRQVLINLLANAIKFTAQGGVTLKVKCLTAPQTDEGQGASIWLHFL 324 +P D +L Q+LIN NA+KFT QG +T+ V+ E + + L+ Sbjct: 629 DRNLPRHFIGDPLRLGQILINYANNAVKFTEQGDITIVVR------LQEYRDQDVVLYLA 682 Query: 325 VSDTGPGIAAHEMDELFVPFAQTETG-LKSCQGNGLGLPISQKFVQLMGGQIQVRSKVDQ 383 V DTG GI + LF F Q ++ ++ G GLGL I ++ +LMGG++ V S+ Q Sbjct: 683 VKDTGIGIKPEHIANLFNSFQQADSSTTRNFGGTGLGLAICKRIAELMGGEVGVESEYGQ 742 Query: 384 GSAFFFAIPVQVMAAPKPTPETSAVTLPPLDQYNQKVLVVDDRPEXXXXXXXXXXXXGFV 443 GS F+ + +Q P ++ D ++VLVVDD FV Sbjct: 743 GSTFWAKVCLQ---KSNVIPHRLVLS---KDLEGKRVLVVDDNDHARLVMKDLLEQMKFV 796 Query: 444 VQEAENGEMAI-----ALWESWHPQVILMDMQMPVLDGRSTTQKIKASPQGQHTIIIALT 498 V+ E+G A+ A E+ ++ +D QMP +DG +++KA I +T Sbjct: 797 VETVESGPEALNFLAEADRENHPHSIVFIDWQMPNMDGLEVARRLKAMGLNHQPSIFIVT 856 Query: 499 ASAFEGERAEILSAGCDDFLSKPFRPEELIALLAKHL 535 A E + S G DD L KP P L LA+ L Sbjct: 857 AYGREELFVKAKSLGIDDVLVKPISPSVLFDSLARVL 893 Score = 71.6 bits (174), Expect = 7e-15 Identities = 42/122 (34%), Positives = 62/122 (50%) Query: 419 KVLVVDDRPEXXXXXXXXXXXXGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRS 478 ++L+V+D GF V A NG +A+ + ++LMDMQMP +DG Sbjct: 926 RILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIE 985 Query: 479 TTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIALLAKHLAVA 538 T I+ +P+ I+A+TA+ +G+R L AG +D L KP PEEL L + V Sbjct: 986 ATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEELWNKLLHWIPVD 1045 Query: 539 LP 540 P Sbjct: 1046 SP 1047 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 167 bits (424), Expect = 7e-44 Identities = 146/488 (29%), Positives = 218/488 (44%), Gaps = 40/488 (8%) Query: 62 LQDSEGVLVRDVEQMPPEAEMDKVSLQFDLVKSILVVPMVKDAQVLGYISMVHLHDNYGW 121 +Q + V D++Q + K Q VKS L V + G I++ W Sbjct: 664 IQGDRAMAVVDLDQ-DLNSTHTKAFYQRFQVKSFLAVRTSYQGKANGIIALHQCDRQRVW 722 Query: 122 NPEELNLAKLVGQFLAIAQARH--------------QAETTLTQXXXXXXXXXXXKTEFL 167 +E+ L + + + + IA A+ Q L + K EFL Sbjct: 723 TADEIELLEAIAEQMGIALAQAALLEKERERRRELAQKNLELEKATWAAEAANRAKGEFL 782 Query: 168 ASISHELRTPLNAIIGFSQLLHRDPSLAPHRPTLDIINRSGEHLLELINDILEMSKIEAG 227 A +SHE+RTP+N +IG ++LL + I +SGE LL +INDIL+ SKIEA Sbjct: 783 AMMSHEIRTPMNGVIGMTELLIMTDLNLQQLDYVQTIRQSGETLLTIINDILDFSKIEAD 842 Query: 228 RTTLNEKIIDCHRLLDNLQALFQLRAQEKQLLLKVERSPEVPEWIKTDGGKLRQVLINLL 287 + L + + L++ + +F A+ K L L P+ P I D +LRQ+L NL+ Sbjct: 843 KLVLETQAFELRPLIETVLEMFGPIARAKHLELTYGIDPQTPARILGDQVRLRQILSNLI 902 Query: 288 ANAIKFTAQGGVTLKVKCLTAPQTDEGQGASIWLH---------FLVSDTGPGIAAHEMD 338 NA+KFT +G V L VK D + L+ F + DTG GI D Sbjct: 903 GNALKFTEKGEVVLTVK---GEPFDPAESYHTILNLPHPSHRICFNLRDTGIGIPLDRQD 959 Query: 339 ELFVPFAQTETG-LKSCQGNGLGLPISQKFVQLMGGQIQVRSKVDQGSAFFFAIPVQVMA 397 LF F+Q ++ + G GLGL ISQ+ Q+MGG + V S+ GS F F I + Sbjct: 960 RLFKSFSQVDSSTTRKYGGTGLGLVISQRLTQMMGGVLTVTSEPGVGSNFRFCI-LTTAQ 1018 Query: 398 APKPTPETSAVTLPPLDQYNQKVLVVDDRPEXXXXXXXXXXXXGFVVQEAENGEMAIALW 457 AP S + ++VL+VDD G V +GE A+ W Sbjct: 1019 APALAEADSVQQMK-----GKQVLIVDDNETNRRILQDQCQAWGLVCHCFTSGESALD-W 1072 Query: 458 ESWHPQV--ILMDMQMPVLDGRSTTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCD 515 + P + ++D+QMP +DG + ++ QG+ II L++ G A+ LS Sbjct: 1073 FARCPDLDAAILDLQMPNMDGITLAHHLRQFAQGKDLPIILLSSGLVAG--ADELSV-FQ 1129 Query: 516 DFLSKPFR 523 L+KP R Sbjct: 1130 TVLNKPVR 1137 Score = 66.2 bits (160), Expect = 3e-13 Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 5/142 (3%) Query: 404 ETSAVTLPPLDQYNQKVLVVDDRPEXXXXXXXXXXXXGFVVQEAENGEMAIALWESWHPQ 463 E +A +L P Q +L+ +D G+ V A NG+ I E Sbjct: 1180 EDNATSLQPALQ----ILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYD 1235 Query: 464 VILMDMQMPVLDGRSTTQKIKAS-PQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPF 522 ++LMDMQMPV+DG + + I+ + P + I+A+TA+A G+R E L AG D ++SKP Sbjct: 1236 LVLMDMQMPVMDGITACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPI 1295 Query: 523 RPEELIALLAKHLAVALPSQGQ 544 +L +L A+ Q + Sbjct: 1296 SINQLRKVLQDTSALITSPQAR 1317 >SYNE-PCC-01-000295 sll0474 Length = 806 Score = 165 bits (418), Expect = 3e-43 Identities = 106/267 (39%), Positives = 147/267 (55%), Gaps = 6/267 (2%) Query: 130 KLVGQFLAIAQARHQAETTLTQXXXXXXXXXXXKTEFLASISHELRTPLNAIIGFSQLLH 189 K++G I + + +AE L K EFLA++SHELRTPLN+I+G + L Sbjct: 386 KIIGTIADITEIK-KAEEQLKLSNKILAKATQLKDEFLANMSHELRTPLNSILGMIETLQ 444 Query: 190 RD---PSLAPHRPTLDIINRSGEHLLELINDILEMSKIEAGRTTLNEKIIDCHRLLDNLQ 246 P +L+I+ SG HLL LINDIL++SKIEAGR L+ L+++ Sbjct: 445 NQVYGPLNGKQVQSLEIVENSGRHLLSLINDILDLSKIEAGRMDLDLNPTSVSALVNHSL 504 Query: 247 ALFQLRAQEKQLLLKVERSPEVPEWIKTDGGKLRQVLINLLANAIKFTAQGGVTLKVKCL 306 Q A +KQ+ L E P +P+ + D +L QVLINLL NAIKFT +GG + L Sbjct: 505 TFVQQFAIQKQINLSSEIIPNLPD-VLVDKRRLCQVLINLLNNAIKFTPEGGKVVVQADL 563 Query: 307 TAPQTDEGQGASIWLHFLVSDTGPGIAAHEMDELFVPFAQTETGL-KSCQGNGLGLPISQ 365 Q E + L F V DTG GI A ++ +F PF Q ++ L + G GLGL + + Sbjct: 564 IKEQGKENSQSPPQLSFTVFDTGIGIEADRLNNIFEPFVQIDSALNRRYDGTGLGLSLVK 623 Query: 366 KFVQLMGGQIQVRSKVDQGSAFFFAIP 392 K V+L GG + V SK+++GS F IP Sbjct: 624 KIVELHGGSVTVTSKLNEGSRFKITIP 650 >SYNE-PCC-01-000891 sll1353 Length = 998 Score = 156 bits (394), Expect = 2e-40 Identities = 93/255 (36%), Positives = 149/255 (58%), Gaps = 4/255 (1%) Query: 140 QARHQAETTLTQXXXXXXXXXXXKTEFLASISHELRTPLNAIIGFSQLL-HRDPSLAPHR 198 + R + E L + K+EFLA+ISHE+RTP+NAI+GF LL +D SL+ + Sbjct: 577 EERQRIEIKLREAKESAELANRVKSEFLANISHEIRTPMNAILGFCDLLLQKDLSLSQTK 636 Query: 199 PTLDIINRSGEHLLELINDILEMSKIEAGRTTLNEKIIDCHRLLDNLQALFQLRAQEKQL 258 L+ I S + LL LI+DIL++SKIEAG+ ++ + +D ++ ++ +F +A+ K L Sbjct: 637 KYLNAIGSSSKILLALIDDILDISKIEAGKLVIHLEPVDLRVIIREIKQIFDYKAESKSL 696 Query: 259 LLKVERSPEVPEWIKTDGGKLRQVLINLLANAIKFTAQGGVTLKVKCLTAPQTDEGQGAS 318 LL ++ + + I D +LRQ+L NL+ NA+KFT +G V + + + Q QG Sbjct: 697 LLTIQIDETLNQAIYFDAVRLRQILFNLVGNALKFTEEGQVFIYIG-VEGIQV-RSQGTY 754 Query: 319 IWLHFLVSDTGPGIAAHEMDELFVPFAQTE-TGLKSCQGNGLGLPISQKFVQLMGGQIQV 377 I L V+DTG GIA + ++F F Q++ + G GLGL I+++ L+GG+I + Sbjct: 755 ISLAIEVTDTGIGIAPEDQAKIFDVFTQSQGQSTRKYGGTGLGLTITRRLTALLGGEISL 814 Query: 378 RSKVDQGSAFFFAIP 392 S++ +GS F P Sbjct: 815 SSRLGEGSTFILHFP 829 >SYNE-PCC-01-001294 sll1888 Length = 432 Score = 152 bits (383), Expect = 4e-39 Identities = 116/376 (30%), Positives = 180/376 (47%), Gaps = 19/376 (5%) Query: 4 AIEQLGLLFGCQRVHVIYHDPAKDCLHMAEEWCAVGIAPRLSTFQGVPVATYPWLWANLQ 63 A++ +G G R ++ D L + E+C P ++ F + V +W L Sbjct: 49 AVDSIGSTLGVSRCLLLTKDFQSRHLQIEAEFCQ----PTVTAFAALIVPEESEIWRQL- 103 Query: 64 DSEGVLVRDVEQMPPEAEMDKVSLQFDLVKSILVVPMVKDAQVLGYISMVHLHDNYG-WN 122 EQ P + V Q + + + + P + Q GY+ + + G W+ Sbjct: 104 ---------FEQHQP-ITLYNVQFQGEDLGGLWIFPTLYQDQANGYLCLQQVGPAPGPWH 153 Query: 123 PEELNLAKLVGQFLAIAQARHQAETTLTQXXXXXXXXXXXKTEFLASISHELRTPLNAII 182 PE L + + + A A LTQ K+EFLAS +HELRTPLN II Sbjct: 154 PETEALLQELAEQTGTAIAHATLYQELTQATKAAEEASRLKSEFLASTTHELRTPLNGII 213 Query: 183 GFSQLLHRD--PSLAPHRPTLDIINRSGEHLLELINDILEMSKIEAGRTTLNEKIIDCHR 240 GF +L+ D S A ++ +S LL LINDIL+++KIEAGR + +++D Sbjct: 214 GFLRLILDDMADSEAEKHEFVEEAYQSALLLLNLINDILDLAKIEAGRVGIELEVVDFSE 273 Query: 241 LLDNLQALFQLRAQEKQLLLKVERSPEVPEWIKTDGGKLRQVLINLLANAIKFTAQGGVT 300 +L + +AQ K L + + P + + L QV++N++ NAIKFT +GG+T Sbjct: 274 VLQATENFALPQAQNKGLSFNLTAPNQGPLLVYGNQRWLLQVMLNIVGNAIKFTHEGGIT 333 Query: 301 LKVKCLTAPQTDEGQGASIWLHFLVSDTGPGIAAHEMDELFVPFAQTE-TGLKSCQGNGL 359 + V+ + EG L V DTG G++ + +LF F Q + + K+ G GL Sbjct: 334 VAVEVMPRTVLWEGVQKPGLLKVSVGDTGIGVSLEQQSKLFKKFVQIDGSHSKAYGGTGL 393 Query: 360 GLPISQKFVQLMGGQI 375 GL ISQK V+ MGG++ Sbjct: 394 GLVISQKLVETMGGKV 409 >SYNE-PCC-01-001280 sll1871 Length = 674 Score = 148 bits (373), Expect = 6e-38 Identities = 95/234 (40%), Positives = 135/234 (57%), Gaps = 12/234 (5%) Query: 163 KTEFLASISHELRTPLNAIIGFSQLLHRDPSLAPHR---PTLDIINRSGEHLLELINDIL 219 K+ FLA++SHELRTPLNAIIG+S++L + P LD I RSG+ LL LIND+L Sbjct: 438 KSIFLANMSHELRTPLNAIIGYSEMLIEEAEDLDSEELVPDLDKILRSGKSLLALINDLL 497 Query: 220 EMSKIEAGRTTLNEKIIDCHRLLDNLQALFQLRAQEKQLLLKVERSPEVPEWIKTDGGKL 279 ++SKIEAG+ L + + L+ + + L+VE S E E + D KL Sbjct: 498 DISKIEAGKMELYLETFNLKELIAGILDTISPLLKNNNNKLEVEISLESEE-VYGDLIKL 556 Query: 280 RQVLINLLANAIKFTAQGGVTLKVKCLTAPQTDEGQGASIWLHFLVSDTGPGIAAHEMDE 339 RQ ++NLL+NA KFT G ++ V+ + D WL F V DTG G+ +M + Sbjct: 557 RQGILNLLSNASKFTKDGIISFIVEEFKVDEKD-------WLSFQVKDTGIGLTEEQMSK 609 Query: 340 LFVPFAQTETG-LKSCQGNGLGLPISQKFVQLMGGQIQVRSKVDQGSAFFFAIP 392 LF PF Q ++ + G GLGL I++KF Q+MGG I + S++ GS+F +P Sbjct: 610 LFQPFTQADSSTTRKYGGTGLGLAITRKFCQMMGGDIYLTSEIGVGSSFTIKLP 663 >SYNE-PCC-01-002778 slr1969 Length = 750 Score = 140 bits (352), Expect = 2e-35 Identities = 133/488 (27%), Positives = 211/488 (43%), Gaps = 42/488 (8%) Query: 68 VLVRDVEQMPPEAEMDKVSLQFDLVKSILVVPMVKDAQVLGYISMVHLHDNYGWNPEELN 127 V V D+E + LQ V++ LV P++ + Q+ G + H W E N Sbjct: 266 VAVSDIENHYSSSYCLVGLLQRYQVRAKLVAPIIVEGQLWGLLIAHQCHHPRQWLDSEKN 325 Query: 128 LAKLVGQFLAIAQARH------------------QAETTLTQXXXXXXXXXXXKTEFLAS 169 +G+ LA+A + + L K++F+ + Sbjct: 326 FLGQIGEHLAVAIVQSLLYSEVQKQKNNFEKRVIERTKELRDTLMAAQAANLLKSQFINN 385 Query: 170 ISHELRTPLNAIIGFSQLLHR----DPSLAPHRPTLDIIN--RSGEHLLELINDILEMSK 223 ISHELRTPL +IIG S L R SL P + ++N +G+ LL+ IN I+++S+ Sbjct: 386 ISHELRTPLTSIIGLSATLLRWFDHPASLPPAKQQYYLLNIQENGKKLLDQINSIIQLSQ 445 Query: 224 IEAGRTTLNEKIIDCHRLLDNLQALFQLRAQEKQLLLKVERSPEV-PEWIKTDGGKLRQV 282 +E+G+T LN + H L + A ++Q+ L+++ V + D +L Q+ Sbjct: 446 LESGQTALNCQSFSLHTLAQTVIHSLLGVAIKQQINLELDYQINVGQDQFCADQERLDQI 505 Query: 283 LINLLANAIKFT-AQGGVTLKVKCLTAPQTDEGQGASIWLHFLVSDTGPGIAAHEMDELF 341 L LL NA+KFT A+G V L++ + Q F V DTG GI ++ LF Sbjct: 506 LTQLLNNALKFTPAEGTVILRI------WKESNQAI-----FQVEDTGIGINEQQLPVLF 554 Query: 342 VPFAQTETGLKS-CQGNGLGLPISQKFVQLMGGQIQVRSKVDQGSAFFFAIPVQVMAAPK 400 F S + G+GL ++++ V+L GG I+V S QG+ F IP Q P Sbjct: 555 EAFKVAGDSYTSFYETGGVGLALTKQLVELHGGYIEVESSPGQGTIFTTVIPQQNF--PP 612 Query: 401 PTPETSAVTLPPLDQYNQKVLVVDDRPEXXXXXXXXXXXXGFVVQEAENGEMAIALWESW 460 T L +N V+V++ E + V + A+ E Sbjct: 613 TTKGQVQDKLDAAMPFNSSVIVIEQDEEIATLICELLTVANYQVIWLIDTTNALQQVELL 672 Query: 461 HPQVILMDMQMPVLDGRSTTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSK 520 P +I++D +D T+ IK S + + L+ S E + G DD+L K Sbjct: 673 QPGLIIVDGDF--VDVTEVTRGIKKSRRISKVTVFLLSESLSSAEWQALSQKGIDDYLLK 730 Query: 521 PFRPEELI 528 P +PE L+ Sbjct: 731 PLQPELLL 738 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 133 bits (334), Expect = 2e-33 Identities = 98/290 (33%), Positives = 143/290 (49%), Gaps = 27/290 (9%) Query: 124 EELNLAKLVGQFLAIAQARHQAETTLTQXXXXXXXXXXXKTEFLASISHELRTPLNAIIG 183 + L + + + Q LA A TT + K+EFLA++SHE+RTP+NAIIG Sbjct: 288 QSLEMERRMRQQLAEQNQELVAATTAAEAANRS------KSEFLATMSHEIRTPMNAIIG 341 Query: 184 FSQLLHRDPSLAPHRPTLDIINRSGEHLLELINDILEMSKIEAGRTTLNEKIIDCHRLLD 243 + LL + I SGE LL LINDIL+ SKIEAG+ L D + L+ Sbjct: 342 MTGLLLDTDLTTQQKYFAQTIRNSGETLLTLINDILDFSKIEAGKLDLEVYPFDLGQCLE 401 Query: 244 NLQALFQLRAQEKQLLLKVERSPEVPEWIKTDGGKLRQVLINLLANAIKFTAQGGVTLKV 303 + A++K L L +P ++ D +LRQ+L+NLL+NA+KFT G V + V Sbjct: 402 EALDVVVPSARQKSLTLIRRFLTPIPPNLQGDVTRLRQILVNLLSNAVKFTEAGQVKVTV 461 Query: 304 KCLTAPQTDEGQGASIWLHFLVSDTGPGIAAHEMDELFVPFAQTETGL-KSCQGNGLGLP 362 + + D +G + F V DTG GIA ++ LF F+Q + + + G GLGL Sbjct: 462 EVV---DHDAAKG-EYQICFAVQDTGIGIAPNQQQALFQAFSQGNSSITRRFGGTGLGLA 517 Query: 363 ISQKFVQLMGGQI----------------QVRSKVDQGSAFFFAIPVQVM 396 I + LMGG I Q+ +GS F+F + + V+ Sbjct: 518 ICVRLTALMGGTIWAESNGCVVGNPPELWQIGQPTIEGSTFYFTVNLTVL 567 Score = 69.3 bits (168), Expect = 3e-14 Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 4/174 (2%) Query: 374 QIQVRSKVDQGSAFFFAIPVQVMAAPKPTPETSAVTLP--PLDQYNQKVLVVDDRPEXXX 431 Q ++S ++ + V P T A++ P P N +L+ +D Sbjct: 694 QAWIKSPINPDELENTLVDVLGQTEPPTLVSTEAISGPLFPYSSSNLTILLAEDNLINQQ 753 Query: 432 XXXXXXXXXGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRSTTQKIKASP-QGQ 490 G+ V NG+ A++ V+LMD++MP +DG + T+ I+ S + + Sbjct: 754 VAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTATEHIRRSQGRSE 813 Query: 491 HTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIALLAKHLAVALPSQGQ 544 IIA+TA + EG+R L++G +D++SKP R E L L + A AL S Q Sbjct: 814 RPWIIAVTAYSMEGDRERCLASGMNDYVSKPIRLEALQQAL-QVAATALQSTSQ 866 Score = 65.5 bits (158), Expect = 5e-13 Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 3/128 (2%) Query: 411 PPLDQYNQK---VLVVDDRPEXXXXXXXXXXXXGFVVQEAENGEMAIALWESWHPQVILM 467 PP+ + + +LVVDD E G+ +G A+ P +IL+ Sbjct: 8 PPIATFEPESFLILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQPDLILL 67 Query: 468 DMQMPVLDGRSTTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEEL 527 D+ MP +DG ++K PQ + +I LTAS + + + + G D+++KPF P EL Sbjct: 68 DLMMPGMDGLEVCDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPEL 127 Query: 528 IALLAKHL 535 +A + HL Sbjct: 128 LARVKTHL 135 >SYNE-PCC-01-001509 slr0210 Length = 417 Score = 132 bits (333), Expect = 2e-33 Identities = 105/302 (34%), Positives = 152/302 (50%), Gaps = 21/302 (6%) Query: 98 VPMVKDAQVLGYISMVHLHDNYGWNPEELNLAKLVGQFLAIAQARHQAETTLTQXXXXXX 157 +P+ + Q +G I +V H W E+ + VG Q ++ET Q Sbjct: 124 LPVFQQNQYVGGICLVWPHSQ--WRLEQYLFLQEVGNVFTY-QYHGESETISPQKSFNGG 180 Query: 158 XXXXXKTEFLASISHELRTPLNAIIGFSQLLHRD--PSLAP--HRPTLDIINRSGEHLLE 213 T L+ I HE RTPL AIIGF+++L + L P H+ +N S EHLL Sbjct: 181 DRHTSMTINLSHIHHEFRTPLTAIIGFARMLRDELYGKLNPKQHQYVQGTLN-SAEHLLS 239 Query: 214 LINDILEMSKIEAGRTTLNEKIIDCHRLLDNLQALFQLRAQEKQLLLKVERSPEVPEWIK 273 L+ND L++SKI+A L + + L + ++ Q +A+EKQL L + V ++ Sbjct: 240 LVNDFLDLSKIDARCEELFYEQVAVEDLCLAVISMVQTKAKEKQLALNLTIDDGV-DFCY 298 Query: 274 TDGGKLRQVLINLLANAIKFTAQGGVTLKVKCLTAPQTDEGQGASIWLHFLVSDTGPGIA 333 D + +Q+LINLL+N +KFT +G VTL VK TD+ L F V DTG GI Sbjct: 299 VDQRRWKQILINLLSNGVKFTPKGSVTLAVKA-----TDKA------LIFSVIDTGIGID 347 Query: 334 AHEMDELFVPFAQTETGLKSCQ-GNGLGLPISQKFVQLMGGQIQVRSKVDQGSAFFFAIP 392 + +LF PF Q + G GLGL +S++ QL GG IQ+ S GS F +P Sbjct: 348 PEDQRDLFQPFKQISHPPSFAEKGTGLGLALSRRLAQLHGGDIQLTSTPGVGSCFSAILP 407 Query: 393 VQ 394 ++ Sbjct: 408 LK 409 >SYNE-PCC-01-001517 slr0222 Length = 1178 Score = 94.4 bits (233), Expect = 1e-21 Identities = 73/236 (30%), Positives = 118/236 (50%), Gaps = 19/236 (8%) Query: 163 KTEFLASISHELRTPLNAIIGFSQLLHR---DPSLAPHRPTLDIINRSGEHLLELINDIL 219 K++F+ +SHE RTPL +IIGF +LL + S + ++ I S + L +LI+D+L Sbjct: 940 KSQFVDIVSHEFRTPLTSIIGFGELLSKYFDRLSTEKKQQYINNIQNSSQRLKQLIDDVL 999 Query: 220 EMSKIEAGRTTLNEKIIDCHRLLDNLQALFQL-RAQEKQLLLKVERSPEVPEWIKTDGGK 278 +S+ +A + + I+ L ++L F E L P+ E D Sbjct: 1000 SISRYDANKIEIELGNINLRNLANDLIENFSCGLGSEHNFELNYHLKPD--EHSLVDVRL 1057 Query: 279 LRQVLINLLANAIKFTAQGG-VTLKVKCLTAPQTDEGQGASIWLHFLVSDTGPGIAAHEM 337 LR +L N+L+NAIK++A G +TL + DE L F V D G GI + Sbjct: 1058 LRHILENILSNAIKYSAPGSTITLDI------SKDEEH-----LLFQVRDEGIGIPLQDQ 1106 Query: 338 DELFVPFAQTETGLKSCQGNGLGLPISQKFVQLMGGQIQVRSKVDQGSAFFFAIPV 393 ++LF F + + + G GLGL I +++V+ GG I+V S +G+ +P+ Sbjct: 1107 EKLFEAFHRA-SNVGDIPGTGLGLSIVKRYVEFQGGTIEVISMPGKGTTMVIKLPL 1161 Score = 41.2 bits (95), Expect = 1e-05 Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 1/104 (0%) Query: 419 KVLVVDDRPEXXXXXXXXXXXXGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRS 478 KVL+VDD+ E + A +G+ AIA + ++++ +M LDG + Sbjct: 8 KVLLVDDQRENLVALSRALDSLPVEIITANSGQEAIATAATTEFALMILAQEMSELDGLN 67 Query: 479 TTQKIKASPQGQHTIIIALT-ASAFEGERAEILSAGCDDFLSKP 521 T + +++ P + T II L AEI G DFL++P Sbjct: 68 TAKILRSFPLAEQTPIIFLARQEIITKAMAEINILGLVDFLAQP 111 >SYNE-PCC-01-000985 sll1475 Length = 297 Score = 93.6 bits (231), Expect = 2e-21 Identities = 66/227 (29%), Positives = 120/227 (52%), Gaps = 17/227 (7%) Query: 163 KTEFLASISHELRTPLNAIIGFSQLLHRDPS--LAPHRPTLDI--INRSGEHLLELINDI 218 KT F + SHE RTPL+ + +QLL L P + + ++ I S +++++L++DI Sbjct: 69 KTRFFSMASHEFRTPLSTALAAAQLLENSEVAWLDPDKRSRNLHRIQNSVKNMVQLLDDI 128 Query: 219 LEMSKIEAGRTTLNEKIIDCHRLLDNLQALFQLRAQEKQLLLKVERSPEVPEWIKTDGGK 278 L +++ EAG+ N +D L QL ++ + + + + D Sbjct: 129 LIINRAEAGKLEFNPNWLDLKLLFQQFIEEIQLSVSDQYYFDFICSAQDTKALV--DERL 186 Query: 279 LRQVLINLLANAIKFTAQGGVTLKVKCLTAPQTDEGQGASIWLHFLVSDTGPGIAAHEMD 338 +R +L NLL+NAIK++ GG ++K + +++ + F V+D G GI+ + Sbjct: 187 VRSILSNLLSNAIKYSPGGG---QIKIALSLDSEQ-------IIFEVTDQGIGISPEDQK 236 Query: 339 ELFVPFAQTETGLKSCQGNGLGLPISQKFVQLMGGQIQVRSKVDQGS 385 ++F PF + + +++ G GLGL +++K V L G I ++S VDQG+ Sbjct: 237 QIFEPFHRGKN-VRNITGTGLGLMVAKKCVDLHSGSILLKSAVDQGT 282 >SYNE-PCC-01-001690 slr0473 Length = 748 Score = 85.5 bits (210), Expect = 4e-19 Identities = 74/232 (31%), Positives = 111/232 (47%), Gaps = 19/232 (8%) Query: 165 EFLASISHELRTPLNAIIGFSQLLHRDPSLAPHRPTLDIINRS--GEHLLE-LINDILEM 221 +F SH+L+ PLN + + QLL S A D I+ + G L++ LI+DIL Sbjct: 531 KFAYIASHDLQEPLNQVSNYVQLLEMRYSEALDEDAKDFIDFAVTGVSLMQTLIDDILTY 590 Query: 222 SKIEAGRTTLNEKIIDCHRLLDNLQALFQLRAQEKQLLLKVERSPEVPEWIKTDGGKLRQ 281 +K++ L D ++D A + R +E ++V P V D +L Q Sbjct: 591 AKVDTQYAQLT--FTDVQEVVDKALANLKQRIEESGAEIEVGSMPAV----MADQIQLMQ 644 Query: 282 VLINLLANAIKFTAQGGVTLKVKCLTAPQTDEGQGASIWLHFLVSDTGPGIAAHEMDELF 341 V NL+AN IKF G + K+K Q D W+ F V D G GI + +F Sbjct: 645 VFQNLIANGIKFA--GDKSPKIKIWGDRQEDA------WV-FAVQDNGIGIDPQFFERIF 695 Query: 342 VPFAQTETGLKSCQGNGLGLPISQKFVQLMGGQIQVRSKVDQGSAFFFAIPV 393 V F + T +G G+GL I +K ++ GQI + S +GS F+F+IP+ Sbjct: 696 VIFQRLHTR-DEYKGTGMGLAICKKIIEGHQGQIWLESNPGEGSTFYFSIPI 746 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 85.1 bits (209), Expect = 6e-19 Identities = 44/110 (40%), Positives = 64/110 (58%) Query: 419 KVLVVDDRPEXXXXXXXXXXXXGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRS 478 KVL+V+D G+ V A +GE A+ + S PQ+ILMDM +P++DG + Sbjct: 6 KVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGWT 65 Query: 479 TTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELI 528 T++IK P G H IIALTA A +R ++AGCDD+ +KP + L+ Sbjct: 66 ATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLL 115 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 69.7 bits (169), Expect = 3e-14 Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 1/126 (0%) Query: 420 VLVVDDRPEXXXXXXXXXXXXGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRST 479 +L+V+D E F +GE + +++ P +I++D+ +P LDG Sbjct: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLEV 73 Query: 480 TQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIALLAKHLAVAL 539 +I+ P + I+ LTA E +R LS G DD+L KPF P EL+A + L L Sbjct: 74 CTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRALLRRQL 133 Query: 540 PSQGQP 545 QGQP Sbjct: 134 -RQGQP 138 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 66.2 bits (160), Expect = 3e-13 Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 1/118 (0%) Query: 420 VLVVDDRPEXXXXXXXXXXXXG-FVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRS 478 +L+VDD P G F V A N A + P +++ D+ MP +DG Sbjct: 58 LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGYQ 117 Query: 479 TTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIALLAKHLA 536 QK++ + Q ++ LTA G+R + GCD FLSKPF P+EL A++ LA Sbjct: 118 FLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLA 175 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 64.3 bits (155), Expect = 1e-12 Identities = 35/113 (30%), Positives = 58/113 (51%) Query: 417 NQKVLVVDDRPEXXXXXXXXXXXXGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDG 476 N +L+VDD P G+ V A NG A+ L + P +I+ D+ MP +DG Sbjct: 7 NYHLLLVDDDPNLLLLVKDYLEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDG 66 Query: 477 RSTTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIA 529 + ++++ +P ++ L+A R + L+ G D +++KPF PEEL A Sbjct: 67 YAFIEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAA 119 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 63.5 bits (153), Expect = 2e-12 Identities = 33/116 (28%), Positives = 60/116 (51%) Query: 414 DQYNQKVLVVDDRPEXXXXXXXXXXXXGFVVQEAENGEMAIALWESWHPQVILMDMQMPV 473 D+ +L+VDD P G+ V+ +G+MA+ + P +IL+D++MP Sbjct: 5 DEKKGNILLVDDLPNNLQLLSDLLINLGYTVRSVTSGKMALRTLQVKRPDLILLDIKMPD 64 Query: 474 LDGRSTTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIA 529 +DG + IK + Q II ++A ++ + G D+++KPF+ EE++A Sbjct: 65 MDGYQVCEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQIEEVVA 120 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 63.2 bits (152), Expect = 2e-12 Identities = 31/111 (27%), Positives = 59/111 (53%) Query: 419 KVLVVDDRPEXXXXXXXXXXXXGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRS 478 ++L++DD P G+ VQ+A +G AL P +I++D+ +P +DG + Sbjct: 3 RILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFT 62 Query: 479 TTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIA 529 Q+++ + ++ LTA ++ + +G DD+L+KPF EE++A Sbjct: 63 VCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLA 113 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 59.3 bits (142), Expect = 3e-11 Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 6/148 (4%) Query: 422 VVDDRPEXXXXXXXXXXXXGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRSTTQ 481 +VDD G+ V A +GE AIA + P ++++D+ MP LDG Q Sbjct: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 Query: 482 KIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIALLAKHLAVALPS 541 +++ + II LTA +R L G DD++ KPF P+EL A + L + Sbjct: 61 ELR---KESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLR-RVDK 116 Query: 542 QGQP--PASPLRPFPVITAPSLSEQLAK 567 G P P+S + I + Q+ K Sbjct: 117 NGMPGIPSSGVLQIATIRIDTNKRQVYK 144 >SYNE-PCC-01-001575 slr0312 Length = 209 Score = 55.1 bits (131), Expect = 6e-10 Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 11/138 (7%) Query: 443 VVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRSTTQKIKASPQGQHTIIIALTASAF 502 V+ +AENGE AIAL+E P V LMD++MP ++G + I A + II LT Sbjct: 34 VIAQAENGEQAIALFEEHQPDVTLMDLRMPEVEGVAAISAICAIV--KFARIIVLTTYDS 91 Query: 503 EGERAEILSAGCDDFLSKPFRPEELIALLAKHLAVALPSQGQ---PPASPLRPFPVITAP 559 + + L AG +L K P+EL+ A+ +GQ PP + ++ P Sbjct: 92 DEDIYRGLQAGAKGYLLKETEPDELLN------AIRTVHRGQKYIPPDVGAKLVQRLSNP 145 Query: 560 SLSEQLAKTPQSWRQKMA 577 LSE+ + S Q M+ Sbjct: 146 ELSERELEVLGSLAQGMS 163 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 54.7 bits (130), Expect = 8e-10 Identities = 29/116 (25%), Positives = 62/116 (53%) Query: 420 VLVVDDRPEXXXXXXXXXXXXGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRST 479 VL+V+D G+ V A +G A+ +++ P ++++D+ MP ++G Sbjct: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 Query: 480 TQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIALLAKHL 535 ++IK+ P+ ++ +I ++ E +R + G D +++KPF+P EL+ + + L Sbjct: 90 CRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLL 145 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 54.7 bits (130), Expect = 8e-10 Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 6/112 (5%) Query: 419 KVLVVDDRPEXXXXXXXXXXXXGFVVQEAENGEMAIA-LWESWHPQVILMDMQMPVLDGR 477 K+L+VDD E GF V+ A NG A+ L ES+ +++L+D+ MP L+G Sbjct: 3 KLLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKLNESY--KLVLLDVMMPKLNGI 60 Query: 478 STTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIA 529 T ++I+ + + ++ LTA + +R L G DD L KPF ELIA Sbjct: 61 ETLKEIR---KVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIA 109 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 54.3 bits (129), Expect = 1e-09 Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 2/111 (1%) Query: 420 VLVVDDRPEXXXXXXXXXXXXGFVVQEAENGEMAIALWESWH--PQVILMDMQMPVLDGR 477 +LVV+D + + EAENG +A+ L S P +I+ D+ MP +DG Sbjct: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 Query: 478 STTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELI 528 ++ + + I LTA + + +++G DD+L KPF+ E+L+ Sbjct: 64 GLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLL 114 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 53.9 bits (128), Expect = 1e-09 Identities = 32/110 (29%), Positives = 51/110 (46%) Query: 412 PLDQYNQKVLVVDDRPEXXXXXXXXXXXXGFVVQEAENGEMAIALWESWHPQVILMDMQM 471 P++ K+LVVDD G V+ A NGE A+ + P+V+L+D M Sbjct: 6 PIETAAAKILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVM 65 Query: 472 PVLDGRSTTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKP 521 PV+DG + Q + Q +++ +T E AG D+++KP Sbjct: 66 PVMDGFACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKP 115 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 52.8 bits (125), Expect = 3e-09 Identities = 35/145 (24%), Positives = 70/145 (48%), Gaps = 15/145 (10%) Query: 392 PVQVMAAPKPTPETSAVTLPPLDQYNQKVLVVDDRPEXXXXXXXXXXXXGFVVQEAENGE 451 P+ + AP + + + PP + ++LVV+D G+ V ++G Sbjct: 11 PMATLEAPPHSLQHQEI--PP----SHRILVVEDEVSIRETIVLSLQEEGYEVYAVDDGR 64 Query: 452 MAIALWESWHPQ-------VILMDMQMPVLDGRSTTQKIKASPQGQHTIIIALTASAFEG 504 A+AL + + +I++D+ +P ++G + ++ G +T I+ ++A E Sbjct: 65 DALALLQEFSEDPGQAAVDLIILDIMLPQVNGLDVCRSLRFG--GDNTPILIVSAKGSEM 122 Query: 505 ERAEILSAGCDDFLSKPFRPEELIA 529 E+ L G DD+++KPF +EL+A Sbjct: 123 EKVTGLEVGADDYITKPFSLKELVA 147 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 51.6 bits (122), Expect = 7e-09 Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 4/115 (3%) Query: 419 KVLVVDDRPEXXXXXXXXXXXXGFVVQEAENGEMAIA-LWESW-HPQVILMDMQMPVLDG 476 ++L+V+D P+ +VV ++G +A + L + W + + + D +P L G Sbjct: 2 RLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSG 61 Query: 477 RSTTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIALL 531 QK++ Q I+ LTA +R E L AG DD+L KPF EL+A L Sbjct: 62 LELCQKLRG--QRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAELLARL 114 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 51.6 bits (122), Expect = 7e-09 Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 1/112 (0%) Query: 418 QKVLVVDDRPEXXXXXXXXXXXXGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGR 477 +K+L+V+D + V EA + + AI + +P++IL+D +P G Sbjct: 3 RKILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKE-NPKLILLDWMLPGRSGI 61 Query: 478 STTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIA 529 Q IK II LTA + E + L+AG DD+++KPF P+ L+A Sbjct: 62 QFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLA 113 >SYNE-PCC-01-000608 sll0921 Length = 222 Score = 50.8 bits (120), Expect = 1e-08 Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 15/123 (12%) Query: 444 VQEAENGEMAIALWESWHPQVILMDMQMPVLDGRSTTQKIKASPQGQHTIIIALTASAFE 503 V EA NG + + + + P V+++D+ +P ++G TQ++K P ++ LT + E Sbjct: 32 VGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNGIDVTQQLKKGPLNCQCRVVILTLNDQE 91 Query: 504 GERAEILSAGCDDFLSKPFRPEELI-ALLAKH--------------LAVALPSQGQPPAS 548 SAG D + K R E LI A+ A H LA A ++ P+S Sbjct: 92 ETVLAAFSAGADAYCMKDSRTELLIEAIQATHGGFAWIDPAIARIVLAHAPGAEPSEPSS 151 Query: 549 PLR 551 P R Sbjct: 152 PSR 154 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 49.3 bits (116), Expect = 4e-08 Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 2/110 (1%) Query: 420 VLVVDDRPEXXXXXXXXXXXXGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRST 479 +L+VDD G + A+ G+ +A+ + ++++D +P + G Sbjct: 4 ILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGLEI 63 Query: 480 TQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIA 529 ++I+ G T ++ LTA +R L AG DD+L KPF EL+A Sbjct: 64 CRQIRIL--GHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFELRELLA 111 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 49.3 bits (116), Expect = 4e-08 Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 3/124 (2%) Query: 419 KVLVVDDRPEXXXXXXXXXXXXGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRS 478 K+LVV+D G+ V EAENG + + + +++MD+ +P +G Sbjct: 5 KILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGLL 64 Query: 479 TTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIALLAKHLAVA 538 ++++ + +I LT E ++ L G DD+L+KPF P EL L A Sbjct: 65 LARELR---EELSLPLIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHRA 121 Query: 539 LPSQ 542 +P Q Sbjct: 122 MPHQ 125 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 48.9 bits (115), Expect = 5e-08 Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 4/115 (3%) Query: 419 KVLVVDDRPEXXXXXXXXXXXXGFVVQEAENGEMAIALWES-WHPQVI-LMDMQMPVLDG 476 ++L+V+D + +VV +G A E+ W + ++D +P L G Sbjct: 2 RILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSG 61 Query: 477 RSTTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIALL 531 QK++ QG ++ LTA R E L AG DD+L+KPF EL+A L Sbjct: 62 LELCQKLRT--QGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAELLARL 114 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 47.8 bits (112), Expect = 1e-07 Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 2/113 (1%) Query: 419 KVLVVDDRPEXXXXXXXXXXXXGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRS 478 ++L+++D GF V +G+ +A S +++D+ +P LDG Sbjct: 2 RILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLE 61 Query: 479 TTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIALL 531 Q+ +++ Q +I LTA ER + L +G DD+L KPF E+ A L Sbjct: 62 VLQQWRSNHQDVPVLI--LTARDTLDERVKGLQSGADDYLCKPFALAEVAARL 112 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 47.4 bits (111), Expect = 1e-07 Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 2/119 (1%) Query: 417 NQKVLVVDDRPEXXXXXXXXXXXXGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDG 476 + +VLVV++ + G+ V A +G + + P +I+++ +P + G Sbjct: 2 SHRVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSG 61 Query: 477 RSTTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIALLAKHL 535 ++++ G II +TA ER L AG DD++ KPF +E A + L Sbjct: 62 LELCRRLRE--MGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQL 118 >SYNE-PCC-01-001160 sll1708 Length = 226 Score = 46.2 bits (108), Expect = 3e-07 Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 4/116 (3%) Query: 419 KVLVVDDRP--EXXXXXXXXXXXXGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDG 476 K+L+V+D P + ++ +NG A+ +P +I+MD+ +P LDG Sbjct: 18 KILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPGLDG 77 Query: 477 RSTTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIALLA 532 T++IK + H I+ LT+ E LS+G D + K E LI +A Sbjct: 78 IEATKQIKQTSPQIH--IVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIA 131 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.320 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,190 Number of Sequences: 78 Number of extensions: 2506 Number of successful extensions: 110 Number of sequences better than 1.0e-05: 37 Number of HSP's better than 0.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 15 Number of HSP's that attempted gapping in prelim test: 24 Number of HSP's gapped (non-prelim): 44 length of query: 633 length of database: 48,235 effective HSP length: 68 effective length of query: 565 effective length of database: 42,931 effective search space: 24256015 effective search space used: 24256015 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 95 (41.2 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-000877 sll1330 (250 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-000877 sll1330 498 e-143 SYNE-PCC-01-002033 slr0947 125 1e-31 SYNE-PCC-01-000414 sll0649 123 6e-31 SYNE-PCC-01-001461 slr0115 118 2e-29 SYNE-PCC-01-001437 slr0081 112 1e-27 SYNE-PCC-01-000242 sll0396 111 3e-27 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 108 2e-26 SYNE-PCC-01-002486 slr1584 105 2e-25 SYNE-PCC-01-002672 slr1837 99 2e-23 SYNE-PCC-01-000518 sll0789 93 9e-22 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 90 8e-21 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 89 1e-20 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 86 9e-20 SYNE-PCC-01-000523 sll0797 80 5e-18 SYNE-PCC-01-002731 slr1909 57 6e-11 SYNE-PCC-01-001133 sll1673 56 1e-10 SYNE-PCC-01-001306 sll1905 53 1e-09 SYNE-PCC-01-002618 slr1760 52 2e-09 SYNE-PCC-01-002086 slr1042 51 3e-09 SYNE-PCC-01-002635 slr1783 46 1e-07 SYNE-PCC-01-000800 sll1228 45 2e-07 SYNE-PCC-01-002489 slr1588 44 5e-07 SYNE-PCC-01-002873 slr2098 42 1e-06 SYNE-PCC-01-002788 slr1982 42 2e-06 SYNE-PCC-01-001132 sll1672 41 3e-06 >SYNE-PCC-01-000877 sll1330 Length = 250 Score = 498 bits (1281), Expect = e-143 Identities = 250/250 (100%), Positives = 250/250 (100%) Query: 1 MNPVYISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDG 60 MNPVYISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDG Sbjct: 1 MNPVYISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDG 60 Query: 61 DGIELCRWLYQQHQSMIFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRR 120 DGIELCRWLYQQHQSMIFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRR Sbjct: 61 DGIELCRWLYQQHQSMIFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRR 120 Query: 121 VRTVAAPLLLDYGVLKIDLVQRRVEYQGNFVDLTPQEFSLLYVLTQAEGSALSRTELLRR 180 VRTVAAPLLLDYGVLKIDLVQRRVEYQGNFVDLTPQEFSLLYVLTQAEGSALSRTELLRR Sbjct: 121 VRTVAAPLLLDYGVLKIDLVQRRVEYQGNFVDLTPQEFSLLYVLTQAEGSALSRTELLRR 180 Query: 181 AWPEAIDNPRTIDTHVLSLRKKIETDPRQPSLIQTVRNVGYRFNSSILEEKKVVAEKPVT 240 AWPEAIDNPRTIDTHVLSLRKKIETDPRQPSLIQTVRNVGYRFNSSILEEKKVVAEKPVT Sbjct: 181 AWPEAIDNPRTIDTHVLSLRKKIETDPRQPSLIQTVRNVGYRFNSSILEEKKVVAEKPVT 240 Query: 241 LSPAGVSVLT 250 LSPAGVSVLT Sbjct: 241 LSPAGVSVLT 250 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 125 bits (314), Expect = 1e-31 Identities = 79/224 (35%), Positives = 116/224 (51%), Gaps = 8/224 (3%) Query: 8 VVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGDGIELCR 67 +V+ +R +L L GY V + +A F+ P L V+D + DG +C+ Sbjct: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 Query: 68 WLYQQHQSMIFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRRVRTVAAP 127 L ++ I +L+A D + GL+ GADDY+ KPF +E ARI ++RRV P Sbjct: 61 ELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKNGMP 120 Query: 128 LLLDYGVLKIDLVQ----RRVEYQGN-FVDLTPQEFSLLYVLTQAEGSALSRTELLRRAW 182 + GVL+I ++ +R Y+G+ + LT EFSLL +L G SR+E+L+ W Sbjct: 121 GIPSSGVLQIATIRIDTNKRQVYKGDERIRLTGMEFSLLELLVSRSGEPFSRSEILQEVW 180 Query: 183 ---PEAIDNPRTIDTHVLSLRKKIETDPRQPSLIQTVRNVGYRF 223 PE + R +D H+ LR K+E DP P LI T R GY F Sbjct: 181 GYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGYLF 224 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 123 bits (308), Expect = 6e-31 Identities = 80/228 (35%), Positives = 121/228 (53%), Gaps = 10/228 (4%) Query: 6 ISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGDGIEL 65 I +VE + + L+ L++ + + + F Q+P L V+D L DG+E+ Sbjct: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLEV 73 Query: 66 CRWLYQQHQSM---IFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRRVR 122 C + QQ S I +L+AK E D + GL GADDYL KPF +E +AR+ L+RR Sbjct: 74 CTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRALLRRQL 133 Query: 123 TVAAPLLLDYGV--LKIDLVQRRV-EYQGN---FVDLTPQEFSLLYVLTQAEGSALSRTE 176 P+ Y ++DL Q + YQG+ ++LT EF+LL G +RT+ Sbjct: 134 RQGQPVGQIYRTNHFQVDLDQHQASRYQGDRQEELELTGLEFNLLATFMSYPGRVWNRTQ 193 Query: 177 LLRRAW-PEAIDNPRTIDTHVLSLRKKIETDPRQPSLIQTVRNVGYRF 223 L+ + W + + R +DTH+ LRKKIE DP P+ I+TV +GY+F Sbjct: 194 LIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGYKF 241 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 118 bits (295), Expect = 2e-29 Identities = 77/226 (34%), Positives = 121/226 (53%), Gaps = 12/226 (5%) Query: 6 ISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGDGIEL 65 I +++ +P + L+S +L+ +GY VQQ + + P L ++D L DG + Sbjct: 4 ILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFTV 63 Query: 66 CRWLYQQHQSM---IFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRRVR 122 C+ L + ++ + +L+A +D + G +GADDYLTKPF ++E LAR+ L+RR Sbjct: 64 CQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLRRTD 123 Query: 123 TVAAPL----LLDYGVLKIDLVQRRVE--YQGNFVDLTPQEFSLLYVLTQAEGSALSRTE 176 + +L+ G L LV R E + G + LT EF LL+ L Q G +S ++ Sbjct: 124 RIPQAAKHSEILNQGPL--TLVPERFEAIWFGKSIKLTHLEFELLHCLLQRHGQTVSPSD 181 Query: 177 LLRRAWP-EAIDNPRTIDTHVLSLRKKIETDPRQPSLIQTVRNVGY 221 +LR W E D+ TI H+ LR K+E +PR+P I+TV GY Sbjct: 182 ILREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTVYGAGY 227 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 112 bits (280), Expect = 1e-27 Identities = 80/231 (34%), Positives = 121/231 (52%), Gaps = 15/231 (6%) Query: 6 ISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQAR---QAFNNQ----LPTLAVIDSDLT 58 I VVE +R + LQ+ GY V A Q F+ L ++D L Sbjct: 33 ILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIMLP 92 Query: 59 DGDGIELCRWL-YQQHQSMIFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECL 117 +G+++CR L + + I I+SAK +E + V GL+ GADDY+TKPF ++E +AR + Sbjct: 93 QVNGLDVCRSLRFGGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARCRAM 152 Query: 118 IRRVRTVAAPLLLDYGVLKIDLV----QRRVEYQGNFVDLTPQEFSLLYVLTQAEGSALS 173 IRR + +A + + + DLV + RV +G V L P+EF LL + S Sbjct: 153 IRR-QGLAGNNIAPFRKFR-DLVLYPQECRVLMRGEEVSLAPKEFRLLELFMSYPRRVWS 210 Query: 174 RTELLRRAWP-EAIDNPRTIDTHVLSLRKKIETDPRQPSLIQTVRNVGYRF 223 R +L+ W + + + +T+D H+ LR+K+E DP QP + TVR GYRF Sbjct: 211 REQLIEHIWGIDFMGDSKTVDVHIRWLREKLEQDPSQPEYLVTVRGFGYRF 261 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 111 bits (277), Expect = 3e-27 Identities = 76/222 (34%), Positives = 114/222 (51%), Gaps = 12/222 (5%) Query: 6 ISVVEGNPHLRSLLSWHLQQSGYLVQQC----SGFHQARQAFNNQLPTLAVIDSDLTDGD 61 + VVE L + L+ GY V GF QA++ P L +++ L Sbjct: 5 VLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEF----PPDLIIVNGALPGMS 60 Query: 62 GIELCRWLYQQHQSM-IFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRR 120 G+ELCR L + + I +++AKD ++ V GL AGADDY+ KPF EF ARI +RR Sbjct: 61 GLELCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRR 120 Query: 121 VRTVAAPLLLDYGVLKIDLVQRRVEYQGNFVDLTPQEFSLLYVLTQAEGSALSRTELLRR 180 T + +L + L+ + R ++ +DLT +EF LL L L+R ++L R Sbjct: 121 THTTSDE-VLQFADLRFNRSTREIQRGDRLIDLTAKEFELLDYLLSHARQVLTREQILER 179 Query: 181 AWP-EAIDNPRTIDTHVLSLRKKIETDPRQPSLIQTVRNVGY 221 W + + + I+ ++ LR K+E +P LIQTVR VGY Sbjct: 180 VWGYDFMGDSNIIEVYIRYLRLKLEA-AGEPRLIQTVRGVGY 220 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 108 bits (270), Expect = 2e-26 Identities = 78/231 (33%), Positives = 121/231 (52%), Gaps = 9/231 (3%) Query: 6 ISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGDGIEL 65 I +VE +R +++ L Q Y V + S F A P L ++D L GI+ Sbjct: 5 ILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKEN-PKLILLDWMLPGRSGIQF 63 Query: 66 CRWLYQQHQSM---IFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRRVR 122 +++ +Q I +L+AK TE+D + L AGADDY+TKPF Q LARIE + RR+ Sbjct: 64 IQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWRRIY 123 Query: 123 TVAAPLLLDYGVLKIDLVQRRVEYQGNFVDLTPQEFSLLYVLTQAEGSALSRTELLRRAW 182 + + L ID +RV +Q ++L+ EF LL+ + SR +LL R W Sbjct: 124 EQQSQ-FIQIDELSIDENAQRVFFQQQEINLSSTEFKLLHFFMRHPEKVYSREQLLNRIW 182 Query: 183 PEAID-NPRTIDTHVLSLRKKIETDPRQ-PSLIQTVRNVGYRFNSSILEEK 231 ++ RT+D+++ LR+ + P Q IQTVR GYRF+S + +++ Sbjct: 183 HNDLEVEYRTVDSYIRRLRRNLA--PFQCEHYIQTVRGSGYRFSSYLRDKQ 231 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 105 bits (261), Expect = 2e-25 Identities = 64/190 (33%), Positives = 103/190 (54%), Gaps = 5/190 (2%) Query: 50 LAVIDSDLTDGDGIELC-RWLYQQHQSMIFILSAKDTEKDIVHGLKAGADDYLTKPFGMQ 108 L ++D L + DGI LC +W + I +++A+DT D + GL AGADDY+ KP + Sbjct: 47 LVILDVMLPELDGITLCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLG 106 Query: 109 EFLARIECLIRRVRTVAAPLLLDYGVLKIDLVQRRVEYQGNFVDLTPQEFSLLYVLTQAE 168 E AR+ L+RR P +L++G +++D V Y + LT +E+S+L +L + Sbjct: 107 ELFARVRALLRRGCATCQP-VLEWGPIRLDPSTYEVSYDNEVLSLTRKEYSILELLLRNG 165 Query: 169 GSALSRTELLRRAWP-EAIDNPRTIDTHVLSLRKKIETDPRQPSLIQTVRNVGYRFNSSI 227 LSR+ ++ W E+ T+ HV SLR+K+++ I+TV +GYR + Sbjct: 166 RRVLSRSMIIDSIWKLESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGYRLAN-- 223 Query: 228 LEEKKVVAEK 237 L EK + K Sbjct: 224 LTEKSLCQGK 233 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 98.6 bits (244), Expect = 2e-23 Identities = 67/188 (35%), Positives = 97/188 (51%), Gaps = 12/188 (6%) Query: 50 LAVIDSDLTDGDGIELCRWL-YQQHQSMIFILSAKDTEKDIVHGLKAGADDYLTKPFGMQ 108 L ++D L G+E+CR + H + + L+AKDT D V GL AG DDYL KPF ++ Sbjct: 48 LLILDWMLPQVSGLEICRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFELR 107 Query: 109 EFLARIECLIRRV---RTVAAPL------LLDYGVLKIDLVQRRVEYQGNFVDLTPQEFS 159 E LAR+ L+RR T+ L LL + +D+ + QG + L+ +E + Sbjct: 108 ELLARVRALLRRQSHGETITETLGAVKNNLLSVNNVSLDVANQVAYCQGQRIALSEKEVA 167 Query: 160 LLYVLTQAEGSALSRTELLRRAWP-EAIDNPRTIDTHVLSLRKKIETDPRQPSLIQTVRN 218 LL + QA G LS E+ WP E+ + + V LR+KIE P P LI +V Sbjct: 168 LLTLFLQAPGQILSHEEIYSHLWPGESPPSSNVLAALVRLLRRKIE-QPNAPRLINSVYG 226 Query: 219 VGYRFNSS 226 GY F ++ Sbjct: 227 KGYCFEAN 234 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 92.8 bits (229), Expect = 9e-22 Identities = 79/228 (34%), Positives = 109/228 (47%), Gaps = 21/228 (9%) Query: 8 VVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQA----RQAFNNQLPTLAVIDSDLTDGDGI 63 +VE P L L L++ Y+V + A Q + N TLA+ D + G+ Sbjct: 5 LVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNY--TLAIFDWMVPGLSGL 62 Query: 64 ELCRWLYQQHQSM-IFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRRVR 122 ELC+ L Q S+ I +L+AKD D V GL AGADDYL KPFGM E LAR+ L RR Sbjct: 63 ELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAELLARLRSLQRRSP 122 Query: 123 TVAAPLL------LDYGVLKIDLVQRRVEYQGNFVDLTPQEFSLLYVLTQAEGSALSRTE 176 + L LDYG + V + + LT +EF LL + LS + Sbjct: 123 ELQPQQLQVGQWWLDYGTFAV------VTPEQARITLTAKEFQLLEYFMKHPQQILSSEQ 176 Query: 177 LLRRAWP-EAIDNPRTIDTHVLSLRKKIETDPRQPSLIQTVRNVGYRF 223 + + W A + V LR+K+E + +LI+TV +GYRF Sbjct: 177 IKNQLWALSAESTSNVVAAQVRLLRRKLE-EYSHGNLIETVYGLGYRF 223 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 89.7 bits (221), Expect = 8e-21 Identities = 68/219 (31%), Positives = 110/219 (50%), Gaps = 10/219 (4%) Query: 6 ISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGDGIEL 65 I ++E + + + L L + G+ V + A + V+D L DG+E+ Sbjct: 3 ILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLEV 62 Query: 66 CRWLYQQHQSM-IFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRRVRTV 124 + HQ + + IL+A+DT + V GL++GADDYL KPF + E AR++ LIRR Sbjct: 63 LQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRRYGY 122 Query: 125 AAPLLLDYGVLKIDLVQRRVEYQGNFVDLTPQEFSLLYVLTQAEGSALSRTELLRR--AW 182 ++ GV K+D QR V + LT +E+ LL + + LSR+ + + +W Sbjct: 123 HHSVIEQAGV-KLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSRSSIEEKLSSW 181 Query: 183 PEAIDNPRTIDTHVLSLRKKIETDPRQPSLIQTVRNVGY 221 E I + +D H+ +LR+K+ I+TV VGY Sbjct: 182 DEEISS-GALDVHIYNLRQKL-----GKQFIRTVHGVGY 214 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 89.4 bits (220), Expect = 1e-20 Identities = 61/219 (27%), Positives = 113/219 (51%), Gaps = 6/219 (2%) Query: 8 VVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGDGIELCR 67 +V+ + L LLS L+ G+ V+ + +A Q N L ++D + +GIE + Sbjct: 6 LVDDDIELTELLSTLLELEGFDVETANNGLEALQKLNESYK-LVLLDVMMPKLNGIETLK 64 Query: 68 WLYQQHQSMIFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRR----VRT 123 + + + +L+A+ + D V GL+ GADD L KPF +E +ARI+ ++RR Sbjct: 65 EIRKVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRRSASPSNN 124 Query: 124 VAAPLLLDYGVLKIDLVQRRVEYQGNFVDLTPQEFSLLYVLTQAEGSALSRTELLRRAWP 183 ++ +L + + + Y ++LT EF +L +L +++G+ +SR EL Sbjct: 125 ISNVEILSFDGITLHFSHGIATYNEENLNLTDYEFKILCLLLKSKGNVVSREELSLEVME 184 Query: 184 EAIDN-PRTIDTHVLSLRKKIETDPRQPSLIQTVRNVGY 221 + + R++D H+ +LR+K+ +PS +T+R GY Sbjct: 185 KPLTPFDRSLDMHISNLRRKLPKRKNKPSWFKTLRGKGY 223 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 86.3 bits (212), Expect = 9e-20 Identities = 66/230 (28%), Positives = 98/230 (42%), Gaps = 8/230 (3%) Query: 6 ISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGDGIEL 65 I VVE R+ L + GY V + + N L V+D +L +G+ L Sbjct: 6 ILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGLLL 65 Query: 66 CRWLYQQHQSMIFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRRV---- 121 R L ++ + L+ +D E D + GL+ GADDYLTKPF +E R L+ R Sbjct: 66 ARELREELSLPLIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHRAMPHQ 125 Query: 122 --RTVAAPLLLDYGVLKIDLVQRR-VEYQGNFVDLTPQEFSLLYVLTQAEGSALSRTELL 178 + K+DL + +G L EF + + G +R ELL Sbjct: 126 EKENTFGREFYRFNGWKLDLNSHSLITPEGQEFKLPRSEFRAMLHFCENPGKLQTREELL 185 Query: 179 RR-AWPEAIDNPRTIDTHVLSLRKKIETDPRQPSLIQTVRNVGYRFNSSI 227 ++ E RT+D + +RK E P P++I T+ GYRF I Sbjct: 186 KKMTGRELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGYRFCGDI 235 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 80.5 bits (197), Expect = 5e-18 Identities = 72/235 (30%), Positives = 108/235 (45%), Gaps = 18/235 (7%) Query: 6 ISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQLP--TLAVIDSDLTDGDGI 63 I +VE L + L Y+V + QA NQ TLA++D L G+ Sbjct: 3 ILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSGL 62 Query: 64 ELCRWLYQQHQSM-IFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRRVR 122 ELC+ L Q S+ + +L+A ++ V GL AGADDYLTKPF M E LAR+ L RR Sbjct: 63 ELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAELLARLRALQRR-S 121 Query: 123 TVAAPLLLDYGVLKID--------LVQRRVEYQGNFVDLTPQEFSLLYVLTQAEGSALSR 174 P +L G +D + + + + LT +EF + L Q +S Sbjct: 122 PQFQPQILTLGNFSLDPSNNLLSVTISEPLNLERQEIALTVREFQIFQYLMQNPERIISG 181 Query: 175 TELLRRAW---PEAIDNPRTIDTHVLSLRKKIETDPRQPSLIQTVRNVGYRFNSS 226 +++ ++ W E + N + + +R+K+ P I+TV GYRF S Sbjct: 182 SKIRQQLWDLDEEPMSN--VVAAQMRLIRRKL-AQQNCPCPIKTVPGQGYRFTLS 233 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 57.0 bits (136), Expect = 6e-11 Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 18/201 (8%) Query: 5 YISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGDGIE 64 ++ +V+ +P+L L+ +L+ GY V +A +P + V D + + DG Sbjct: 9 HLLLVDDDPNLLLLVKDYLEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYA 68 Query: 65 LCRWLYQQHQSM---IFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRRV 121 + Q + LSAK + V GL GAD Y+ KPF +E A+++ +R+ Sbjct: 69 FIEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQ- 127 Query: 122 RTVAAPLLLDYGVLKIDLVQRRVEYQGNFVDLTPQEFSLLYVLTQAEGSALSRTELLRRA 181 A LL + ++ RV+ + V+LTP E ++ ++ Q + R Sbjct: 128 ----ADRLLQHNNHPLE-DNARVQVARD-VELTPTETKVIQLVAQGLAN--------REI 173 Query: 182 WPEAIDNPRTIDTHVLSLRKK 202 + RT+++HV ++ K Sbjct: 174 ADHLKVSQRTVESHVSNMLNK 194 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 55.8 bits (133), Expect = 1e-10 Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 5/114 (4%) Query: 6 ISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGDGIEL 65 I +V+ P+ LLS L GY V+ + A + + P L ++D + D DG ++ Sbjct: 11 ILLVDDLPNNLQLLSDLLINLGYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQV 70 Query: 66 CRWLYQQHQ----SMIFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIE 115 C + ++ + +IFI + DT D V + G DY+TKPF ++E +ARIE Sbjct: 71 CEMIKKEEELQDIPIIFISALGDTF-DKVKAFECGGVDYITKPFQIEEVVARIE 123 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 52.8 bits (125), Expect = 1e-09 Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 3/101 (2%) Query: 18 LLSWHLQQSGYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGDGIELCRWLYQQHQSM- 76 ++S L+ GY + +A Q P L ++D + DG+E+C L Q Q+ Sbjct: 32 VISELLEGEGYSTTFVTSGPEALQRVTQAQPDLILLDLMMPGMDGLEVCDRLKQDPQTRD 91 Query: 77 --IFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIE 115 + L+A + ++D++ GA DY+TKPF E LAR++ Sbjct: 92 IPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVK 132 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 51.6 bits (122), Expect = 2e-09 Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 3/120 (2%) Query: 6 ISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGDGIEL 65 I VV+ + +R L +LQ+ G+ V+ + +A F P + ++D+ + DG Sbjct: 14 ILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGFAC 73 Query: 66 CRWL---YQQHQSMIFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRRVR 122 C+ L YQ ++ +++ D E + +AGA DY+TKP R++ L+ + R Sbjct: 74 CQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLLYQNR 133 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 51.2 bits (121), Expect = 3e-09 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 3/117 (2%) Query: 6 ISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGDGIEL 65 + +VE + R ++S L+ G+ V +A + N P L V+D + +G E+ Sbjct: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 Query: 66 CRWLYQQHQSM---IFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIR 119 CR + ++ + + S+K E D G++ GAD Y+ KPF E + I+ L+R Sbjct: 90 CRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLLR 146 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 45.8 bits (107), Expect = 1e-07 Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 4/122 (3%) Query: 3 PVYISVVEGNPHLRSLLSWHLQQSG-YLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGD 61 P+ + +V+ P +R + L+ SG + V + +A + LP L + D + D Sbjct: 55 PISLLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVD 114 Query: 62 GIELCRWLYQ--QHQSM-IFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLI 118 G + + L + + QS+ + L+A+ D + G + G D +L+KPF E A + L+ Sbjct: 115 GYQFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLL 174 Query: 119 RR 120 R Sbjct: 175 AR 176 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 45.4 bits (106), Expect = 2e-07 Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 7/125 (5%) Query: 6 ISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGDGIEL 65 + VV+ P R LL L G++VQ+ A + + P + ++D + DG Sbjct: 420 VLVVDDRPESRLLLRQLLTSLGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRST 479 Query: 66 CRWLY---QQHQSMIFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRRVR 122 + + Q ++I L+A E + L AG DD+L+KPF +E +A L+ + Sbjct: 480 TQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIA----LLAKHL 535 Query: 123 TVAAP 127 VA P Sbjct: 536 AVALP 540 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 43.9 bits (102), Expect = 5e-07 Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 5/126 (3%) Query: 6 ISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQ--LPTLAVIDSDLTDGDGI 63 I VVE +R L+ L Y + + A N+ +P L + D + + DG Sbjct: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 Query: 64 ELCRWLYQQHQSM---IFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRR 120 L L + ++ L+A T +D G+ +GADDYL KPF ++ L + +++ Sbjct: 64 GLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSRLQK 123 Query: 121 VRTVAA 126 ++A Sbjct: 124 QAKLSA 129 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 42.4 bits (98), Expect = 1e-06 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 11/120 (9%) Query: 6 ISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAF-----NNQLPTLAVIDSDLTDG 60 + VV+ N H R ++ L+Q ++V+ +A N ++ ID + + Sbjct: 773 VLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPNM 832 Query: 61 DGIELCRWLYQQ---HQSMIFILSAKDTEKDIVHGLKAGADDYLTKPFG---MQEFLARI 114 DG+E+ R L HQ IFI++A E+ V G DD L KP + + LAR+ Sbjct: 833 DGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISPSVLFDSLARV 892 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 41.6 bits (96), Expect = 2e-06 Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 3/116 (2%) Query: 6 ISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGDGIEL 65 + +VE N R +LS L + GY V QA ++ P L ++D L DG Sbjct: 7 VLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGWTA 66 Query: 66 CRWLYQQHQSM---IFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLI 118 + + I L+A D + AG DDY TKP ++ L ++E LI Sbjct: 67 TKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEALI 122 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 41.2 bits (95), Expect = 3e-06 Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 4/107 (3%) Query: 3 PVY-ISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGD 61 PVY I VV+ R LL L G+ +++ S +A + + P L +D + D Sbjct: 628 PVYKILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMD 687 Query: 62 GIELCRWLYQQ---HQSMIFILSAKDTEKDIVHGLKAGADDYLTKPF 105 G E +++ Q + + + L+A E++ L AG DD+L KPF Sbjct: 688 GYEATKYIKGQVKGNATAVVALTASVLEEEKAIVLSAGCDDFLRKPF 734 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.321 0.137 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,142 Number of Sequences: 78 Number of extensions: 978 Number of successful extensions: 70 Number of sequences better than 1.0e-05: 25 Number of HSP's better than 0.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 23 Number of HSP's gapped (non-prelim): 28 length of query: 250 length of database: 48,235 effective HSP length: 61 effective length of query: 189 effective length of database: 43,477 effective search space: 8217153 effective search space used: 8217153 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 91 (39.7 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-000891 sll1353 (998 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-000891 sll1353 1756 0.0 SYNE-PCC-01-002879 slr2104 139 5e-35 SYNE-PCC-01-002873 slr2098 131 9e-33 SYNE-PCC-01-001280 sll1871 126 3e-31 SYNE-PCC-01-002617 slr1759 123 2e-30 SYNE-PCC-01-001306 sll1905 115 7e-28 SYNE-PCC-01-000800 sll1228 109 5e-26 SYNE-PCC-01-001132 sll1672 103 2e-24 SYNE-PCC-01-001294 sll1888 99 8e-23 SYNE-PCC-01-000295 sll0474 94 3e-21 SYNE-PCC-01-001509 slr0210 72 8e-15 SYNE-PCC-01-002778 slr1969 71 2e-14 SYNE-PCC-01-000985 sll1475 66 5e-13 SYNE-PCC-01-001517 slr0222 64 3e-12 SYNE-PCC-01-002220 slr1212 45 1e-06 SYNE-PCC-01-000983 sll1473 42 9e-06 >SYNE-PCC-01-000891 sll1353 Length = 998 Score = 1756 bits (4547), Expect = 0.0 Identities = 908/998 (90%), Positives = 908/998 (90%) Query: 1 MGKFLDLLQKYWLLPCLLLAGYGGNYFKLHIFFGVDFLFGSIATLLVLVCYSLPWGLVSA 60 MGKFLDLLQKYWLLPCLLLAGYGGNYFKLHIFFGVDFLFGSIATLLVLVCYSLPWGLVSA Sbjct: 1 MGKFLDLLQKYWLLPCLLLAGYGGNYFKLHIFFGVDFLFGSIATLLVLVCYSLPWGLVSA 60 Query: 61 AIAGSHTLIIWRHGYGILIIILEALVVGLMLRRRQTNLVLINSLFWLLIGIPLVYIFYRW 120 AIAGSHTLIIWRHGYGILIIILEALVVGLMLRRRQTNLVLINSLFWLLIGIPLVYIFYRW Sbjct: 61 AIAGSHTLIIWRHGYGILIIILEALVVGLMLRRRQTNLVLINSLFWLLIGIPLVYIFYRW 120 Query: 121 GLNMTSVTTSLITLKQATNGIFNSLIASFLITGFGLSKQKFSPSTNPAFFPWKKLSFEQT 180 GLNMTSVTTSLITLKQATNGIFNSLIASFLITGFGLSKQKFSPSTNPAFFPWKKLSFEQT Sbjct: 121 GLNMTSVTTSLITLKQATNGIFNSLIASFLITGFGLSKQKFSPSTNPAFFPWKKLSFEQT 180 Query: 181 XXXXXXXXXXXXXXXXXXXNGQEAFVQMEKQTVQELTALSIPIQNSVEDWYQSHLEGAEV 240 NGQEAFVQMEKQTVQELTALSIPIQNSVEDWYQSHLEGAEV Sbjct: 181 LFNLLVAFVFFPLFFITVVNGQEAFVQMEKQTVQELTALSIPIQNSVEDWYQSHLEGAEV 240 Query: 241 FATEILPLVAAINQGNGAQLPALSLMTHTIQTAFTGFSNIYVGDRQGQIIASSPEFNEVG 300 FATEILPLVAAINQGNGAQLPALSLMTHTIQTAFTGFSNIYVGDRQGQIIASSPEFNEVG Sbjct: 241 FATEILPLVAAINQGNGAQLPALSLMTHTIQTAFTGFSNIYVGDRQGQIIASSPEFNEVG 300 Query: 301 ESRLGLIQAEKIAGFSIPSQIQVSPLHRTNVNVDPHVAITIPLVANNSFEGFINASLNLA 360 ESRLGLIQAEKIAGFSIPSQIQVSPLHRTNVNVDPHVAITIPLVANNSFEGFINASLNLA Sbjct: 301 ESRLGLIQAEKIAGFSIPSQIQVSPLHRTNVNVDPHVAITIPLVANNSFEGFINASLNLA 360 Query: 361 KMKDLLYANRVSKELNITLINGQNQVVASTIANVLPLEIYQPFEGGDPRDLGSSNYHWYP 420 KMKDLLYANRVSKELNITLINGQNQVVASTIANVLPLEIYQPFEGGDPRDLGSSNYHWYP Sbjct: 361 KMKDLLYANRVSKELNITLINGQNQVVASTIANVLPLEIYQPFEGGDPRDLGSSNYHWYP 420 Query: 421 DTPANPTIRWRDSYYYHILPLDKINDWQLVLGLPARESIEKLQAXXXXXXXXXXXXXXXX 480 DTPANPTIRWRDSYYYHILPLDKINDWQLVLGLPARESIEKLQA Sbjct: 421 DTPANPTIRWRDSYYYHILPLDKINDWQLVLGLPARESIEKLQAQSVQKLGLLLFLSLVG 480 Query: 481 XXXAIGVSKRVANPLLTLAKITTDIPTKMQYQGLTPIALRSEVSEVITLNENFNEMLITL 540 AIGVSKRVANPLLTLAKITTDIPTKMQYQGLTPIALRSEVSEVITLNENFNEMLITL Sbjct: 481 LVVAIGVSKRVANPLLTLAKITTDIPTKMQYQGLTPIALRSEVSEVITLNENFNEMLITL 540 Query: 541 QNQFKIIKQAKDNLEMRVAERTHTLIVINKQLAGEIEERQRIEIKLREAKESAELANRVK 600 QNQFKIIKQAKDNLEMRVAERTHTLIVINKQLAGEIEERQRIEIKLREAKESAELANRVK Sbjct: 541 QNQFKIIKQAKDNLEMRVAERTHTLIVINKQLAGEIEERQRIEIKLREAKESAELANRVK 600 Query: 601 SEFLANISHEIRTPMNAILGFCXXXXXXXXXXXXXXKYLNAIGXXXXXXXXXXXXXXXXX 660 SEFLANISHEIRTPMNAILGFC KYLNAIG Sbjct: 601 SEFLANISHEIRTPMNAILGFCDLLLQKDLSLSQTKKYLNAIGSSSKILLALIDDILDIS 660 Query: 661 XXEAGKLVIHLEPVDLRVIIREIKQIFDYKAESKSLLLTIQIDETLNQAIYFDAVRLRQI 720 EAGKLVIHLEPVDLRVIIREIKQIFDYKAESKSLLLTIQIDETLNQAIYFDAVRLRQI Sbjct: 661 KIEAGKLVIHLEPVDLRVIIREIKQIFDYKAESKSLLLTIQIDETLNQAIYFDAVRLRQI 720 Query: 721 LFNLVGNALKFTEEGQVFIYIGVEGIQVRSQGTYISLAIEVTDTGIGIAPEDQAKIFDVF 780 LFNLVGNALKFTEEGQVFIYIGVEGIQVRSQGTYISLAIEVTDTGIGIAPEDQAKIFDVF Sbjct: 721 LFNLVGNALKFTEEGQVFIYIGVEGIQVRSQGTYISLAIEVTDTGIGIAPEDQAKIFDVF 780 Query: 781 TQSQGQSTRKYXXXXXXXXXXXXXXXXXXXEISLSSRLGEGSTFILHFPAVRLVENSLKS 840 TQSQGQSTRKY EISLSSRLGEGSTFILHFPAVRLVENSLKS Sbjct: 781 TQSQGQSTRKYGGTGLGLTITRRLTALLGGEISLSSRLGEGSTFILHFPAVRLVENSLKS 840 Query: 841 DLTNGDGGNLTDRLGSMSSSSANTTEKLLPTRVGNMAPDNNSLGNHNGPSQGFPRAVPLI 900 DLTNGDGGNLTDRLGSMSSSSANTTEKLLPTRVGNMAPDNNSLGNHNGPSQGFPRAVPLI Sbjct: 841 DLTNGDGGNLTDRLGSMSSSSANTTEKLLPTRVGNMAPDNNSLGNHNGPSQGFPRAVPLI 900 Query: 901 DQAQRQQLISLLEQEETNVWNKLRHTLISRQIRNFGDRLSSWGNEYGWEDLHTYGQSIIK 960 DQAQRQQLISLLEQEETNVWNKLRHTLISRQIRNFGDRLSSWGNEYGWEDLHTYGQSIIK Sbjct: 901 DQAQRQQLISLLEQEETNVWNKLRHTLISRQIRNFGDRLSSWGNEYGWEDLHTYGQSIIK 960 Query: 961 ALENFDSRRLEQLMGQFPQYRASLTEVSAGVDGKHASE 998 ALENFDSRRLEQLMGQFPQYRASLTEVSAGVDGKHASE Sbjct: 961 ALENFDSRRLEQLMGQFPQYRASLTEVSAGVDGKHASE 998 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 139 bits (349), Expect = 5e-35 Identities = 92/282 (32%), Positives = 132/282 (46%), Gaps = 21/282 (7%) Query: 547 IKQAKDNLEMRVAERTHTLIVINKQLAGEIEERQRIEIKLREAKESAELANRVKSEFLAN 606 ++ + LE R+ ERT E+E Q L EAK AE A + KSEFLAN Sbjct: 419 LEHLNEKLEQRIQERTQ-----------ELENSQE---SLLEAKLVAEGATKAKSEFLAN 464 Query: 607 ISHEIRTPMNAILGFCXXXXXXXXXXXXXXKYLNAIGXXXXXXXXXXXXXXXXXXXEAGK 666 +SHEIRTPMNAI+G YL + EAGK Sbjct: 465 MSHEIRTPMNAIIGM-SELVLQTDLTSQQRNYLQKVQYAGELLLGIINNILDFSKMEAGK 523 Query: 667 LVIHLEPVDLRVIIREIKQIFDYKAESKSLLLTIQIDETLNQAIYFDAVRLRQILFNLVG 726 L + +P + ++ + I +AE+K L L +D + + D +RL QIL NL Sbjct: 524 LELEQKPFSVEEVMGNLHSILGIQAEAKGLTLNFHLDPRIPPILVGDRLRLSQILINLGN 583 Query: 727 NALKFTEEGQVFIYIGVEGIQVRSQGTYISLAIEVTDTGIGIAPEDQAKIFDVFTQSQGQ 786 NA+KFT +G+ I + G ++++ L VTDTGIG+ P+ Q+K+F F Q + Sbjct: 584 NAVKFTNQGE----ITIRGQLLKTENEQTKLQFSVTDTGIGLTPDQQSKLFQWFNQGETS 639 Query: 787 STRKYXXXXXXXXXXXXXXXXXXXEISLSSRLGEGSTFILHF 828 ++R+Y +I L S +G+GSTF HF Sbjct: 640 TSRQYGGTGLGLAISKSLTELMGGDIWLESVVGQGSTF--HF 679 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 131 bits (330), Expect = 9e-33 Identities = 82/242 (33%), Positives = 120/242 (49%), Gaps = 5/242 (2%) Query: 583 EIKLREAKESAELANRVKSEFLANISHEIRTPMNAILGFCXXXXXXXXXXXXXXKYLNAI 642 E +++ AKE AE A+R+K++FLAN+SHEIRTPMNA++G +YL+ I Sbjct: 510 EAEMKRAKELAEEASRIKADFLANMSHEIRTPMNAVIGM-THLALKTDLTPRQREYLHKI 568 Query: 643 GXXXXXXXXXXXXXXXXXXXEAGKLVIHLEPVDLRVIIREIKQIFDYKAESKSLLLTIQI 702 EAGKL + DL ++ + + KA +K L L I Sbjct: 569 RFSGQHLLGVINDILDFSKIEAGKLPMESIDFDLDKVLDNVATLISEKATNKGLELLFDI 628 Query: 703 DETLNQAIYFDAVRLRQILFNLVGNALKFTEEGQVFIYIGVEGIQVRSQGTYISLAIEVT 762 D L + D +RL QIL N NA+KFTE+G + I + ++ + R Q + LA++ Sbjct: 629 DRNLPRHFIGDPLRLGQILINYANNAVKFTEQGDITIVVRLQ--EYRDQDVVLYLAVK-- 684 Query: 763 DTGIGIAPEDQAKIFDVFTQSQGQSTRKYXXXXXXXXXXXXXXXXXXXEISLSSRLGEGS 822 DTGIGI PE A +F+ F Q+ +TR + E+ + S G+GS Sbjct: 685 DTGIGIKPEHIANLFNSFQQADSSTTRNFGGTGLGLAICKRIAELMGGEVGVESEYGQGS 744 Query: 823 TF 824 TF Sbjct: 745 TF 746 >SYNE-PCC-01-001280 sll1871 Length = 674 Score = 126 bits (317), Expect = 3e-31 Identities = 122/507 (24%), Positives = 205/507 (40%), Gaps = 42/507 (8%) Query: 351 GFINASLNLAKMKDLLYANRVSKELNITLINGQNQVVASTIA--------------NVLP 396 G+++ +NL + DL+ + T + G+ S IA N Sbjct: 194 GYLSIDINLNAVDDLIRKRTGLGDTGETFLVGEINNQVSFIASDENKKLTANGSKPNFNS 253 Query: 397 LEIYQPFEGGDPRDLGSSNYHWYPDTPANPTIRWRDSYYYHILPLDKINDWQLVLGLPAR 456 L I G G +Y Y TP +W + Y + L+ + Sbjct: 254 LGINSVMAGNS----GQGSYVNYAGTPVLGVYQWIEKY-----------NLALITEISEV 298 Query: 457 ESIEKLQAXXXXXXXXXXXXXXXXXXXAIGVSKRVANPLLTLAKITTDIPTKMQYQGLTP 516 E++E + +S ++ P+L + K DI + + + P Sbjct: 299 EALELARRFTRMLVLVGLVSTALLLIAVYLLSIKITKPILLITKAAIDISSGDR-EARAP 357 Query: 517 IALRSEVSEVITLNENFNEMLITLQNQFKIIKQAKDNLEMRVAERTHTLIVINKQLAGEI 576 + E+ L ++FN M L+ +++ LE+ + + +++ Sbjct: 358 VLGEDELG---ILAKSFNLMTNELRESNSSLEKKNQELELAQKQLAVANSCLEEKVQQRT 414 Query: 577 EERQRIEIKLREAKESAELANRVKSEFLANISHEIRTPMNAILGFCXXXXXXXXXXXXXX 636 EE + L A AE AN KS FLAN+SHE+RTP+NAI+G+ Sbjct: 415 EELENTVKALELASSEAEAANATKSIFLANMSHELRTPLNAIIGYSEMLIEEAEDLDSEE 474 Query: 637 KY--LNAIGXXXXXXXXXXXXXXXXXXXEAGKLVIHLEPVDLRVIIREIKQIFDYKAESK 694 L+ I EAGK+ ++LE +L+ +I I ++ Sbjct: 475 LVPDLDKILRSGKSLLALINDLLDISKIEAGKMELYLETFNLKELIAGILDTISPLLKNN 534 Query: 695 SLLLTIQIDETLNQAIYFDAVRLRQILFNLVGNALKFTEEGQVFIYIGVEGIQVRSQGTY 754 + L ++I ++ +Y D ++LRQ + NL+ NA KFT++G I VE +V + Sbjct: 535 NNKLEVEISLE-SEEVYGDLIKLRQGILNLLSNASKFTKDG--IISFIVEEFKVDEKDW- 590 Query: 755 ISLAIEVTDTGIGIAPEDQAKIFDVFTQSQGQSTRKYXXXXXXXXXXXXXXXXXXXEISL 814 L+ +V DTGIG+ E +K+F FTQ+ +TRKY +I L Sbjct: 591 --LSFQVKDTGIGLTEEQMSKLFQPFTQADSSTTRKYGGTGLGLAITRKFCQMMGGDIYL 648 Query: 815 SSRLGEGSTFILHFPAVRLVENSLKSD 841 +S +G GS+F + P + NS K+D Sbjct: 649 TSEIGVGSSFTIKLPKYAQL-NSAKND 674 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 123 bits (309), Expect = 2e-30 Identities = 92/286 (32%), Positives = 132/286 (46%), Gaps = 14/286 (4%) Query: 552 DNLEM--RVAERTHTLIVINKQLAGEIEERQRI---EIKLREAKESAELANRVKSEFLAN 606 D +E+ +AE+ + L E E R+ + ++L +A +AE ANR K EFLA Sbjct: 725 DEIELLEAIAEQMGIALAQAALLEKERERRRELAQKNLELEKATWAAEAANRAKGEFLAM 784 Query: 607 ISHEIRTPMNAILGFCXXXXXXXXXXXXXXKYLNAIGXXXXXXXXXXXXXXXXXXXEAGK 666 +SHEIRTPMN ++G Y+ I EA K Sbjct: 785 MSHEIRTPMNGVIGM-TELLIMTDLNLQQLDYVQTIRQSGETLLTIINDILDFSKIEADK 843 Query: 667 LVIHLEPVDLRVIIREIKQIFDYKAESKSLLLTIQIDETLNQAIYFDAVRLRQILFNLVG 726 LV+ + +LR +I + ++F A +K L LT ID I D VRLRQIL NL+G Sbjct: 844 LVLETQAFELRPLIETVLEMFGPIARAKHLELTYGIDPQTPARILGDQVRLRQILSNLIG 903 Query: 727 NALKFTEEGQVFIYIGVEGIQ-VRSQGTYISL-------AIEVTDTGIGIAPEDQAKIFD 778 NALKFTE+G+V + + E S T ++L + DTGIGI + Q ++F Sbjct: 904 NALKFTEKGEVVLTVKGEPFDPAESYHTILNLPHPSHRICFNLRDTGIGIPLDRQDRLFK 963 Query: 779 VFTQSQGQSTRKYXXXXXXXXXXXXXXXXXXXEISLSSRLGEGSTF 824 F+Q +TRKY ++++S G GS F Sbjct: 964 SFSQVDSSTTRKYGGTGLGLVISQRLTQMMGGVLTVTSEPGVGSNF 1009 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 115 bits (288), Expect = 7e-28 Identities = 81/237 (34%), Positives = 113/237 (47%), Gaps = 6/237 (2%) Query: 558 VAERTHTLIVINKQLAGEIEERQRIEIKLRE---AKESAELANRVKSEFLANISHEIRTP 614 +++R ++ + L E RQ++ + +E A +AE ANR KSEFLA +SHEIRTP Sbjct: 276 ISQRKQVEMIQGQSLEMERRMRQQLAEQNQELVAATTAAEAANRSKSEFLATMSHEIRTP 335 Query: 615 MNAILGFCXXXXXXXXXXXXXXKYLNAIGXXXXXXXXXXXXXXXXXXXEAGKLVIHLEPV 674 MNAI+G + I EAGKL + + P Sbjct: 336 MNAIIGMTGLLLDTDLTTQQKY-FAQTIRNSGETLLTLINDILDFSKIEAGKLDLEVYPF 394 Query: 675 DLRVIIREIKQIFDYKAESKSLLLTIQIDETLNQAIYFDAVRLRQILFNLVGNALKFTEE 734 DL + E + A KSL L + + + D RLRQIL NL+ NA+KFTE Sbjct: 395 DLGQCLEEALDVVVPSARQKSLTLIRRFLTPIPPNLQGDVTRLRQILVNLLSNAVKFTEA 454 Query: 735 GQVFIYIGVEGIQVRSQGTYISLAIEVTDTGIGIAPEDQAKIFDVFTQSQGQSTRKY 791 GQV + + V ++G Y + V DTGIGIAP Q +F F+Q TR++ Sbjct: 455 GQVKVTVEVVDHDA-AKGEY-QICFAVQDTGIGIAPNQQQALFQAFSQGNSSITRRF 509 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 109 bits (272), Expect = 5e-26 Identities = 75/255 (29%), Positives = 122/255 (47%), Gaps = 4/255 (1%) Query: 577 EERQRIEIKLREAKESAELANRVKSEFLANISHEIRTPMNAILGFCXXXXXXXXXXXXXX 636 + R + E L +AKE+A+ ANR K+EFLA+ISHE+RTP+NAI+GF Sbjct: 140 QARHQAETTLTQAKEAADAANRAKTEFLASISHELRTPLNAIIGF-SQLLHRDPSLAPHR 198 Query: 637 KYLNAIGXXXXXXXXXXXXXXXXXXXEAGKLVIHLEPVDLRVIIREIKQIFDYKAESKSL 696 L+ I EAG+ ++ + +D ++ ++ +F +A+ K L Sbjct: 199 PTLDIINRSGEHLLELINDILEMSKIEAGRTTLNEKIIDCHRLLDNLQALFQLRAQEKQL 258 Query: 697 LLTIQIDETLNQAIYFDAVRLRQILFNLVGNALKFTEEGQVFIYIG-VEGIQV-RSQGTY 754 LL ++ + + I D +LRQ+L NL+ NA+KFT +G V + + + Q QG Sbjct: 259 LLKVERSPEVPEWIKTDGGKLRQVLINLLANAIKFTAQGGVTLKVKCLTAPQTDEGQGAS 318 Query: 755 ISLAIEVTDTGIGIAPEDQAKIFDVFTQSQGQSTRKYXXXXXXXXXXXXXXXXXXXEISL 814 I L V+DTG GIA + ++F F Q++ + +I + Sbjct: 319 IWLHFLVSDTGPGIAAHEMDELFVPFAQTE-TGLKSCQGNGLGLPISQKFVQLMGGQIQV 377 Query: 815 SSRLGEGSTFILHFP 829 S++ +GS F P Sbjct: 378 RSKVDQGSAFFFAIP 392 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 103 bits (258), Expect = 2e-24 Identities = 86/325 (26%), Positives = 150/325 (46%), Gaps = 28/325 (8%) Query: 514 LTPIALRSEVSEVITLNENFNEMLIT----LQNQFKIIKQAKDNLEMRVAERTHTLIVIN 569 +T + L + +SE NE L T L Q + +++ E+ A+R LI N Sbjct: 287 MTTLVLNAVLSE----NERSKNQLFTTNQILIEQNQKLQELYQQRELERAQREKILIEYN 342 Query: 570 KQLAGEIEERQRIEIKLREAKESAELANRVKSEFLANISHEIRTPMNAILGFCXXXXXXX 629 + L +++ L AKE AE + KS F+AN+SHE+R+P+NAI+GF Sbjct: 343 ESLQKQVD--------LVRAKEIAESEAKAKSTFVANMSHELRSPLNAIIGFSQLMLRTK 394 Query: 630 XXXXXXXKYLNAIGXXXXXXXXXXXXXXXXXXXEAGKLVIHLEPVDLRVIIREIKQIFDY 689 + I EAGK ++ DL +++ +++ + Sbjct: 395 NLPMEQYENAGIIQRSGEYLLNLINNILDFSKIEAGKTHLNRHNFDLYLLLDDLEDMLHL 454 Query: 690 KAESKSLLLTIQIDETLNQAIYFDAVRLRQILFNLVGNALKFTEEGQVFI---YIGVEGI 746 KA ++ + L D L + +Y D ++LRQIL NL+ NA+KFT EG+V + + E Sbjct: 455 KAANEGIELIFIRDHDLPRYVYGDEIKLRQILLNLLSNAIKFTTEGEVVLTSNFRNAEQQ 514 Query: 747 QVRSQGTYIS------LAIEVTDTGIGIAPEDQAKIFDVFTQSQ-GQSTRKYXXXXXXXX 799 +V + T L + DTG GI+ + + +F+ F+Q++ G++ ++ Sbjct: 515 EVINPETSTEPKNKYWLDFTIKDTGKGISEVELSHLFEAFSQTESGRNAQE--GTGLGLA 572 Query: 800 XXXXXXXXXXXEISLSSRLGEGSTF 824 +I++SS + +G+TF Sbjct: 573 ITRQFIKLMGGDINVSSVVDQGTTF 597 >SYNE-PCC-01-001294 sll1888 Length = 432 Score = 98.6 bits (244), Expect = 8e-23 Identities = 63/210 (30%), Positives = 104/210 (49%), Gaps = 3/210 (1%) Query: 585 KLREAKESAELANRVKSEFLANISHEIRTPMNAILGFCXXXXXXXXXXXXXX-KYLNAIG 643 +L +A ++AE A+R+KSEFLA+ +HE+RTP+N I+GF +++ Sbjct: 179 ELTQATKAAEEASRLKSEFLASTTHELRTPLNGIIGFLRLILDDMADSEAEKHEFVEEAY 238 Query: 644 XXXXXXXXXXXXXXXXXXXEAGKLVIHLEPVDLRVIIREIKQIFDYKAESKSLLLTIQID 703 EAG++ I LE VD +++ + +A++K L + Sbjct: 239 QSALLLLNLINDILDLAKIEAGRVGIELEVVDFSEVLQATENFALPQAQNKGLSFNLTAP 298 Query: 704 ETLNQAIYFDAVRLRQILFNLVGNALKFTEEGQVFIYIGVEGIQVRSQGTYIS--LAIEV 761 +Y + L Q++ N+VGNA+KFT EG + + + V V +G L + V Sbjct: 299 NQGPLLVYGNQRWLLQVMLNIVGNAIKFTHEGGITVAVEVMPRTVLWEGVQKPGLLKVSV 358 Query: 762 TDTGIGIAPEDQAKIFDVFTQSQGQSTRKY 791 DTGIG++ E Q+K+F F Q G ++ Y Sbjct: 359 GDTGIGVSLEQQSKLFKKFVQIDGSHSKAY 388 >SYNE-PCC-01-000295 sll0474 Length = 806 Score = 93.6 bits (231), Expect = 3e-21 Identities = 72/264 (27%), Positives = 114/264 (43%), Gaps = 11/264 (4%) Query: 575 EIEERQRIEIKLREAKESAELANRVKSEFLANISHEIRTPMNAILGFCXXXXXXXXXXXX 634 +I E ++ E +L+ + + A ++K EFLAN+SHE+RTP+N+ILG Sbjct: 393 DITEIKKAEEQLKLSNKILAKATQLKDEFLANMSHELRTPLNSILGMIETLQNQVYGPLN 452 Query: 635 XXKY--LNAIGXXXXXXXXXXXXXXXXXXXEAGKLVIHLEPVDLRVIIREIKQIFDYKAE 692 + L + EAG++ + L P + ++ A Sbjct: 453 GKQVQSLEIVENSGRHLLSLINDILDLSKIEAGRMDLDLNPTSVSALVNHSLTFVQQFAI 512 Query: 693 SKSLLLTIQIDETLNQAIYFDAVRLRQILFNLVGNALKFTEEGQVFIYIGVEGIQVRSQG 752 K + L+ +I L + D RL Q+L NL+ NA+KFT EG + V+ ++ QG Sbjct: 513 QKQINLSSEIIPNLPDVLV-DKRRLCQVLINLLNNAIKFTPEGGKVV---VQADLIKEQG 568 Query: 753 TYIS-----LAIEVTDTGIGIAPEDQAKIFDVFTQSQGQSTRKYXXXXXXXXXXXXXXXX 807 S L+ V DTGIGI + IF+ F Q R+Y Sbjct: 569 KENSQSPPQLSFTVFDTGIGIEADRLNNIFEPFVQIDSALNRRYDGTGLGLSLVKKIVEL 628 Query: 808 XXXEISLSSRLGEGSTFILHFPAV 831 ++++S+L EGS F + P V Sbjct: 629 HGGSVTVTSKLNEGSRFKITIPCV 652 >SYNE-PCC-01-001509 slr0210 Length = 417 Score = 72.0 bits (175), Expect = 8e-15 Identities = 62/235 (26%), Positives = 92/235 (39%), Gaps = 12/235 (5%) Query: 604 LANISHEIRTPMNAILGFCXXXXXXXXXXXX--XXKYLNAIGXXXXXXXXXXXXXXXXXX 661 L++I HE RTP+ AI+GF +Y+ Sbjct: 190 LSHIHHEFRTPLTAIIGFARMLRDELYGKLNPKQHQYVQGTLNSAEHLLSLVNDFLDLSK 249 Query: 662 XEAGKLVIHLEPVDLRVIIREIKQIFDYKAESKSLLLTIQIDETLNQAIYFDAVRLRQIL 721 +A + E V + + + + KA+ K L L + ID+ ++ Y D R +QIL Sbjct: 250 IDARCEELFYEQVAVEDLCLAVISMVQTKAKEKQLALNLTIDDGVDFC-YVDQRRWKQIL 308 Query: 722 FNLVGNALKFTEEGQVFIYIGVEGIQVRSQGTYISLAIEVTDTGIGIAPEDQAKIFDVFT 781 NL+ N +KFT +G V + + + T +L V DTGIGI PEDQ +F F Sbjct: 309 INLLSNGVKFTPKGSVTLAV---------KATDKALIFSVIDTGIGIDPEDQRDLFQPFK 359 Query: 782 QSQGQSTRKYXXXXXXXXXXXXXXXXXXXEISLSSRLGEGSTFILHFPAVRLVEN 836 Q + +I L+S G GS F P V+N Sbjct: 360 QISHPPSFAEKGTGLGLALSRRLAQLHGGDIQLTSTPGVGSCFSAILPLKTSVKN 414 >SYNE-PCC-01-002778 slr1969 Length = 750 Score = 70.9 bits (172), Expect = 2e-14 Identities = 71/292 (24%), Positives = 110/292 (37%), Gaps = 41/292 (14%) Query: 547 IKQAKDNLEMRVAERTHTLIVINKQLAGEIEERQRIEIKLREAKESAELANRVKSEFLAN 606 +++ K+N E RV ERT +LR+ +A+ AN +KS+F+ N Sbjct: 347 VQKQKNNFEKRVIERTK---------------------ELRDTLMAAQAANLLKSQFINN 385 Query: 607 ISHEIRTPMNAILGFCXXXXX-----XXXXXXXXXKYLNAIGXXXXXXXXXXXXXXXXXX 661 ISHE+RTP+ +I+G YL I Sbjct: 386 ISHELRTPLTSIIGLSATLLRWFDHPASLPPAKQQYYLLNIQENGKKLLDQINSIIQLSQ 445 Query: 662 XEAGKLVIHLEPVDLRVIIREIKQIFDYKAESKSLLLTIQIDETLN---QAIYFDAVRLR 718 E+G+ ++ + L + + + I + + +++D +N D RL Sbjct: 446 LESGQTALNCQSFSLHTLAQTV--IHSLLGVAIKQQINLELDYQINVGQDQFCADQERLD 503 Query: 719 QILFNLVGNALKFT-EEGQVFIYIGVEGIQVRSQGTYISLAIEVTDTGIGIAPEDQAKIF 777 QIL L+ NALKFT EG V + I E Q +V DTGIGI + +F Sbjct: 504 QILTQLLNNALKFTPAEGTVILRIWKESNQA---------IFQVEDTGIGINEQQLPVLF 554 Query: 778 DVFTQSQGQSTRKYXXXXXXXXXXXXXXXXXXXEISLSSRLGEGSTFILHFP 829 + F + T Y I + S G+G+ F P Sbjct: 555 EAFKVAGDSYTSFYETGGVGLALTKQLVELHGGYIEVESSPGQGTIFTTVIP 606 >SYNE-PCC-01-000985 sll1475 Length = 297 Score = 66.2 bits (160), Expect = 5e-13 Identities = 63/253 (24%), Positives = 106/253 (41%), Gaps = 18/253 (7%) Query: 575 EIEERQRIEIKLREAKESAELANRVKSEFLANISHEIRTPMNAILGFCXXXXXXXXXXXX 634 ++ ER+R E ++R A E + +R+K+ F + SHE RTP++ L Sbjct: 45 DVTERRRTE-EVRLALEREKELSRLKTRFFSMASHEFRTPLSTALAAAQLLENSEVAWLD 103 Query: 635 XXKY---LNAIGXXXXXXXXXXXXXXXXXXXEAGKLVIHLEPVDLRVIIREIKQIFDYKA 691 K L+ I EAGKL + +DL+++ ++ + Sbjct: 104 PDKRSRNLHRIQNSVKNMVQLLDDILIINRAEAGKLEFNPNWLDLKLLFQQFIEEIQLSV 163 Query: 692 ESKSLLLTIQIDETLNQAIYFDAVRLRQILFNLVGNALKFTEEG-QVFIYIGVEGIQVRS 750 + I + + D +R IL NL+ NA+K++ G Q+ I + ++ Q+ Sbjct: 164 SDQYYFDFICSAQDTKALV--DERLVRSILSNLLSNAIKYSPGGGQIKIALSLDSEQI-- 219 Query: 751 QGTYISLAIEVTDTGIGIAPEDQAKIFDVFTQSQGQSTRKYXXXXXXXXXXXXXXXXXXX 810 EVTD GIGI+PEDQ +IF+ F +G++ R Sbjct: 220 -------IFEVTDQGIGISPEDQKQIFEPF--HRGKNVRNITGTGLGLMVAKKCVDLHSG 270 Query: 811 EISLSSRLGEGST 823 I L S + +G+T Sbjct: 271 SILLKSAVDQGTT 283 >SYNE-PCC-01-001517 slr0222 Length = 1178 Score = 63.5 bits (153), Expect = 3e-12 Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 15/210 (7%) Query: 575 EIEERQRIEIK-LREAKESAELANRVKSEFLANISHEIRTPMNAILGFCXXXXXXXXXXX 633 +I + +R EI+ LR + EL N KS+F+ +SHE RTP+ +I+GF Sbjct: 915 DITDIKRAEIETLRSLVKEREL-NEAKSQFVDIVSHEFRTPLTSIIGFGELLSKYFDRLS 973 Query: 634 XXXK--YLNAIGXXXXXXXXXXXXXXXXXXXEAGKLVIHLEPVDLRVIIREIKQIFDYKA 691 K Y+N I +A K+ I L ++LR + ++ + F Sbjct: 974 TEKKQQYINNIQNSSQRLKQLIDDVLSISRYDANKIEIELGNINLRNLANDLIENFSCGL 1033 Query: 692 ESK-SLLLTIQIDETLNQAIYFDAVRLRQILFNLVGNALKFTEEGQVFIYIGVEGIQVRS 750 S+ + L + + + D LR IL N++ NA+K++ G I + Sbjct: 1034 GSEHNFELNYHLKPDEHSLV--DVRLLRHILENILSNAIKYSAPGST--------ITLDI 1083 Query: 751 QGTYISLAIEVTDTGIGIAPEDQAKIFDVF 780 L +V D GIGI +DQ K+F+ F Sbjct: 1084 SKDEEHLLFQVRDEGIGIPLQDQEKLFEAF 1113 >SYNE-PCC-01-002220 slr1212 Length = 844 Score = 45.1 bits (105), Expect = 1e-06 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 1/86 (1%) Query: 524 SEVITLNENFNEMLITLQNQFKIIKQAKDNLEMRVAERTHTLIVINKQLAGEIEERQRIE 583 +E+ TLN N+ + Q +++ +NLE RV +RT L IN+QL EIE++ R + Sbjct: 129 TELATLNLALNQEIKERQTAEIALQELNNNLEKRVEDRTTQLAKINQQLEQEIEDKTRAK 188 Query: 584 IKLREAKES-AELANRVKSEFLANIS 608 L + K+ A+LA V+S A IS Sbjct: 189 EDLEKNKDQLAQLAAIVESSQDAIIS 214 >SYNE-PCC-01-000983 sll1473 Length = 481 Score = 42.0 bits (97), Expect = 9e-06 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 4/92 (4%) Query: 525 EVITLNENFNEMLITLQNQ--FKIIKQAKDNLEMRVAERTHTLIVINKQLAGEIEERQRI 582 EV + + N++ I +Q ++ ++Q +LE RV +RT L N+ L EI ERQ+ Sbjct: 196 EVELMKQLANQVAIAIQQSELYEQLQQLNKDLENRVEKRTQQLAATNQSLRMEISERQKT 255 Query: 583 EIKLREAKESAE--LANRVKSEFLANISHEIR 612 E LR + + +A + F N++ +I+ Sbjct: 256 EAALRHTNHTLQSLIAASPRGIFTLNLADQIQ 287 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.319 0.137 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,729 Number of Sequences: 78 Number of extensions: 3528 Number of successful extensions: 77 Number of sequences better than 1.0e-05: 16 Number of HSP's better than 0.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 28 Number of HSP's gapped (non-prelim): 26 length of query: 998 length of database: 48,235 effective HSP length: 72 effective length of query: 926 effective length of database: 42,619 effective search space: 39465194 effective search space used: 39465194 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 97 (42.0 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-000943 sll1424 (491 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-000943 sll1424 865 0.0 SCER-S28-01-000806 ORFP:YDL058W USO1, Chr IV from 345664-351036 55 6e-10 SYNE-PCC-01-000727 sll1120 51 7e-09 MGEN-G37-01-000335 MG328 conserved hypothetical protein 49 5e-08 SCER-S28-01-002651 ORFP:YHR023W MYO1, Chr VIII from 151657-157443 48 6e-08 MGEN-G37-01-000221 MG218 cytadherence accessory protein (hmw2) 48 8e-08 MPNE-M12-01-000474 gi|13508213|ref|NP_110162.1| coiled coil pro... 45 5e-07 SCER-S28-01-001306 ORFP:YDR285W ZIP1, Chr IV from 1032427-1035054 43 2e-06 SYNE-PCC-01-001071 sll1583 43 2e-06 >SYNE-PCC-01-000943 sll1424 Length = 491 Score = 865 bits (2234), Expect = 0.0 Identities = 466/491 (94%), Positives = 466/491 (94%) Query: 1 MTSAYXXXXXXXXXXXXXAALGDHLGSKVGKARLRLFKLRPRQTAVLLTVITGTLISAST 60 MTSAY AALGDHLGSKVGKARLRLFKLRPRQTAVLLTVITGTLISAST Sbjct: 1 MTSAYILVLSVLVLGGIIAALGDHLGSKVGKARLRLFKLRPRQTAVLLTVITGTLISAST 60 Query: 61 LGILFTFSKSLREGVFQLDDILAQLRVAKTELEQASQAKEEIESELTAVREEQQLVQERS 120 LGILFTFSKSLREGVFQLDDILAQLRVAKTELEQASQAKEEIESELTAVREEQQLVQERS Sbjct: 61 LGILFTFSKSLREGVFQLDDILAQLRVAKTELEQASQAKEEIESELTAVREEQQLVQERS 120 Query: 121 RELNRNYTKALQLLRRVSEQSRNLRQEVANLSAERAQLNEQKDXXXXXXXXXXXXVKLRD 180 RELNRNYTKALQLLRRVSEQSRNLRQEVANLSAERAQLNEQKD VKLRD Sbjct: 121 RELNRNYTKALQLLRRVSEQSRNLRQEVANLSAERAQLNEQKDSLLAESSELQSQVKLRD 180 Query: 181 QELSKRQERIAQQEKVLARQREQVQSLEKRFASLEAQRQQLQAEINQRDTKIDQLDQAIA 240 QELSKRQERIAQQEKVLARQREQVQSLEKRFASLEAQRQQLQAEINQRDTKIDQLDQAIA Sbjct: 181 QELSKRQERIAQQEKVLARQREQVQSLEKRFASLEAQRQQLQAEINQRDTKIDQLDQAIA 240 Query: 241 AKDNDIQAREEKLQGLETELSFLQREVEELERYYQDYQELRGQQIAILRGQLLAFGGLRV 300 AKDNDIQAREEKLQGLETELSFLQREVEELERYYQDYQELRGQQIAILRGQLLAFGGLRV Sbjct: 241 AKDNDIQAREEKLQGLETELSFLQREVEELERYYQDYQELRGQQIAILRGQLLAFGGLRV 300 Query: 301 VSSEAVTGAVDQLLRQANRTALQLVKTPNMPVPDEPIVRVTTAQVDSITSQLQPGQEYVI 360 VSSEAVTGAVDQLLRQANRTALQLVKTPNMPVPDEPIVRVTTAQVDSITSQLQPGQEYVI Sbjct: 301 VSSEAVTGAVDQLLRQANRTALQLVKTPNMPVPDEPIVRVTTAQVDSITSQLQPGQEYVI 360 Query: 361 RVLSAGNYVQEEREIRVFFDVVPNRQVFREAETIATISLESSDFSEVDVQKRIDYLLAAA 420 RVLSAGNYVQEEREIRVFFDVVPNRQVFREAETIATISLESSDFSEVDVQKRIDYLLAAA Sbjct: 361 RVLSAGNYVQEEREIRVFFDVVPNRQVFREAETIATISLESSDFSEVDVQKRIDYLLAAA 420 Query: 421 QFRARREGILGPIQVEDGRIKTLIDFIEQLRRQADNPPNEVRAIAAEDTSVVGPLKIRII 480 QFRARREGILGPIQVEDGRIKTLIDFIEQLRRQADNPPNEVRAIAAEDTSVVGPLKIRII Sbjct: 421 QFRARREGILGPIQVEDGRIKTLIDFIEQLRRQADNPPNEVRAIAAEDTSVVGPLKIRII 480 Query: 481 ALRGNQIMFEN 491 ALRGNQIMFEN Sbjct: 481 ALRGNQIMFEN 491 >SCER-S28-01-000806 ORFP:YDL058W USO1, Chr IV from 345664-351036 Length = 1790 Score = 54.7 bits (130), Expect = 6e-10 Identities = 44/183 (24%), Positives = 91/183 (49%), Gaps = 11/183 (6%) Query: 87 VAKTELEQASQAKEEIESELTAVREEQQLVQERSRELNRNYTKALQLLRRVSEQSRNLRQ 146 V K++LE + ++ ++E+ + +EE++L+ R +EL + Q ++ SE+ R R Sbjct: 1607 VLKSKLEDIERELKDKQAEIKSNQEEKELLTSRLKELEQELDSTQQKAQK-SEEER--RA 1663 Query: 147 EVANLSAERAQLNEQKDXXXXXXXXXXXXVKLRDQELSKRQERIAQQEKVLARQREQVQS 206 EV E++QL+E+ + ++Q + ++ + +K QR++++ Sbjct: 1664 EVRKFQVEKSQLDEK----AMLLETKYNDLVNKEQAWKRDEDTV---KKTTDSQRQEIEK 1716 Query: 207 LEKRFASLEAQRQQLQAEINQRDTKIDQLDQAIAAKDNDIQAREEKLQGLETELSFLQRE 266 L K +L+A+ +L+ E N+ ++ID L + D KL+ L E+S + + Sbjct: 1717 LAKELDNLKAENSKLK-EANEDRSEIDDLMLLVTDLDEKNAKYRSKLKDLGVEISSDEED 1775 Query: 267 VEE 269 EE Sbjct: 1776 DEE 1778 Score = 54.7 bits (130), Expect = 6e-10 Identities = 51/229 (22%), Positives = 103/229 (44%), Gaps = 36/229 (15%) Query: 79 DDILAQLRVAKTELEQASQAKEEIE---SELTAVREEQQL----VQERSRELNRNYTKAL 131 D+ +Q+ + K +LE A+ A +E SELT REE + + EL + Sbjct: 1050 DEYESQISLLKEKLETATTANDENVNKISELTKTREELEAELAAYKNLKNELETKLETSE 1109 Query: 132 QLLRRVSEQSRNLRQEVANLSAERAQLNEQKDXXXXXXXXXXXXVKLRDQELSKRQERIA 191 + L+ V E +L++E L E + +Q + + +L K +E+IA Sbjct: 1110 KALKEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIA 1169 Query: 192 QQEKV----LARQREQVQSLEKRFASLEAQRQQLQAEI-----------NQRDTKIDQLD 236 +E+ +++ +++ S ++ S++ + +L+ E+ N + ++ID L+ Sbjct: 1170 NKERQYNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDALN 1229 Query: 237 QAIAA--KDND------------IQAREEKLQGLETELSFLQREVEELE 271 I K N+ +++ K++ L+ E +F ++EV ELE Sbjct: 1230 LQIKELKKKNETNEASLLESIKSVESETVKIKELQDECNFKEKEVSELE 1278 Score = 50.4 bits (119), Expect = 1e-08 Identities = 65/388 (16%), Positives = 174/388 (44%), Gaps = 40/388 (10%) Query: 79 DDILAQLRVAKTEL----EQASQAKEEIESELTAVREEQQLVQERSRELNRNYTKALQLL 134 +D+ AQL+ + ++ Q ++ ++ E+T+ ++E + +++++ EL ++ + Sbjct: 1155 EDLAAQLKKYEEQIANKERQYNEEISQLNDEITSTQQENESIKKKNDELEGE----VKAM 1210 Query: 135 RRVSEQSRNL-RQEVANLSAERAQLNEQKDXXXXXXXXXXXXVKLRDQELSKRQERIAQQ 193 + SE+ NL + E+ L+ + +L ++ + V+ ++ + Q+ + Sbjct: 1211 KSTSEEQSNLKKSEIDALNLQIKELKKKNETNEASLLESIKSVESETVKIKELQDECNFK 1270 Query: 194 EKVLARQREQVQSLE---KRFASLEAQRQQLQAEINQRDTKIDQLDQAIAAKDNDIQARE 250 EK ++ +++++ E ++ L+ + ++++ E++ + T++ + I + E Sbjct: 1271 EKEVSELEDKLKASEDKNSKYLELQKESEKIKEELDAKTTELKIQLEKITNLSKAKEKSE 1330 Query: 251 EKLQGLETELSFLQREVEELERYYQDYQELRGQQIAILRGQLLAFGGLRVVS--SEAVTG 308 +L L+ S ++ EE ++ +++ Q R +LL G + SE + Sbjct: 1331 SELSRLKKTSSEERKNAEEQLEKLKNEIQIKNQAFEKER-KLLNEGSSTITQEYSEKINT 1389 Query: 309 AVDQLLRQANRTALQLVKTPNMPVPDEPIVRVTTAQVDSITSQLQPGQEYVIRVLSAGNY 368 D+L+R N L+ + N R +V +L ++ I+ L Sbjct: 1390 LEDELIRLQNENELKAKEIDN--------TRSELEKVSLSNDELLEEKQNTIKSL----- 1436 Query: 369 VQEEREIRVFFDVVPNRQVFREAETIATISLESSDFSEVDVQKRIDYLLAAAQFRARREG 428 + EI + D ++ R E + +I + ++ D++ + L AA + +A+ E Sbjct: 1437 ---QDEILSYKD-----KITRNDEKLLSIERD----NKRDLESLKEQLRAAQESKAKVEE 1484 Query: 429 ILGPIQVEDGRIKTLIDFIEQLRRQADN 456 L ++ E + K ++ +++ ++ ++ Sbjct: 1485 GLKKLEEESSKEKAELEKSKEMMKKLES 1512 Score = 45.1 bits (105), Expect = 5e-07 Identities = 55/267 (20%), Positives = 113/267 (42%), Gaps = 56/267 (20%) Query: 68 SKSLREGVF----QLDDILAQLRVAKTELEQASQAKEEIESELTAVREEQQL-------V 116 +KSL+E + ++ I L K + S+ KE I EL + Q + Sbjct: 901 TKSLKEDIAAKITEIKAINENLEEMKIQCNNLSKEKEHISKELVEYKSRFQSHDNLVAKL 960 Query: 117 QERSRELNRNYTKALQ-----LLRRVSE-------QSRNLRQEVANLSAERAQLNEQKDX 164 E+ + L NY K +Q L++ V E Q NL+ ++ ++S E+ ++ Sbjct: 961 TEKLKSLANNY-KDMQAENESLIKAVEESKNESSIQLSNLQNKIDSMSQEKENFQIERGS 1019 Query: 165 XXXXXXXXXXXV----KLRDQELSKRQERIAQQEKVLARQREQVQSLE-------KRFAS 213 + + +++ +SK + E ++ +E++++ + + Sbjct: 1020 IEKNIEQLKKTISDLEQTKEEIISKSDSSKDEYESQISLLKEKLETATTANDENVNKISE 1079 Query: 214 LEAQRQQLQAEI-------NQRDTKIDQLDQAIA-AKDNDIQAREEKLQ----------- 254 L R++L+AE+ N+ +TK++ ++A+ K+N+ +EEK+Q Sbjct: 1080 LTKTREELEAELAAYKNLKNELETKLETSEKALKEVKENEEHLKEEKIQLEKEATETKQQ 1139 Query: 255 --GLETELSFLQREVEELERYYQDYQE 279 L L L++E E+L + Y+E Sbjct: 1140 LNSLRANLESLEKEHEDLAAQLKKYEE 1166 Score = 44.7 bits (104), Expect = 7e-07 Identities = 43/226 (19%), Positives = 100/226 (44%), Gaps = 21/226 (9%) Query: 69 KSLREGVFQLDDILAQLRVAKTELEQ-ASQAKEEIESELTAVREEQQLVQERSRELNRNY 127 +SL+E + + A++ +LE+ +S+ K E+E +++ + ++ EL + Sbjct: 1466 ESLKEQLRAAQESKAKVEEGLKKLEEESSKEKAELEKSKEMMKKLESTIESNETELKSSM 1525 Query: 128 TKALQLLRRVSEQSRNLRQEVANLSAERAQL-----NEQKDXXXXXX-----XXXXXXVK 177 + ++ + ++ +++ NL E++ L +KD ++ Sbjct: 1526 ETIRKSDEKLEQSKKSAEEDIKNLQHEKSDLISRINESEKDIEELKSKLRIEAKSGSELE 1585 Query: 178 LRDQELSKRQERI---AQQEKVLARQREQVQSLEKRFASLEAQRQQLQAEINQRDTKIDQ 234 QEL+ QE+I A++ VL + +++ +E+ +A+ + Q E +++ + Sbjct: 1586 TVKQELNNAQEKIRINAEENTVL---KSKLEDIERELKDKQAEIKSNQEEKELLTSRLKE 1642 Query: 235 LDQAIAAKDNDIQAREE----KLQGLETELSFLQREVEELERYYQD 276 L+Q + + Q EE +++ + E S L + LE Y D Sbjct: 1643 LEQELDSTQQKAQKSEEERRAEVRKFQVEKSQLDEKAMLLETKYND 1688 Score = 44.7 bits (104), Expect = 7e-07 Identities = 48/226 (21%), Positives = 102/226 (45%), Gaps = 37/226 (16%) Query: 89 KTELEQASQAKEEI-ESELTAVREEQQLVQERSRELNRNYTKALQL-------LRRVSEQ 140 ++ELE+ S + +E+ E + ++ Q + ++ RN K L + L + EQ Sbjct: 1412 RSELEKVSLSNDELLEEKQNTIKSLQDEILSYKDKITRNDEKLLSIERDNKRDLESLKEQ 1471 Query: 141 SRNLRQEVANL-----------SAERAQLNEQKDXXXXXXXXXXXXVKLRDQELSKRQER 189 R ++ A + S E+A+L + K+ ++ + EL E Sbjct: 1472 LRAAQESKAKVEEGLKKLEEESSKEKAELEKSKEMMKKLEST----IESNETELKSSMET 1527 Query: 190 IAQQEKVLARQREQVQSLEKRFASLEAQRQQLQAEINQRDTKIDQLDQA--IAAKDN--- 244 I + ++ L + ++ S E+ +L+ ++ L + IN+ + I++L I AK Sbjct: 1528 IRKSDEKLEQSKK---SAEEDIKNLQHEKSDLISRINESEKDIEELKSKLRIEAKSGSEL 1584 Query: 245 -----DIQAREEKLQGLETELSFLQREVEELERYYQDYQ-ELRGQQ 284 ++ +EK++ E + L+ ++E++ER +D Q E++ Q Sbjct: 1585 ETVKQELNNAQEKIRINAEENTVLKSKLEDIERELKDKQAEIKSNQ 1630 Score = 44.7 bits (104), Expect = 7e-07 Identities = 41/199 (20%), Positives = 89/199 (44%), Gaps = 6/199 (3%) Query: 77 QLDDILAQLRVAKTELEQASQAKEEIESELTAVREEQQLVQERSRELNRNYTKALQLLRR 136 +LD +L++ ++ S+AKE+ ESEL+ +++ ++ + E +Q+ + Sbjct: 1304 ELDAKTTELKIQLEKITNLSKAKEKSESELSRLKKTSSEERKNAEEQLEKLKNEIQIKNQ 1363 Query: 137 VSEQSRNLRQEVANLSAER--AQLNEQKDXXXXXXXXXXXXVKLRDQELSKRQERIAQQE 194 E+ R L E ++ + ++N +D K D S+ ++ + Sbjct: 1364 AFEKERKLLNEGSSTITQEYSEKINTLEDELIRLQNENELKAKEIDNTRSELEKVSLSND 1423 Query: 195 KVLARQREQVQSLEKRFASLEAQ--RQQLQAEINQRDTK--IDQLDQAIAAKDNDIQARE 250 ++L ++ ++SL+ S + + R + +RD K ++ L + + A E Sbjct: 1424 ELLEEKQNTIKSLQDEILSYKDKITRNDEKLLSIERDNKRDLESLKEQLRAAQESKAKVE 1483 Query: 251 EKLQGLETELSFLQREVEE 269 E L+ LE E S + E+E+ Sbjct: 1484 EGLKKLEEESSKEKAELEK 1502 >SYNE-PCC-01-000727 sll1120 Length = 1200 Score = 51.2 bits (121), Expect = 7e-09 Identities = 41/202 (20%), Positives = 87/202 (43%), Gaps = 2/202 (0%) Query: 77 QLDDILAQLRVAKTELEQASQAKEEIESELTAVREEQQLVQERSRELNRNYTKALQLLRR 136 QL ++ Q R A+ EQ + + + T + ++Q Q++ EL +N Q L Sbjct: 735 QLMEMRQQQREAQLHGEQTERDIARLSQQQTQINQQQINQQQKLAELQQNLALLQQSLPP 794 Query: 137 VSEQSRNLRQEVANLSAERAQLNEQKDXXXXXXXXXXXXVKLRDQELSKRQERIAQQEKV 196 + +Q + +Q++ L E +Q ++Q + + Q L + ++ + + Sbjct: 795 LEQQLASAQQQLTAL--ETSQTHQQWQTIQIQIRTVEAEYQRQLQALRQGEDHLKDLQNS 852 Query: 197 LARQREQVQSLEKRFASLEAQRQQLQAEINQRDTKIDQLDQAIAAKDNDIQAREEKLQGL 256 R E++ +++ A +AQ L E Q + +++ AI + + EKL Sbjct: 853 SQRLEEKIAQAQEKIAQHQAQDLTLAQEQEQLKIALAEMNGAIQTTEAQLAKLSEKLGST 912 Query: 257 ETELSFLQREVEELERYYQDYQ 278 + E L+ ++ +L Q+ Q Sbjct: 913 KQERDRLETQLNQLRSQQQEQQ 934 Score = 50.4 bits (119), Expect = 1e-08 Identities = 45/231 (19%), Positives = 106/231 (45%), Gaps = 15/231 (6%) Query: 48 LTVITGTLISASTLGILFTFSKSLREGVFQLDDILAQLRVAKTELEQASQAKEEIESELT 107 + + G L+ AS G + S++ R G+ + ++++ +L Q Q ++++ Sbjct: 663 IVTLEGDLLEAS--GAMSGGSRNQRSGL-RFGTMVSEDTAEVKQLRQRLQDIQQVQG--- 716 Query: 108 AVREEQQLVQE--RSRELNRNYTKALQLLRRVSEQSRNLRQEVANLSAERAQLNEQKDXX 165 R E+ L++ RSR+L + + Q R +++A LS ++ Q+N+Q+ Sbjct: 717 --RNEELLLERTVRSRQLTQQLMEMRQQQREAQLHGEQTERDIARLSQQQTQINQQQINQ 774 Query: 166 XXXXXXXXXXVKLRDQELSKRQERIAQQEKVL-----ARQREQVQSLEKRFASLEAQRQQ 220 + L Q L ++++A ++ L ++ +Q Q+++ + ++EA+ Q+ Sbjct: 775 QQKLAELQQNLALLQQSLPPLEQQLASAQQQLTALETSQTHQQWQTIQIQIRTVEAEYQR 834 Query: 221 LQAEINQRDTKIDQLDQAIAAKDNDIQAREEKLQGLETELSFLQREVEELE 271 + Q + + L + + I +EK+ + + L +E E+L+ Sbjct: 835 QLQALRQGEDHLKDLQNSSQRLEEKIAQAQEKIAQHQAQDLTLAQEQEQLK 885 Score = 48.9 bits (115), Expect = 3e-08 Identities = 79/350 (22%), Positives = 139/350 (39%), Gaps = 47/350 (13%) Query: 106 LTAVREEQQLVQERSRELNRNYTKALQLLRRVSEQSRNLRQEVANLSA-----ERAQLNE 160 LT V++ ++ Q + EL R + L R+ +E+ + LRQ+V + + + Sbjct: 200 LTEVQDREERCQIIATELERTLER-LAADRQKAEKYQALRQQVQEKQGWAKVIQYKAVEQ 258 Query: 161 QKDXXXXXXXXXXXXVKLRDQELSKRQERIAQQEKVLARQREQVQSLEK--------RFA 212 Q+ + Q L +R + I Q+ L + QV++L + + A Sbjct: 259 QRQKLWGQLERDREQSQQIQQALDQRSQAIQTQQTELEKLNAQVKALGEEEQLAVAAQLA 318 Query: 213 SLEAQRQQLQAEINQRDTKIDQLDQAIAAKDNDIQAREEKLQGLETELSFLQRE-VEELE 271 + +AQR QLQ N D +I Q + +I +++ ++ E SF + + +LE Sbjct: 319 TQKAQRDQLQQRYNDGDRQITNHQQQVGQIQAEISQSQQQFLHIQQEKSFHNTQTLPQLE 378 Query: 272 RYYQDYQELRGQQIAILRGQLLAFGGLRVVSSEAVTGAVDQLLRQANRTALQLVKTPNMP 331 Q Q QQ+ LR Q A +SEA QL R N+ +L+ Sbjct: 379 AAVQTSQ----QQLEQLRHQAQAIAS----ASEAWVQEQTQLSRTVNQLQDELIPQ---- 426 Query: 332 VPDEPIVRVTTAQVDSITSQLQPGQEYVIRVLSAGNYVQEEREIRV----FFDVVPNRQV 387 R AQ++ QL + +L+ + EE++ F Q+ Sbjct: 427 -------RSQLAQLEERQQQLLTNLAELTPLLTKVSVELEEKQFAQGQFNFQGEALTSQI 479 Query: 388 FREAETIATISLESSDFSEV---------DVQKRIDYLLAAAQFRARREG 428 A +A + E S E + Q+++D L AA+Q + +G Sbjct: 480 QTLASDLAQLEQERSLLQETQTRLLKEQQEKQRQLDKLEAASQAQQEVQG 529 >MGEN-G37-01-000335 MG328 conserved hypothetical protein Length = 756 Score = 48.5 bits (114), Expect = 5e-08 Identities = 53/235 (22%), Positives = 103/235 (43%), Gaps = 23/235 (9%) Query: 79 DDILAQLRVAKTELEQASQA----KEEIESELTAVREEQQLVQERSRELNR---NYTKAL 131 DD+L + R +L+ A +E+ EL +++E+ L+ ++ L N + L Sbjct: 295 DDLLQENRDLYEQLQNKPVAINPLSDEVNEELENLKQEKALLSDQLDALKNKSSNVQQQL 354 Query: 132 QLLRRVSEQSRNLRQEV--ANLSAERAQLNEQKDXXXXXXXXXXXXVKLRDQELSKRQER 189 LL ++ Q L+ ++ A + +R L EQ++ D+ K + Sbjct: 355 ALLPVLNNQINELQNQLLTAREANQRLDLVEQENDFLKNELKKLHDNTSNDEN-EKYDDL 413 Query: 190 IAQQEKVLARQREQVQSLEKRFASLEAQRQQ-LQAEINQRDTKIDQLDQAIAAKDNDI-- 246 + Q E + + L+ + +L Q+ + A ++ D +D+++ +KDND Sbjct: 414 LNQYELLFDENETKFDKLQVKQQALNLDYQKTISALKHENDVLLDEIEWT-RSKDNDFNN 472 Query: 247 ---------QAREEKLQGLETELSFLQREVEELERYYQDYQELRGQQIAILRGQL 292 +A +EKL GL + LQ ++ ELE + ++ L Q+ L+ QL Sbjct: 473 TKNSFEEQKKALDEKLNGLTIQNQQLQDKIAELEEWNEEKSNLNTNQLVNLQQQL 527 >SCER-S28-01-002651 ORFP:YHR023W MYO1, Chr VIII from 151657-157443 Length = 1928 Score = 48.1 bits (113), Expect = 6e-08 Identities = 39/184 (21%), Positives = 83/184 (45%), Gaps = 14/184 (7%) Query: 84 QLRVAKTELEQASQAKEEIESELTAVREEQQLVQERSRELNRNYTKALQLLRRVSEQSRN 143 Q+ K +L++ K+ +E + E + Q+ + N K LL RV S Sbjct: 869 QINKLKNDLQEMESKKKFLEEKNQKTVNELENTQDLLNQEKENLRKNESLLNRVKTSSET 928 Query: 144 LRQEVANLSAERAQLNEQKDXXXXXXXXXXXXVKLRDQELSKRQERIAQQEKVLARQREQ 203 L+++ +L +E+ +++ +K ++ Q++ QE I ++E L + + Sbjct: 929 LQKQFDDLVSEKDEISREK-------LEVAQNLEEAHQKIQGLQETIREREATLEKLHSK 981 Query: 204 VQSLEKRFASLE---AQRQQLQAEINQRDTKID----QLDQAIAAKDNDIQAREEKLQGL 256 L K+ + L ++ Q Q+ I + K++ +L I +K+ +I++ +KL Sbjct: 982 NNELIKQISDLNCDISKEQSSQSLIKESKLKLENEIKRLKDVINSKEEEIKSFNDKLSSS 1041 Query: 257 ETEL 260 E +L Sbjct: 1042 EEDL 1045 Score = 45.1 bits (105), Expect = 5e-07 Identities = 47/212 (22%), Positives = 93/212 (43%), Gaps = 16/212 (7%) Query: 69 KSLREGVFQLDDILAQLRVAKTELEQASQAKEEIESELTAVREEQQLVQERSRELNRNYT 128 K + E + +D QL+ EL++ K+ + +L ++E V++RS+ YT Sbjct: 1532 KLIWEREMERNDSDMQLQETLLELKRVQDVKKILSDDLAHLKERLSAVEDRSQ-----YT 1586 Query: 129 KALQLLRRVSEQS----RNLRQEVANLSAERAQLNEQKDXXXXXXXXXXXXVKLRDQELS 184 + L+ S NL++E A L + + + L+ Sbjct: 1587 DEINRLKEELNCSLKAETNLKKEFATLKYKLETSTNDSEAKISDLLKQLDHYTKVVEMLN 1646 Query: 185 KRQERIAQQEKVLARQRE----QVQSLEKRFASLEAQRQQLQAEINQRDTKIDQLDQAIA 240 ++ I+ EK L ++ E + +SL+ + SL +Q+L++++NQ K D L + A Sbjct: 1647 NEKDAISLAEKELYQKYEALNTECESLKGKIVSLTKIKQELESDLNQ---KTDALQISNA 1703 Query: 241 AKDNDIQAREEKLQGLETELSFLQREVEELER 272 A + Q +E + ++ LQ ++E+ R Sbjct: 1704 ALSSSTQKNKEITEKIKYLEETLQLQMEQNSR 1735 Score = 42.0 bits (97), Expect = 4e-06 Identities = 37/201 (18%), Positives = 91/201 (45%), Gaps = 21/201 (10%) Query: 71 LREGVFQLDDILAQLRVAKTELEQASQAKEEIESELTAVREEQQLVQERSRELNRNYTKA 130 ++E +L++ + +L+ + + +EEI+S + ++ + + L +N A Sbjct: 1006 IKESKLKLENEIKRLK------DVINSKEEEIKSFNDKLSSSEEDLDIKLVTLEKNCNIA 1059 Query: 131 LQLLRRVSEQSRNLRQEVANLSAERAQLNEQKDXXXXXXXXXXXXVKLRDQELSKRQERI 190 + L+ + ++ +LR + N E+A LN Q +K ++ EL K +E+I Sbjct: 1060 MSRLQSLVTENSDLRSKNENFKKEKAALNNQ--------------LKNKESELLKMKEKI 1105 Query: 191 AQQEKVLARQREQVQSLEKRFASLEAQRQQLQAEINQRDTKIDQLDQAIAAKDNDIQARE 250 +K LA +Q + A+ ++ + ++ + + ++ + + + + +E Sbjct: 1106 DNHKKELATFSKQRDDAVSEHGKITAELKETRIQLTEYKSNYQKIKEEYSNFQRETKEQE 1165 Query: 251 EKLQGLETELSFLQREVEELE 271 +K + E S +++ELE Sbjct: 1166 QKKRNSLVE-SLNDSKIKELE 1185 >MGEN-G37-01-000221 MG218 cytadherence accessory protein (hmw2) Length = 1805 Score = 47.8 bits (112), Expect = 8e-08 Identities = 55/231 (23%), Positives = 104/231 (45%), Gaps = 31/231 (13%) Query: 69 KSLREGVFQLDDILAQLRVAKTELE----QASQAKEEIESELTAVREEQQLVQERSRELN 124 K +++ +L +L +L KT+L + S+ +EE E++ + E Q+ +Q ++ N Sbjct: 1354 KEVKKKEGELQKLLVELETRKTKLNNDFAKFSRQREEFENQRLKLLELQKTLQTQTNS-N 1412 Query: 125 RNYTKALQLLRRVSEQSRNLRQEVANLSAERAQLNEQKDXXXXXXXXXXXXVKLRDQELS 184 TKA+Q E + ++ + L+ ++ + ++ K K+RD+ Sbjct: 1413 NFKTKAIQ------EIENSYKRGMEELNFQKKEFDKNKSRLYEYFR------KMRDEI-- 1458 Query: 185 KRQERIAQQEKVLARQREQVQSLEKRFASLEAQRQQLQAEINQRDTKIDQLDQAIAAKDN 244 ER Q K++ ++ ++ +L LEAQ +L E N D K +L D Sbjct: 1459 ---ERKESQVKLVLKETQRKANL------LEAQANKLNIEKNTIDFKEKELKAFKDKVDQ 1509 Query: 245 DIQA---REEKLQGLETELSFLQREVEELERYYQDYQELRGQQIAILRGQL 292 DI + + ++L L E LQ+ + E ER L ++I ++ QL Sbjct: 1510 DIDSTNKQRKELNELLNENKLLQQSLIERERAINSKDSLLNKKIETIKRQL 1560 Score = 44.7 bits (104), Expect = 7e-07 Identities = 57/263 (21%), Positives = 109/263 (41%), Gaps = 50/263 (19%) Query: 73 EGVFQLDDILAQLRVAKTEL-------------------EQASQAKEEIESELTAVRE-- 111 E +FQL + +AQ R EL +Q Q + + E+EL A ++ Sbjct: 478 EAIFQLKEKVAQERKELEELYLVKKQKQDQKENELLFFEKQLKQHQADFENELEAKQQEL 537 Query: 112 -------EQQLVQERSRELNRNYTKALQLLRRVSEQSRN----------LRQEVANLSAE 154 E+ ++ +E + N TKA Q+ S+ + L+ E NL E Sbjct: 538 FEAKHALERSFIKLEDKEKDLN-TKAQQIANEFSQLKTDKSKSADFELMLQNEYENLQQE 596 Query: 155 RAQLNEQKDXXXXXXXXXXXXVKLRDQELSKRQERIAQQEKVLARQR--------EQVQS 206 + +L +++ ++ + +EL +++E + Q K ++R E V S Sbjct: 597 KQKLFQERTYFERNAAVLSNRLQQKREELLQQKETLDQLTKSFEQERLINQREHKELVAS 656 Query: 207 LEKRFASLEAQRQQLQAEINQRDTKIDQLDQAIAAKDNDIQAREEKLQGLETELSFLQRE 266 +EK+ L + Q + + + AI K+ +I+A E++L +Q + Sbjct: 657 VEKQKEILGKKLQDFSQTSLNASKNLAEREMAIKFKEKEIEATEKQLLNDVNNAEVIQAD 716 Query: 267 VEEL-ERYYQDYQELRG--QQIA 286 + +L + Q+ EL+ Q+IA Sbjct: 717 LAQLNQSLNQERSELQNAKQRIA 739 Score = 41.6 bits (96), Expect = 6e-06 Identities = 48/253 (18%), Positives = 106/253 (41%), Gaps = 43/253 (16%) Query: 69 KSLREGVFQLDDILAQLRVAKTELEQASQAKEEIESELTAVREEQQLVQERSRELNRNYT 128 K L Q+ + +QL KT+ +++ + +++E +++E+Q + + RN Sbjct: 556 KDLNTKAQQIANEFSQL---KTDKSKSADFELMLQNEYENLQQEKQKLFQERTYFERN-- 610 Query: 129 KALQLLRRVSEQSRNLRQEVANLSAERAQLNEQKDXXXXXXXXXXXXVKLRDQELSKR-- 186 A L R+ ++ L Q+ L +++ V+ + + L K+ Sbjct: 611 -AAVLSNRLQQKREELLQQKETLDQLTKSFEQERLINQREHKELVASVEKQKEILGKKLQ 669 Query: 187 ---------QERIAQQEKVLARQREQVQSLEKRFAS-------LEAQRQQLQAEINQRDT 230 + +A++E + + +++++ EK+ + ++A QL +NQ + Sbjct: 670 DFSQTSLNASKNLAEREMAIKFKEKEIEATEKQLLNDVNNAEVIQADLAQLNQSLNQERS 729 Query: 231 KIDQLDQAIAAKDND-----------IQAREEKLQGLET--------ELSFLQREVEELE 271 ++ Q IA ND +Q R ++LQ LE ++ + E+++L Sbjct: 730 ELQNAKQRIADFHNDSLKKLNEYELSLQKRLQELQTLEANQKQHSYQNQAYFEGELDKLN 789 Query: 272 RYYQDYQELRGQQ 284 R Q + LR +Q Sbjct: 790 REKQAFLNLRKKQ 802 >MPNE-M12-01-000474 gi|13508213|ref|NP_110162.1| coiled coil protein, putative structural protein involved in cytosceleton [Mycoplasma pneumoniae] Length = 1033 Score = 45.1 bits (105), Expect = 5e-07 Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 45/205 (21%) Query: 77 QLDDILAQLRVAKTELEQASQAKEEIESELTAVREEQ-QLVQERSRELNRNYTKALQ--- 132 QLD L + +LE+ Q + ++ + + V +E+ +L+Q ++ L + + Q Sbjct: 362 QLDKALKHNAALQIQLEE--QLAKPLQYDQSPVLQERIELLQNQNTNLTQELNELQQKLF 419 Query: 133 -------LLRRVSEQSRNLRQEVANLSAERAQLNEQKDXXXXXXXXXXXXVKLRDQELSK 185 LL R+ E++R L+Q + N E QLN L K Sbjct: 420 KSQNNSLLLARLEEENRTLKQHLQNNLPEANQLN---------------------FVLEK 458 Query: 186 RQERIAQQEKVLARQREQVQSLEKRFASLEAQRQQLQAEINQRDTKIDQLDQAIAAKDND 245 + E++ Q + L Q EQ + K+ A L++EIN +T++ L Q Sbjct: 459 QLEQLQQDKHSLTLQIEQYKFDSKKHQEQLALIPSLRSEINSLETEVISLKQT------- 511 Query: 246 IQAREEKLQGLETELSFLQREVEEL 270 ++L +E E +FL+ E+++L Sbjct: 512 ----NQRLSLIERENNFLKTEIKQL 532 Score = 42.4 bits (98), Expect = 3e-06 Identities = 58/259 (22%), Positives = 107/259 (41%), Gaps = 26/259 (10%) Query: 77 QLDDILAQLRVAKTELEQASQAKEEIESELTAVREEQQLVQERSRELNRNYTKALQLLRR 136 Q + +L ++T+L Q+ E LT ++ + +L+QE +L Q + Sbjct: 695 QNQSLTDKLMASETQLNHLQQSDEN----LTQLQTQHELLQESYNKLQDEANHTQQQFHQ 750 Query: 137 VSEQSRNLRQEVANLSAERAQLNEQKDXXXXXXXXXXXXVKLRDQELSKRQERIAQQEKV 196 + Q++A +L + K VK + L+ + Q+K Sbjct: 751 AQNELDAAHQQLALFKQNNEELTD-KCSNIQNELHDLNRVKTNWENLNTEHNLL--QDKY 807 Query: 197 LARQREQVQSLEKRFASLEAQRQQLQAEINQ-----RDTKIDQLDQAIAAKDNDIQAREE 251 A+Q+EQ+Q A ++A+ + LQ N+ + +I L++A A+ D+ + E Sbjct: 808 -AQQKEQMQHEHSNLAQIQAEHELLQESYNKVKAELNEIQITNLNEA-NAQYQDLLSAYE 865 Query: 252 KLQG----LETELSFLQR---EVEELERYYQDYQELRGQQIAILRGQLLAFGGLRVVSSE 304 LQ L+ EL L + E ++L + + + Q A L A+ L + Sbjct: 866 LLQSNHNKLKQELQVLNQVNLEKQQLAQKLHNTHQSLSQTHAELTQLQAAYNNL-----Q 920 Query: 305 AVTGAVDQLLRQANRTALQ 323 A D+LL Q N+ L+ Sbjct: 921 ATPPVSDELLEQFNQVQLE 939 >SCER-S28-01-001306 ORFP:YDR285W ZIP1, Chr IV from 1032427-1035054 Length = 875 Score = 43.1 bits (100), Expect = 2e-06 Identities = 45/222 (20%), Positives = 98/222 (44%), Gaps = 34/222 (15%) Query: 68 SKSLREGVFQLDDILAQLRVAKTELEQASQAKEEIESELTAVREE-----QQLVQERSRE 122 S L++ QL+ + K+ E ++ EI L + + QQLV+ + E Sbjct: 563 SNELKKVQDQLEKLNNLNITTKSNYENKISSQNEIVKALVSENDTLKQRIQQLVEIKENE 622 Query: 123 LNRNYTKALQLLRRVSEQSRNLRQEVANLSAERAQLNEQKDXXXXXXXXXXXXVKLRDQE 182 +++T L+ ++ +EQ + L EV L A +L EQ ++ Sbjct: 623 -QKDHTTKLEAFQKNNEQLQKLNVEVVQLKAHELELEEQ------------------NRH 663 Query: 183 LSKRQERIAQQEKVLARQREQVQSLEKRFASLEAQRQQLQAEINQRDTKIDQLDQAIAAK 242 L E+ +E + V++L+++ L++++Q + AE + ++ L++ Sbjct: 664 LKNCLEK---KETGVEESLSDVKTLKQQVIVLKSEKQDITAEKLELQDNLESLEEVT--- 717 Query: 243 DNDIQAREEKLQGLETELSFLQREVEELERYYQDYQELRGQQ 284 + ++K+Q + EL +E+EE++ + ++ +G Q Sbjct: 718 ----KNLQQKVQSQKRELEQKIKELEEIKNHKRNEPSKKGTQ 755 Score = 42.7 bits (99), Expect = 2e-06 Identities = 48/272 (17%), Positives = 114/272 (41%), Gaps = 34/272 (12%) Query: 42 RQTAVLLTVITGTLISASTLGILFTFSKSLREGVFQLDDILAQLRVAKTEL-----EQAS 96 R T V L+ T T++ I + + ++ + +L V + L E+ Sbjct: 388 RNTTVELSSNTETMLKQQYEDIKENLEQKMSSSKDEMAKTINELSVTQKGLIMGVQEELL 447 Query: 97 QAKEEIESELTA-VREEQQLVQERSRELNRNYTKALQLLRRVSE---QSRNLRQEVANLS 152 + I++ L + + +Q + + + + +NY L++ QS + + +L Sbjct: 448 TSSGNIQTALVSEMNNTRQELLDDASQTAKNYASLENLVKAYKAEIVQSNEYEERIKHLE 507 Query: 153 AERAQLNEQKDXXXXXXXXXXXX-----------------VKLRDQELSKRQERIAQQEK 195 +ER+ L+ QK+ + ++Q L+++ E ++ + K Sbjct: 508 SERSTLSSQKNQIISSLGTKEAQYEDLVKKLEAKNIEISQISGKEQSLTEKNENLSNELK 567 Query: 196 VLARQREQVQSLEKRFAS-----LEAQRQQLQAEINQRDTKIDQLDQAIAAKDNDIQARE 250 + Q E++ +L S + +Q + ++A +++ DT ++ Q + K+N+ + Sbjct: 568 KVQDQLEKLNNLNITTKSNYENKISSQNEIVKALVSENDTLKQRIQQLVEIKENEQKDHT 627 Query: 251 EKLQGLETELSFLQR---EVEELERYYQDYQE 279 KL+ + LQ+ EV +L+ + + +E Sbjct: 628 TKLEAFQKNNEQLQKLNVEVVQLKAHELELEE 659 >SYNE-PCC-01-001071 sll1583 Length = 562 Score = 42.7 bits (99), Expect = 2e-06 Identities = 50/227 (22%), Positives = 99/227 (43%), Gaps = 27/227 (11%) Query: 62 GILFTFSKSLREGVFQLDDILAQLRVAKTELEQASQAKEEIESELTAVREEQQLVQERS- 120 G L K L+ L++ LA+ + +L + QA+E++ + L +Q Sbjct: 75 GKLRRLEKDLQSVQASLENALAE----RNQLTENYQAQEKMVAALQHQLAHYDDIQSEKF 130 Query: 121 ---RELNRNYTKALQLLRRVSEQSRNLRQEVANLSAERAQLNEQKDXXXXXXXXXXXXVK 177 ++LN+ +LL+ + S L+Q V ++ R +L + Sbjct: 131 VGLQKLNQ------ELLQENTNLSDRLKQAVNEVAETRPKLVQLNSLVTRNQQLSDQLSY 184 Query: 178 LRDQELSKRQERIAQQEKVLARQREQVQSL--------EKRFASLEAQRQQLQAEIN--- 226 + + ++R+A QEK+ ++ EQ Q+ E++ L A+R Q+Q E+ Sbjct: 185 VEQNQAKAIEQRLASQEKLWQQRHEQEQAQWNSQASQWEEQVRQLTAERDQVQQELQTAR 244 Query: 227 -QRDTKIDQLDQAIAAKDNDIQAREEKLQGLETELSFLQREVEELER 272 Q + Q + AA D + +EE+ QG ++L+ ++EE ++ Sbjct: 245 QQSQSAQTQAENLQAALDR-LGQQEEQWQGERSQLTAKLNQLEEAQK 290 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.316 0.132 0.339 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,502 Number of Sequences: 78 Number of extensions: 1953 Number of successful extensions: 120 Number of sequences better than 1.0e-05: 9 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 31 Number of HSP's gapped (non-prelim): 56 length of query: 491 length of database: 48,235 effective HSP length: 66 effective length of query: 425 effective length of database: 43,087 effective search space: 18311975 effective search space used: 18311975 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 94 (40.8 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-000983 sll1473 (481 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-000983 sll1473 919 0.0 SYNE-PCC-01-002220 slr1212 128 4e-32 SYNE-PCC-01-000542 sll0821 119 2e-29 SYNE-PCC-01-002778 slr1969 88 7e-20 SYNE-PCC-01-001517 slr0222 62 4e-12 SYNE-PCC-01-002617 slr1759 60 1e-11 SYNE-PCC-01-002873 slr2098 46 2e-07 SYNE-PCC-01-001690 slr0473 43 2e-06 >SYNE-PCC-01-000983 sll1473 Length = 481 Score = 919 bits (2375), Expect = 0.0 Identities = 469/481 (97%), Positives = 469/481 (97%) Query: 1 MGKFLIPIEFVFLAIAMTCYLWHRQNQERRRIEISIKQQTQRERFINQITQHIRQSLNLE 60 MGKFLIPIEFVFLAIAMTCYLWHRQNQERRRIEISIKQQTQRERFINQITQHIRQSLNLE Sbjct: 1 MGKFLIPIEFVFLAIAMTCYLWHRQNQERRRIEISIKQQTQRERFINQITQHIRQSLNLE 60 Query: 61 TVLNTTVAEVKTLLQVDRVLIYRIWQDGTGSAITESVNANYPSILGRTFSDEVFPVEYHQ 120 TVLNTTVAEVKTLLQVDRVLIYRIWQDGTGSAITESVNANYPSILGRTFSDEVFPVEYHQ Sbjct: 61 TVLNTTVAEVKTLLQVDRVLIYRIWQDGTGSAITESVNANYPSILGRTFSDEVFPVEYHQ 120 Query: 121 AYTKGKVRAINDIDQDDIEICLADFVKQFGVKSKLVVPILQHNRASSLDNESEFPYLWGL 180 AYTKGKVRAINDIDQDDIEICLADFVKQFGVKSKLVVPILQHNRASSLDNESEFPYLWGL Sbjct: 121 AYTKGKVRAINDIDQDDIEICLADFVKQFGVKSKLVVPILQHNRASSLDNESEFPYLWGL 180 Query: 181 LITHQCAFTRPWQPWEVELMKQLANQVAIAIXXXXXXXXXXXXNKDLENRVEKRTQQLAA 240 LITHQCAFTRPWQPWEVELMKQLANQVAIAI NKDLENRVEKRTQQLAA Sbjct: 181 LITHQCAFTRPWQPWEVELMKQLANQVAIAIQQSELYEQLQQLNKDLENRVEKRTQQLAA 240 Query: 241 TNQSLRMEISERQKTEAALRHTNHTLQSLIAASPRGIFTLNLADQIQIWNPTAERIFGWT 300 TNQSLRMEISERQKTEAALRHTNHTLQSLIAASPRGIFTLNLADQIQIWNPTAERIFGWT Sbjct: 241 TNQSLRMEISERQKTEAALRHTNHTLQSLIAASPRGIFTLNLADQIQIWNPTAERIFGWT 300 Query: 301 ETEIIAHPELLTSNILLEDYQQFKQKVLSGMVSPSLELKCQKKDGSWIEIVLSAAPLLDS 360 ETEIIAHPELLTSNILLEDYQQFKQKVLSGMVSPSLELKCQKKDGSWIEIVLSAAPLLDS Sbjct: 301 ETEIIAHPELLTSNILLEDYQQFKQKVLSGMVSPSLELKCQKKDGSWIEIVLSAAPLLDS 360 Query: 361 EENIAGLVAVVADITEQKRQAEQIRLLQSVVVNTNDAVVITEAEPIDDPGPRILYVNEAF 420 EENIAGLVAVVADITEQKRQAEQIRLLQSVVVNTNDAVVITEAEPIDDPGPRILYVNEAF Sbjct: 361 EENIAGLVAVVADITEQKRQAEQIRLLQSVVVNTNDAVVITEAEPIDDPGPRILYVNEAF 420 Query: 421 TKITGYTAEEMLGKTPRVLQGPKTSRTELDRVRQAISQWQSVTVEAEVLNDSYKEKKSPL 480 TKITGYTAEEMLGKTPRVLQGPKTSRTELDRVRQAISQWQSVTVEAEVLNDSYKEKKSPL Sbjct: 421 TKITGYTAEEMLGKTPRVLQGPKTSRTELDRVRQAISQWQSVTVEAEVLNDSYKEKKSPL 480 Query: 481 K 481 K Sbjct: 481 K 481 >SYNE-PCC-01-002220 slr1212 Length = 844 Score = 128 bits (321), Expect = 4e-32 Identities = 74/239 (30%), Positives = 122/239 (51%), Gaps = 29/239 (12%) Query: 33 EISIKQQTQRERFINQITQHIRQSLNLETVLNTTVAEVKTLLQVDRVLIYRIWQD---GT 89 E + +Q +RE + +ITQ IRQSL+L T+ NT V E++ L+ DRV+I++ D Sbjct: 450 EQRLYEQGRRESLLREITQRIRQSLDLPTIFNTVVQEIRQFLEADRVVIFQFSPDSDFSV 509 Query: 90 GSAITESVNANYPSILGRTFSDEVFPVEYHQAYTKGKVRAINDIDQDDIEICLADFVKQF 149 G+ + ESV A + I+ + F Y Q Y +G+++ I DI Q + C DF+ + Sbjct: 510 GNIVAESVLAPFKPIINSAIEETCFSNNYAQRYQQGRIQVIEDIHQSHLRQCHIDFLARL 569 Query: 150 GVKSKLVVPILQHNRASSLDNESEFPYLWGLLITHQCAFTRPWQPWEVELMKQLANQVAI 209 V++ LV+P++ LWGLL HQC +R W+ E++L+KQ+ NQ I Sbjct: 570 QVRANLVLPLIND------------AILWGLLCIHQCDSSRVWEQTEIDLLKQITNQFEI 617 Query: 210 AIXXXXXXXXXXXXNKDLENRVEKRTQQLAATNQSLRMEISERQKTEAALRHTNHTLQS 268 AI E+ Q+LA+ NQ +E ++ + L+ +H +++ Sbjct: 618 AIQQATL--------------YEQAQQELASKNQLFVQLTNELEQKKVLLKEIHHRVKN 662 Score = 93.6 bits (231), Expect = 1e-21 Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 13/215 (6%) Query: 224 NKDLENRVEKRTQQLAATNQSLRMEISERQKTEAALRHTNHTLQSLIA---ASPRGIFTL 280 N +LE RVE RT QLA NQ L EI ++ + + L L L A +S I + Sbjct: 156 NNNLEKRVEDRTTQLAKINQQLEQEIEDKTRAKEDLEKNKDQLAQLAAIVESSQDAIISK 215 Query: 281 NLADQIQIWNPTAERIFGWTETEIIAH--PELLTSNILLEDYQQFKQKVLSGMVSPSLEL 338 L I WN +AER+FG+T E+I +L+ ++LE+ + + G + E Sbjct: 216 TLDGNITSWNESAERLFGYTAEEMIGSHITKLIPEELILEE-DLIAECIRQGQRINTYET 274 Query: 339 KCQKKDGSWIEIVLSAAPLLDSEENIAGLVAVVADITEQKRQAEQIRLLQSVV---VNTN 395 + Q+KDG+ I++ L+ +P+ D +N+ G +V DIT + +R Q + N + Sbjct: 275 QRQRKDGTKIDVALTISPIRDEHKNVVGASKIVRDITARLDVENALRESQYFIEKLANYS 334 Query: 396 DAVVITEAEPIDDPGPRILYVNEAFTKITGYTAEE 430 ++ +D + +YVN +I GYT EE Sbjct: 335 PQILYI----LDPIAWKNIYVNYQSFEILGYTPEE 365 >SYNE-PCC-01-000542 sll0821 Length = 1276 Score = 119 bits (298), Expect = 2e-29 Identities = 63/190 (33%), Positives = 107/190 (56%), Gaps = 12/190 (6%) Query: 22 WHRQNQERRRIEISIKQQTQRERFINQITQHIRQSLNLETVLNTTVAEVKTLLQVDRVLI 81 W + + ++ ++Q+ +E+ + +I IR SLN+ +L +TV EV+ L DRV++ Sbjct: 903 WTEKLHDYVLLKERLQQRNVKEKLVLKIANKIRASLNINDILYSTVTEVRQFLNTDRVVL 962 Query: 82 YRIWQDGTGSAITESVNANYPSILGRTFSDEVFPVEYHQAYTKGKVRAINDIDQDDIEIC 141 ++ +G +TES N SI+ D F Y + Y +G+VRA++DI++ D+ C Sbjct: 963 FKFNSQWSGQVVTESHNDFCRSIINDEIDDPCFKGHYLRLYREGRVRAVSDIEKADLADC 1022 Query: 142 LADFVKQFGVKSKLVVPILQHNRASSLDNESEFPYLWGLLITHQCAFTRPWQPWEVELMK 201 + ++ + VK+ LVVP++ + LWGLLI H+C R WQ +++L+ Sbjct: 1023 HKELLRHYQVKANLVVPVVFNEN------------LWGLLIAHECKTPRYWQEEDLQLLM 1070 Query: 202 QLANQVAIAI 211 +LA QVAIAI Sbjct: 1071 ELATQVAIAI 1080 Score = 61.6 bits (148), Expect = 5e-12 Identities = 49/192 (25%), Positives = 78/192 (40%), Gaps = 36/192 (18%) Query: 43 ERFINQITQHIRQSLNLETVLNTTVAEVKTLLQVDRVLIYRIWQDGTGSAITESVN-ANY 101 E F+ + ++L L L V E + L VDRV IY+ DG+G + E+VN A Sbjct: 8 EDFLRNVINKFHRALTLRETLQVIVEEARIFLGVDRVKIYKFASDGSGEVLAEAVNRAAL 67 Query: 102 PSILGRTFSDEVFPVEYHQAYTKGKVRAINDI----------------------DQDDIE 139 PS+LG F E P + + + D+ ++ Sbjct: 68 PSLLGLHFPVEDIPPQAREELGNQRKMIAVDVAHRRKKSHELSGRISPTEHSNGHYTTVD 127 Query: 140 ICLADFVKQFGVKSKLVVPILQHNRASSLDNESEFPYLWGLLITHQCAFTRPWQPWEVEL 199 C ++ GV S L VP++Q + LWG++ H + R + E E Sbjct: 128 SCHIQYLLAMGVLSSLTVPVMQDQQ------------LWGIMAVHH-SKPRRFTEQEWET 174 Query: 200 MKQLANQVAIAI 211 M L+ +V++AI Sbjct: 175 MALLSKEVSLAI 186 >SYNE-PCC-01-002778 slr1969 Length = 750 Score = 87.8 bits (216), Expect = 7e-20 Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 35/226 (15%) Query: 39 QTQRERFINQITQHIRQSLNLETVLNTTVAEVKTLLQVDRVLIYRIWQDGTGSAITESVN 98 Q + + ++Q+ IRQSL+L +LN V V+ L VDR++IY+ E Sbjct: 155 QASQVKLLSQVIAQIRQSLDLSEILNNAVTAVQKFLFVDRLVIYQFHYSQPSLTPLEENQ 214 Query: 99 ANYP--------------------SILGRTFSDEVFP--VEYHQAYTKGKVRAINDIDQD 136 P ++LG ++ F Y Q Y KG V A++DI+ Sbjct: 215 IPAPRPRQQYGEVTYEARRSPEIDTMLGIMTENDCFSQVFSYEQKYLKGAVVAVSDIENH 274 Query: 137 -DIEICLADFVKQFGVKSKLVVPILQHNRASSLDNESEFPYLWGLLITHQCAFTRPWQPW 195 CL ++++ V++KLV PI+ + LWGLLI HQC R W Sbjct: 275 YSSSYCLVGLLQRYQVRAKLVAPIIVEGQ------------LWGLLIAHQCHHPRQWLDS 322 Query: 196 EVELMKQLANQVAIAIXXXXXXXXXXXXNKDLENRVEKRTQQLAAT 241 E + Q+ +A+AI + E RV +RT++L T Sbjct: 323 EKNFLGQIGEHLAVAIVQSLLYSEVQKQKNNFEKRVIERTKELRDT 368 >SYNE-PCC-01-001517 slr0222 Length = 1178 Score = 62.0 bits (149), Expect = 4e-12 Identities = 63/243 (25%), Positives = 117/243 (48%), Gaps = 34/243 (13%) Query: 243 QSLRMEISERQKTEAALRHTNHTLQSLIAASPRGIFTLNLADQIQ-----IWNPTAERIF 297 Q + +I+ ++ +A L+ N+ + L+ G+F +Q +WNP + I Sbjct: 656 QCIVHDITLQKTIQAQLQRENYFRRQLLEKMVEGLFVCYEVEQFPFLQFTVWNPMMKNIT 715 Query: 298 GWTETEI--IAHPELLTSNILLEDYQQFKQKVLS-GMVSPSLELKCQKKDGSWIEIVLSA 354 G+++ EI E L S+ ++ + + K ++ G+ E + ++DG+ + +S Sbjct: 716 GYSQEEINQCGWYETLYSHGQPQEAVRVRMKAVALGVDMVKEEWQIIRRDGALRTVEIST 775 Query: 355 APLLDSEENIAGLVAVVADITEQKRQAEQIRLLQSVVVNTNDAVV--ITEAEPIDDPGPR 412 A L + N ++AV+ DIT+QKRQ + ++ N+A + I E PI G R Sbjct: 776 A--LITSNNQTNILAVIQDITDQKRQLQ--------IIQNNEATLRCIVENLPIFF-GMR 824 Query: 413 IL------YVNEAFTKITGYTAEEMLGKTPRVLQGPKTSRTE----LDRVRQAISQWQSV 462 + Y+N +F +TGYT +EM + P + Q K R E L++ R + +W Sbjct: 825 TINFSNWYYINPSFESLTGYTPDEMY-EDPLLWQ--KIHREEYAENLEQARPNLGEWTIF 881 Query: 463 TVE 465 ++E Sbjct: 882 SME 884 Score = 56.6 bits (135), Expect = 2e-10 Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 20/220 (9%) Query: 224 NKDLENRVEKRTQQLAATNQSLRMEISERQKTEAALRHTNHTLQSLIAASPRGIFTLNLA 283 N++LE +E+RT +L ++N L EI E+++ L ++L+ + I + + Sbjct: 511 NENLEVLIEERTSELESSNSQLLQEIIEKEQVSITLTTQEAKYRALVRDAGDAIILITID 570 Query: 284 DQIQIWNPTAERIFGWTETEIIAHPELLTSNILLEDY----QQFKQKVLSGMVSPSLELK 339 + N A + G+ + E+I H LL +L ++ + F + + +S +++ Sbjct: 571 FIVLEVNYRAVELSGYDQEELIGH-SLLDLRLLTPEFYAQQRHFWRTLKREQISQLTDVR 629 Query: 340 CQKKDGSWIEIVLSAAPLLDSEENIAGLVAVVADITEQKRQAEQI--------RLLQSVV 391 KK G I + +SA+ + + EN + + +V DIT QK Q+ +LL+ +V Sbjct: 630 LVKKSGELISVDISASVI--TYENHSIVQCIVHDITLQKTIQAQLQRENYFRRQLLEKMV 687 Query: 392 VNTNDAVVITEAEPIDDPGPRILYVNEAFTKITGYTAEEM 431 V E E P + N ITGY+ EE+ Sbjct: 688 ---EGLFVCYEVEQF--PFLQFTVWNPMMKNITGYSQEEI 722 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 60.5 bits (145), Expect = 1e-11 Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 21/223 (9%) Query: 28 ERRRIEISIKQQTQRERFINQITQHIRQSLNLETVLNTTVAEVKTLLQVDRVLIYRIWQD 87 +R++ + ++++ + + +I+Q IR+SL + T +V + V R LI+ + Sbjct: 570 DRKQAQDILQKKLNQILLMRKISQEIRRSLQPTLIFQTAARQVGNVFAVSRCLIHNYSEA 629 Query: 88 GTGSA--ITESVNANYPSILGRTFSDEVFPVEYHQAYTKG-KVRAINDIDQDDIEICLAD 144 T + E + + S+L + E Y +G + A+ D+DQD Sbjct: 630 TTLQVPVVAEYLGGQFTSLLAGEIAVEQ---AYDPTIIQGDRAMAVVDLDQDLNSTHTKA 686 Query: 145 FVKQFGVKSKLVVPILQHNRASSLDNESEFPYLWGLLITHQCAFTRPWQPWEVELMKQLA 204 F ++F VKS L V +A+ G++ HQC R W E+EL++ +A Sbjct: 687 FYQRFQVKSFLAVRTSYQGKAN------------GIIALHQCDRQRVWTADEIELLEAIA 734 Query: 205 NQVAIAIXXXXXXXXXXXXNKDLENR---VEKRTQQLAATNQS 244 Q+ IA+ ++L + +EK T A N++ Sbjct: 735 EQMGIALAQAALLEKERERRRELAQKNLELEKATWAAEAANRA 777 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 46.2 bits (108), Expect = 2e-07 Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 14/166 (8%) Query: 248 EISERQKTEAALRHTNHTLQSLIAASPRGIFTLNLADQIQIWNPTAERIFGWTETEIIAH 307 EIS + + + L T + +I +P GI L+ I + N + E++FG+++TE+I Sbjct: 254 EISIQNQQQKILVATESWYRQIIEYAPEGIMVLDAQGNIILANTSIEKLFGYSQTELIGQ 313 Query: 308 PELL--TSNILLEDYQQFKQKVLSGMVSP----SLELKCQKKDGSW--IEIVLSAAPLLD 359 L + +L + ++ G P E+ + DGS IE+ L++ P L Sbjct: 314 SIALLGLAELLQQSLHLLQEGEDVGPTCPLDQEEFEILGTRYDGSEFPIEVSLTSLPSLS 373 Query: 360 SEENIAGLVAVVADITEQKRQAEQI----RLLQSVVVNTNDAVVIT 401 E + A V DI+ ++ +QI LQSV+ + V IT Sbjct: 374 QRE--MNIFASVRDISARQEAQQQILRQREHLQSVLDSAPVGVAIT 417 >SYNE-PCC-01-001690 slr0473 Length = 748 Score = 42.7 bits (99), Expect = 2e-06 Identities = 32/162 (19%), Positives = 58/162 (35%), Gaps = 36/162 (22%) Query: 47 NQITQHIRQSLNLETVLNTTVAEVKTLLQVDRVLIYRIWQDGTGSAITESVNANYPSILG 106 N +RQ NL + V EV+ + DRV++YR ++ G I E + LG Sbjct: 141 NAALNRLRQQANLRDFYDVIVEEVRRMTGFDRVMLYRFDENNHGDVIAEDKRDDMEPYLG 200 Query: 107 RTFSDEVFPVEYHQAYTKGKVRAINDIDQDDIEI------------------------CL 142 + + P + + +R I D+ + + C Sbjct: 201 LHYPESDIPQPARRLFIHNPIRVIPDVYGVAVPLTPAVNPSTNRAVDLTESILRSAYHCH 260 Query: 143 ADFVKQFGVKSKLVVPILQHNRASSLDNESEFPYLWGLLITH 184 ++K GV + L + +++ +LWGL+ H Sbjct: 261 LTYLKNMGVGASLTISLIKDG------------HLWGLIACH 290 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.318 0.132 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,578 Number of Sequences: 78 Number of extensions: 1913 Number of successful extensions: 52 Number of sequences better than 1.0e-05: 8 Number of HSP's better than 0.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 20 Number of HSP's gapped (non-prelim): 20 length of query: 481 length of database: 48,235 effective HSP length: 66 effective length of query: 415 effective length of database: 43,087 effective search space: 17881105 effective search space used: 17881105 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 94 (40.8 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-000985 sll1475 (297 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-000985 sll1475 550 e-159 SYNE-PCC-01-001517 slr0222 167 4e-44 SYNE-PCC-01-000295 sll0474 122 2e-30 SYNE-PCC-01-000891 sll1353 108 3e-26 SYNE-PCC-01-002778 slr1969 102 1e-24 SYNE-PCC-01-001509 slr0210 101 3e-24 SYNE-PCC-01-001280 sll1871 101 3e-24 SYNE-PCC-01-001132 sll1672 99 2e-23 SYNE-PCC-01-002879 slr2104 97 6e-23 SYNE-PCC-01-000800 sll1228 96 2e-22 SYNE-PCC-01-002873 slr2098 95 3e-22 SYNE-PCC-01-001306 sll1905 91 4e-21 SYNE-PCC-01-001294 sll1888 81 4e-18 SYNE-PCC-01-002617 slr1759 80 8e-18 SYNE-PCC-01-001690 slr0473 72 2e-15 >SYNE-PCC-01-000985 sll1475 Length = 297 Score = 550 bits (1417), Expect = e-159 Identities = 280/297 (94%), Positives = 280/297 (94%) Query: 1 MRFNDSAVEVINYRKDGSEFWVEFSLVPVANKTGFYTHWIAVQRDXXXXXXXXXXXXXXX 60 MRFNDSAVEVINYRKDGSEFWVEFSLVPVANKTGFYTHWIAVQRD Sbjct: 1 MRFNDSAVEVINYRKDGSEFWVEFSLVPVANKTGFYTHWIAVQRDVTERRRTEEVRLALE 60 Query: 61 XXKELSRLKTRFFSMASHEFRTPLSTALAAAQLLENSEVAWLDPDKRSRNLHRIQNSVKN 120 KELSRLKTRFFSMASHEFRTPLSTALAAAQLLENSEVAWLDPDKRSRNLHRIQNSVKN Sbjct: 61 REKELSRLKTRFFSMASHEFRTPLSTALAAAQLLENSEVAWLDPDKRSRNLHRIQNSVKN 120 Query: 121 MVQLLDDILIINRAEAGKLEFNPNWLDLKLLFQQFIEEIQLSVSDQYYFDFICSAQDTKA 180 MVQLLDDILIINRAEAGKLEFNPNWLDLKLLFQQFIEEIQLSVSDQYYFDFICSAQDTKA Sbjct: 121 MVQLLDDILIINRAEAGKLEFNPNWLDLKLLFQQFIEEIQLSVSDQYYFDFICSAQDTKA 180 Query: 181 LVDERLVRSILSNLLSNAIKYSPGGGQIKIALSLDSEQIIFEVTDQGIGISPEDQKQIFE 240 LVDERLVRSILSNLLSNAIKYSPGGGQIKIALSLDSEQIIFEVTDQGIGISPEDQKQIFE Sbjct: 181 LVDERLVRSILSNLLSNAIKYSPGGGQIKIALSLDSEQIIFEVTDQGIGISPEDQKQIFE 240 Query: 241 PFHRGKNVRNITGTGLGLMVAKKCVDLHSGSILLKSAVDQGTTVTICLKRYNHLPRA 297 PFHRGKNVRNITGTGLGLMVAKKCVDLHSGSILLKSAVDQGTTVTICLKRYNHLPRA Sbjct: 241 PFHRGKNVRNITGTGLGLMVAKKCVDLHSGSILLKSAVDQGTTVTICLKRYNHLPRA 297 >SYNE-PCC-01-001517 slr0222 Length = 1178 Score = 167 bits (423), Expect = 4e-44 Identities = 91/227 (40%), Positives = 142/227 (62%), Gaps = 2/227 (0%) Query: 63 KELSRLKTRFFSMASHEFRTPLSTALAAAQLLENSEVAWLDPDKRSRNLHRIQNSVKNMV 122 +EL+ K++F + SHEFRTPL++ + +LL + L +K+ + ++ IQNS + + Sbjct: 934 RELNEAKSQFVDIVSHEFRTPLTSIIGFGELL-SKYFDRLSTEKKQQYINNIQNSSQRLK 992 Query: 123 QLLDDILIINRAEAGKLEFNPNWLDLKLLFQQFIEEIQLSVSDQYYFDFICSAQ-DTKAL 181 QL+DD+L I+R +A K+E ++L+ L IE + ++ F+ + D +L Sbjct: 993 QLIDDVLSISRYDANKIEIELGNINLRNLANDLIENFSCGLGSEHNFELNYHLKPDEHSL 1052 Query: 182 VDERLVRSILSNLLSNAIKYSPGGGQIKIALSLDSEQIIFEVTDQGIGISPEDQKQIFEP 241 VD RL+R IL N+LSNAIKYS G I + +S D E ++F+V D+GIGI +DQ+++FE Sbjct: 1053 VDVRLLRHILENILSNAIKYSAPGSTITLDISKDEEHLLFQVRDEGIGIPLQDQEKLFEA 1112 Query: 242 FHRGKNVRNITGTGLGLMVAKKCVDLHSGSILLKSAVDQGTTVTICL 288 FHR NV +I GTGLGL + K+ V+ G+I + S +GTT+ I L Sbjct: 1113 FHRASNVGDIPGTGLGLSIVKRYVEFQGGTIEVISMPGKGTTMVIKL 1159 >SYNE-PCC-01-000295 sll0474 Length = 806 Score = 122 bits (305), Expect = 2e-30 Identities = 81/242 (33%), Positives = 136/242 (56%), Gaps = 26/242 (10%) Query: 66 SRLKTRFFSMASHEFRTPLSTALAAAQLLENSEVAWLDPDKRSRNLHRIQNSVKNMVQLL 125 ++LK F + SHE RTPL++ L + L+N L+ K+ ++L ++NS ++++ L+ Sbjct: 415 TQLKDEFLANMSHELRTPLNSILGMIETLQNQVYGPLN-GKQVQSLEIVENSGRHLLSLI 473 Query: 126 DDILIINRAEAGKLEFNPNWLDLKLLF-------QQFIEEIQLSVSDQYYFDFICSAQDT 178 +DIL +++ EAG+++ + N + L QQF + Q+++S + I + D Sbjct: 474 NDILDLSKIEAGRMDLDLNPTSVSALVNHSLTFVQQFAIQKQINLSSE----IIPNLPDV 529 Query: 179 KALVDERLVRSILSNLLSNAIKYSPGGGQIKIALSLDSE----------QIIFEVTDQGI 228 LVD+R + +L NLL+NAIK++P GG++ + L E Q+ F V D GI Sbjct: 530 --LVDKRRLCQVLINLLNNAIKFTPEGGKVVVQADLIKEQGKENSQSPPQLSFTVFDTGI 587 Query: 229 GISPEDQKQIFEPFHRGKNV--RNITGTGLGLMVAKKCVDLHSGSILLKSAVDQGTTVTI 286 GI + IFEPF + + R GTGLGL + KK V+LH GS+ + S +++G+ I Sbjct: 588 GIEADRLNNIFEPFVQIDSALNRRYDGTGLGLSLVKKIVELHGGSVTVTSKLNEGSRFKI 647 Query: 287 CL 288 + Sbjct: 648 TI 649 >SYNE-PCC-01-000891 sll1353 Length = 998 Score = 108 bits (269), Expect = 3e-26 Identities = 74/231 (32%), Positives = 123/231 (53%), Gaps = 17/231 (7%) Query: 66 SRLKTRFFSMASHEFRTPLSTALAAAQLLENSEVAWLDPDKRSRNLHRIQNSVKNMVQLL 125 +R+K+ F + SHE RTP++ L LL + L + + L+ I +S K ++ L+ Sbjct: 597 NRVKSEFLANISHEIRTPMNAILGFCDLLLQKD---LSLSQTKKYLNAIGSSSKILLALI 653 Query: 126 DDILIINRAEAGKLEFNPNWLDLKLLFQQFIEEIQLSVSDQYYFDFICSAQDTKALV--D 183 DDIL I++ EAGKL + +DL+++ ++ + + I + + D Sbjct: 654 DDILDISKIEAGKLVIHLEPVDLRVIIREIKQIFDYKAESKSLLLTIQIDETLNQAIYFD 713 Query: 184 ERLVRSILSNLLSNAIKYSPGGGQIKIALSLDSEQI---------IFEVTDQGIGISPED 234 +R IL NL+ NA+K++ G Q+ I + ++ Q+ EVTD GIGI+PED Sbjct: 714 AVRLRQILFNLVGNALKFTEEG-QVFIYIGVEGIQVRSQGTYISLAIEVTDTGIGIAPED 772 Query: 235 QKQIFEPF--HRGKNVRNITGTGLGLMVAKKCVDLHSGSILLKSAVDQGTT 283 Q +IF+ F +G++ R GTGLGL + ++ L G I L S + +G+T Sbjct: 773 QAKIFDVFTQSQGQSTRKYGGTGLGLTITRRLTALLGGEISLSSRLGEGST 823 >SYNE-PCC-01-002778 slr1969 Length = 750 Score = 102 bits (255), Expect = 1e-24 Identities = 72/235 (30%), Positives = 123/235 (52%), Gaps = 7/235 (2%) Query: 68 LKTRFFSMASHEFRTPLST--ALAAAQLLENSEVAWLDPDKRSRNLHRIQNSVKNMVQLL 125 LK++F + SHE RTPL++ L+A L A L P K+ L IQ + K ++ + Sbjct: 378 LKSQFINNISHELRTPLTSIIGLSATLLRWFDHPASLPPAKQQYYLLNIQENGKKLLDQI 437 Query: 126 DDILIINRAEAGKLEFNPNWLDLKLLFQQFIEEIQ-LSVSDQYYF--DFICSAQDTKALV 182 + I+ +++ E+G+ N L L Q I + +++ Q D+ + + Sbjct: 438 NSIIQLSQLESGQTALNCQSFSLHTLAQTVIHSLLGVAIKQQINLELDYQINVGQDQFCA 497 Query: 183 DERLVRSILSNLLSNAIKYSPGGGQIKIALSLDSEQIIFEVTDQGIGISPEDQKQIFEPF 242 D+ + IL+ LL+NA+K++P G + + + +S Q IF+V D GIGI+ + +FE F Sbjct: 498 DQERLDQILTQLLNNALKFTPAEGTVILRIWKESNQAIFQVEDTGIGINEQQLPVLFEAF 557 Query: 243 H-RGKNVRNITGT-GLGLMVAKKCVDLHSGSILLKSAVDQGTTVTICLKRYNHLP 295 G + + T G+GL + K+ V+LH G I ++S+ QGT T + + N P Sbjct: 558 KVAGDSYTSFYETGGVGLALTKQLVELHGGYIEVESSPGQGTIFTTVIPQQNFPP 612 >SYNE-PCC-01-001509 slr0210 Length = 417 Score = 101 bits (251), Expect = 3e-24 Identities = 66/214 (30%), Positives = 113/214 (52%), Gaps = 5/214 (2%) Query: 78 HEFRTPLSTALAAAQLLENSEVAWLDPDKRSRNLHRIQNSVKNMVQLLDDILIINRAEAG 137 HEFRTPL+ + A++L + L+P K+ + + NS ++++ L++D L +++ +A Sbjct: 195 HEFRTPLTAIIGFARMLRDELYGKLNP-KQHQYVQGTLNSAEHLLSLVNDFLDLSKIDAR 253 Query: 138 KLEFNPNWLDLKLLFQQFIEEIQLSVSD-QYYFDFICSAQDTKALVDERLVRSILSNLLS 196 E + ++ L I +Q + Q + VD+R + IL NLLS Sbjct: 254 CEELFYEQVAVEDLCLAVISMVQTKAKEKQLALNLTIDDGVDFCYVDQRRWKQILINLLS 313 Query: 197 NAIKYSPGGGQIKIALSLDSEQIIFEVTDQGIGISPEDQKQIFEPFHRGKNVRNIT--GT 254 N +K++P G + +A+ + +IF V D GIGI PEDQ+ +F+PF + + + GT Sbjct: 314 NGVKFTPKGS-VTLAVKATDKALIFSVIDTGIGIDPEDQRDLFQPFKQISHPPSFAEKGT 372 Query: 255 GLGLMVAKKCVDLHSGSILLKSAVDQGTTVTICL 288 GLGL ++++ LH G I L S G+ + L Sbjct: 373 GLGLALSRRLAQLHGGDIQLTSTPGVGSCFSAIL 406 >SYNE-PCC-01-001280 sll1871 Length = 674 Score = 101 bits (251), Expect = 3e-24 Identities = 73/235 (31%), Positives = 123/235 (52%), Gaps = 7/235 (2%) Query: 69 KTRFFSMASHEFRTPLSTALAAAQLLENSEVAWLDPDKRSRNLHRIQNSVKNMVQLLDDI 128 K+ F + SHE RTPL+ + +++L E LD ++ +L +I S K+++ L++D+ Sbjct: 438 KSIFLANMSHELRTPLNAIIGYSEMLIE-EAEDLDSEELVPDLDKILRSGKSLLALINDL 496 Query: 129 LIINRAEAGKLEFNPNWLDLKLLFQQFIEEIQ-LSVSDQYYFDFICSAQDTKALVDERLV 187 L I++ EAGK+E +LK L ++ I L ++ + S + + D + Sbjct: 497 LDISKIEAGKMELYLETFNLKELIAGILDTISPLLKNNNNKLEVEISLESEEVYGDLIKL 556 Query: 188 RSILSNLLSNAIKYSPGG--GQIKIALSLDSEQ-IIFEVTDQGIGISPEDQKQIFEPFHR 244 R + NLLSNA K++ G I +D + + F+V D GIG++ E ++F+PF + Sbjct: 557 RQGILNLLSNASKFTKDGIISFIVEEFKVDEKDWLSFQVKDTGIGLTEEQMSKLFQPFTQ 616 Query: 245 GKN--VRNITGTGLGLMVAKKCVDLHSGSILLKSAVDQGTTVTICLKRYNHLPRA 297 + R GTGLGL + +K + G I L S + G++ TI L +Y L A Sbjct: 617 ADSSTTRKYGGTGLGLAITRKFCQMMGGDIYLTSEIGVGSSFTIKLPKYAQLNSA 671 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 98.6 bits (244), Expect = 2e-23 Identities = 73/243 (30%), Positives = 121/243 (49%), Gaps = 23/243 (9%) Query: 66 SRLKTRFFSMASHEFRTPLSTALAAAQLLENSEVAWLDPDKRSRNLHRIQNSVKNMVQLL 125 ++ K+ F + SHE R+PL+ + +QL+ ++ P ++ N IQ S + ++ L+ Sbjct: 362 AKAKSTFVANMSHELRSPLNAIIGFSQLMLRTKNL---PMEQYENAGIIQRSGEYLLNLI 418 Query: 126 DDILIINRAEAGKLEFNPNWLDLKLLFQQFIEEIQLSVSDQYYFDFICSAQDTKALV--D 183 ++IL ++ EAGK N + DL LL + + L +++ D V D Sbjct: 419 NNILDFSKIEAGKTHLNRHNFDLYLLLDDLEDMLHLKAANEGIELIFIRDHDLPRYVYGD 478 Query: 184 ERLVRSILSNLLSNAIKYSPGGGQIKIALSLDSEQ-----------------IIFEVTDQ 226 E +R IL NLLSNAIK++ G + + ++EQ + F + D Sbjct: 479 EIKLRQILLNLLSNAIKFTTEGEVVLTSNFRNAEQQEVINPETSTEPKNKYWLDFTIKDT 538 Query: 227 GIGISPEDQKQIFEPFHRGKNVRNIT-GTGLGLMVAKKCVDLHSGSILLKSAVDQGTTVT 285 G GIS + +FE F + ++ RN GTGLGL + ++ + L G I + S VDQGTT + Sbjct: 539 GKGISEVELSHLFEAFSQTESGRNAQEGTGLGLAITRQFIKLMGGDINVSSVVDQGTTFS 598 Query: 286 ICL 288 + Sbjct: 599 FSI 601 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 97.1 bits (240), Expect = 6e-23 Identities = 71/235 (30%), Positives = 130/235 (55%), Gaps = 18/235 (7%) Query: 66 SRLKTRFFSMASHEFRTPLSTALAAAQLLENSEVAWLDPDKRSRN-LHRIQNSVKNMVQL 124 ++ K+ F + SHE RTP++ + ++L+ +++ + RN L ++Q + + ++ + Sbjct: 455 TKAKSEFLANMSHEIRTPMNAIIGMSELVLQTDLT-----SQQRNYLQKVQYAGELLLGI 509 Query: 125 LDDILIINRAEAGKLEFNPNWLDLKLLFQQFIEEIQLSVSDQ-YYFDFICSAQDTKALVD 183 +++IL ++ EAGKLE ++ + + + + +F + LV Sbjct: 510 INNILDFSKMEAGKLELEQKPFSVEEVMGNLHSILGIQAEAKGLTLNFHLDPRIPPILVG 569 Query: 184 ERL-VRSILSNLLSNAIKYSPGGGQIKIA---LSLDSEQ--IIFEVTDQGIGISPEDQKQ 237 +RL + IL NL +NA+K++ G+I I L ++EQ + F VTD GIG++P+ Q + Sbjct: 570 DRLRLSQILINLGNNAVKFT-NQGEITIRGQLLKTENEQTKLQFSVTDTGIGLTPDQQSK 628 Query: 238 IFEPFHRGK--NVRNITGTGLGLMVAKKCVDLHSGSILLKSAVDQGTT--VTICL 288 +F+ F++G+ R GTGLGL ++K +L G I L+S V QG+T T+CL Sbjct: 629 LFQWFNQGETSTSRQYGGTGLGLAISKSLTELMGGDIWLESVVGQGSTFHFTVCL 683 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 95.5 bits (236), Expect = 2e-22 Identities = 67/230 (29%), Positives = 122/230 (53%), Gaps = 17/230 (7%) Query: 66 SRLKTRFFSMASHEFRTPLSTALAAAQLLENSEVAWLDPDKRSRNLHRIQNSVKNMVQLL 125 +R KT F + SHE RTPL+ + +QLL L P + + ++ I S +++++L+ Sbjct: 160 NRAKTEFLASISHELRTPLNAIIGFSQLLHRDPS--LAPHRPTLDI--INRSGEHLLELI 215 Query: 126 DDILIINRAEAGKLEFNPNWLDLKLLFQQFIEEIQLSVSDQYYFDFICSAQDTKALV--D 183 +DIL +++ EAG+ N +D L QL ++ + + + + D Sbjct: 216 NDILEMSKIEAGRTTLNEKIIDCHRLLDNLQALFQLRAQEKQLLLKVERSPEVPEWIKTD 275 Query: 184 ERLVRSILSNLLSNAIKYSPGGG---QIKIALSLDSEQ-------IIFEVTDQGIGISPE 233 +R +L NLL+NAIK++ GG ++K + +++ + F V+D G GI+ Sbjct: 276 GGKLRQVLINLLANAIKFTAQGGVTLKVKCLTAPQTDEGQGASIWLHFLVSDTGPGIAAH 335 Query: 234 DQKQIFEPFHRGKN-VRNITGTGLGLMVAKKCVDLHSGSILLKSAVDQGT 282 + ++F PF + + +++ G GLGL +++K V L G I ++S VDQG+ Sbjct: 336 EMDELFVPFAQTETGLKSCQGNGLGLPISQKFVQLMGGQIQVRSKVDQGS 385 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 94.7 bits (234), Expect = 3e-22 Identities = 75/245 (30%), Positives = 123/245 (50%), Gaps = 18/245 (7%) Query: 63 KELSRLKTRFFSMASHEFRTPLSTALAAAQLLENSEVAWLDPDKRSRNLHRIQNSVKNMV 122 +E SR+K F + SHE RTP++ + L ++ L P +R LH+I+ S ++++ Sbjct: 521 EEASRIKADFLANMSHEIRTPMNAVIGMTHLALKTD---LTPRQREY-LHKIRFSGQHLL 576 Query: 123 QLLDDILIINRAEAGKLEFNPNWLDLKLLFQQ---FIEEIQLSVSDQYYFDFICSAQDTK 179 +++DIL ++ EAGKL DL + I E + + FD I Sbjct: 577 GVINDILDFSKIEAGKLPMESIDFDLDKVLDNVATLISEKATNKGLELLFD-IDRNLPRH 635 Query: 180 ALVDERLVRSILSNLLSNAIKYSPGGGQIKIALSL----DSEQIIF-EVTDQGIGISPED 234 + D + IL N +NA+K++ G I I + L D + +++ V D GIGI PE Sbjct: 636 FIGDPLRLGQILINYANNAVKFTEQG-DITIVVRLQEYRDQDVVLYLAVKDTGIGIKPEH 694 Query: 235 QKQIFEPFHRGKN--VRNITGTGLGLMVAKKCVDLHSGSILLKSAVDQGTT--VTICLKR 290 +F F + + RN GTGLGL + K+ +L G + ++S QG+T +CL++ Sbjct: 695 IANLFNSFQQADSSTTRNFGGTGLGLAICKRIAELMGGEVGVESEYGQGSTFWAKVCLQK 754 Query: 291 YNHLP 295 N +P Sbjct: 755 SNVIP 759 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 90.9 bits (224), Expect = 4e-21 Identities = 65/222 (29%), Positives = 111/222 (50%), Gaps = 16/222 (7%) Query: 66 SRLKTRFFSMASHEFRTPLSTALAAAQLLENSEVAWLDPDKRSRNLHRIQNSVKNMVQLL 125 +R K+ F + SHE RTP++ + LL ++++ ++ I+NS + ++ L+ Sbjct: 318 NRSKSEFLATMSHEIRTPMNAIIGMTGLLLDTDLT----TQQKYFAQTIRNSGETLLTLI 373 Query: 126 DDILIINRAEAGKLEFNPNWLDLKLLFQQFIEEIQLSVSDQYY--FDFICSAQDTKALVD 183 +DIL ++ EAGKL+ DL ++ ++ + S + + D Sbjct: 374 NDILDFSKIEAGKLDLEVYPFDLGQCLEEALDVVVPSARQKSLTLIRRFLTPIPPNLQGD 433 Query: 184 ERLVRSILSNLLSNAIKYSPGGGQIKIALSLDSE-------QIIFEVTDQGIGISPEDQK 236 +R IL NLLSNA+K++ G Q+K+ + + QI F V D GIGI+P Q+ Sbjct: 434 VTRLRQILVNLLSNAVKFTEAG-QVKVTVEVVDHDAAKGEYQICFAVQDTGIGIAPNQQQ 492 Query: 237 QIFEPFHRGKN--VRNITGTGLGLMVAKKCVDLHSGSILLKS 276 +F+ F +G + R GTGLGL + + L G+I +S Sbjct: 493 ALFQAFSQGNSSITRRFGGTGLGLAICVRLTALMGGTIWAES 534 >SYNE-PCC-01-001294 sll1888 Length = 432 Score = 81.3 bits (199), Expect = 4e-18 Identities = 66/240 (27%), Positives = 124/240 (51%), Gaps = 21/240 (8%) Query: 63 KELSRLKTRFFSMASHEFRTPLSTALAAAQLLENSEVAWLDPDKRSRNLHRIQNSVKNMV 122 +E SRLK+ F + +HE RTPL+ + +L+ + ++A + +K + S ++ Sbjct: 188 EEASRLKSEFLASTTHELRTPLNGIIGFLRLILD-DMADSEAEKH-EFVEEAYQSALLLL 245 Query: 123 QLLDDILIINRAEAGKLEFNPNWLDLKLLFQQFIEEIQLSVSDQYYFDFICSAQDTKALV 182 L++DIL + + EAG++ +D + Q E L + F +A + L+ Sbjct: 246 NLINDILDLAKIEAGRVGIELEVVDFSEVLQA-TENFALPQAQNKGLSFNLTAPNQGPLL 304 Query: 183 ---DERLVRSILSNLLSNAIKYSPGGGQIKIALSLDSEQIIFE-----------VTDQGI 228 ++R + ++ N++ NAIK++ GG I +A+ + +++E V D GI Sbjct: 305 VYGNQRWLLQVMLNIVGNAIKFTHEGG-ITVAVEVMPRTVLWEGVQKPGLLKVSVGDTGI 363 Query: 229 GISPEDQKQIFEPFHR--GKNVRNITGTGLGLMVAKKCVDLHSGSILLKSAVD-QGTTVT 285 G+S E Q ++F+ F + G + + GTGLGL++++K V+ G + S + G+TVT Sbjct: 364 GVSLEQQSKLFKKFVQIDGSHSKAYGGTGLGLVISQKLVETMGGKVAFFSMGEGLGSTVT 423 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 80.1 bits (196), Expect = 8e-18 Identities = 61/243 (25%), Positives = 114/243 (46%), Gaps = 24/243 (9%) Query: 66 SRLKTRFFSMASHEFRTPLSTALAAAQLLENSEVAWLDPDKRSRNLHRIQNSVKNMVQLL 125 +R K F +M SHE RTP++ + +LL +++ D + I+ S + ++ ++ Sbjct: 775 NRAKGEFLAMMSHEIRTPMNGVIGMTELLIMTDLNLQQLD----YVQTIRQSGETLLTII 830 Query: 126 DDILIINRAEAGKLEFNPNWLDLKLLFQQFIEEI-QLSVSDQYYFDFICSAQ-DTKALVD 183 +DIL ++ EA KL +L+ L + +E ++ + + Q + L D Sbjct: 831 NDILDFSKIEADKLVLETQAFELRPLIETVLEMFGPIARAKHLELTYGIDPQTPARILGD 890 Query: 184 ERLVRSILSNLLSNAIKYSPGGGQIK----------------IALSLDSEQIIFEVTDQG 227 + +R ILSNL+ NA+K++ G + + L S +I F + D G Sbjct: 891 QVRLRQILSNLIGNALKFTEKGEVVLTVKGEPFDPAESYHTILNLPHPSHRICFNLRDTG 950 Query: 228 IGISPEDQKQIFEPFHR--GKNVRNITGTGLGLMVAKKCVDLHSGSILLKSAVDQGTTVT 285 IGI + Q ++F+ F + R GTGLGL+++++ + G + + S G+ Sbjct: 951 IGIPLDRQDRLFKSFSQVDSSTTRKYGGTGLGLVISQRLTQMMGGVLTVTSEPGVGSNFR 1010 Query: 286 ICL 288 C+ Sbjct: 1011 FCI 1013 >SYNE-PCC-01-001690 slr0473 Length = 748 Score = 72.0 bits (175), Expect = 2e-15 Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 6/214 (2%) Query: 71 RFFSMASHEFRTPLSTALAAAQLLENSEVAWLDPDKRSRNLHRIQNSVKNMVQLLDDILI 130 +F +ASH+ + PL+ QLLE LD D + + V M L+DDIL Sbjct: 531 KFAYIASHDLQEPLNQVSNYVQLLEMRYSEALDEDAKDF-IDFAVTGVSLMQTLIDDILT 589 Query: 131 INRAEAGKLEFNPNWLDLKLLFQQFIEEIQLSVSDQYYFDFICSAQDTKALVDERLVRSI 190 + + + + D++ + + + ++ + + + S A D+ + + Sbjct: 590 YAKVDTQYAQLT--FTDVQEVVDKALANLKQRIEESGAEIEVGSMPAVMA--DQIQLMQV 645 Query: 191 LSNLLSNAIKYSPGGG-QIKIALSLDSEQIIFEVTDQGIGISPEDQKQIFEPFHRGKNVR 249 NL++N IK++ +IKI + +F V D GIGI P+ ++IF F R Sbjct: 646 FQNLIANGIKFAGDKSPKIKIWGDRQEDAWVFAVQDNGIGIDPQFFERIFVIFQRLHTRD 705 Query: 250 NITGTGLGLMVAKKCVDLHSGSILLKSAVDQGTT 283 GTG+GL + KK ++ H G I L+S +G+T Sbjct: 706 EYKGTGMGLAICKKIIEGHQGQIWLESNPGEGST 739 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.321 0.136 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,267 Number of Sequences: 78 Number of extensions: 1016 Number of successful extensions: 65 Number of sequences better than 1.0e-05: 15 Number of HSP's better than 0.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 14 Number of HSP's gapped (non-prelim): 18 length of query: 297 length of database: 48,235 effective HSP length: 62 effective length of query: 235 effective length of database: 43,399 effective search space: 10198765 effective search space used: 10198765 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 92 (40.0 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-001039 sll1544 (228 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-001039 sll1544 442 e-127 SYNE-PCC-01-000608 sll0921 82 1e-18 SYNE-PCC-01-001160 sll1708 77 5e-17 HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator pr... 70 6e-15 SYNE-PCC-01-001075 sll1592 68 3e-14 SYNE-PCC-01-001575 slr0312 67 6e-14 SYNE-PCC-01-000511 sll0782 49 1e-08 SYNE-PCC-01-002951 ssl0564 42 2e-06 SYNE-PCC-01-002731 slr1909 42 2e-06 SYNE-PCC-01-002635 slr1783 41 4e-06 >SYNE-PCC-01-001039 sll1544 Length = 228 Score = 442 bits (1136), Expect = e-127 Identities = 228/228 (100%), Positives = 228/228 (100%) Query: 1 MEFDPDSLVFNARYDLFQLLVNHFNVIACLYPRLFAVSVARISSQRPNKKKVKIFTLQSE 60 MEFDPDSLVFNARYDLFQLLVNHFNVIACLYPRLFAVSVARISSQRPNKKKVKIFTLQSE Sbjct: 1 MEFDPDSLVFNARYDLFQLLVNHFNVIACLYPRLFAVSVARISSQRPNKKKVKIFTLQSE 60 Query: 61 ALTYFEQQPEPLVVVICQRLEDGSGLDLLKQLKAHARSPQCLLLLLNDHAAIVEEAQQYG 120 ALTYFEQQPEPLVVVICQRLEDGSGLDLLKQLKAHARSPQCLLLLLNDHAAIVEEAQQYG Sbjct: 61 ALTYFEQQPEPLVVVICQRLEDGSGLDLLKQLKAHARSPQCLLLLLNDHAAIVEEAQQYG 120 Query: 121 ADAIFLESSLGNGEINLAVECLLQGRTYIDSRLEAIADYRKSQKDELTQREVAILRLVAE 180 ADAIFLESSLGNGEINLAVECLLQGRTYIDSRLEAIADYRKSQKDELTQREVAILRLVAE Sbjct: 121 ADAIFLESSLGNGEINLAVECLLQGRTYIDSRLEAIADYRKSQKDELTQREVAILRLVAE 180 Query: 181 GKTNSEIGQELHLASSTVREYVQTIMRKLNARDRTSAAIAGLREGYLT 228 GKTNSEIGQELHLASSTVREYVQTIMRKLNARDRTSAAIAGLREGYLT Sbjct: 181 GKTNSEIGQELHLASSTVREYVQTIMRKLNARDRTSAAIAGLREGYLT 228 >SYNE-PCC-01-000608 sll0921 Length = 222 Score = 82.0 bits (201), Expect = 1e-18 Identities = 58/175 (33%), Positives = 92/175 (52%), Gaps = 17/175 (9%) Query: 67 QQPEPLVVVICQRLEDGSGLDLLKQLKAHARSPQC--LLLLLNDHAAIVEEAQQYGADAI 124 QQ P VV+I L D +G+D+ +QLK + QC ++L LND V A GADA Sbjct: 46 QQTRPDVVIIDIGLPDMNGIDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAY 105 Query: 125 FLESSLGNGEINLAVECLLQGRTYIDSRLEAI--------------ADYRKSQKDELTQR 170 ++ S I A++ G +ID + I + R S LT+R Sbjct: 106 CMKDSRTELLIE-AIQATHGGFAWIDPAIARIVLAHAPGAEPSEPSSPSRTSLSYGLTER 164 Query: 171 EVAILRLVAEGKTNSEIGQELHLASSTVREYVQTIMRKLNARDRTSAAIAGLREG 225 E+ +L+L+ +G +N++I ++L++ TV+ +V+ I+ KL A DRT AA+ +R G Sbjct: 165 ELEVLQLIVDGCSNADIAEKLYITVGTVKTHVRNILNKLCANDRTQAAVRAIRSG 219 >SYNE-PCC-01-001160 sll1708 Length = 226 Score = 77.0 bits (188), Expect = 5e-17 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 13/165 (7%) Query: 71 PLVVVICQRLEDGSGLDLLKQLKAHARSPQCLLLLLNDHAAIVE--EAQQYGADAIFLES 128 P ++V+ L G++ KQ+K SPQ +++L H E A GADA ++ Sbjct: 63 PDLIVMDIGLPGLDGIEATKQIKQ--TSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKG 120 Query: 129 SLGNGEINLAVECLLQGRTYIDSRLEAIA------DYRKSQKD--ELTQREVAILRLVAE 180 + I LA+ G TY+D ++ + + Q D L++RE+ +L+L+ E Sbjct: 121 ATLERLI-LAIAAAQDGATYLDPQIARVVVENLKPPVPEGQADVSSLSEREIDVLKLIVE 179 Query: 181 GKTNSEIGQELHLASSTVREYVQTIMRKLNARDRTSAAIAGLREG 225 GK+N EI Q L+L+++T++ +V+ IM KL+ DR AA+ LR G Sbjct: 180 GKSNQEIAQTLYLSTNTIKTHVRGIMNKLSVDDRVQAAVIALRSG 224 >HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator protein (narP) Length = 208 Score = 70.1 bits (170), Expect = 6e-15 Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 24/165 (14%) Query: 68 QPEPLVVVICQRLEDGSGLDLLKQLKAHARSPQCLLLLLNDHAAIVEEAQQYGADAIFLE 127 Q P V+++ ++ SGLD LK L+A + L+L ++D + GAD L+ Sbjct: 48 QTSPDVIILDLNMKGLSGLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLK 107 Query: 128 SS-----------LGNGEINLA--VECLLQGRTYIDSRLEAIADYRKSQKDELTQREVAI 174 + + GE+ L+ ++ LL RT+ D+ L D LT RE+ + Sbjct: 108 DTEPDTLLEQIKRIAQGEVILSDSIKNLLLERTHEDNPL-----------DSLTDREMGV 156 Query: 175 LRLVAEGKTNSEIGQELHLASSTVREYVQTIMRKLNARDRTSAAI 219 LR +A G +N +I +L ++ TV+ +++ ++RKLN R +A + Sbjct: 157 LRQIATGLSNKQIAAQLFISEETVKVHIRNLLRKLNVHSRVAATV 201 >SYNE-PCC-01-001075 sll1592 Length = 226 Score = 67.8 bits (164), Expect = 3e-14 Identities = 62/211 (29%), Positives = 96/211 (45%), Gaps = 31/211 (14%) Query: 34 LFAVSVARISSQRPNKKKVKIFTLQSEALTYFEQQPEPLVVVICQRLEDGSGLDLLKQLK 93 LF + + SQ P A+ Y QQ VV++ L G++ Q+K Sbjct: 18 LFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFD-VVILDVGLPGIGGIEACHQIK 76 Query: 94 AHARSPQCLLLLLNDHAA-------IVEEAQQYGADAIFLESSLGNGEINLAVECLLQGR 146 PQ +L+L H+ I +AQ Y + E+ + LA+ + G Sbjct: 77 KI--HPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLV------LAIRSVAAGA 128 Query: 147 TYIDS----RLEAIADYRKSQ-----------KDELTQREVAILRLVAEGKTNSEIGQEL 191 + D+ ++ + S ++ LT+RE+ IL LVA+GK+N EI EL Sbjct: 129 FWWDAIASQEIQTAFQHSSSTGAVLPLADADGENPLTKRELEILSLVAKGKSNQEIADEL 188 Query: 192 HLASSTVREYVQTIMRKLNARDRTSAAIAGL 222 ++A TVR +V TI+RKL RDRT AA+ + Sbjct: 189 YIAPGTVRVHVHTILRKLEVRDRTQAALLAI 219 >SYNE-PCC-01-001575 slr0312 Length = 209 Score = 66.6 bits (161), Expect = 6e-14 Identities = 48/195 (24%), Positives = 98/195 (50%), Gaps = 3/195 (1%) Query: 34 LFAVSVARISSQRPNKKKVKIFTLQSEALTYFEQQPEPLVVVICQRLEDGSGLDLLKQLK 93 +F +A I ++ P+ + + +A+ FE+ +P V ++ R+ + G+ + + Sbjct: 17 IFRQGLATIINRDPDMQVIAQAENGEQAIALFEEH-QPDVTLMDLRMPEVEGVAAISAIC 75 Query: 94 AHARSPQCLLLLLNDHAAIVEEAQQYGADAIFLESSLGNGEINLAVECLLQGRTYIDSRL 153 A + + ++L D + Q GA L+ + + +N A+ + +G+ YI + Sbjct: 76 AIVKFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLN-AIRTVHRGQKYIPPDV 134 Query: 154 EAIADYRKSQKDELTQREVAILRLVAEGKTNSEIGQELHLASSTVREYVQTIMRKLNARD 213 A R S EL++RE+ +L +A+G +N++I L + TV+ +V I+ KL+ D Sbjct: 135 GAKLVQRLSNP-ELSERELEVLGSLAQGMSNADIATALSIGEGTVKSHVNRILNKLDVGD 193 Query: 214 RTSAAIAGLREGYLT 228 RT A I ++ G ++ Sbjct: 194 RTQAVIVAVKRGIVS 208 >SYNE-PCC-01-000511 sll0782 Length = 369 Score = 49.3 bits (116), Expect = 1e-08 Identities = 24/67 (35%), Positives = 42/67 (62%) Query: 161 KSQKDELTQREVAILRLVAEGKTNSEIGQELHLASSTVREYVQTIMRKLNARDRTSAAIA 220 K K L++RE I+ L+A+G + +I +ELH++ STV+ +V + KLNA++R A Sbjct: 303 KLNKHLLSEREKEIVSLLAQGLRDRDIAEELHISESTVKFHVNGTLHKLNAKNRYQAIYQ 362 Query: 221 GLREGYL 227 +G++ Sbjct: 363 ATVQGFI 369 >SYNE-PCC-01-002951 ssl0564 Length = 89 Score = 41.6 bits (96), Expect = 2e-06 Identities = 22/59 (37%), Positives = 32/59 (54%) Query: 167 LTQREVAILRLVAEGKTNSEIGQELHLASSTVREYVQTIMRKLNARDRTSAAIAGLREG 225 L+ RE+ IL LVA G TN E+ + L ++ TV +V I+ K N +R L+ G Sbjct: 12 LSDRELEILDLVAIGLTNQEVSERLEISKRTVDNHVSNILTKTNTENRVELVRWALQWG 70 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 41.6 bits (96), Expect = 2e-06 Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 5/103 (4%) Query: 120 GADAIFLESSLGNGEINLAVE-CLLQGRTYIDSRLEAIADYRKSQ--KD-ELTQREVAIL 175 GAD I++ E+ V+ CL Q + + D + Q +D ELT E ++ Sbjct: 103 GAD-IYMAKPFEPEELAAQVQSCLRQADRLLQHNNHPLEDNARVQVARDVELTPTETKVI 161 Query: 176 RLVAEGKTNSEIGQELHLASSTVREYVQTIMRKLNARDRTSAA 218 +LVA+G N EI L ++ TV +V ++ K +RT A Sbjct: 162 QLVAQGLANREIADHLKVSQRTVESHVSNMLNKTGLHNRTELA 204 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 40.8 bits (94), Expect = 4e-06 Identities = 47/200 (23%), Positives = 77/200 (38%), Gaps = 27/200 (13%) Query: 51 KVKIFTLQSEALTYFEQQPEPLVVVICQRLEDGSGLDLLKQLKAHARSPQCLLLLLNDHA 110 KV + +EA Y Q P +V+ + G L++L+ AR ++ L Sbjct: 82 KVDLAANATEAWDYL-QHHLPALVISDIMMPQVDGYQFLQKLREDARFQSLPVVFLTARG 140 Query: 111 AIVEEAQQY--GADAIFLESSLGNGEINLAVECLLQGRTYID------SRLEAIADYRKS 162 + Q Y G DA FL E+ V LL + ++L+ I ++ Sbjct: 141 MTGDRIQGYQTGCDA-FLSKPFDPDELEAIVRNLLARQQASSDAGSESAKLQEIYQEIRA 199 Query: 163 QKDEL-----------------TQREVAILRLVAEGKTNSEIGQELHLASSTVREYVQTI 205 K+++ T RE ++L LV++G N EI +L + V +YV + Sbjct: 200 LKEQIGQPSGIHTTPSPIKLDFTPREQSVLDLVSQGLMNKEIAAQLKTSVRNVEKYVSRL 259 Query: 206 MRKLNARDRTSAAIAGLREG 225 K RT L+ G Sbjct: 260 FTKTGTNSRTELVRFALQHG 279 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.320 0.136 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,618 Number of Sequences: 78 Number of extensions: 775 Number of successful extensions: 20 Number of sequences better than 1.0e-05: 10 Number of HSP's better than 0.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 8 Number of HSP's gapped (non-prelim): 10 length of query: 228 length of database: 48,235 effective HSP length: 60 effective length of query: 168 effective length of database: 43,555 effective search space: 7317240 effective search space used: 7317240 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 91 (39.7 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-001071 sll1583 (562 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-001071 sll1583 859 0.0 SYNE-PCC-01-000727 sll1120 46 3e-07 MPNE-M12-01-000474 gi|13508213|ref|NP_110162.1| coiled coil pro... 45 8e-07 SYNE-PCC-01-000943 sll1424 43 3e-06 SCER-S28-01-000806 ORFP:YDL058W USO1, Chr IV from 345664-351036 42 4e-06 >SYNE-PCC-01-001071 sll1583 Length = 562 Score = 859 bits (2220), Expect = 0.0 Identities = 462/562 (82%), Positives = 462/562 (82%) Query: 1 MTPLELSYPLSGLVLALGSGIYVWNSRRALEKKLAQSQPSDQPPTLIAGSGTPAVKEVAP 60 MTPLELSYPLSGLVLALGSGIYVWNSRRALEKKLAQSQPSDQPPTLIAGSGTPAVKEVAP Sbjct: 1 MTPLELSYPLSGLVLALGSGIYVWNSRRALEKKLAQSQPSDQPPTLIAGSGTPAVKEVAP 60 Query: 61 ENDGESPEAVIHAKGKLRRLEKDLQSVQASLENALAERNQLTENYQAQEKMVAALQHQLA 120 ENDGESPEAVIHAKGKLRRLEKDLQSVQASLENALAERNQLTENYQAQEKMVAALQHQLA Sbjct: 61 ENDGESPEAVIHAKGKLRRLEKDLQSVQASLENALAERNQLTENYQAQEKMVAALQHQLA 120 Query: 121 HYDDIQSEKFVGXXXXXXXXXXXXXXXSDRLKQAVNEVAETRPKLVQLNSLVTRNQQLSD 180 HYDDIQSEKFVG SDRLKQAVNEVAETRPKLVQLNSLVTRNQQLSD Sbjct: 121 HYDDIQSEKFVGLQKLNQELLQENTNLSDRLKQAVNEVAETRPKLVQLNSLVTRNQQLSD 180 Query: 181 QLSYVEQNQAKAIEQRLASQEKLWQQRHEQEQAQWNSQASQWEEQVRQLTAERDQVQQEL 240 QLSYVEQNQAKAIEQRLASQEKLWQQRHEQEQAQWNSQASQWEEQVRQLTAERDQVQQEL Sbjct: 181 QLSYVEQNQAKAIEQRLASQEKLWQQRHEQEQAQWNSQASQWEEQVRQLTAERDQVQQEL 240 Query: 241 XXXXXXXXXXXXXXENLQAALDRLGQQEEQWQGERSQLTAKLNQLEEAQKELALANAELK 300 ENLQAALDRLGQQEEQWQGERSQLTAKLNQLEEAQKELALANAELK Sbjct: 241 QTARQQSQSAQTQAENLQAALDRLGQQEEQWQGERSQLTAKLNQLEEAQKELALANAELK 300 Query: 301 VKLETTQAEGDRLKTEKKEQAAALQSAQGQVTXXXXXXXXXXXXXXXXXGEPPSEVPEKT 360 VKLETTQAEGDRLKTEKKEQAAALQSAQGQVT GEPPSEVPEKT Sbjct: 301 VKLETTQAEGDRLKTEKKEQAAALQSAQGQVTQLQQELAALQENLAKAKGEPPSEVPEKT 360 Query: 361 KAVATXXXXXXXXXXXXXXXXXXXKQESPKSVQXXXXXXXXXXXXXXXXXXXXXXXXXXX 420 KAVAT KQESPKSVQ Sbjct: 361 KAVATAPAQEAPVVSPSPPVTVEVKQESPKSVQAEKVEPEPEPTPVPPAAQATKAPASPA 420 Query: 421 XXXXXXXXDEVLDQEEKQVKAVEKTEPPRENKTVAPVATSEDVAPTVETETITDPVATVP 480 DEVLDQEEKQVKAVEKTEPPRENKTVAPVATSEDVAPTVETETITDPVATVP Sbjct: 421 KKSTAKAVDEVLDQEEKQVKAVEKTEPPRENKTVAPVATSEDVAPTVETETITDPVATVP 480 Query: 481 SNEEGAHPLAEKKVVILGTLNAMNREEAKTRLQNVGAECTGTPSGKTDYIVVGKAPGAKL 540 SNEEGAHPLAEKKVVILGTLNAMNREEAKTRLQNVGAECTGTPSGKTDYIVVGKAPGAKL Sbjct: 481 SNEEGAHPLAEKKVVILGTLNAMNREEAKTRLQNVGAECTGTPSGKTDYIVVGKAPGAKL 540 Query: 541 KKAQKLGIAQLSEAQFLELLGD 562 KKAQKLGIAQLSEAQFLELLGD Sbjct: 541 KKAQKLGIAQLSEAQFLELLGD 562 >SYNE-PCC-01-000727 sll1120 Length = 1200 Score = 45.8 bits (107), Expect = 3e-07 Identities = 61/269 (22%), Positives = 109/269 (40%), Gaps = 49/269 (18%) Query: 76 KLRRLEKDLQSVQASLENALAERNQLTENYQAQEKMVAALQHQLAHYDDIQSEKFVGXXX 135 +LR+ +D+Q VQ E L ER + Q+ M Q + A Q+E+ + Sbjct: 703 QLRQRLQDIQQVQGRNEELLLERT-VRSRQLTQQLMEMRQQQREAQLHGEQTERDIARL- 760 Query: 136 XXXXXXXXXXXXSDRLKQAVNEVAETRPKLVQLNSLVTRNQQLSDQLSYVEQNQAKAIEQ 195 S + Q + + KL +L + QQ L +EQ A A +Q Sbjct: 761 ------------SQQQTQINQQQINQQQKLAELQQNLALLQQ---SLPPLEQQLASAQQQ 805 Query: 196 RLASQEKLWQQRHEQEQAQWNSQASQWEEQVRQLTAERDQVQQELXXXXXXXXXXXXXXE 255 A + Q+ + Q Q + ++++ Q++ L D ++ Sbjct: 806 LTALETSQTHQQWQTIQIQIRTVEAEYQRQLQALRQGEDHLK------------------ 847 Query: 256 NLQAALDRLGQQEEQWQGERSQLTAKLNQLEEAQKELALANAELKVKLETTQA------- 308 +LQ + RL ++ Q Q + +Q A+ L + Q++L +A AE+ ++TT+A Sbjct: 848 DLQNSSQRLEEKIAQAQEKIAQHQAQDLTLAQEQEQLKIALAEMNGAIQTTEAQLAKLSE 907 Query: 309 -------EGDRLKTEKKEQAAALQSAQGQ 330 E DRL+T+ + + Q Q Q Sbjct: 908 KLGSTKQERDRLETQLNQLRSQQQEQQWQ 936 Score = 44.7 bits (104), Expect = 8e-07 Identities = 66/297 (22%), Positives = 122/297 (41%), Gaps = 49/297 (16%) Query: 65 ESPEAVIHAKGKLRRLEKDLQSVQASLENALAERNQLTENYQAQEKMVAALQH--QLAHY 122 ++ E + + + R + ++ +LE A+R Q E YQA + V Q ++ Y Sbjct: 195 KTKETLTEVQDREERCQIIATELERTLERLAADR-QKAEKYQALRQQVQEKQGWAKVIQY 253 Query: 123 DDIQSEKFVGXXXXXXXXXXXXXXXSDRLKQAVNEVAETRPKLVQLNSLVTRNQQLSDQL 182 ++ ++ S +++QA+++ R + +Q T ++L+ Q+ Sbjct: 254 KAVEQQR-----QKLWGQLERDREQSQQIQQALDQ----RSQAIQTQQ--TELEKLNAQV 302 Query: 183 SYVEQNQAKAIEQRLASQEKLWQQRHEQEQAQWNSQASQWEEQVRQLTAERDQVQQE-LX 241 + + + A+ +LA+Q K + + +Q + Q + ++QV Q+ AE Q QQ+ L Sbjct: 303 KALGEEEQLAVAAQLATQ-KAQRDQLQQRYNDGDRQITNHQQQVGQIQAEISQSQQQFLH 361 Query: 242 XXXXXXXXXXXXXENLQAALDRLGQQEEQ--------------WQGERSQLTAKLNQL-- 285 L+AA+ QQ EQ W E++QL+ +NQL Sbjct: 362 IQQEKSFHNTQTLPQLEAAVQTSQQQLEQLRHQAQAIASASEAWVQEQTQLSRTVNQLQD 421 Query: 286 ------------EEAQKELALANAELKVKLETTQAEGDRLKTEKKEQAAALQSAQGQ 330 EE Q++L AEL L E E+K+ A + QG+ Sbjct: 422 ELIPQRSQLAQLEERQQQLLTNLAELTPLLTKVSVE-----LEEKQFAQGQFNFQGE 473 >MPNE-M12-01-000474 gi|13508213|ref|NP_110162.1| coiled coil protein, putative structural protein involved in cytosceleton [Mycoplasma pneumoniae] Length = 1033 Score = 44.7 bits (104), Expect = 8e-07 Identities = 65/299 (21%), Positives = 113/299 (37%), Gaps = 42/299 (14%) Query: 30 LEKKLAQSQPSDQPPTL------IAGSGTPAVKEVAPENDGESPEAVIHAKGK---LRRL 80 LE++LA+ DQ P L + T +E+ E + + ++ L RL Sbjct: 377 LEEQLAKPLQYDQSPVLQERIELLQNQNTNLTQEL-----NELQQKLFKSQNNSLLLARL 431 Query: 81 EKDLQSVQASLENALAERNQLTENYQAQEKMVAALQHQLAHYDDIQSEKFVGXXXXXXXX 140 E++ ++++ L+N L E NQL + Q + + +H L +Q E++ Sbjct: 432 EEENRTLKQHLQNNLPEANQLNFVLEKQLEQLQQDKHSLT----LQIEQYKFDSKKHQEQ 487 Query: 141 XXXXXXXSDRLKQAVNEVAETRPKLVQLNSLVTRNQQLSDQLSYVEQ-----------NQ 189 + EV + +L+ + N L ++ + + N Sbjct: 488 LALIPSLRSEINSLETEVISLKQTNQRLSLIERENNFLKTEIKQLRETKLNDENTKYRNL 547 Query: 190 AKAIE-QRLASQEKLWQQRHEQEQAQWNSQASQWEEQVRQLTAERDQVQQELXXXXXXXX 248 K E R S KL + HEQ A + Q EQ+ QL + + +EL Sbjct: 548 LKQYELMRADSDAKLKELEHEQHLAHQHHQ-----EQLAQLQRHNEALVKELDQVKATNF 602 Query: 249 XXXXXXENLQAALDRLGQQEEQWQGERSQLTAKLNQLEEAQKELALANAELKVKLETTQ 307 L A QQ+ + + S L A L EE + L + N+EL+ +L + Sbjct: 603 -------ELGLAAQGFEQQKVVLEQKNSSLLASLQAAEENVQALGITNSELQNQLNVLE 654 >SYNE-PCC-01-000943 sll1424 Length = 491 Score = 42.7 bits (99), Expect = 3e-06 Identities = 50/223 (22%), Positives = 99/223 (44%), Gaps = 19/223 (8%) Query: 75 GKLRRLEKDLQSVQASLENALAE----RNQLTENYQAQEKMVAALQHQLAHYDDIQ--SE 128 G L K L+ L++ LA+ + +L + QA+E++ + L +Q S Sbjct: 62 GILFTFSKSLREGVFQLDDILAQLRVAKTELEQASQAKEEIESELTAVREEQQLVQERSR 121 Query: 129 KFVGXXXXXXXXXXXXXXXSDRLKQAVNEVAETRPKL-VQLNSLVTRNQQLSDQLSYVEQ 187 + S L+Q V ++ R +L Q +SL+ + +L Q+ +Q Sbjct: 122 ELNRNYTKALQLLRRVSEQSRNLRQEVANLSAERAQLNEQKDSLLAESSELQSQVKLRDQ 181 Query: 188 NQAKAIEQRLASQEKLWQQRHEQEQAQWNSQASQWEEQVRQLTAERDQVQQELXXXXXXX 247 +K ++R+A QEK+ ++ EQ Q+ E++ L A+R Q+Q E+ Sbjct: 182 ELSKR-QERIAQQEKVLARQREQVQSL--------EKRFASLEAQRQQLQAEI---NQRD 229 Query: 248 XXXXXXXENLQAALDRLGQQEEQWQGERSQLTAKLNQLEEAQK 290 + + A + + +EE+ QG ++L+ ++EE ++ Sbjct: 230 TKIDQLDQAIAAKDNDIQAREEKLQGLETELSFLQREVEELER 272 >SCER-S28-01-000806 ORFP:YDL058W USO1, Chr IV from 345664-351036 Length = 1790 Score = 42.4 bits (98), Expect = 4e-06 Identities = 59/318 (18%), Positives = 121/318 (38%), Gaps = 22/318 (6%) Query: 25 NSRRALEKKLAQSQPSDQP---PTLIAGSGTPAVKEVAPENDGESPEAVIHAKGKLRRLE 81 N+ LEK + Q +Q + G+ + + E + +I + + Sbjct: 1346 NAEEQLEKLKNEIQIKNQAFEKERKLLNEGSSTITQEYSEKINTLEDELIRLQNENELKA 1405 Query: 82 KDLQSVQASLENALAERNQLTENYQAQEKMVAALQHQLAHYDDI---QSEKFVGXXXXXX 138 K++ + ++ LE ++L E Q + +LQ ++ Y D EK + Sbjct: 1406 KEIDNTRSELEKVSLSNDELLEEKQ---NTIKSLQDEILSYKDKITRNDEKLLSIERDNK 1462 Query: 139 XXXXXXXXXSDRLKQAVNEVAETRPKLVQLNSLVTRNQQLSDQL-----SYVEQNQAK-- 191 +++ +V E KL + +S + S ++ S +E N+ + Sbjct: 1463 RDLESLKEQLRAAQESKAKVEEGLKKLEEESSKEKAELEKSKEMMKKLESTIESNETELK 1522 Query: 192 -AIEQRLASQEKLWQQRHEQEQAQWNSQASQWEEQVRQLTAERDQVQQELXXXXXXXXXX 250 ++E S EKL Q + E+ N Q + L + ++ ++++ Sbjct: 1523 SSMETIRKSDEKLEQSKKSAEEDIKNLQ-----HEKSDLISRINESEKDIEELKSKLRIE 1577 Query: 251 XXXXENLQAALDRLGQQEEQWQGERSQLTAKLNQLEEAQKELALANAELKVKLETTQAEG 310 L+ L +E+ + + T ++LE+ ++EL AE+K E + Sbjct: 1578 AKSGSELETVKQELNNAQEKIRINAEENTVLKSKLEDIERELKDKQAEIKSNQEEKELLT 1637 Query: 311 DRLKTEKKEQAAALQSAQ 328 RLK ++E + Q AQ Sbjct: 1638 SRLKELEQELDSTQQKAQ 1655 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.305 0.122 0.321 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,265 Number of Sequences: 78 Number of extensions: 1935 Number of successful extensions: 75 Number of sequences better than 1.0e-05: 5 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 36 Number of HSP's gapped (non-prelim): 18 length of query: 562 length of database: 48,235 effective HSP length: 67 effective length of query: 495 effective length of database: 43,009 effective search space: 21289455 effective search space used: 21289455 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (21.9 bits) S2: 95 (41.2 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-001075 sll1592 (226 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-001075 sll1592 434 e-125 SYNE-PCC-01-001160 sll1708 150 3e-39 SYNE-PCC-01-000608 sll0921 140 3e-36 SYNE-PCC-01-001575 slr0312 128 2e-32 HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator pr... 102 1e-24 SYNE-PCC-01-001039 sll1544 68 3e-14 SYNE-PCC-01-002731 slr1909 65 2e-13 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 59 1e-11 SYNE-PCC-01-000518 sll0789 57 4e-11 SYNE-PCC-01-002221 slr1213 57 5e-11 SYNE-PCC-01-002033 slr0947 53 7e-10 SYNE-PCC-01-001437 slr0081 52 2e-09 SYNE-PCC-01-002486 slr1584 52 2e-09 SYNE-PCC-01-000511 sll0782 51 4e-09 SYNE-PCC-01-002788 slr1982 50 6e-09 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 49 1e-08 SYNE-PCC-01-000523 sll0797 49 1e-08 SYNE-PCC-01-000242 sll0396 49 2e-08 SYNE-PCC-01-002672 slr1837 48 2e-08 SYNE-PCC-01-000414 sll0649 48 2e-08 SYNE-PCC-01-002618 slr1760 47 4e-08 SYNE-PCC-01-002617 slr1759 47 5e-08 SYNE-PCC-01-002951 ssl0564 46 9e-08 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 45 3e-07 SYNE-PCC-01-001306 sll1905 43 8e-07 SYNE-PCC-01-002635 slr1783 42 2e-06 >SYNE-PCC-01-001075 sll1592 Length = 226 Score = 434 bits (1117), Expect = e-125 Identities = 226/226 (100%), Positives = 226/226 (100%) Query: 1 MAISPTSIRILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILD 60 MAISPTSIRILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILD Sbjct: 1 MAISPTSIRILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILD 60 Query: 61 VGLPGIGGIEACHQIKKIHPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLA 120 VGLPGIGGIEACHQIKKIHPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLA Sbjct: 61 VGLPGIGGIEACHQIKKIHPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLA 120 Query: 121 IRSVAAGAFWWDAIASQEIQTAFQHSSSTGAVLPLADADGENPLTKRELEILSLVAKGKS 180 IRSVAAGAFWWDAIASQEIQTAFQHSSSTGAVLPLADADGENPLTKRELEILSLVAKGKS Sbjct: 121 IRSVAAGAFWWDAIASQEIQTAFQHSSSTGAVLPLADADGENPLTKRELEILSLVAKGKS 180 Query: 181 NQEIADELYIAPGTVRVHVHTILRKLEVRDRTQAALLAIERRLVSL 226 NQEIADELYIAPGTVRVHVHTILRKLEVRDRTQAALLAIERRLVSL Sbjct: 181 NQEIADELYIAPGTVRVHVHTILRKLEVRDRTQAALLAIERRLVSL 226 >SYNE-PCC-01-001160 sll1708 Length = 226 Score = 150 bits (379), Expect = 3e-39 Identities = 84/217 (38%), Positives = 128/217 (58%), Gaps = 7/217 (3%) Query: 8 IRILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPGIG 67 ++IL+VEDD L +LGL L ++ G ++G A+ D++++D+GLPG+ Sbjct: 17 MKILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPGLD 76 Query: 68 GIEACHQIKKIHPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLAIRSVAAG 127 GIEA QIK+ PQ+ +++LTSH+ P I + + A YCVKG E L+LAI + G Sbjct: 77 GIEATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIAAAQDG 136 Query: 128 AFWWDAIASQEIQTAFQHSSSTGAVLPLADADGENPLTKRELEILSLVAKGKSNQEIADE 187 A + D Q A + +P AD + L++RE+++L L+ +GKSNQEIA Sbjct: 137 ATYLDP------QIARVVVENLKPPVPEGQAD-VSSLSEREIDVLKLIVEGKSNQEIAQT 189 Query: 188 LYIAPGTVRVHVHTILRKLEVRDRTQAALLAIERRLV 224 LY++ T++ HV I+ KL V DR QAA++A+ LV Sbjct: 190 LYLSTNTIKTHVRGIMNKLSVDDRVQAAVIALRSGLV 226 >SYNE-PCC-01-000608 sll0921 Length = 222 Score = 140 bits (354), Expect = 3e-36 Identities = 87/220 (39%), Positives = 120/220 (54%), Gaps = 3/220 (1%) Query: 8 IRILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPGIG 67 IRI L+ED++L R GL L+ EP + GEA +G + + Q DVVI+D+GLP + Sbjct: 4 IRIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMN 63 Query: 68 GIEACHQIKK--IHPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLAIRSVA 125 GI+ Q+KK ++ Q V+ILT + Q + A A YC+K E L+ AI++ Sbjct: 64 GIDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQATH 123 Query: 126 AGAFWWDAIASQEIQTAFQHSSSTGAVLPLADADGENPLTKRELEILSLVAKGKSNQEIA 185 G W D A I A + + LT+RELE+L L+ G SN +IA Sbjct: 124 GGFAWIDP-AIARIVLAHAPGAEPSEPSSPSRTSLSYGLTERELEVLQLIVDGCSNADIA 182 Query: 186 DELYIAPGTVRVHVHTILRKLEVRDRTQAALLAIERRLVS 225 ++LYI GTV+ HV IL KL DRTQAA+ AI LV+ Sbjct: 183 EKLYITVGTVKTHVRNILNKLCANDRTQAAVRAIRSGLVN 222 >SYNE-PCC-01-001575 slr0312 Length = 209 Score = 128 bits (321), Expect = 2e-32 Identities = 79/221 (35%), Positives = 127/221 (57%), Gaps = 16/221 (7%) Query: 6 TSIRILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPG 65 T+IR+L+ +D +FR GL T ++++P + V +AE+GE AIA + DV ++D+ +P Sbjct: 5 TTIRVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPE 64 Query: 66 IGGIEACHQIKKIHPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLAIRSVA 125 + G+ A I I +++LT++ I R ++A A+GY +K + L+ AIR+V Sbjct: 65 VEGVAAISAICAIVKFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVH 124 Query: 126 AGAFWWDAIASQEIQTAFQHSSSTGAVLPLADADGENPLTKRELEILSLVAKGKSNQEIA 185 G Q V L++ + L++RELE+L +A+G SN +IA Sbjct: 125 RG------------QKYIPPDVGAKLVQRLSNPE----LSERELEVLGSLAQGMSNADIA 168 Query: 186 DELYIAPGTVRVHVHTILRKLEVRDRTQAALLAIERRLVSL 226 L I GTV+ HV+ IL KL+V DRTQA ++A++R +VSL Sbjct: 169 TALSIGEGTVKSHVNRILNKLDVGDRTQAVIVAVKRGIVSL 209 >HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator protein (narP) Length = 208 Score = 102 bits (253), Expect = 1e-24 Identities = 67/217 (30%), Positives = 109/217 (50%), Gaps = 18/217 (8%) Query: 8 IRILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPGIG 67 +++LL++D L R G+ + + +V + G I+ Q DV+ILD+ + G+ Sbjct: 5 LKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLS 64 Query: 68 GIEACHQIKKIHPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLAIRSVAAG 127 G++ ++ +LILT I LI+A A GY +K +TL+ I+ +A G Sbjct: 65 GLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRIAQG 124 Query: 128 AFWWDAIASQEIQTAFQHSSSTGAVLPLADADGENP---LTKRELEILSLVAKGKSNQEI 184 + I S I+ L L +NP LT RE+ +L +A G SN++I Sbjct: 125 ----EVILSDSIKN-----------LLLERTHEDNPLDSLTDREMGVLRQIATGLSNKQI 169 Query: 185 ADELYIAPGTVRVHVHTILRKLEVRDRTQAALLAIER 221 A +L+I+ TV+VH+ +LRKL V R A +L E+ Sbjct: 170 AAQLFISEETVKVHIRNLLRKLNVHSRVAATVLFFEQ 206 >SYNE-PCC-01-001039 sll1544 Length = 228 Score = 67.8 bits (164), Expect = 3e-14 Identities = 62/211 (29%), Positives = 96/211 (45%), Gaps = 31/211 (14%) Query: 18 LFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFD-VVILDVGLPGIGGIEACHQIK 76 LF + + SQ P A+ Y QQ VV++ L G++ Q+K Sbjct: 34 LFAVSVARISSQRPNKKKVKIFTLQSEALTYFEQQPEPLVVVICQRLEDGSGLDLLKQLK 93 Query: 77 KI--HPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLV------LAIRSVAAGA 128 PQ +L+L H+ I +AQ Y + E+ + LA+ + G Sbjct: 94 AHARSPQCLLLLLNDHAA-------IVEEAQQYGADAIFLESSLGNGEINLAVECLLQGR 146 Query: 129 FWWDAIASQEIQTAFQHSSSTGAVLPLADADGENPLTKRELEILSLVAKGKSNQEIADEL 188 + D+ ++ + S ++ LT+RE+ IL LVA+GK+N EI EL Sbjct: 147 TYIDS----RLEAIADYRKSQ-----------KDELTQREVAILRLVAEGKTNSEIGQEL 191 Query: 189 YIAPGTVRVHVHTILRKLEVRDRTQAALLAI 219 ++A TVR +V TI+RKL RDRT AA+ + Sbjct: 192 HLASSTVREYVQTIMRKLNARDRTSAAIAGL 222 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 65.1 bits (157), Expect = 2e-13 Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 17/226 (7%) Query: 1 MAISPTSIRILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILD 60 M+ S + +LLV+DD L LV + G V A +G A+ + + D+++ D Sbjct: 1 MSQSKENYHLLLVDDDPNLLL-LVKDYLEYQGYQVT-TAGNGREALDLLTTTVPDMIVCD 58 Query: 61 VGLPGIGGIEACHQIKKIHPQL---PVLILTSHSQPALINRLIEAQAQGYCVKGVAAETL 117 + +P + G Q+++ +P + PV+ L++ Q + + A Y K E L Sbjct: 59 IMMPEMDGYAFIEQVRQ-NPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEEL 117 Query: 118 VLAIRSVAAGAFWWDAIASQEIQTAFQHSSSTGAVLPLADADGENPLTKRELEILSLVAK 177 ++S ++ QH++ + LT E +++ LVA+ Sbjct: 118 AAQVQSCL-----------RQADRLLQHNNHPLEDNARVQVARDVELTPTETKVIQLVAQ 166 Query: 178 GKSNQEIADELYIAPGTVRVHVHTILRKLEVRDRTQAALLAIERRL 223 G +N+EIAD L ++ TV HV +L K + +RT+ A AI++ + Sbjct: 167 GLANREIADHLKVSQRTVESHVSNMLNKTGLHNRTELARWAIQKSI 212 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 58.9 bits (141), Expect = 1e-11 Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 28/214 (13%) Query: 8 IRILLVEDDELFRLGLVTRLSQEPGLDVAGEA----EDGETAIAYVNQQLFDVVILDVGL 63 +RILL+EDD L GL + GL G A DG+T +A + +D V+LD+ L Sbjct: 1 MRILLIEDDNLIGNGL------QIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTL 54 Query: 64 PGIGGIEACHQIKKIHPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLAIRS 123 P + G+E Q + H +PVLILT+ + +++ A Y K A + +++ Sbjct: 55 PKLDGLEVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQA 114 Query: 124 VAAGAFWWDAIASQEIQTAFQHSSSTGAV--LPLADADGENPLTKRELEILSLVAKGK-- 179 + + + ++ + + + P++ LT RE ++L L K Sbjct: 115 LIRRRYGYHHSVIEQAGVKLDQNQRSVWLNNQPIS-------LTSREYKLLELFMLNKDR 167 Query: 180 --SNQEIADEL-----YIAPGTVRVHVHTILRKL 206 S I ++L I+ G + VH++ + +KL Sbjct: 168 VLSRSSIEEKLSSWDEEISSGALDVHIYNLRQKL 201 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 57.4 bits (137), Expect = 4e-11 Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 17/211 (8%) Query: 8 IRILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQL--FDVVILDVGLPG 65 +R+LLVED+ + L L +E V +DG A +Y++Q + + I D +PG Sbjct: 1 MRLLLVEDEPDLGMALEKALRRENY--VVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPG 58 Query: 66 IGGIEACHQIKKIHPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLAIRSVA 125 + G+E C +++ LP+L+LT+ Q A ++A A Y +K L+ +RS+ Sbjct: 59 LSGLELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAELLARLRSLQ 118 Query: 126 AGAFWWDAIASQEIQTAFQHSSSTGAVLPLADADGENPLTKRELEILSLVAKGK----SN 181 + + Q++Q Q G + LT +E ++L K S+ Sbjct: 119 RRS---PELQPQQLQVG-QWWLDYGTFAVVTPEQARITLTAKEFQLLEYFMKHPQQILSS 174 Query: 182 QEIADELYI-----APGTVRVHVHTILRKLE 207 ++I ++L+ V V + RKLE Sbjct: 175 EQIKNQLWALSAESTSNVVAAQVRLLRRKLE 205 >SYNE-PCC-01-002221 slr1213 Length = 241 Score = 57.0 bits (136), Expect = 5e-11 Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 3/114 (2%) Query: 9 RILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPG-IG 67 +IL+VED+ L + +L + G ++ A DG TA+ + + D+V+LD+ + G I Sbjct: 4 KILIVEDERLVAQH-IAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEID 62 Query: 68 GIEACHQIKKIHPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLAI 121 GIE +IK ++ +P++ LT+ S + R + QGY +K E L+ + Sbjct: 63 GIEVAERIKSLY-SIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTV 115 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 53.1 bits (126), Expect = 7e-10 Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 3/113 (2%) Query: 12 LVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPGIGGIEA 71 +V+D+ R L TRLS G +V A DGE AIA ++ D+V+LDV +P + G Sbjct: 1 MVDDEASIRRILETRLSMI-GYEVV-TAADGEEAIATFHESDPDLVVLDVMMPKLDGYGV 58 Query: 72 CHQIKKIHPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLAIRSV 124 C +++K +P+++LT+ A +E A Y VK + + L IRSV Sbjct: 59 CQELRK-ESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSV 110 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 52.0 bits (123), Expect = 2e-09 Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 9/127 (7%) Query: 5 PTSIRILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVN-------QQLFDVV 57 P S RIL+VED+ R +V L QE G +V +DG A+A + Q D++ Sbjct: 28 PPSHRILVVEDEVSIRETIVLSL-QEEGYEVYA-VDDGRDALALLQEFSEDPGQAAVDLI 85 Query: 58 ILDVGLPGIGGIEACHQIKKIHPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETL 117 ILD+ LP + G++ C ++ P+LI+++ +E A Y K + + L Sbjct: 86 ILDIMLPQVNGLDVCRSLRFGGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKEL 145 Query: 118 VLAIRSV 124 V R++ Sbjct: 146 VARCRAM 152 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 51.6 bits (122), Expect = 2e-09 Identities = 59/216 (27%), Positives = 91/216 (42%), Gaps = 30/216 (13%) Query: 8 IRILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPGIG 67 +RILLVEDD L LS + L A D A Y ++ +D+VILDV LP + Sbjct: 1 MRILLVEDDLPLAETLAEALSDQ--LYTVDIATDASLAWDYASRLEYDLVILDVMLPELD 58 Query: 68 GIEACHQIKKIHPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLAIRSV--- 124 GI C + + +P+L++T+ ++A A Y VK V L +R++ Sbjct: 59 GITLCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRR 118 Query: 125 ----AAGAFWWDAIASQEIQTAFQHSSSTGAVLPLADADGENPLTKRELEILSLVAKG-- 178 W I + + S VL LT++E IL L+ + Sbjct: 119 GCATCQPVLEWGPI---RLDPSTYEVSYDNEVL---------SLTRKEYSILELLLRNGR 166 Query: 179 --KSNQEIADELYIAPG-----TVRVHVHTILRKLE 207 S I D ++ TV+VHV ++ +KL+ Sbjct: 167 RVLSRSMIIDSIWKLESPPEEDTVKVHVRSLRQKLK 202 >SYNE-PCC-01-000511 sll0782 Length = 369 Score = 50.8 bits (120), Expect = 4e-09 Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 28/160 (17%) Query: 76 KKIHPQLPVLILTSHSQPALINRLIEAQAQGYC--VKGVAAETLVLAIRSVAAGAFWWDA 133 KK+ P L L++ + + NRL + YC + G + T+ + + + AF D Sbjct: 207 KKLSPTLAYLLIRTTE---IFNRL----SCNYCRLIYGEISVTIEAIVEASVSEAFNTDG 259 Query: 134 IAS-QEIQTAFQH--------SSSTGAVLPLA---DADG-------ENPLTKRELEILSL 174 + +EI+ H SS ++L ++ DG ++ L++RE EI+SL Sbjct: 260 RSPFKEIEFLAHHVGGEFRSQSSVNQSILQISLQLPYDGFQNIKLNKHLLSEREKEIVSL 319 Query: 175 VAKGKSNQEIADELYIAPGTVRVHVHTILRKLEVRDRTQA 214 +A+G +++IA+EL+I+ TV+ HV+ L KL ++R QA Sbjct: 320 LAQGLRDRDIAEELHISESTVKFHVNGTLHKLNAKNRYQA 359 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 50.1 bits (118), Expect = 6e-09 Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 6/113 (5%) Query: 9 RILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPGIGG 68 ++LLVED+E+ R L RL ++ G +V A DGE A+ + ++++D+ LP I G Sbjct: 6 KVLLVEDNEMNRDMLSRRLIRK-GYEVV-IAVDGEQAVTMAISESPQLILMDMSLPIIDG 63 Query: 69 IEACHQIKKIHP---QLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLV 118 A QIK HP +P++ LT+H+ + R I A Y K + + L+ Sbjct: 64 WTATKQIKG-HPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLL 115 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 49.3 bits (116), Expect = 1e-08 Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 26/215 (12%) Query: 11 LLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPGIGGIE 70 LL+ DD++ L++ L + G DV A +G A+ +N+ + +V+LDV +P + GIE Sbjct: 4 LLLVDDDIELTELLSTLLELEGFDVE-TANNGLEALQKLNES-YKLVLLDVMMPKLNGIE 61 Query: 71 ACHQIKKIHPQLPVLILTSHSQPALINRL--IEAQAQGYCVKGVAAETLVLAIRSVAAGA 128 +I+K+ +PV++LT+ + I+R+ +E A K L+ I+++ + Sbjct: 62 TLKEIRKV-SNVPVMMLTARGED--IDRVLGLELGADDCLPKPFNDRELIARIKAILRRS 118 Query: 129 FWWDAIASQEIQTAFQHSSSTGAVL----PLADADGEN-PLTKRELEILSLVAKGKSN-- 181 A S I + S G L +A + EN LT E +IL L+ K K N Sbjct: 119 ----ASPSNNISNV-EILSFDGITLHFSHGIATYNEENLNLTDYEFKILCLLLKSKGNVV 173 Query: 182 --QEIADELYIAPGT-----VRVHVHTILRKLEVR 209 +E++ E+ P T + +H+ + RKL R Sbjct: 174 SREELSLEVMEKPLTPFDRSLDMHISNLRRKLPKR 208 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 48.9 bits (115), Expect = 1e-08 Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 4/119 (3%) Query: 8 IRILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQL--FDVVILDVGLPG 65 +RILLVED+ + + L E V DG A Y+ Q + + I+D LPG Sbjct: 1 MRILLVEDETDLGMAIKKVLVSEKY--VVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPG 58 Query: 66 IGGIEACHQIKKIHPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLAIRSV 124 + G+E C +++ LPVL+LT+ +P ++A A Y K L+ +R++ Sbjct: 59 LSGLELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAELLARLRAL 117 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 48.5 bits (114), Expect = 2e-08 Identities = 31/116 (26%), Positives = 60/116 (51%), Gaps = 2/116 (1%) Query: 7 SIRILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPGI 66 S R+L+VE++E + L E G DV+ A DG + D++I++ LPG+ Sbjct: 2 SHRVLVVEEEEKLARFMELELKYE-GYDVS-VARDGLKGFTQAQEFPPDLIIVNGALPGM 59 Query: 67 GGIEACHQIKKIHPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLAIR 122 G+E C +++++ ++P++++T+ ++A A Y VK ++ IR Sbjct: 60 SGLELCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIR 115 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 48.1 bits (113), Expect = 2e-08 Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 8/118 (6%) Query: 10 ILLVEDDELFRLGLVTRLS-QEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPGIGG 68 ILLV+D+ L L Q +DVA + G+T +A +D++ILD LP + G Sbjct: 4 ILLVDDENALTEPLSKALGHQGHTIDVA---DQGKTGLAMAIAGQYDLLILDWMLPQVSG 60 Query: 69 IEACHQIKKIHPQLPVLILTSHSQPALINRL--IEAQAQGYCVKGVAAETLVLAIRSV 124 +E C QI+ + PVL LT ++ L +R+ ++A Y +K L+ +R++ Sbjct: 61 LEICRQIRILGHSTPVLFLT--AKDTLDDRVAGLDAGGDDYLIKPFELRELLARVRAL 116 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 48.1 bits (113), Expect = 2e-08 Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 4/117 (3%) Query: 10 ILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPGIGGI 69 IL+VEDD+ + L +E + DGET + +Q+ D+++LD+ LP + G+ Sbjct: 14 ILIVEDDQEIAQLIRETLEREQFTCIV--TNDGETGLRIFQEQVPDLIVLDLMLPKLDGL 71 Query: 70 EACHQIKKIHPQLPVLILTSHSQPALINRLI--EAQAQGYCVKGVAAETLVLAIRSV 124 E C +I++ IL ++ I+R+I A Y VK + LV +R++ Sbjct: 72 EVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRAL 128 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 47.4 bits (111), Expect = 4e-08 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 6/113 (5%) Query: 3 ISPTSIRILLVEDDELFRLGLVTRLSQEPG-LDVAGEAEDGETAIAYVNQQLFDVVILDV 61 I + +IL+V+DD R+ L L +E +++A E+ T A + + VV+LD Sbjct: 7 IETAAAKILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPE---VVLLDA 63 Query: 62 GLPGIGGIEACHQIKKIH--PQLPVLILTSHSQPALINRLIEAQAQGYCVKGV 112 +P + G C + KI+ P VL++T A ++R EA A Y K + Sbjct: 64 VMPVMDGFACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPI 116 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 47.0 bits (110), Expect = 5e-08 Identities = 31/123 (25%), Positives = 65/123 (52%), Gaps = 5/123 (4%) Query: 7 SIRILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPGI 66 +++ILL ED+ L + ++ G VA A +G+ I + ++ +D+V++D+ +P + Sbjct: 1189 ALQILLAEDN-LVNQKVAHQMLNNLGYPVA-IANNGQEVIDALEKKFYDLVLMDMQMPVM 1246 Query: 67 GGIEACHQIKKIHP---QLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLAIRS 123 GI AC I++ P Q ++ +T+++ P ++A GY K ++ L ++ Sbjct: 1247 DGITACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQLRKVLQD 1306 Query: 124 VAA 126 +A Sbjct: 1307 TSA 1309 >SYNE-PCC-01-002951 ssl0564 Length = 89 Score = 46.2 bits (108), Expect = 9e-08 Identities = 25/57 (43%), Positives = 35/57 (61%) Query: 164 LTKRELEILSLVAKGKSNQEIADELYIAPGTVRVHVHTILRKLEVRDRTQAALLAIE 220 L+ RELEIL LVA G +NQE+++ L I+ TV HV IL K +R + A++ Sbjct: 12 LSDRELEILDLVAIGLTNQEVSERLEISKRTVDNHVSNILTKTNTENRVELVRWALQ 68 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 44.7 bits (104), Expect = 3e-07 Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 11/134 (8%) Query: 9 RILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPGIGG 68 +IL+VED+ R + LSQ+ DV EA D +TAI + + +++LD LPG G Sbjct: 4 KILIVEDECAIREMIALFLSQKY-YDVI-EASDFKTAINKIKENP-KLILLDWMLPGRSG 60 Query: 69 IEACHQIKK--IHPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLAIRSVAA 126 I+ IKK + +P+++LT+ S + A A Y K + + L+ I +V Sbjct: 61 IQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAV-- 118 Query: 127 GAFWWDAIASQEIQ 140 W I Q+ Q Sbjct: 119 ----WRRIYEQQSQ 128 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 43.1 bits (100), Expect = 8e-07 Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 5/117 (4%) Query: 10 ILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPGIGGI 69 ++LV DD + +++ L + G G A+ V Q D+++LD+ +PG+ G+ Sbjct: 19 LILVVDDVKENIYVISELLEGEGYSTTF-VTSGPEALQRVTQAQPDLILLDLMMPGMDGL 77 Query: 70 EACHQIKKIHPQ---LPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLAIRS 123 E C ++K+ PQ +PV+ LT+ ++ + + A Y K + L+ +++ Sbjct: 78 EVCDRLKQ-DPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVKT 133 Score = 39.7 bits (91), Expect = 8e-06 Identities = 36/156 (23%), Positives = 74/156 (47%), Gaps = 7/156 (4%) Query: 4 SPTSIRILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGL 63 S +++ ILL ED+ L + L ++ G V +G+ A++ + + +DVV++DV + Sbjct: 736 SSSNLTILLAEDN-LINQQVAKLLLKKLGYPV-DVVNNGQEALSALAKGDYDVVLMDVEM 793 Query: 64 PGIGGIEACHQIKKIHPQLP---VLILTSHSQPALINRLIEAQAQGYCVKGVAAETL--V 118 P + G+ A I++ + ++ +T++S R + + Y K + E L Sbjct: 794 PEMDGLTATEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKPIRLEALQQA 853 Query: 119 LAIRSVAAGAFWWDAIASQEIQTAFQHSSSTGAVLP 154 L + + A + D +A+ +AF+ S + P Sbjct: 854 LQVAATALQSTSQDRMATVSCVSAFEAKPSPSSPCP 889 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 42.0 bits (97), Expect = 2e-06 Identities = 51/228 (22%), Positives = 95/228 (41%), Gaps = 15/228 (6%) Query: 8 IRILLVEDDELFRLGLVTRL--SQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPG 65 I +LLV+D+ R + L S + +D+A A + A Y+ L +VI D+ +P Sbjct: 56 ISLLLVDDEPGVRESVQAFLEDSGDFKVDLAANATE---AWDYLQHHLPALVISDIMMPQ 112 Query: 66 IGGIEACHQIKKI--HPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLAIRS 123 + G + ++++ LPV+ LT+ + + + K + L +R+ Sbjct: 113 VDGYQFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRN 172 Query: 124 VAAGAFWWDAIASQ--EIQTAFQHSSSTGAVLPLADADGENP------LTKRELEILSLV 175 + A S+ ++Q +Q + + P T RE +L LV Sbjct: 173 LLARQQASSDAGSESAKLQEIYQEIRALKEQIGQPSGIHTTPSPIKLDFTPREQSVLDLV 232 Query: 176 AKGKSNQEIADELYIAPGTVRVHVHTILRKLEVRDRTQAALLAIERRL 223 ++G N+EIA +L + V +V + K RT+ A++ L Sbjct: 233 SQGLMNKEIAAQLKTSVRNVEKYVSRLFTKTGTNSRTELVRFALQHGL 280 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.319 0.136 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,395 Number of Sequences: 78 Number of extensions: 778 Number of successful extensions: 46 Number of sequences better than 1.0e-05: 26 Number of HSP's better than 0.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 13 Number of HSP's that attempted gapping in prelim test: 21 Number of HSP's gapped (non-prelim): 27 length of query: 226 length of database: 48,235 effective HSP length: 60 effective length of query: 166 effective length of database: 43,555 effective search space: 7230130 effective search space used: 7230130 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 91 (39.7 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-001132 sll1672 (834 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-001132 sll1672 1471 0.0 SYNE-PCC-01-000800 sll1228 306 2e-85 SYNE-PCC-01-002879 slr2104 227 1e-61 SYNE-PCC-01-002873 slr2098 213 2e-57 SYNE-PCC-01-002617 slr1759 185 4e-49 SYNE-PCC-01-001280 sll1871 162 4e-42 SYNE-PCC-01-001306 sll1905 146 3e-37 SYNE-PCC-01-000891 sll1353 140 2e-35 SYNE-PCC-01-000295 sll0474 138 8e-35 SYNE-PCC-01-002778 slr1969 118 8e-29 SYNE-PCC-01-001294 sll1888 117 1e-28 SYNE-PCC-01-001509 slr0210 104 1e-24 SYNE-PCC-01-001517 slr0222 88 9e-20 SYNE-PCC-01-000985 sll1475 83 4e-18 SYNE-PCC-01-002788 slr1982 76 5e-16 SYNE-PCC-01-001690 slr0473 66 4e-13 SYNE-PCC-01-002489 slr1588 57 2e-10 SYNE-PCC-01-001133 sll1673 57 2e-10 SYNE-PCC-01-002033 slr0947 55 7e-10 SYNE-PCC-01-002086 slr1042 55 1e-09 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 52 6e-09 SYNE-PCC-01-001575 slr0312 50 2e-08 SYNE-PCC-01-002618 slr1760 49 5e-08 SYNE-PCC-01-002731 slr1909 49 8e-08 SYNE-PCC-01-000414 sll0649 49 8e-08 SYNE-PCC-01-001461 slr0115 47 2e-07 SYNE-PCC-01-001437 slr0081 47 2e-07 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 47 2e-07 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 47 2e-07 SYNE-PCC-01-002672 slr1837 45 7e-07 SYNE-PCC-01-002635 slr1783 45 9e-07 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 1471 bits (3809), Expect = 0.0 Identities = 761/834 (91%), Positives = 761/834 (91%) Query: 1 MQINNHVFKGLADFRSVSWQRQIIVAIAIYGTIYISQLFITYAGTASSPIWIPTGMAVGF 60 MQINNHVFKGLADFRSVSWQRQIIVAIAIYGTIYISQLFITYAGTASSPIWIPTGMAVGF Sbjct: 1 MQINNHVFKGLADFRSVSWQRQIIVAIAIYGTIYISQLFITYAGTASSPIWIPTGMAVGF 60 Query: 61 LSIWGYQVWPGMVGGLLLGEIMALHGLESAANFILTVAITGVVSLVNLFSVYLSDILTAN 120 LSIWGYQVWPGMVGGLLLGEIMALHGLESAANFILTVAITGVVSLVNLFSVYLSDILTAN Sbjct: 61 LSIWGYQVWPGMVGGLLLGEIMALHGLESAANFILTVAITGVVSLVNLFSVYLSDILTAN 120 Query: 121 NYLFSKIKNIIRFIVFVCFGSRLPAAIICPFLLYLFEKISFGLYSEIAYTWLLSDAFALL 180 NYLFSKIKNIIRFIVFVCFGSRLPAAIICPFLLYLFEKISFGLYSEIAYTWLLSDAFALL Sbjct: 121 NYLFSKIKNIIRFIVFVCFGSRLPAAIICPFLLYLFEKISFGLYSEIAYTWLLSDAFALL 180 Query: 181 IVTPFIIACNHNFKVFIKLLQEQWLEAASXXXXXXXXXXXXANGYPIEYLLIPFLLWSAF 240 IVTPFIIACNHNFKVFIKLLQEQWLEAAS ANGYPIEYLLIPFLLWSAF Sbjct: 181 IVTPFIIACNHNFKVFIKLLQEQWLEAASIIFFILLIVKIIANGYPIEYLLIPFLLWSAF 240 Query: 241 RFTEVGXXXXXXXXXXXXXXXXXXDQEKAAIKDQLLLLQSILACISMTTLVLNAVLSENE 300 RFTEVG DQEKAAIKDQLLLLQSILACISMTTLVLNAVLSENE Sbjct: 241 RFTEVGSSLLTIVVSALLVLILALDQEKAAIKDQLLLLQSILACISMTTLVLNAVLSENE 300 Query: 301 RSKNQLFTTNQILIEQNQKLQELYQQRELERAQREKILIEYNESLQKQVDLVRXXXXXXX 360 RSKNQLFTTNQILIEQNQKLQELYQQRELERAQREKILIEYNESLQKQVDLVR Sbjct: 301 RSKNQLFTTNQILIEQNQKLQELYQQRELERAQREKILIEYNESLQKQVDLVRAKEIAES 360 Query: 361 XXXXXXTFVANMSHELRSPLNAIIGFSQLMLRTKNLPMEQYENAGIIQRSGEYLLNLINN 420 TFVANMSHELRSPLNAIIGFSQLMLRTKNLPMEQYENAGIIQRSGEYLLNLINN Sbjct: 361 EAKAKSTFVANMSHELRSPLNAIIGFSQLMLRTKNLPMEQYENAGIIQRSGEYLLNLINN 420 Query: 421 ILDFSKIEAGKTHLNRHNFXXXXXXXXXXXXXXXKAANEGIELIFIRDHDLPRYVYGDEI 480 ILDFSKIEAGKTHLNRHNF KAANEGIELIFIRDHDLPRYVYGDEI Sbjct: 421 ILDFSKIEAGKTHLNRHNFDLYLLLDDLEDMLHLKAANEGIELIFIRDHDLPRYVYGDEI 480 Query: 481 KLRQILLNLLSNAIKFTTEGEVVLTSNFRNAEQQEVINPETSTEPKNKYWLDFTIKDTGK 540 KLRQILLNLLSNAIKFTTEGEVVLTSNFRNAEQQEVINPETSTEPKNKYWLDFTIKDTGK Sbjct: 481 KLRQILLNLLSNAIKFTTEGEVVLTSNFRNAEQQEVINPETSTEPKNKYWLDFTIKDTGK 540 Query: 541 GISEVELSHLFEAFSQTESGRNAQEGTGLGLAITRQFIKLMGGDINVSSVVDQGTTFSFS 600 GISEVELSHLFEAFSQTESGRNAQEGTGLGLAITRQFIKLMGGDINVSSVVDQGTTFSFS Sbjct: 541 GISEVELSHLFEAFSQTESGRNAQEGTGLGLAITRQFIKLMGGDINVSSVVDQGTTFSFS 600 Query: 601 ILVDLGEITLSREPNSAKKVLALTPGQPVYKILVVDDKSVNRQLLIKLLAPFGFEIEEAS 660 ILVDLGEITLSREPNSAKKVLALTPGQPVYKILVVDDKSVNRQLLIKLLAPFGFEIEEAS Sbjct: 601 ILVDLGEITLSREPNSAKKVLALTPGQPVYKILVVDDKSVNRQLLIKLLAPFGFEIEEAS 660 Query: 661 NGQEAIALWESWEPHLIFMDMRMPVMDGYEATKYIKGQVKGNXXXXXXXXXXXXXXXKAI 720 NGQEAIALWESWEPHLIFMDMRMPVMDGYEATKYIKGQVKGN KAI Sbjct: 661 NGQEAIALWESWEPHLIFMDMRMPVMDGYEATKYIKGQVKGNATAVVALTASVLEEEKAI 720 Query: 721 VLSAGCDDFLRKPFRENTIFDSLTKHLGVTYVYESAPNKNDNHEDTALKPESFLIMSQDW 780 VLSAGCDDFLRKPFRENTIFDSLTKHLGVTYVYESAPNKNDNHEDTALKPESFLIMSQDW Sbjct: 721 VLSAGCDDFLRKPFRENTIFDSLTKHLGVTYVYESAPNKNDNHEDTALKPESFLIMSQDW 780 Query: 781 LTQLSHYLLEADTEQVMKLIAEIPASESELEQNLTKLVRRFEFEKILDLIEPLS 834 LTQLSHYLLEADTEQVMKLIAEIPASESELEQNLTKLVRRFEFEKILDLIEPLS Sbjct: 781 LTQLSHYLLEADTEQVMKLIAEIPASESELEQNLTKLVRRFEFEKILDLIEPLS 834 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 306 bits (783), Expect = 2e-85 Identities = 184/491 (37%), Positives = 259/491 (52%), Gaps = 16/491 (3%) Query: 346 QKQVDLVRXXXXXXXXXXXXXTFVANMSHELRSPLNAIIGFSQLMLRTKNLPMEQYENAG 405 Q + L + F+A++SHELR+PLNAIIGFSQL+ R +L + Sbjct: 144 QAETTLTQAKEAADAANRAKTEFLASISHELRTPLNAIIGFSQLLHRDPSLAPHR-PTLD 202 Query: 406 IIQRSGEYLLNLINNILDFSKIEAGKTHLNRHNFXXXXXXXXXXXXXXXKAANEGIELIF 465 II RSGE+LL LIN+IL+ SKIEAG+T LN +A + + L Sbjct: 203 IINRSGEHLLELINDILEMSKIEAGRTTLNEKIIDCHRLLDNLQALFQLRAQEKQLLLKV 262 Query: 466 IRDHDLPRYVYGDEIKLRQILLNLLSNAIKFTTEGEVVLTSNFRNAEQQEVINPETSTEP 525 R ++P ++ D KLRQ+L+NLL+NAIKFT +G V L A P+T Sbjct: 263 ERSPEVPEWIKTDGGKLRQVLINLLANAIKFTAQGGVTLKVKCLTA-------PQTDEGQ 315 Query: 526 KNKYWLDFTIKDTGKGISEVELSHLFEAFSQTESGRNAQEGTGLGLAITRQFIKLMGGDI 585 WL F + DTG GI+ E+ LF F+QTE+G + +G GLGL I+++F++LMGG I Sbjct: 316 GASIWLHFLVSDTGPGIAAHEMDELFVPFAQTETGLKSCQGNGLGLPISQKFVQLMGGQI 375 Query: 586 NVSSVVDQGTTFSFSILVDLGEITLSREPNSAKKVLALTP-GQPVYKILVVDDKSVNRQL 644 V S VDQG+ F F+I V ++ + +P + L P Q K+LVVDD+ +R L Sbjct: 376 QVRSKVDQGSAFFFAIPV---QVMAAPKPTPETSAVTLPPLDQYNQKVLVVDDRPESRLL 432 Query: 645 LIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYEATKYIKGQVKGNXX 704 L +LL GF ++EA NG+ AIALWESW P +I MDM+MPV+DG T+ IK +G Sbjct: 433 LRQLLTSLGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRSTTQKIKASPQGQHT 492 Query: 705 XXXXXXXXXXXXXKAIVLSAGCDDFLRKPFRENTIFDSLTKHLGVTYVYESAPNKNDNHE 764 +A +LSAGCDDFL KPFR + L KHL V + P + Sbjct: 493 IIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIALLAKHLAVALPSQGQPPASPLRP 552 Query: 765 DTALK----PESFLIMSQDWLTQLSHYLLEADTEQVMKLIAEIPASESELEQNLTKLVRR 820 + E Q W +++ LE + + ++ L+ +P L L R Sbjct: 553 FPVITAPSLSEQLAKTPQSWRQKMAKMALECNDDDLITLVESLPTLSPSLAHLLATWARE 612 Query: 821 FEFEKILDLIE 831 + FE+I ++E Sbjct: 613 YRFEQIFLVVE 623 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 227 bits (578), Expect = 1e-61 Identities = 149/454 (32%), Positives = 233/454 (51%), Gaps = 30/454 (6%) Query: 303 KNQLFTTNQILIEQNQKLQELYQQRELERAQREKILIEYNESLQK-QVDLVRXXXXXXXX 361 KN L ++ I+ +LQE E + E+ + E + L+ Q L+ Sbjct: 395 KNNLPLLSRGTIQDVTELQEAQISLEHLNEKLEQRIQERTQELENSQESLLEAKLVAEGA 454 Query: 362 XXXXXTFVANMSHELRSPLNAIIGFSQLMLRTKNLPMEQYENAGIIQRSGEYLLNLINNI 421 F+ANMSHE+R+P+NAIIG S+L+L+T +L +Q +Q +GE LL +INNI Sbjct: 455 TKAKSEFLANMSHEIRTPMNAIIGMSELVLQT-DLTSQQRNYLQKVQYAGELLLGIINNI 513 Query: 422 LDFSKIEAGKTHLNRHNFXXXXXXXXXXXXXXXKAANEGIELIFIRDHDLPRYVYGDEIK 481 LDFSK+EAGK L + F +A +G+ L F D +P + GD ++ Sbjct: 514 LDFSKMEAGKLELEQKPFSVEEVMGNLHSILGIQAEAKGLTLNFHLDPRIPPILVGDRLR 573 Query: 482 LRQILLNLLSNAIKFTTEGEVVLTSNFRNAEQQEVINPETSTEPKNKYWLDFTIKDTGKG 541 L QIL+NL +NA+KFT +GE+ + E ++ L F++ DTG G Sbjct: 574 LSQILINLGNNAVKFTNQGEITIRGQLLKTENEQT-------------KLQFSVTDTGIG 620 Query: 542 ISEVELSHLFEAFSQTESGRNAQ-EGTGLGLAITRQFIKLMGGDINVSSVVDQGTTFSFS 600 ++ + S LF+ F+Q E+ + Q GTGLGLAI++ +LMGGDI + SVV QG+TF F+ Sbjct: 621 LTPDQQSKLFQWFNQGETSTSRQYGGTGLGLAISKSLTELMGGDIWLESVVGQGSTFHFT 680 Query: 601 ILVD-----------LGEITLSREPNSAKKVLALTPGQPVYKILVVDDKSVNRQLLIKLL 649 + + + +++ S + + G IL+V+D +NR+ LL Sbjct: 681 VCLGTASPAVAQDYLVSRVSILEAKPSVTQAITQLEGA---SILLVEDNEINREFAHDLL 737 Query: 650 APFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYEATKYIKGQVKGNXXXXXXX 709 G ++ A+NGQEA+ L S I MD++MP+++GY+AT+ I+ Q Sbjct: 738 TSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYDATRAIRQQEYHRNLPIIAM 797 Query: 710 XXXXXXXXKAIVLSAGCDDFLRKPFRENTIFDSL 743 + L AG +D L KP + + +F +L Sbjct: 798 TANAMAGDQEKALDAGMNDHLTKPIKPDLLFQTL 831 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 213 bits (541), Expect = 2e-57 Identities = 139/410 (33%), Positives = 206/410 (50%), Gaps = 30/410 (7%) Query: 368 FVANMSHELRSPLNAIIGFSQLMLRTKNLPMEQYENAGIIQRSGEYLLNLINNILDFSKI 427 F+ANMSHE+R+P+NA+IG + L L+T P Q E I+ SG++LL +IN+ILDFSKI Sbjct: 530 FLANMSHEIRTPMNAVIGMTHLALKTDLTP-RQREYLHKIRFSGQHLLGVINDILDFSKI 588 Query: 428 EAGKTHLNRHNFXXXXXXXXXXXXXXXKAANEGIELIFIRDHDLPRYVYGDEIKLRQILL 487 EAGK + +F KA N+G+EL+F D +LPR+ GD ++L QIL+ Sbjct: 589 EAGKLPMESIDFDLDKVLDNVATLISEKATNKGLELLFDIDRNLPRHFIGDPLRLGQILI 648 Query: 488 NLLSNAIKFTTEGEVVLTSNFRNAEQQEVINPETSTEPKNKYWLDFTIKDTGKGISEVEL 547 N +NA+KFT +G++ + + Q+V+ L +KDTG GI + Sbjct: 649 NYANNAVKFTEQGDITIVVRLQEYRDQDVV-------------LYLAVKDTGIGIKPEHI 695 Query: 548 SHLFEAFSQTESGRNAQ-EGTGLGLAITRQFIKLMGGDINVSSVVDQGTTFSFSILVDLG 606 ++LF +F Q +S GTGLGLAI ++ +LMGG++ V S QG+TF + + Sbjct: 696 ANLFNSFQQADSSTTRNFGGTGLGLAICKRIAELMGGEVGVESEYGQGSTFWAKVCLQKS 755 Query: 607 EITLSREPNSAKKVLALTPGQPVYKILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAI 666 + R L L+ ++LVVDD R ++ LL F +E +G EA+ Sbjct: 756 NVIPHR--------LVLSKDLEGKRVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEAL 807 Query: 667 ALWESWE----PH-LIFMDMRMPVMDGYEATKYIKGQVKGNXXXXXXXXXXXXXXXKAIV 721 + PH ++F+D +MP MDG E + +K + Sbjct: 808 NFLAEADRENHPHSIVFIDWQMPNMDGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKA 867 Query: 722 LSAGCDDFLRKPFRENTIFDSLTKHLG--VTYVYESAPNKNDNHEDTALK 769 S G DD L KP + +FDSL + LG E + ED AL+ Sbjct: 868 KSLGIDDVLVKPISPSVLFDSLARVLGDPTALAQEMRQSSGIGAEDLALE 917 Score = 59.7 bits (143), Expect = 4e-11 Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 6/137 (4%) Query: 631 KILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYE 690 +IL+V+D +N+++ +LL GF ++ A+NG A+ + L+ MDM+MP MDG E Sbjct: 926 RILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIE 985 Query: 691 ATKYIKGQVKGNXXXXXXXXXXXXXXXKAIVLSAGCDDFLRKPFRENTIFDSLTKHLGV- 749 AT I+ + + L AG +D L KP +++ L + V Sbjct: 986 ATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEELWNKLLHWIPVD 1045 Query: 750 -----TYVYESAPNKND 761 + ESA N +D Sbjct: 1046 SPLAPETIEESAINTSD 1062 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 185 bits (470), Expect = 4e-49 Identities = 147/485 (30%), Positives = 238/485 (49%), Gaps = 43/485 (8%) Query: 274 QLLLLQSILACISMTTLVLNAVLSENERSKNQLFTTNQILIEQNQKLQELYQQRELERAQ 333 Q ++S LA + N +++ ++ + +++T ++I + L+ + +Q + AQ Sbjct: 689 QRFQVKSFLAVRTSYQGKANGIIALHQCDRQRVWTADEI-----ELLEAIAEQMGIALAQ 743 Query: 334 R---EKILIEYNESLQKQVDLVRXXXXXXXXXXXXXTFVANMSHELRSPLNAIIGFSQLM 390 EK E QK ++L + F+A MSHE+R+P+N +IG ++L+ Sbjct: 744 AALLEKERERRRELAQKNLELEKATWAAEAANRAKGEFLAMMSHEIRTPMNGVIGMTELL 803 Query: 391 LRTKNLPMEQYENAGIIQRSGEYLLNLINNILDFSKIEAGKTHLNRHNFXXXXXXXXXXX 450 + T +L ++Q + I++SGE LL +IN+ILDFSKIEA K L F Sbjct: 804 IMT-DLNLQQLDYVQTIRQSGETLLTIINDILDFSKIEADKLVLETQAFELRPLIETVLE 862 Query: 451 XXXXKAANEGIELIFIRDHDLPRYVYGDEIKLRQILLNLLSNAIKFTTEGEVVLT---SN 507 A + +EL + D P + GD+++LRQIL NL+ NA+KFT +GEVVLT Sbjct: 863 MFGPIARAKHLELTYGIDPQTPARILGDQVRLRQILSNLIGNALKFTEKGEVVLTVKGEP 922 Query: 508 FRNAEQQEVINPETSTEPKNKYWLDFTIKDTGKGISEVELSHLFEAFSQTESGRNAQ-EG 566 F AE I P + + F ++DTG GI LF++FSQ +S + G Sbjct: 923 FDPAESYHTI----LNLPHPSHRICFNLRDTGIGIPLDRQDRLFKSFSQVDSSTTRKYGG 978 Query: 567 TGLGLAITRQFIKLMGGDINVSSVVDQGTTFSFSILVDLGEITLSREPNSAKKVLALTPG 626 TGLGL I+++ ++MGG + V+S G+ F F IL L+ E +S +++ Sbjct: 979 TGLGLVISQRLTQMMGGVLTVTSEPGVGSNFRFCILTTAQAPALA-EADSVQQMKG---- 1033 Query: 627 QPVYKILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHL--IFMDMRMP 684 ++L+VDD NR++L +G ++G+ A+ W + P L +D++MP Sbjct: 1034 ---KQVLIVDDNETNRRILQDQCQAWGLVCHCFTSGESALD-WFARCPDLDAAILDLQMP 1089 Query: 685 VMDGYEATKYIKGQVKGNXXXXXXXXXXXXXXXKAIVLSAGCDDF------LRKPFRENT 738 MDG +++ +G L AG D+ L KP R++ Sbjct: 1090 NMDGITLAHHLRQFAQGKDLPIILLSSG---------LVAGADELSVFQTVLNKPVRQSL 1140 Query: 739 IFDSL 743 IFDSL Sbjct: 1141 IFDSL 1145 Score = 58.2 bits (139), Expect = 1e-10 Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 1/114 (0%) Query: 627 QPVYKILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVM 686 QP +IL+ +D VN+++ ++L G+ + A+NGQE I E L+ MDM+MPVM Sbjct: 1187 QPALQILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVM 1246 Query: 687 DGYEATKYIKGQVK-GNXXXXXXXXXXXXXXXKAIVLSAGCDDFLRKPFRENTI 739 DG A ++I+ + + L AG D ++ KP N + Sbjct: 1247 DGITACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQL 1300 >SYNE-PCC-01-001280 sll1871 Length = 674 Score = 162 bits (410), Expect = 4e-42 Identities = 111/304 (36%), Positives = 169/304 (55%), Gaps = 23/304 (7%) Query: 304 NQLFTTNQILIEQNQKLQELYQQRELERAQREKILIEYNESLQKQVDLVRXXXXXXXXXX 363 N+L +N L ++NQ+L+ +Q + + E+ + + E L+ V + Sbjct: 376 NELRESNSSLEKKNQELELAQKQLAVANSCLEEKVQQRTEELENTVKALELASSEAEAAN 435 Query: 364 XXXT-FVANMSHELRSPLNAIIGFSQLMLR-TKNLPMEQY-ENAGIIQRSGEYLLNLINN 420 + F+ANMSHELR+PLNAIIG+S++++ ++L E+ + I RSG+ LL LIN+ Sbjct: 436 ATKSIFLANMSHELRTPLNAIIGYSEMLIEEAEDLDSEELVPDLDKILRSGKSLLALIND 495 Query: 421 ILDFSKIEAGKT--HLNRHNFXXXXXXXXXXXXXXXKAANEGIELIFIRDHDLPRYVYGD 478 +LD SKIEAGK +L N K N +E+ + + VYGD Sbjct: 496 LLDISKIEAGKMELYLETFNLKELIAGILDTISPLLKNNNNKLEVEISLESE---EVYGD 552 Query: 479 EIKLRQILLNLLSNAIKFTTEGEVVLTSNFRNAEQQEVINPETSTEPKNKYWLDFTIKDT 538 IKLRQ +LNLLSNA KFT +G + I E + K+ WL F +KDT Sbjct: 553 LIKLRQGILNLLSNASKFTKDGII------------SFIVEEFKVDEKD--WLSFQVKDT 598 Query: 539 GKGISEVELSHLFEAFSQTESGRNAQEG-TGLGLAITRQFIKLMGGDINVSSVVDQGTTF 597 G G++E ++S LF+ F+Q +S + G TGLGLAITR+F ++MGGDI ++S + G++F Sbjct: 599 GIGLTEEQMSKLFQPFTQADSSTTRKYGGTGLGLAITRKFCQMMGGDIYLTSEIGVGSSF 658 Query: 598 SFSI 601 + + Sbjct: 659 TIKL 662 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 146 bits (368), Expect = 3e-37 Identities = 106/274 (38%), Positives = 149/274 (54%), Gaps = 21/274 (7%) Query: 314 IEQNQKLQELY-QQRELERAQREKILIEYNESLQKQVDLVRXXXXXXXXXXXXXTFVANM 372 I Q ++++ + Q E+ER R++ L E N+ +LV F+A M Sbjct: 276 ISQRKQVEMIQGQSLEMERRMRQQ-LAEQNQ------ELVAATTAAEAANRSKSEFLATM 328 Query: 373 SHELRSPLNAIIGFSQLMLRTKNLPMEQYENAGIIQRSGEYLLNLINNILDFSKIEAGKT 432 SHE+R+P+NAIIG + L+L T +L +Q A I+ SGE LL LIN+ILDFSKIEAGK Sbjct: 329 SHEIRTPMNAIIGMTGLLLDT-DLTTQQKYFAQTIRNSGETLLTLINDILDFSKIEAGKL 387 Query: 433 HLNRHNFXXXXXXXXXXXXXXXKAANEGIELIFIRDHDLPRYVYGDEIKLRQILLNLLSN 492 L + F A + + LI +P + GD +LRQIL+NLLSN Sbjct: 388 DLEVYPFDLGQCLEEALDVVVPSARQKSLTLIRRFLTPIPPNLQGDVTRLRQILVNLLSN 447 Query: 493 AIKFTTEGEVVLTSNFRNAEQQEVINPETSTEPKNKYWLDFTIKDTGKGISEVELSHLFE 552 A+KFT G+V +T EV++ + + K +Y + F ++DTG GI+ + LF+ Sbjct: 448 AVKFTEAGQVKVT--------VEVVDHDAA---KGEYQICFAVQDTGIGIAPNQQQALFQ 496 Query: 553 AFSQTESGRNAQ-EGTGLGLAITRQFIKLMGGDI 585 AFSQ S + GTGLGLAI + LMGG I Sbjct: 497 AFSQGNSSITRRFGGTGLGLAICVRLTALMGGTI 530 Score = 57.8 bits (138), Expect = 1e-10 Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 1/113 (0%) Query: 632 ILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYEA 691 IL+ +D +N+Q+ LL G+ ++ +NGQEA++ + ++ MD+ MP MDG A Sbjct: 742 ILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTA 801 Query: 692 TKYI-KGQVKGNXXXXXXXXXXXXXXXKAIVLSAGCDDFLRKPFRENTIFDSL 743 T++I + Q + + L++G +D++ KP R + +L Sbjct: 802 TEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKPIRLEALQQAL 854 Score = 47.8 bits (112), Expect = 1e-07 Identities = 31/118 (26%), Positives = 49/118 (41%) Query: 630 YKILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGY 689 + ILVVDD N ++ +LL G+ ++G EA+ +P LI +D+ MP MDG Sbjct: 18 FLILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQPDLILLDLMMPGMDGL 77 Query: 690 EATKYIKGQVKGNXXXXXXXXXXXXXXXKAIVLSAGCDDFLRKPFRENTIFDSLTKHL 747 E +K + + G D++ KPF + + HL Sbjct: 78 EVCDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVKTHL 135 >SYNE-PCC-01-000891 sll1353 Length = 998 Score = 140 bits (352), Expect = 2e-35 Identities = 108/328 (32%), Positives = 172/328 (52%), Gaps = 34/328 (10%) Query: 287 MTTLVLNAVLSE----NERSKNQLFTTNQILIEQNQKLQELYQQRELERAQREKILIEYN 342 +T + L + +SE NE L T L Q + +++ E+ A+R LI N Sbjct: 514 LTPIALRSEVSEVITLNENFNEMLIT----LQNQFKIIKQAKDNLEMRVAERTHTLIVIN 569 Query: 343 ESLQKQVD--------LVRXXXXXXXXXXXXXTFVANMSHELRSPLNAIIGFSQLMLRTK 394 + L +++ L F+AN+SHE+R+P+NAI+GF L+L+ K Sbjct: 570 KQLAGEIEERQRIEIKLREAKESAELANRVKSEFLANISHEIRTPMNAILGFCDLLLQ-K 628 Query: 395 NLPMEQ---YENAGIIQRSGEYLLNLINNILDFSKIEAGKTHLNRHNFXXXXXXXXXXXX 451 +L + Q Y NA I S + LL LI++ILD SKIEAGK ++ Sbjct: 629 DLSLSQTKKYLNA--IGSSSKILLALIDDILDISKIEAGKLVIHLEPVDLRVIIREIKQI 686 Query: 452 XXXKAANEGIELIFIRDHDLPRYVYGDEIKLRQILLNLLSNAIKFTTEGEVVLTSNFRNA 511 KA ++ + L D L + +Y D ++LRQIL NL+ NA+KFT EG+V + + Sbjct: 687 FDYKAESKSLLLTIQIDETLNQAIYFDAVRLRQILFNLVGNALKFTEEGQVFI---YIGV 743 Query: 512 EQQEVINPETSTEPKNKYWLDFTIKDTGKGISEVELSHLFEAFSQTESGRNAQE--GTGL 569 E +V + T L + DTG GI+ + + +F+ F+Q++ G++ ++ GTGL Sbjct: 744 EGIQVRSQGTYIS------LAIEVTDTGIGIAPEDQAKIFDVFTQSQ-GQSTRKYGGTGL 796 Query: 570 GLAITRQFIKLMGGDINVSSVVDQGTTF 597 GL ITR+ L+GG+I++SS + +G+TF Sbjct: 797 GLTITRRLTALLGGEISLSSRLGEGSTF 824 >SYNE-PCC-01-000295 sll0474 Length = 806 Score = 138 bits (347), Expect = 8e-35 Identities = 87/237 (36%), Positives = 138/237 (58%), Gaps = 11/237 (4%) Query: 368 FVANMSHELRSPLNAIIGFSQLMLRTKNLPM--EQYENAGIIQRSGEYLLNLINNILDFS 425 F+ANMSHELR+PLN+I+G + + P+ +Q ++ I++ SG +LL+LIN+ILD S Sbjct: 421 FLANMSHELRTPLNSILGMIETLQNQVYGPLNGKQVQSLEIVENSGRHLLSLINDILDLS 480 Query: 426 KIEAGKTHLNRHNFXXXXXXXXXXXXXXXKAANEGIELIFIRDHDLPRYVYGDEIKLRQI 485 KIEAG+ L+ + A + I L +LP V D+ +L Q+ Sbjct: 481 KIEAGRMDLDLNPTSVSALVNHSLTFVQQFAIQKQINLSSEIIPNLPD-VLVDKRRLCQV 539 Query: 486 LLNLLSNAIKFTTEGEVVLTSNFRNAEQQEVINPETSTEPKNKYWLDFTIKDTGKGISEV 545 L+NLL+NAIKFT EG V+ Q ++I + ++ L FT+ DTG GI Sbjct: 540 LINLLNNAIKFTPEGGKVVV-------QADLIKEQGKENSQSPPQLSFTVFDTGIGIEAD 592 Query: 546 ELSHLFEAFSQTESGRNAQ-EGTGLGLAITRQFIKLMGGDINVSSVVDQGTTFSFSI 601 L+++FE F Q +S N + +GTGLGL++ ++ ++L GG + V+S +++G+ F +I Sbjct: 593 RLNNIFEPFVQIDSALNRRYDGTGLGLSLVKKIVELHGGSVTVTSKLNEGSRFKITI 649 >SYNE-PCC-01-002778 slr1969 Length = 750 Score = 118 bits (295), Expect = 8e-29 Identities = 112/421 (26%), Positives = 187/421 (44%), Gaps = 38/421 (9%) Query: 323 LYQQRELERAQREKILIEYNESLQKQVDLVRXXXXXXXXXXXXXTFVANMSHELRSPLNA 382 LY + + ++ EK +IE + L+ + F+ N+SHELR+PL + Sbjct: 343 LYSEVQKQKNNFEKRVIERTKELRDTL------MAAQAANLLKSQFINNISHELRTPLTS 396 Query: 383 IIGFSQLMLRTKNLPM------EQYENAGIIQRSGEYLLNLINNILDFSKIEAGKTHLNR 436 IIG S +LR + P +QY I Q +G+ LL+ IN+I+ S++E+G+T LN Sbjct: 397 IIGLSATLLRWFDHPASLPPAKQQYYLLNI-QENGKKLLDQINSIIQLSQLESGQTALNC 455 Query: 437 HNFXXXXXXXXXXXXXXXKAANEGIELIFIRDHDLPRYVY-GDEIKLRQILLNLLSNAIK 495 +F A + I L ++ + + D+ +L QIL LL+NA+K Sbjct: 456 QSFSLHTLAQTVIHSLLGVAIKQQINLELDYQINVGQDQFCADQERLDQILTQLLNNALK 515 Query: 496 FTTEGEVVLTSNFRNAEQQEVINPETSTEPKNKYWLDFTIKDTGKGISEVELSHLFEAFS 555 FT V+ ++ + Q F ++DTG GI+E +L LFEAF Sbjct: 516 FTPAEGTVILRIWKESNQAI-----------------FQVEDTGIGINEQQLPVLFEAFK 558 Query: 556 QT-ESGRNAQEGTGLGLAITRQFIKLMGGDINVSSVVDQGTTFSFSILVDLGEITLSREP 614 +S + E G+GLA+T+Q ++L GG I V S QGT F+ ++ + + Sbjct: 559 VAGDSYTSFYETGGVGLALTKQLVELHGGYIEVESSPGQGTI--FTTVIPQQNFPPTTKG 616 Query: 615 NSAKKVLALTPGQPVYKILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEP 674 K+ A P ++V++ L+ +LL +++ + A+ E +P Sbjct: 617 QVQDKLDAAMPFNS--SVIVIEQDEEIATLICELLTVANYQVIWLIDTTNALQQVELLQP 674 Query: 675 HLIFMDMRMPVMDGYEATKYIKGQVKGNXXXXXXXXXXXXXXXKAIVLSAGCDDFLRKPF 734 LI +D +D E T+ IK + + + G DD+L KP Sbjct: 675 GLIIVD--GDFVDVTEVTRGIKKSRRISKVTVFLLSESLSSAEWQALSQKGIDDYLLKPL 732 Query: 735 R 735 + Sbjct: 733 Q 733 >SYNE-PCC-01-001294 sll1888 Length = 432 Score = 117 bits (294), Expect = 1e-28 Identities = 81/248 (32%), Positives = 128/248 (51%), Gaps = 26/248 (10%) Query: 368 FVANMSHELRSPLNAIIGFSQLMLRTK-NLPMEQYENAGIIQRSGEYLLNLINNILDFSK 426 F+A+ +HELR+PLN IIGF +L+L + E++E +S LLNLIN+ILD +K Sbjct: 197 FLASTTHELRTPLNGIIGFLRLILDDMADSEAEKHEFVEEAYQSALLLLNLINDILDLAK 256 Query: 427 IEAGKTHLNRHNFXXXXXXXXXXXXXXXKAANEGIELIFIRDHDLPRYVYGDEIKLRQIL 486 IEAG+ + +A N+G+ + P VYG++ L Q++ Sbjct: 257 IEAGRVGIELEVVDFSEVLQATENFALPQAQNKGLSFNLTAPNQGPLLVYGNQRWLLQVM 316 Query: 487 LNLLSNAIKFTTEGEVVLTSNFRNAEQQEVINPETSTEPKNKYW--------LDFTIKDT 538 LN++ NAIKFT EG + + P+ W L ++ DT Sbjct: 317 LNIVGNAIKFTHEGGITVA---------------VEVMPRTVLWEGVQKPGLLKVSVGDT 361 Query: 539 GKGISEVELSHLFEAFSQTE-SGRNAQEGTGLGLAITRQFIKLMGGDINVSSVVD-QGTT 596 G G+S + S LF+ F Q + S A GTGLGL I+++ ++ MGG + S+ + G+T Sbjct: 362 GIGVSLEQQSKLFKKFVQIDGSHSKAYGGTGLGLVISQKLVETMGGKVAFFSMGEGLGST 421 Query: 597 FSFSILVD 604 +F++L++ Sbjct: 422 VTFTVLLE 429 >SYNE-PCC-01-001509 slr0210 Length = 417 Score = 104 bits (260), Expect = 1e-24 Identities = 77/234 (32%), Positives = 118/234 (50%), Gaps = 24/234 (10%) Query: 369 VANMSHELRSPLNAIIGFSQLMLRTK---NLPMEQYENAGIIQRSGEYLLNLINNILDFS 425 ++++ HE R+PL AIIGF++ MLR + L +Q++ S E+LL+L+N+ LD S Sbjct: 190 LSHIHHEFRTPLTAIIGFAR-MLRDELYGKLNPKQHQYVQGTLNSAEHLLSLVNDFLDLS 248 Query: 426 KIEAGKTHLNRHNFXXXXXXXXXXXXXXXKAANEGIELIFIRDHDLPRYVYGDEIKLRQI 485 KI+A L KA + + L D + + Y D+ + +QI Sbjct: 249 KIDARCEELFYEQVAVEDLCLAVISMVQTKAKEKQLALNLTIDDGVD-FCYVDQRRWKQI 307 Query: 486 LLNLLSNAIKFTTEGEVVLTSNFRNAEQQEVINPETSTEPKNKYWLDFTIKDTGKGISEV 545 L+NLLSN +KFT +G V L + L F++ DTG GI Sbjct: 308 LINLLSNGVKFTPKGSVTLAVKATDKA------------------LIFSVIDTGIGIDPE 349 Query: 546 ELSHLFEAFSQTESGRN-AQEGTGLGLAITRQFIKLMGGDINVSSVVDQGTTFS 598 + LF+ F Q + A++GTGLGLA++R+ +L GGDI ++S G+ FS Sbjct: 350 DQRDLFQPFKQISHPPSFAEKGTGLGLALSRRLAQLHGGDIQLTSTPGVGSCFS 403 >SYNE-PCC-01-001517 slr0222 Length = 1178 Score = 88.2 bits (217), Expect = 9e-20 Identities = 75/254 (29%), Positives = 114/254 (44%), Gaps = 27/254 (10%) Query: 348 QVDLVRXXXXXXXXXXXXXTFVANMSHELRSPLNAIIGFSQLML----RTKNLPMEQYEN 403 +++ +R FV +SHE R+PL +IIGF +L+ R +QY N Sbjct: 923 EIETLRSLVKERELNEAKSQFVDIVSHEFRTPLTSIIGFGELLSKYFDRLSTEKKQQYIN 982 Query: 404 AGIIQRSGEYLLNLINNILDFSKIEAGKTHLNRHNFXXXXXXXXXXXXXXXKAANE-GIE 462 IQ S + L LI+++L S+ +A K + N +E E Sbjct: 983 N--IQNSSQRLKQLIDDVLSISRYDANKIEIELGNINLRNLANDLIENFSCGLGSEHNFE 1040 Query: 463 LIFIRDHDLPRYVYGDEIKLRQILLNLLSNAIKFTTEGEVVLTSNFRNAEQQEVINPETS 522 L + D V D LR IL N+LSNAIK++ G + T Sbjct: 1041 LNYHLKPDEHSLV--DVRLLRHILENILSNAIKYSAPGSTI-----------------TL 1081 Query: 523 TEPKNKYWLDFTIKDTGKGISEVELSHLFEAFSQTESGRNAQEGTGLGLAITRQFIKLMG 582 K++ L F ++D G GI + LFEAF + + + GTGLGL+I +++++ G Sbjct: 1082 DISKDEEHLLFQVRDEGIGIPLQDQEKLFEAFHRASNVGDIP-GTGLGLSIVKRYVEFQG 1140 Query: 583 GDINVSSVVDQGTT 596 G I V S+ +GTT Sbjct: 1141 GTIEVISMPGKGTT 1154 >SYNE-PCC-01-000985 sll1475 Length = 297 Score = 82.8 bits (203), Expect = 4e-18 Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 23/237 (9%) Query: 368 FVANMSHELRSPLNAIIGFSQLMLRTKNL---PMEQYENAGIIQRSGEYLLNLINNILDF 424 F + SHE R+PL+ + +QL+ ++ P ++ N IQ S + ++ L+++IL Sbjct: 72 FFSMASHEFRTPLSTALAAAQLLENSEVAWLDPDKRSRNLHRIQNSVKNMVQLLDDILII 131 Query: 425 SKIEAGKTHLNRHNFXXXXXXXXXXXXXXXKAANEGIELIFIRDHDLPRYVYGDEIKLRQ 484 ++ EAGK N + +++ D V DE +R Sbjct: 132 NRAEAGKLEFNPNWLDLKLLFQQFIEEIQLSVSDQYYFDFICSAQDTKALV--DERLVRS 189 Query: 485 ILLNLLSNAIKFTTEGEVVLTSNFRNAEQQEVINPETSTEPKNKYWLDFTIKDTGKGISE 544 IL NLLSNAIK++ G + + ++EQ + F + D G GIS Sbjct: 190 ILSNLLSNAIKYSPGGGQIKIALSLDSEQ-----------------IIFEVTDQGIGISP 232 Query: 545 VELSHLFEAFSQTESGRNAQEGTGLGLAITRQFIKLMGGDINVSSVVDQGTTFSFSI 601 + +FE F + ++ RN GTGLGL + ++ + L G I + S VDQGTT + + Sbjct: 233 EDQKQIFEPFHRGKNVRNIT-GTGLGLMVAKKCVDLHSGSILLKSAVDQGTTVTICL 288 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 75.9 bits (185), Expect = 5e-16 Identities = 37/103 (35%), Positives = 58/103 (56%) Query: 631 KILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYE 690 K+L+V+D +NR +L + L G+E+ A +G++A+ + S P LI MDM +P++DG+ Sbjct: 6 KVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGWT 65 Query: 691 ATKYIKGQVKGNXXXXXXXXXXXXXXXKAIVLSAGCDDFLRKP 733 ATK IKG G + ++AGCDD+ KP Sbjct: 66 ATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKP 108 >SYNE-PCC-01-001690 slr0473 Length = 748 Score = 66.2 bits (160), Expect = 4e-13 Identities = 74/293 (25%), Positives = 123/293 (41%), Gaps = 41/293 (13%) Query: 319 KLQEL-YQQRELERAQREKILIEYNESLQKQVDLVRXXXXXXXXXXXXXTFVANMSHELR 377 +LQ L +Q E++ A K I N L++ +L + F SH+L+ Sbjct: 483 RLQSLPWQSVEIQSALALKKAI-VNLILRQAEELAQLARNLERSNADLKKFAYIASHDLQ 541 Query: 378 SPLNAIIGFSQLM-LRTKNLPMEQYENAGIIQRSGEYLLN-LINNILDFSKIEAGKTHLN 435 PLN + + QL+ +R E ++ +G L+ LI++IL ++K++ L Sbjct: 542 EPLNQVSNYVQLLEMRYSEALDEDAKDFIDFAVTGVSLMQTLIDDILTYAKVDTQYAQLT 601 Query: 436 RHNFXXXXXXXXXXXXXXXKAANEGIELIFIRDHDLPRYVYGDEIKLRQILLNLLSNAIK 495 + + + IE+ +P V D+I+L Q+ NL++N IK Sbjct: 602 FTDVQEVVDKALANLKQRIEESGAEIEV-----GSMPA-VMADQIQLMQVFQNLIANGIK 655 Query: 496 FTTEGEVVLTSNFRNAEQQEVINPETSTEPKNKYWLD-------FTIKDTGKGISEVELS 548 F + PK K W D F ++D G GI Sbjct: 656 FAGD-----------------------KSPKIKIWGDRQEDAWVFAVQDNGIGIDPQFFE 692 Query: 549 HLFEAFSQTESGRNAQEGTGLGLAITRQFIKLMGGDINVSSVVDQGTTFSFSI 601 +F F + + R+ +GTG+GLAI ++ I+ G I + S +G+TF FSI Sbjct: 693 RIFVIFQRLHT-RDEYKGTGMGLAICKKIIEGHQGQIWLESNPGEGSTFYFSI 744 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 57.0 bits (136), Expect = 2e-10 Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 2/118 (1%) Query: 632 ILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWE--PHLIFMDMRMPVMDGY 689 ILVV+D+++ R+L+ + L+ ++I EA NG A+ L S E P LI D+ MP MDG+ Sbjct: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 Query: 690 EATKYIKGQVKGNXXXXXXXXXXXXXXXKAIVLSAGCDDFLRKPFRENTIFDSLTKHL 747 ++ K +++G DD+L KPF++ + +++ L Sbjct: 64 GLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSRL 121 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 57.0 bits (136), Expect = 2e-10 Identities = 32/104 (30%), Positives = 50/104 (48%) Query: 632 ILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYEA 691 IL+VDD N QLL LL G+ + ++G+ A+ + P LI +D++MP MDGY+ Sbjct: 11 ILLVDDLPNNLQLLSDLLINLGYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQV 70 Query: 692 TKYIKGQVKGNXXXXXXXXXXXXXXXKAIVLSAGCDDFLRKPFR 735 + IK + + K G D++ KPF+ Sbjct: 71 CEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQ 114 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 55.5 bits (132), Expect = 7e-10 Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 3/101 (2%) Query: 634 VVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYEATK 693 +VDD++ R++L L+ G+E+ A++G+EAIA + +P L+ +D+ MP +DGY + Sbjct: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 Query: 694 YIKGQVKGNXXXXXXXXXXXXXXXKAIVLSAGCDDFLRKPF 734 ++ K + + L G DD++ KPF Sbjct: 61 ELR---KESDIPIIMLTALGDVADRITGLELGADDYVVKPF 98 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 54.7 bits (130), Expect = 1e-09 Identities = 28/104 (26%), Positives = 53/104 (50%) Query: 632 ILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYEA 691 +L+V+D S R+++ +L G+++ A +G EA+ +++ P L+ +D+ MP M+GYE Sbjct: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 Query: 692 TKYIKGQVKGNXXXXXXXXXXXXXXXKAIVLSAGCDDFLRKPFR 735 + IK K + + G D ++ KPF+ Sbjct: 90 CRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQ 133 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 52.4 bits (124), Expect = 6e-09 Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 6/110 (5%) Query: 631 KILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAI-ALWESWEPHLIFMDMRMPVMDGY 689 K+L+VDD +LL LL GF++E A+NG EA+ L ES++ L+ +D+ MP ++G Sbjct: 3 KLLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKLNESYK--LVLLDVMMPKLNGI 60 Query: 690 EATKYIKGQVKGNXXXXXXXXXXXXXXXKAIVLSAGCDDFLRKPFRENTI 739 E K I+ K + + + L G DD L KPF + + Sbjct: 61 ETLKEIR---KVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDREL 107 >SYNE-PCC-01-001575 slr0312 Length = 209 Score = 50.4 bits (119), Expect = 2e-08 Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 5/125 (4%) Query: 631 KILVVDDKSVNRQLLIKLLA--PFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDG 688 ++L+ DD ++ RQ L ++ P I +A NG++AIAL+E +P + MD+RMP ++G Sbjct: 8 RVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPEVEG 67 Query: 689 YEATKYIKGQVKGNXXXXXXXXXXXXXXXKAIVLSAGCDDFLRKPFRENTIFDSL-TKHL 747 A I VK + L AG +L K + + +++ T H Sbjct: 68 VAAISAICAIVKFARIIVLTTYDSDEDIYRG--LQAGAKGYLLKETEPDELLNAIRTVHR 125 Query: 748 GVTYV 752 G Y+ Sbjct: 126 GQKYI 130 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 49.3 bits (116), Expect = 5e-08 Identities = 25/59 (42%), Positives = 35/59 (59%) Query: 631 KILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGY 689 KILVVDD R L L G +E A+NG+EA+ + +P ++ +D MPVMDG+ Sbjct: 13 KILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGF 71 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 48.5 bits (114), Expect = 8e-08 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 2/106 (1%) Query: 630 YKILVVDDKSVNRQLLIKLLAPF-GFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDG 688 Y +L+VDD N LL+K + G+++ A NG+EA+ L + P +I D+ MP MDG Sbjct: 8 YHLLLVDDDP-NLLLLVKDYLEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDG 66 Query: 689 YEATKYIKGQVKGNXXXXXXXXXXXXXXXKAIVLSAGCDDFLRKPF 734 Y + ++ + + L+ G D ++ KPF Sbjct: 67 YAFIEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPF 112 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 48.5 bits (114), Expect = 8e-08 Identities = 29/103 (28%), Positives = 47/103 (45%) Query: 632 ILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYEA 691 IL+V+D QL+ + L F ++G+ + +++ P LI +D+ +P +DG E Sbjct: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLEV 73 Query: 692 TKYIKGQVKGNXXXXXXXXXXXXXXXKAIVLSAGCDDFLRKPF 734 I+ Q + I LS G DD+L KPF Sbjct: 74 CTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPF 116 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 47.4 bits (111), Expect = 2e-07 Identities = 26/104 (25%), Positives = 49/104 (47%) Query: 631 KILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYE 690 +IL++DD L+ L G+++++A +G + AL +P LI +D+ +P +DG+ Sbjct: 3 RILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFT 62 Query: 691 ATKYIKGQVKGNXXXXXXXXXXXXXXXKAIVLSAGCDDFLRKPF 734 + ++ + K +G DD+L KPF Sbjct: 63 VCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPF 106 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 47.4 bits (111), Expect = 2e-07 Identities = 28/114 (24%), Positives = 55/114 (48%), Gaps = 9/114 (7%) Query: 628 PVYKILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEP-------HLIFMD 680 P ++ILVV+D+ R+ ++ L G+E+ +G++A+AL + + LI +D Sbjct: 29 PSHRILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILD 88 Query: 681 MRMPVMDGYEATKYIKGQVKGNXXXXXXXXXXXXXXXKAIVLSAGCDDFLRKPF 734 + +P ++G + + ++ G+ K L G DD++ KPF Sbjct: 89 IMLPQVNGLDVCRSLR--FGGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPF 140 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 47.4 bits (111), Expect = 2e-07 Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 1/104 (0%) Query: 631 KILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYE 690 KIL+V+D+ R+++ L+ +++ EAS+ + AI + P LI +D +P G + Sbjct: 4 KILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKE-NPKLILLDWMLPGRSGIQ 62 Query: 691 ATKYIKGQVKGNXXXXXXXXXXXXXXXKAIVLSAGCDDFLRKPF 734 +YIK Q L+AG DD++ KPF Sbjct: 63 FIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPF 106 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 47.0 bits (110), Expect = 2e-07 Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 5/111 (4%) Query: 631 KILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYE 690 KILVV+D+ V R L + G+++ EA NG E + + +L+ MD+ +P +G Sbjct: 5 KILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGLL 64 Query: 691 ATKYIKGQVKGNXXXXXXXXXXXXXXXKAIVLSAGCDDFLRKPF--RENTI 739 + ++ ++ K + L G DD+L KPF RE TI Sbjct: 65 LARELREEL---SLPLIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTI 112 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 45.4 bits (106), Expect = 7e-07 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 2/103 (1%) Query: 632 ILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYEA 691 IL+VDD++ + L K L G I+ A G+ +A+ + + L+ +D +P + G E Sbjct: 4 ILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGLEI 63 Query: 692 TKYIKGQVKGNXXXXXXXXXXXXXXXKAIVLSAGCDDFLRKPF 734 + I+ + G+ + L AG DD+L KPF Sbjct: 64 CRQIR--ILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPF 104 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 45.1 bits (105), Expect = 9e-07 Identities = 27/108 (25%), Positives = 46/108 (42%) Query: 627 QPVYKILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVM 686 +P+ +LV D+ V + L F+++ A+N EA + P L+ D+ MP + Sbjct: 54 EPISLLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQV 113 Query: 687 DGYEATKYIKGQVKGNXXXXXXXXXXXXXXXKAIVLSAGCDDFLRKPF 734 DGY+ + ++ + + GCD FL KPF Sbjct: 114 DGYQFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPF 161 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.321 0.138 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,952 Number of Sequences: 78 Number of extensions: 2984 Number of successful extensions: 146 Number of sequences better than 1.0e-05: 31 Number of HSP's better than 0.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 15 Number of HSP's that attempted gapping in prelim test: 57 Number of HSP's gapped (non-prelim): 38 length of query: 834 length of database: 48,235 effective HSP length: 70 effective length of query: 764 effective length of database: 42,775 effective search space: 32680100 effective search space used: 32680100 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 96 (41.6 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-001133 sll1673 (452 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-001133 sll1673 775 0.0 SYNE-PCC-01-002618 slr1760 172 1e-45 SYNE-PCC-01-000542 sll0821 152 3e-39 SYNE-PCC-01-001306 sll1905 97 1e-22 SYNE-PCC-01-001461 slr0115 88 6e-20 SYNE-PCC-01-002033 slr0947 87 1e-19 SYNE-PCC-01-002731 slr1909 78 6e-17 SYNE-PCC-01-002086 slr1042 76 2e-16 SYNE-PCC-01-000414 sll0649 71 8e-15 SYNE-PCC-01-001437 slr0081 68 7e-14 SYNE-PCC-01-002672 slr1837 62 3e-12 SYNE-PCC-01-002489 slr1588 62 4e-12 SYNE-PCC-01-002635 slr1783 62 5e-12 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 62 5e-12 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 61 8e-12 SYNE-PCC-01-000242 sll0396 59 4e-11 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 58 5e-11 SYNE-PCC-01-002788 slr1982 58 7e-11 SYNE-PCC-01-002879 slr2104 57 1e-10 SYNE-PCC-01-000800 sll1228 55 3e-10 SYNE-PCC-01-002486 slr1584 55 4e-10 SYNE-PCC-01-000523 sll0797 54 8e-10 SYNE-PCC-01-002221 slr1213 51 6e-09 SYNE-PCC-01-000877 sll1330 51 6e-09 SYNE-PCC-01-002617 slr1759 50 1e-08 SYNE-PCC-01-002873 slr2098 50 2e-08 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 49 2e-08 SYNE-PCC-01-001132 sll1672 46 3e-07 SYNE-PCC-01-000518 sll0789 46 3e-07 SYNE-PCC-01-000608 sll0921 45 6e-07 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 775 bits (2001), Expect = 0.0 Identities = 403/452 (89%), Positives = 403/452 (89%) Query: 1 MENTDEKKGNILLVXXXXXXXXXXXXXXXXXGYTVRSVTSGKMALRTLQVKRPDLILLDI 60 MENTDEKKGNILLV GYTVRSVTSGKMALRTLQVKRPDLILLDI Sbjct: 1 MENTDEKKGNILLVDDLPNNLQLLSDLLINLGYTVRSVTSGKMALRTLQVKRPDLILLDI 60 Query: 61 KMPDMDGYQVCEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQIEEVVA 120 KMPDMDGYQVCEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQIEEVVA Sbjct: 61 KMPDMDGYQVCEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQIEEVVA 120 Query: 121 RIEGQFTIQRQRIXXXXXXXXXXXXXXXXYQSRALLSSVLNSALDGIAAMQAVRNPQTGD 180 RIEGQFTIQRQRI YQSRALLSSVLNSALDGIAAMQAVRNPQTGD Sbjct: 121 RIEGQFTIQRQRIALKREVRKRREAEEVLYQSRALLSSVLNSALDGIAAMQAVRNPQTGD 180 Query: 181 IEDFRCLVINPILSKAFNRSREDLIGRVLLKRFLQRLDPQLFDQFVNLVETGTFLTQDIY 240 IEDFRCLVINPILSKAFNRSREDLIGRVLLKRFLQRLDPQLFDQFVNLVETGTFLTQDIY Sbjct: 181 IEDFRCLVINPILSKAFNRSREDLIGRVLLKRFLQRLDPQLFDQFVNLVETGTFLTQDIY 240 Query: 241 FPIANSDWYHFVAVKLGDGFAVTVRDITDRKRMXXXXXXXXXXXXXXXXIDGLTHIANRR 300 FPIANSDWYHFVAVKLGDGFAVTVRDITDRKRM IDGLTHIANRR Sbjct: 241 FPIANSDWYHFVAVKLGDGFAVTVRDITDRKRMELELQAANQQLQLLANIDGLTHIANRR 300 Query: 301 RFDEYLAQEWQRHCREQKPLSLILVDIDYFKAYNDLYGHQKGDDCLQKVANTLVDIAKRI 360 RFDEYLAQEWQRHCREQKPLSLILVDIDYFKAYNDLYGHQKGDDCLQKVANTLVDIAKRI Sbjct: 301 RFDEYLAQEWQRHCREQKPLSLILVDIDYFKAYNDLYGHQKGDDCLQKVANTLVDIAKRI 360 Query: 361 TDLVARYGGEEFVIVLPNTNRQDALAMAENMLQAIAALAIPHEGSSVSKYVTISIGVSSI 420 TDLVARYGGEEFVIVLPNTNRQDALAMAENMLQAIAALAIPHEGSSVSKYVTISIGVSSI Sbjct: 361 TDLVARYGGEEFVIVLPNTNRQDALAMAENMLQAIAALAIPHEGSSVSKYVTISIGVSSI 420 Query: 421 IPMPEDTIERIISEADQALYSAKSQGRNRAIA 452 IPMPEDTIERIISEADQALYSAKSQGRNRAIA Sbjct: 421 IPMPEDTIERIISEADQALYSAKSQGRNRAIA 452 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 172 bits (437), Expect = 1e-45 Identities = 85/163 (52%), Positives = 112/163 (68%) Query: 290 IDGLTHIANRRRFDEYLAQEWQRHCREQKPLSLILVDIDYFKAYNDLYGHQKGDDCLQKV 349 +D LT +ANRR+ + +L EW REQ P S++L DIDYFK YND YGHQ GDDCLQ+V Sbjct: 151 VDQLTQLANRRQLELFLDTEWSEAIREQYPFSILLCDIDYFKNYNDHYGHQGGDDCLQQV 210 Query: 350 ANTLVDIAKRITDLVARYGGEEFVIVLPNTNRQDALAMAENMLQAIAALAIPHEGSSVSK 409 A L + R DL ARYGGEEF+IVLPNT+ Q A+ + E++ I LAIPH S+++ Sbjct: 211 AKALTRVVHRPKDLAARYGGEEFLIVLPNTDLQGAIHIGEDIQAEITRLAIPHVQSAIAD 270 Query: 410 YVTISIGVSSIIPMPEDTIERIISEADQALYSAKSQGRNRAIA 452 +VT+SIG +S IP +++ ADQ LY AK+QGRNR ++ Sbjct: 271 HVTLSIGCASTIPRLGSDWGKLVGAADQYLYEAKAQGRNRLVS 313 Score = 62.4 bits (150), Expect = 3e-12 Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 3/103 (2%) Query: 32 GYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQVCEMIKKEEELQDIPIIFISAL 91 G+ V T+G+ AL +P+++LLD MP MDG+ C+ + K + ++ I+ L Sbjct: 35 GHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGFACCQALMKIYQNPSPLVLMITGL 94 Query: 92 GDTFDKVKAFECGGVDYITKPFQ---IEEVVARIEGQFTIQRQ 131 D +AFE G +DY+TKP + + V R+ Q +Q Q Sbjct: 95 DDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLLYQNRLQHQ 137 >SYNE-PCC-01-000542 sll0821 Length = 1276 Score = 152 bits (383), Expect = 3e-39 Identities = 76/163 (46%), Positives = 108/163 (66%), Gaps = 1/163 (0%) Query: 290 IDGLTHIANRRRFDEYLAQEWQRHCREQKPLSLILVDIDYFKAYNDLYGHQKGDDCLQKV 349 +D LT + NR FD L +EWQR R ++PL+L+L D+D+FK +ND YGH GD CL+K+ Sbjct: 1102 LDALTQVGNRYLFDSTLEREWQRLQRIREPLALLLCDVDFFKGFNDNYGHPAGDRCLKKI 1161 Query: 350 ANTLVDIAKRITDLVARYGGEEFVIVLPNTNRQDALAMAENMLQAIAALAIPHEGSSVSK 409 A+ + +AKR TDLVARYGGEEF I+L T+ + A+ + E + +A LAIPH S Sbjct: 1162 ADAMAKVAKRPTDLVARYGGEEFAIILSETSLEGAINVTEALQVEVANLAIPHTVSGTG- 1220 Query: 410 YVTISIGVSSIIPMPEDTIERIISEADQALYSAKSQGRNRAIA 452 +VT+SIG++ P ++ AD ALY AK++GRN+ +A Sbjct: 1221 HVTLSIGIAVYTPERHINPNALVKAADLALYEAKAKGRNQWLA 1263 Score = 63.5 bits (153), Expect = 1e-12 Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 8/162 (4%) Query: 291 DGLTHIANRRRFDEYLAQEWQRHCREQKPLSLILVDIDYFKAYNDLYGHQKGDDCLQKVA 350 D LT + N F+ L E K + ++++ +D FK N+ +GH+ GD LQ+VA Sbjct: 434 DPLTQLPNWIIFNRQLTLALLDALYEGKMVGVLVIAMDRFKRINESFGHKTGDGLLQEVA 493 Query: 351 NTL---VDIAKRITDLVARYGGEEFVIVLPN-TNRQDALAMAENMLQAIAALAIPHEGSS 406 + L + + L++R+ G+ F I+L ++ Q+ + + E +L P Sbjct: 494 DRLNQKLSPLAAYSPLLSRWHGDGFTILLTQISDNQEMIPLCERLLSTFQE---PFFLQG 550 Query: 407 VSKYVTISIGVSSIIPMPEDTIERIISEADQALYSAKSQGRN 448 Y+T S+G+S+ P +T E ++ A+ AL AK QG+N Sbjct: 551 QPIYLTASMGIST-APYDGETAESLLKFAEIALTRAKCQGKN 591 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 97.1 bits (240), Expect = 1e-22 Identities = 78/267 (29%), Positives = 124/267 (46%), Gaps = 50/267 (18%) Query: 32 GYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQVCEMIKKEEELQDIPIIFISAL 91 GY+ VTSG AL+ + +PDLILLD+ MP MDG +VC+ +K++ + +DIP+IF++A Sbjct: 41 GYSTTFVTSGPEALQRVTQAQPDLILLDLMMPGMDGLEVCDRLKQDPQTRDIPVIFLTAS 100 Query: 92 GDTFDKVKAFECGGVDYITKPFQIEEVVARIEGQFTIQRQRIXXXXXXXXXXXXXXXXYQ 151 + D ++AF G VDY+TKPF E++AR++ +++ R Q Sbjct: 101 NEKQDLLQAFAKGAVDYVTKPFSPPELLARVKTHLELKQTR---------DNLHHTLLEQ 151 Query: 152 SRALLSSVLNSALDGIAAMQAVRNPQTGDI---EDFRCLVINPILSKAFNRS-REDLI-- 205 +R + S GI V+N Q G + +V+NP ++ FN DL+ Sbjct: 152 ARTAEALACTSTRLGI----LVQNMQAGVLMTDAQGTIVVVNPEFARLFNLGFPADLLLG 207 Query: 206 ----------------GRVLLKRFLQRLDPQLFDQFVNLVETGTFLTQDIYFPIANSDWY 249 G+ + FL P+ + +E G F +D Sbjct: 208 KNLTAIAPRINGLISHGQGVTHNFLAIESPEPLLKVELALEDGRFFERD----------- 256 Query: 250 HFVAVKLGD---GFAVTVRDITDRKRM 273 +V + LGD G RDI+ RK++ Sbjct: 257 -YVPIMLGDSSQGHFWLYRDISQRKQV 282 Score = 54.3 bits (129), Expect = 8e-10 Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 1/86 (1%) Query: 32 GYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQVCEMIKKEEELQDIP-IIFISA 90 GY V V +G+ AL L D++L+D++MP+MDG E I++ + + P II ++A Sbjct: 763 GYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTATEHIRRSQGRSERPWIIAVTA 822 Query: 91 LGDTFDKVKAFECGGVDYITKPFQIE 116 D+ + G DY++KP ++E Sbjct: 823 YSMEGDRERCLASGMNDYVSKPIRLE 848 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 87.8 bits (216), Expect = 6e-20 Identities = 36/91 (39%), Positives = 60/91 (65%) Query: 32 GYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQVCEMIKKEEELQDIPIIFISAL 91 GY V+ G +PDLI+LD+ +P +DG+ VC+ ++++E DIP++ ++AL Sbjct: 25 GYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFTVCQRLRRDERTADIPVLMLTAL 84 Query: 92 GDTFDKVKAFECGGVDYITKPFQIEEVVARI 122 G DK++ F+ G DY+TKPF +EE++AR+ Sbjct: 85 GQIQDKIQGFDSGADDYLTKPFDVEEMLARV 115 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 86.7 bits (213), Expect = 1e-19 Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 3/91 (3%) Query: 32 GYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQVCEMIKKEEELQDIPIIFISAL 91 GY V + G+ A+ T PDL++LD+ MP +DGY VC+ ++KE DIPII ++AL Sbjct: 20 GYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQELRKE---SDIPIIMLTAL 76 Query: 92 GDTFDKVKAFECGGVDYITKPFQIEEVVARI 122 GD D++ E G DY+ KPF +E+ ARI Sbjct: 77 GDVADRITGLELGADDYVVKPFSPKELEARI 107 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 77.8 bits (190), Expect = 6e-17 Identities = 35/92 (38%), Positives = 58/92 (63%) Query: 32 GYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQVCEMIKKEEELQDIPIIFISAL 91 GY V + +G+ AL L PD+I+ DI MP+MDGY E +++ ++ IP++F+SA Sbjct: 31 GYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIPVMFLSAK 90 Query: 92 GDTFDKVKAFECGGVDYITKPFQIEEVVARIE 123 G + ++VK G Y+ KPF+ EE+ A+++ Sbjct: 91 GQSHNRVKGLNVGADIYMAKPFEPEELAAQVQ 122 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 75.9 bits (185), Expect = 2e-16 Identities = 41/113 (36%), Positives = 58/113 (51%) Query: 11 ILLVXXXXXXXXXXXXXXXXXGYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQV 70 +LLV G+ V G AL LQ PDL++LDI MP M+GY+V Sbjct: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 Query: 71 CEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQIEEVVARIE 123 C IK + + +++P+I S+ G+ FD+ G YI KPFQ E+V I+ Sbjct: 90 CRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIK 142 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 70.9 bits (172), Expect = 8e-15 Identities = 36/113 (31%), Positives = 58/113 (51%) Query: 10 NILLVXXXXXXXXXXXXXXXXXGYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQ 69 NIL+V +T G+ LR Q + PDLI+LD+ +P +DG + Sbjct: 13 NILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLE 72 Query: 70 VCEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQIEEVVARI 122 VC I+++ +D I+ ++A G+ D++ G DY+ KPF E+VAR+ Sbjct: 73 VCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARV 125 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 67.8 bits (164), Expect = 7e-14 Identities = 42/107 (39%), Positives = 59/107 (55%), Gaps = 11/107 (10%) Query: 32 GYTVRSVTSGKMALRTLQV-------KRPDLILLDIKMPDMDGYQVCEMIKKEEELQDIP 84 GY V +V G+ AL LQ DLI+LDI +P ++G VC ++ + + P Sbjct: 54 GYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIMLPQVNGLDVCRSLRFGGD--NTP 111 Query: 85 IIFISALGDTFDKVKAFECGGVDYITKPFQIEEVVARIEGQFTIQRQ 131 I+ +SA G +KV E G DYITKPF ++E+VAR I+RQ Sbjct: 112 ILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARCRAM--IRRQ 156 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 62.4 bits (150), Expect = 3e-12 Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 2/113 (1%) Query: 10 NILLVXXXXXXXXXXXXXXXXXGYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQ 69 NILLV G+T+ GK L + DL++LD +P + G + Sbjct: 3 NILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGLE 62 Query: 70 VCEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQIEEVVARI 122 +C I+ P++F++A D+V + GG DY+ KPF++ E++AR+ Sbjct: 63 ICRQIRILGH--STPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFELRELLARV 113 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 62.0 bits (149), Expect = 4e-12 Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 2/99 (2%) Query: 33 YTVRSVTSGKMALRTLQVKR--PDLILLDIKMPDMDGYQVCEMIKKEEELQDIPIIFISA 90 Y + +G +AL L PDLI+ D+ MP+MDG+ + ++K + IP IF++A Sbjct: 26 YKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGHGLITALQKNAKTAAIPFIFLTA 85 Query: 91 LGDTFDKVKAFECGGVDYITKPFQIEEVVARIEGQFTIQ 129 LG D K G DY+ KPF+ E+++ + + Q Sbjct: 86 LGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSRLQKQ 124 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 61.6 bits (148), Expect = 5e-12 Identities = 26/83 (31%), Positives = 51/83 (61%) Query: 48 LQVKRPDLILLDIKMPDMDGYQVCEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVD 107 LQ P L++ DI MP +DGYQ + ++++ Q +P++F++A G T D+++ ++ G Sbjct: 96 LQHHLPALVISDIMMPQVDGYQFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDA 155 Query: 108 YITKPFQIEEVVARIEGQFTIQR 130 +++KPF +E+ A + Q+ Sbjct: 156 FLSKPFDPDELEAIVRNLLARQQ 178 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 61.6 bits (148), Expect = 5e-12 Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 2/92 (2%) Query: 32 GYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQVCEMIKKEEELQDIPIIFISAL 91 G+ V T GK + L D ++LD+ +P +DG +V + + QD+P++ ++A Sbjct: 24 GFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLEVLQQWRSNH--QDVPVLILTAR 81 Query: 92 GDTFDKVKAFECGGVDYITKPFQIEEVVARIE 123 ++VK + G DY+ KPF + EV AR++ Sbjct: 82 DTLDERVKGLQSGADDYLCKPFALAEVAARLQ 113 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 60.8 bits (146), Expect = 8e-12 Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 1/91 (1%) Query: 33 YTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQVCEMIKKEEELQDIPIIFISALG 92 Y V + K A+ ++ + P LILLD +P G Q + IKK+E IPII ++A Sbjct: 27 YDVIEASDFKTAINKIK-ENPKLILLDWMLPGRSGIQFIQYIKKQESYAAIPIIMLTAKS 85 Query: 93 DTFDKVKAFECGGVDYITKPFQIEEVVARIE 123 D + G DYITKPF + ++ARIE Sbjct: 86 TEEDCIACLNAGADDYITKPFSPQILLARIE 116 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 58.5 bits (140), Expect = 4e-11 Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 2/94 (2%) Query: 32 GYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQVCEMIKKEEELQDIPIIFISAL 91 GY V G Q PDLI+++ +P M G ++C ++ E IPII I+A Sbjct: 26 GYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLELCRRLR--EMGSRIPIILITAK 83 Query: 92 GDTFDKVKAFECGGVDYITKPFQIEEVVARIEGQ 125 D ++V + G DYI KPF +E ARI Q Sbjct: 84 DDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQ 117 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 58.2 bits (139), Expect = 5e-11 Identities = 30/92 (32%), Positives = 55/92 (59%), Gaps = 4/92 (4%) Query: 32 GYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQVCEMIKKEEELQDIPIIFISAL 91 G+ V + +G AL+ L + L+LLD+ MP ++G + + I+K + ++P++ ++A Sbjct: 25 GFDVETANNGLEALQKLN-ESYKLVLLDVMMPKLNGIETLKEIRK---VSNVPVMMLTAR 80 Query: 92 GDTFDKVKAFECGGVDYITKPFQIEEVVARIE 123 G+ D+V E G D + KPF E++ARI+ Sbjct: 81 GEDIDRVLGLELGADDCLPKPFNDRELIARIK 112 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 57.8 bits (138), Expect = 7e-11 Identities = 34/118 (28%), Positives = 55/118 (46%) Query: 6 EKKGNILLVXXXXXXXXXXXXXXXXXGYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDM 65 E +LLV GY V G+ A+ + P LIL+D+ +P + Sbjct: 2 ESMAKVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPII 61 Query: 66 DGYQVCEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQIEEVVARIE 123 DG+ + IK + IPII ++A D+ +A G DY TKP +I+ ++ ++E Sbjct: 62 DGWTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKME 119 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 57.0 bits (136), Expect = 1e-10 Identities = 34/111 (30%), Positives = 56/111 (50%) Query: 4 TDEKKGNILLVXXXXXXXXXXXXXXXXXGYTVRSVTSGKMALRTLQVKRPDLILLDIKMP 63 T + +ILLV G V+ +G+ AL L D IL+DI+MP Sbjct: 713 TQLEGASILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMP 772 Query: 64 DMDGYQVCEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQ 114 ++GY I+++E +++PII ++A D+ KA + G D++TKP + Sbjct: 773 MLNGYDATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIK 823 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 55.5 bits (132), Expect = 3e-10 Identities = 30/116 (25%), Positives = 57/116 (49%) Query: 5 DEKKGNILLVXXXXXXXXXXXXXXXXXGYTVRSVTSGKMALRTLQVKRPDLILLDIKMPD 64 D+ +L+V G+ V+ +G+MA+ + P +IL+D++MP Sbjct: 414 DQYNQKVLVVDDRPESRLLLRQLLTSLGFVVQEAENGEMAIALWESWHPQVILMDMQMPV 473 Query: 65 MDGYQVCEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQIEEVVA 120 +DG + IK + Q II ++A ++ + G D+++KPF+ EE++A Sbjct: 474 LDGRSTTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIA 529 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 55.1 bits (131), Expect = 4e-10 Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%) Query: 33 YTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQVCEMIKKEEELQDIPIIFISALG 92 YTV T +A DL++LD+ +P++DG +C+ + L +PI+ ++A Sbjct: 25 YTVDIATDASLAWDYASRLEYDLVILDVMLPELDGITLCQKWRSHSYL--MPILMMTARD 82 Query: 93 DTFDKVKAFECGGVDYITKPFQIEEVVARI 122 DK+ + G DY+ KP + E+ AR+ Sbjct: 83 TINDKITGLDAGADDYVVKPVDLGELFARV 112 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 54.3 bits (129), Expect = 8e-10 Identities = 27/92 (29%), Positives = 55/92 (59%), Gaps = 4/92 (4%) Query: 33 YTVRSVTSGKMALRTLQVKRPD--LILLDIKMPDMDGYQVCEMIKKEEELQDIPIIFISA 90 Y V VT G A L+ + + L ++D +P + G ++C+ ++ + +P++ ++A Sbjct: 25 YVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSGLELCQKLRTQGN--SLPVLMLTA 82 Query: 91 LGDTFDKVKAFECGGVDYITKPFQIEEVVARI 122 LG+ ++V+ + G DY+TKPF + E++AR+ Sbjct: 83 LGEPENRVEGLDAGADDYLTKPFVMAELLARL 114 >SYNE-PCC-01-002221 slr1213 Length = 241 Score = 51.2 bits (121), Expect = 6e-09 Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 5/93 (5%) Query: 32 GYTVRSVTS-GKMALRTLQVKRPDLILLDIKMP-DMDGYQVCEMIKKEEELQDIPIIFIS 89 GY + + S G AL+ + PDL+LLDI++ ++DG +V E IK L IPI++++ Sbjct: 26 GYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEIDGIEVAERIKS---LYSIPIVYLT 82 Query: 90 ALGDTFDKVKAFECGGVDYITKPFQIEEVVARI 122 A D +A + Y+ KPF+ E++++ + Sbjct: 83 AFSDGETLERAQKTNPQGYVIKPFRREQLLSTV 115 >SYNE-PCC-01-000877 sll1330 Length = 250 Score = 51.2 bits (121), Expect = 6e-09 Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 5/93 (5%) Query: 32 GYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQVCEMIKKEEELQDIPIIFISAL 91 GY V+ + A + + P L ++D + D DG ++C + ++ + +IFI + Sbjct: 27 GYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGDGIELCRWLYQQHQ----SMIFILSA 82 Query: 92 GDTF-DKVKAFECGGVDYITKPFQIEEVVARIE 123 DT D V + G DY+TKPF ++E +ARIE Sbjct: 83 KDTEKDIVHGLKAGADDYLTKPFGMQEFLARIE 115 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 50.1 bits (118), Expect = 1e-08 Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 1/88 (1%) Query: 32 GYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQVCEMIKKEEELQDIP-IIFISA 90 GY V +G+ + L+ K DL+L+D++MP MDG C I++ L+ P I+ ++A Sbjct: 1213 GYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGITACRHIRQTLPLERQPRIVAMTA 1272 Query: 91 LGDTFDKVKAFECGGVDYITKPFQIEEV 118 D+ + + G YI+KP I ++ Sbjct: 1273 NAMPGDRQECLDAGMDGYISKPISINQL 1300 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 49.7 bits (117), Expect = 2e-08 Identities = 29/108 (26%), Positives = 51/108 (47%) Query: 11 ILLVXXXXXXXXXXXXXXXXXGYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQV 70 ILLV G+ V +G +AL L L+L+D++MP+MDG + Sbjct: 927 ILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIEA 986 Query: 71 CEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQIEEV 118 I++ +PI+ ++A D+ + + G D++ KP + EE+ Sbjct: 987 TIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEEL 1034 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 49.3 bits (116), Expect = 2e-08 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%) Query: 32 GYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQVCEMIKKEEELQDIPIIFISAL 91 GY V +G L +L+++DI +P +G + +++E L P+IF++ Sbjct: 27 GYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGLLLARELREELSL---PLIFLTGR 83 Query: 92 GDTFDKVKAFECGGVDYITKPFQIEEVVAR 121 + DK+ E G DY+TKPF E+ R Sbjct: 84 DNEVDKILGLEIGADDYLTKPFNPRELTIR 113 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 45.8 bits (107), Expect = 3e-07 Identities = 22/83 (26%), Positives = 44/83 (53%) Query: 32 GYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQVCEMIKKEEELQDIPIIFISAL 91 G+ + ++G+ A+ + P LI +D++MP MDGY+ + IK + + ++ ++A Sbjct: 653 GFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYEATKYIKGQVKGNATAVVALTAS 712 Query: 92 GDTFDKVKAFECGGVDYITKPFQ 114 +K G D++ KPF+ Sbjct: 713 VLEEEKAIVLSAGCDDFLRKPFR 735 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 45.8 bits (107), Expect = 3e-07 Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 2/68 (2%) Query: 55 LILLDIKMPDMDGYQVCEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQ 114 L + D +P + G ++C+ ++ + +PI+ ++A D+V+ + G DY+ KPF Sbjct: 49 LAIFDWMVPGLSGLELCQKLRGQRS--SLPILMLTAKDQIADRVEGLDAGADDYLIKPFG 106 Query: 115 IEEVVARI 122 + E++AR+ Sbjct: 107 MAELLARL 114 >SYNE-PCC-01-000608 sll0921 Length = 222 Score = 44.7 bits (104), Expect = 6e-07 Identities = 23/89 (25%), Positives = 44/89 (49%) Query: 35 VRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQVCEMIKKEEELQDIPIIFISALGDT 94 V +G++ L +Q RPD++++DI +PDM+G V + +KK ++ ++ Sbjct: 32 VGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNGIDVTQQLKKGPLNCQCRVVILTLNDQE 91 Query: 95 FDKVKAFECGGVDYITKPFQIEEVVARIE 123 + AF G Y K + E ++ I+ Sbjct: 92 ETVLAAFSAGADAYCMKDSRTELLIEAIQ 120 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.322 0.139 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,192 Number of Sequences: 78 Number of extensions: 1468 Number of successful extensions: 63 Number of sequences better than 1.0e-05: 30 Number of HSP's better than 0.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 18 Number of HSP's gapped (non-prelim): 39 length of query: 452 length of database: 48,235 effective HSP length: 66 effective length of query: 386 effective length of database: 43,087 effective search space: 16631582 effective search space used: 16631582 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 94 (40.8 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-001160 sll1708 (226 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-001160 sll1708 436 e-125 SYNE-PCC-01-000608 sll0921 172 8e-46 SYNE-PCC-01-001075 sll1592 150 3e-39 HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator pr... 125 1e-31 SYNE-PCC-01-001575 slr0312 119 6e-30 SYNE-PCC-01-001039 sll1544 77 5e-17 SYNE-PCC-01-002731 slr1909 74 4e-16 SYNE-PCC-01-002486 slr1584 65 1e-13 SYNE-PCC-01-002788 slr1982 63 9e-13 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 55 1e-10 SYNE-PCC-01-000518 sll0789 54 6e-10 SYNE-PCC-01-000414 sll0649 54 6e-10 SYNE-PCC-01-002221 slr1213 53 7e-10 SYNE-PCC-01-000242 sll0396 52 1e-09 SYNE-PCC-01-002951 ssl0564 52 2e-09 SYNE-PCC-01-002617 slr1759 52 2e-09 SYNE-PCC-01-000800 sll1228 52 2e-09 SYNE-PCC-01-002672 slr1837 51 3e-09 SYNE-PCC-01-000511 sll0782 51 4e-09 SYNE-PCC-01-001461 slr0115 50 5e-09 SYNE-PCC-01-002033 slr0947 49 1e-08 SYNE-PCC-01-000523 sll0797 49 1e-08 SYNE-PCC-01-001306 sll1905 48 2e-08 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 47 5e-08 SYNE-PCC-01-001437 slr0081 46 1e-07 SYNE-PCC-01-001132 sll1672 46 1e-07 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 42 2e-06 SYNE-PCC-01-002489 slr1588 42 2e-06 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 41 4e-06 >SYNE-PCC-01-001160 sll1708 Length = 226 Score = 436 bits (1120), Expect = e-125 Identities = 226/226 (100%), Positives = 226/226 (100%) Query: 1 MDFTSPHRVKIEPCLPMKILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAV 60 MDFTSPHRVKIEPCLPMKILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAV Sbjct: 1 MDFTSPHRVKIEPCLPMKILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAV 60 Query: 61 LNPDLIVMDIGLPGLDGIEATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKG 120 LNPDLIVMDIGLPGLDGIEATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKG Sbjct: 61 LNPDLIVMDIGLPGLDGIEATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKG 120 Query: 121 ATLERLILAIAAAQDGATYLDPQIARVVVENLKPPVPEGQADVSSLSEREIDVLKLIVEG 180 ATLERLILAIAAAQDGATYLDPQIARVVVENLKPPVPEGQADVSSLSEREIDVLKLIVEG Sbjct: 121 ATLERLILAIAAAQDGATYLDPQIARVVVENLKPPVPEGQADVSSLSEREIDVLKLIVEG 180 Query: 181 KSNQEIAQTLYLSTNTIKTHVRGIMNKLSVDDRVQAAVIALRSGLV 226 KSNQEIAQTLYLSTNTIKTHVRGIMNKLSVDDRVQAAVIALRSGLV Sbjct: 181 KSNQEIAQTLYLSTNTIKTHVRGIMNKLSVDDRVQAAVIALRSGLV 226 >SYNE-PCC-01-000608 sll0921 Length = 222 Score = 172 bits (436), Expect = 8e-46 Identities = 93/218 (42%), Positives = 141/218 (64%), Gaps = 8/218 (3%) Query: 17 MKILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPGLD 76 ++I ++ED+ L++ GL+ AL FE +G NG + PD++++DIGLP ++ Sbjct: 4 IRIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMN 63 Query: 77 GIEATKQIKQ--TSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIAAAQ 134 GI+ T+Q+K+ + Q +V+LT + ++AA S+GADAYC+K + E LI AI A Sbjct: 64 GIDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQATH 123 Query: 135 DGATYLDPQIARVVV------ENLKPPVPEGQADVSSLSEREIDVLKLIVEGKSNQEIAQ 188 G ++DP IAR+V+ E +P P + L+ERE++VL+LIV+G SN +IA+ Sbjct: 124 GGFAWIDPAIARIVLAHAPGAEPSEPSSPSRTSLSYGLTERELEVLQLIVDGCSNADIAE 183 Query: 189 TLYLSTNTIKTHVRGIMNKLSVDDRVQAAVIALRSGLV 226 LY++ T+KTHVR I+NKL +DR QAAV A+RSGLV Sbjct: 184 KLYITVGTVKTHVRNILNKLCANDRTQAAVRAIRSGLV 221 >SYNE-PCC-01-001075 sll1592 Length = 226 Score = 150 bits (379), Expect = 3e-39 Identities = 84/217 (38%), Positives = 128/217 (58%), Gaps = 7/217 (3%) Query: 17 MKILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPGLD 76 ++IL+VEDD L +LGL L ++ G ++G A+ D++++D+GLPG+ Sbjct: 8 IRILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPGIG 67 Query: 77 GIEATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIAAAQDG 136 GIEA QIK+ PQ+ +++LTSH+ P I + + A YCVKG E L+LAI + G Sbjct: 68 GIEACHQIKKIHPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLAIRSVAAG 127 Query: 137 ATYLDP------QIARVVVENLKPPVPEGQAD-VSSLSEREIDVLKLIVEGKSNQEIAQT 189 A + D Q A + +P AD + L++RE+++L L+ +GKSNQEIA Sbjct: 128 AFWWDAIASQEIQTAFQHSSSTGAVLPLADADGENPLTKRELEILSLVAKGKSNQEIADE 187 Query: 190 LYLSTNTIKTHVRGIMNKLSVDDRVQAAVIALRSGLV 226 LY++ T++ HV I+ KL V DR QAA++A+ LV Sbjct: 188 LYIAPGTVRVHVHTILRKLEVRDRTQAALLAIERRLV 224 >HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator protein (narP) Length = 208 Score = 125 bits (314), Expect = 1e-31 Identities = 63/203 (31%), Positives = 113/203 (55%), Gaps = 5/203 (2%) Query: 17 MKILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPGLD 76 +K+L+++D PLM+ G++Q + + FE++ V +G + A +PD+I++D+ + GL Sbjct: 5 LKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLS 64 Query: 77 GIEATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIAAAQDG 136 G++ K ++ I++LT N+I + +GAD Y +K + L+ I G Sbjct: 65 GLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRIAQG 124 Query: 137 ATYLDPQIARVVVENLKPPVPEGQADVSSLSEREIDVLKLIVEGKSNQEIAQTLYLSTNT 196 L I +++E P + SL++RE+ VL+ I G SN++IA L++S T Sbjct: 125 EVILSDSIKNLLLERTHEDNP-----LDSLTDREMGVLRQIATGLSNKQIAAQLFISEET 179 Query: 197 IKTHVRGIMNKLSVDDRVQAAVI 219 +K H+R ++ KL+V RV A V+ Sbjct: 180 VKVHIRNLLRKLNVHSRVAATVL 202 >SYNE-PCC-01-001575 slr0312 Length = 209 Score = 119 bits (299), Expect = 6e-30 Identities = 65/210 (30%), Positives = 110/210 (52%), Gaps = 9/210 (4%) Query: 17 MKILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPGLD 76 +++LI +D + + GL + ++I + +NG A+ PD+ +MD+ +P ++ Sbjct: 7 IRVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPEVE 66 Query: 77 GIEATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIAAAQDG 136 G+ A I I+VLT++ +I L +GA Y +K + L+ AI G Sbjct: 67 GVAAISAICAIVKFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHRG 126 Query: 137 ATYLDPQIARVVVENLKPPVPEGQADVSSLSEREIDVLKLIVEGKSNQEIAQTLYLSTNT 196 Y+ P + +V+ L P LSERE++VL + +G SN +IA L + T Sbjct: 127 QKYIPPDVGAKLVQRLSNP---------ELSERELEVLGSLAQGMSNADIATALSIGEGT 177 Query: 197 IKTHVRGIMNKLSVDDRVQAAVIALRSGLV 226 +K+HV I+NKL V DR QA ++A++ G+V Sbjct: 178 VKSHVNRILNKLDVGDRTQAVIVAVKRGIV 207 >SYNE-PCC-01-001039 sll1544 Length = 228 Score = 77.0 bits (188), Expect = 5e-17 Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 13/165 (7%) Query: 63 PDLIVMDIGLPGLDGIEATKQIKQ--TSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKG 120 P ++V+ L G++ KQ+K SPQ +++L H E A GADA ++ Sbjct: 71 PLVVVICQRLEDGSGLDLLKQLKAHARSPQCLLLLLNDHAAIVE--EAQQYGADAIFLES 128 Query: 121 ATLERLI-LAIAAAQDGATYLDPQIARVVVENLKPPVPEGQADVSSLSEREIDVLKLIVE 179 + I LA+ G TY+D ++ + + Q D L++RE+ +L+L+ E Sbjct: 129 SLGNGEINLAVECLLQGRTYIDSRLEAIA------DYRKSQKD--ELTQREVAILRLVAE 180 Query: 180 GKSNQEIAQTLYLSTNTIKTHVRGIMNKLSVDDRVQAAVIALRSG 224 GK+N EI Q L+L+++T++ +V+ IM KL+ DR AA+ LR G Sbjct: 181 GKTNSEIGQELHLASSTVREYVQTIMRKLNARDRTSAAIAGLREG 225 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 73.9 bits (180), Expect = 4e-16 Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 14/212 (6%) Query: 19 ILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPGLDGI 78 +L+V+DDP + L ++ L ++ +++ NG A+ PD+IV DI +P +DG Sbjct: 10 LLLVDDDPNLLLLVKDYL-EYQGYQVT-TAGNGREALDLLTTTVPDMIVCDIMMPEMDGY 67 Query: 79 EATKQIKQTSP--QIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIAAAQDG 136 +Q++Q I ++ L++ + + L+ GAD Y K E L + + Sbjct: 68 AFIEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLR- 126 Query: 137 ATYLDPQIARVVVENLKPPVPEGQADVS---SLSEREIDVLKLIVEGKSNQEIAQTLYLS 193 Q R++ N P + V+ L+ E V++L+ +G +N+EIA L +S Sbjct: 127 ------QADRLLQHNNHPLEDNARVQVARDVELTPTETKVIQLVAQGLANREIADHLKVS 180 Query: 194 TNTIKTHVRGIMNKLSVDDRVQAAVIALRSGL 225 T+++HV ++NK + +R + A A++ + Sbjct: 181 QRTVESHVSNMLNKTGLHNRTELARWAIQKSI 212 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 65.5 bits (158), Expect = 1e-13 Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 35/214 (16%) Query: 17 MKILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPGLD 76 M+IL+VEDD + L +AL ++ + + A A+ L DL+++D+ LP LD Sbjct: 1 MRILLVEDDLPLAETLAEALS--DQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELD 58 Query: 77 GIEATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIAA---- 132 GI ++ + S + I+++T+ N+ I L +GAD Y VK L L + A Sbjct: 59 GITLCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRR 118 Query: 133 --------AQDGATYLDPQIARVVVENLKPPVPEGQADVSSLSEREIDVLKLIVEGKSNQ 184 + G LDP V +N +V SL+ +E +L+L++ + Sbjct: 119 GCATCQPVLEWGPIRLDPSTYEVSYDN----------EVLSLTRKEYSILELLLR-NGRR 167 Query: 185 EIAQTLYLST----------NTIKTHVRGIMNKL 208 +++++ + + +T+K HVR + KL Sbjct: 168 VLSRSMIIDSIWKLESPPEEDTVKVHVRSLRQKL 201 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 62.8 bits (151), Expect = 9e-13 Identities = 42/117 (35%), Positives = 68/117 (58%), Gaps = 4/117 (3%) Query: 18 KILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPGLDG 77 K+L+VED+ + + L + L + +E++ VD G AV A +P LI+MD+ LP +DG Sbjct: 6 KVLLVEDNEMNRDMLSRRL-IRKGYEVVIAVD-GEQAVTMAISESPQLILMDMSLPIIDG 63 Query: 78 IEATKQIK--QTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIAA 132 ATKQIK I I+ LT+H + ++ A+++G D Y K ++RL+ + A Sbjct: 64 WTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEA 120 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 55.5 bits (132), Expect = 1e-10 Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 21/207 (10%) Query: 17 MKILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPGLD 76 M+IL++EDD L+ GL+ +G + + +G + D +V+D+ LP LD Sbjct: 1 MRILLIEDDNLIGNGLQ--IGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLD 58 Query: 77 GIEATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIAAAQDG 136 G+E +Q + + +++LT+ +E + L SGAD Y K L +AA Sbjct: 59 GLEVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAE----VAARLQA 114 Query: 137 ATYLDPQIARVVVENLKPPVPEGQADV------SSLSEREIDVLKLIVEGK----SNQEI 186 V+E + + Q V SL+ RE +L+L + K S I Sbjct: 115 LIRRRYGYHHSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSRSSI 174 Query: 187 AQTL-----YLSTNTIKTHVRGIMNKL 208 + L +S+ + H+ + KL Sbjct: 175 EEKLSSWDEEISSGALDVHIYNLRQKL 201 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 53.5 bits (127), Expect = 6e-10 Identities = 38/134 (28%), Positives = 72/134 (53%), Gaps = 6/134 (4%) Query: 17 MKILIVEDDPLMQLGLEQALGAHERFEIIGRVDNG---YGAVQQAAVLNPDLIVMDIGLP 73 M++L+VED+P + + LE+AL E + ++ V +G + + Q V N L + D +P Sbjct: 1 MRLLLVEDEPDLGMALEKAL-RRENY-VVDWVQDGNLAWSYLDQGWV-NYTLAIFDWMVP 57 Query: 74 GLDGIEATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIAAA 133 GL G+E ++++ + I++LT+ + + L +GAD Y +K + L+ + + Sbjct: 58 GLSGLELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAELLARLRSL 117 Query: 134 QDGATYLDPQIARV 147 Q + L PQ +V Sbjct: 118 QRRSPELQPQQLQV 131 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 53.5 bits (127), Expect = 6e-10 Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 6/117 (5%) Query: 19 ILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGA-VQQAAVLNPDLIVMDIGLPGLDG 77 ILIVEDD + + + L E+F I D G + Q V PDLIV+D+ LP LDG Sbjct: 14 ILIVEDDQEIAQLIRETL-EREQFTCIVTNDGETGLRIFQEQV--PDLIVLDLMLPKLDG 70 Query: 78 IEATKQIKQT--SPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIAA 132 +E +I+Q S +I++LT+ + I LS+GAD Y VK + L+ + A Sbjct: 71 LEVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRA 127 >SYNE-PCC-01-002221 slr1213 Length = 241 Score = 53.1 bits (126), Expect = 7e-10 Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 3/117 (2%) Query: 18 KILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPG-LD 76 KILIVED+ L+ + Q L + + +EI +G A+++ A PDL+++DI + G +D Sbjct: 4 KILIVEDERLVAQHIAQLLKS-DGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEID 62 Query: 77 GIEATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIAAA 133 GIE ++IK I IV LT+ + + A + Y +K E+L+ +A A Sbjct: 63 GIEVAERIKSLY-SIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTVAIA 118 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 52.4 bits (124), Expect = 1e-09 Identities = 30/102 (29%), Positives = 58/102 (56%), Gaps = 2/102 (1%) Query: 18 KILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPGLDG 77 ++L+VE++ + +E L +E +++ D G QA PDLI+++ LPG+ G Sbjct: 4 RVLVVEEEEKLARFMELEL-KYEGYDVSVARD-GLKGFTQAQEFPPDLIIVNGALPGMSG 61 Query: 78 IEATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVK 119 +E +++++ +I I+++T+ E + L +GAD Y VK Sbjct: 62 LELCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVK 103 >SYNE-PCC-01-002951 ssl0564 Length = 89 Score = 52.0 bits (123), Expect = 2e-09 Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 8/76 (10%) Query: 151 NLKPPVPEGQADVSSLSEREIDVLKLIVEGKSNQEIAQTLYLSTNTIKTHVRGIMNKLSV 210 N +PP +SLS+RE+++L L+ G +NQE+++ L +S T+ HV I+ K + Sbjct: 5 NYQPP--------ASLSDRELEILDLVAIGLTNQEVSERLEISKRTVDNHVSNILTKTNT 56 Query: 211 DDRVQAAVIALRSGLV 226 ++RV+ AL+ G V Sbjct: 57 ENRVELVRWALQWGKV 72 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 51.6 bits (122), Expect = 2e-09 Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 7/126 (5%) Query: 4 TSPHRVKIEPCLPMKILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNP 63 T + ++P L +IL+ ED+ + Q Q L + + +NG + Sbjct: 1179 TEDNATSLQPAL--QILLAEDNLVNQKVAHQML--NNLGYPVAIANNGQEVIDALEKKFY 1234 Query: 64 DLIVMDIGLPGLDGIEATKQIKQTSP---QIHIVVLTSHTLPNEIIAALSSGADAYCVKG 120 DL++MD+ +P +DGI A + I+QT P Q IV +T++ +P + L +G D Y K Sbjct: 1235 DLVLMDMQMPVMDGITACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKP 1294 Query: 121 ATLERL 126 ++ +L Sbjct: 1295 ISINQL 1300 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 51.6 bits (122), Expect = 2e-09 Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 4/116 (3%) Query: 18 KILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPGLDG 77 K+L+V+D P +L L Q L + ++ +NG A+ +P +I+MD+ +P LDG Sbjct: 419 KVLVVDDRPESRLLLRQLLTSLGF--VVQEAENGEMAIALWESWHPQVILMDMQMPVLDG 476 Query: 78 IEATKQIKQTSPQIH--IVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIA 131 T++IK + H I+ LT+ E LS+G D + K E LI +A Sbjct: 477 RSTTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIALLA 532 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 51.2 bits (121), Expect = 3e-09 Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 23/211 (10%) Query: 19 ILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPGLDGI 78 IL+V+D+ + L +ALG + I D G + A DL+++D LP + G+ Sbjct: 4 ILLVDDENALTEPLSKALG--HQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGL 61 Query: 79 EATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIAA----AQ 134 E +QI+ ++ LT+ ++ +A L +G D Y +K L L+ + A Sbjct: 62 EICRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFELRELLARVRALLRRQS 121 Query: 135 DGATYLDPQIA----RVVVENLKPPVPEG----QADVSSLSEREIDVLKLIVEGK----S 182 G T + A + V N+ V Q +LSE+E+ +L L ++ S Sbjct: 122 HGETITETLGAVKNNLLSVNNVSLDVANQVAYCQGQRIALSEKEVALLTLFLQAPGQILS 181 Query: 183 NQEIAQTLY-----LSTNTIKTHVRGIMNKL 208 ++EI L+ S+N + VR + K+ Sbjct: 182 HEEIYSHLWPGESPPSSNVLAALVRLLRRKI 212 >SYNE-PCC-01-000511 sll0782 Length = 369 Score = 50.8 bits (120), Expect = 4e-09 Identities = 23/61 (37%), Positives = 41/61 (67%) Query: 166 LSEREIDVLKLIVEGKSNQEIAQTLYLSTNTIKTHVRGIMNKLSVDDRVQAAVIALRSGL 225 LSERE +++ L+ +G +++IA+ L++S +T+K HV G ++KL+ +R QA A G Sbjct: 309 LSEREKEIVSLLAQGLRDRDIAEELHISESTVKFHVNGTLHKLNAKNRYQAIYQATVQGF 368 Query: 226 V 226 + Sbjct: 369 I 369 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 50.4 bits (119), Expect = 5e-09 Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 12/121 (9%) Query: 18 KILIVEDDP----LMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLP 73 +ILI++DDP L+ + LE A +++ VD G A L PDLI++D+ LP Sbjct: 3 RILIIDDDPAISDLVSINLEMA-----GYDVQQAVD-GIKGQALAVQLQPDLIMLDLMLP 56 Query: 74 GLDGIEATKQIK--QTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIA 131 +DG ++++ + + I +++LT+ + I SGAD Y K +E ++ + Sbjct: 57 KVDGFTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVR 116 Query: 132 A 132 A Sbjct: 117 A 117 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 49.3 bits (116), Expect = 1e-08 Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 24/222 (10%) Query: 21 IVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPGLDGIEA 80 +V+D+ ++ LE L +E++ D G A+ +PDL+V+D+ +P LDG Sbjct: 1 MVDDEASIRRILETRLSMIG-YEVVTAAD-GEEAIATFHESDPDLVVLDVMMPKLDGYGV 58 Query: 81 TKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIAAA-----QD 135 +++++ S I I++LT+ + I L GAD Y VK + + L I + ++ Sbjct: 59 CQELRKES-DIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKN 117 Query: 136 GATYLDP----QIARVVVENLKPPVPEGQADVSSLSEREIDVLKLIV----EGKSNQEIA 187 G + QIA + ++ K V +G + L+ E +L+L+V E S EI Sbjct: 118 GMPGIPSSGVLQIATIRIDTNKRQVYKGDERI-RLTGMEFSLLELLVSRSGEPFSRSEIL 176 Query: 188 QTL-------YLSTNTIKTHVRGIMNKLSVDDRVQAAVIALR 222 Q + ++ T + H+ + KL D ++ R Sbjct: 177 QEVWGYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTAR 218 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 49.3 bits (116), Expect = 1e-08 Identities = 36/140 (25%), Positives = 70/140 (50%), Gaps = 4/140 (2%) Query: 17 MKILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQ--QAAVLNPDLIVMDIGLPG 74 M+IL+VED+ + + +++ L E++ ++ V +G A + L ++D LPG Sbjct: 1 MRILLVEDETDLGMAIKKVL-VSEKY-VVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPG 58 Query: 75 LDGIEATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIAAAQ 134 L G+E ++++ + +++LT+ P + L +GAD Y K + L+ + A Q Sbjct: 59 LSGLELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAELLARLRALQ 118 Query: 135 DGATYLDPQIARVVVENLKP 154 + PQI + +L P Sbjct: 119 RRSPQFQPQILTLGNFSLDP 138 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 48.1 bits (113), Expect = 2e-08 Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 4/75 (5%) Query: 48 VDNGYGAVQQAAVLNPDLIVMDIGLPGLDGIEATKQIKQTSPQ---IHIVVLTSHTLPNE 104 V +G A+Q+ PDLI++D+ +PG+DG+E ++KQ PQ I ++ LT+ + Sbjct: 47 VTSGPEALQRVTQAQPDLILLDLMMPGMDGLEVCDRLKQ-DPQTRDIPVIFLTASNEKQD 105 Query: 105 IIAALSSGADAYCVK 119 ++ A + GA Y K Sbjct: 106 LLQAFAKGAVDYVTK 120 Score = 46.2 bits (108), Expect = 9e-08 Identities = 27/89 (30%), Positives = 52/89 (58%), Gaps = 3/89 (3%) Query: 48 VDNGYGAVQQAAVLNPDLIVMDIGLPGLDGIEATKQIKQT---SPQIHIVVLTSHTLPNE 104 V+NG A+ A + D+++MD+ +P +DG+ AT+ I+++ S + I+ +T++++ + Sbjct: 769 VNNGQEALSALAKGDYDVVLMDVEMPEMDGLTATEHIRRSQGRSERPWIIAVTAYSMEGD 828 Query: 105 IIAALSSGADAYCVKGATLERLILAIAAA 133 L+SG + Y K LE L A+ A Sbjct: 829 RERCLASGMNDYVSKPIRLEALQQALQVA 857 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 47.0 bits (110), Expect = 5e-08 Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 5/117 (4%) Query: 18 KILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPGLDG 77 KILIVED+ ++ + L + + +++I D + NP LI++D LPG G Sbjct: 4 KILIVEDECAIREMIALFL-SQKYYDVIEASD--FKTAINKIKENPKLILLDWMLPGRSG 60 Query: 78 IEATKQIK--QTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIAA 132 I+ + IK ++ I I++LT+ + + IA L++GAD Y K + + L+ I A Sbjct: 61 IQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEA 117 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 45.8 bits (107), Expect = 1e-07 Identities = 57/252 (22%), Positives = 112/252 (44%), Gaps = 50/252 (19%) Query: 6 PHRVKIEPCLPM-KILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQ-------- 56 PH ++ + P +IL+VED+ ++ + +L E +E+ VD+G A+ Sbjct: 19 PHSLQHQEIPPSHRILVVEDEVSIRETIVLSL-QEEGYEVYA-VDDGRDALALLQEFSED 76 Query: 57 --QAAVLNPDLIVMDIGLPGLDGIEATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGAD 114 QAAV DLI++DI LP ++G++ + ++ I+++++ E + L GAD Sbjct: 77 PGQAAV---DLIILDIMLPQVNGLDVCRSLRFGGDNTPILIVSAKGSEMEKVTGLEVGAD 133 Query: 115 AYCVKGATLERLILAIAA--AQDGAT-------------YLDPQIARVVVENLKPPVPEG 159 Y K +L+ L+ A + G L PQ RV++ Sbjct: 134 DYITKPFSLKELVARCRAMIRRQGLAGNNIAPFRKFRDLVLYPQECRVLM---------- 183 Query: 160 QADVSSLSEREIDVLKLIVEGK----SNQEIAQTLY-----LSTNTIKTHVRGIMNKLSV 210 + + SL+ +E +L+L + S +++ + ++ + T+ H+R + KL Sbjct: 184 RGEEVSLAPKEFRLLELFMSYPRRVWSREQLIEHIWGIDFMGDSKTVDVHIRWLREKLEQ 243 Query: 211 DDRVQAAVIALR 222 D ++ +R Sbjct: 244 DPSQPEYLVTVR 255 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 45.8 bits (107), Expect = 1e-07 Identities = 38/111 (34%), Positives = 51/111 (45%), Gaps = 3/111 (2%) Query: 11 IEPCLPMKILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDI 70 + P P+ ++V DD + L L A FEI NG A+ P LI MD+ Sbjct: 623 LTPGQPVYKILVVDDKSVNRQLLIKLLAPFGFEI-EEASNGQEAIALWESWEPHLIFMDM 681 Query: 71 GLPGLDGIEATKQIK--QTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVK 119 +P +DG EATK IK +V LT+ L E LS+G D + K Sbjct: 682 RMPVMDGYEATKYIKGQVKGNATAVVALTASVLEEEKAIVLSAGCDDFLRK 732 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 42.0 bits (97), Expect = 2e-06 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 3/102 (2%) Query: 18 KILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPGLDG 77 KIL+VED+ + + L+ A E +++ +NG A N +L+VMDI LPG +G Sbjct: 5 KILVVEDEIVTRNTLKGIFEA-EGYDVF-EAENGVEMHHILANHNINLVVMDINLPGKNG 62 Query: 78 IEATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVK 119 + +++++ + ++ LT + I L GAD Y K Sbjct: 63 LLLARELRE-ELSLPLIFLTGRDNEVDKILGLEIGADDYLTK 103 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 41.6 bits (96), Expect = 2e-06 Identities = 35/118 (29%), Positives = 64/118 (54%), Gaps = 10/118 (8%) Query: 19 ILIVEDDPLMQLGLEQALGAHERFEIIGRVDNG---YGAVQQAAVLNPDLIVMDIGLPGL 75 IL+VED+ +++ + + L E ++I+ +NG G + V+ PDLI+ D+ +P + Sbjct: 4 ILVVEDEAIIRELIGETLSL-ENYKIL-EAENGAVALGLLNSLEVM-PDLIICDVMMPEM 60 Query: 76 DG---IEATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAI 130 DG I A ++ +T+ I + LT+ + ++SGAD Y +K E L+ A+ Sbjct: 61 DGHGLITALQKNAKTA-AIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAV 117 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 40.8 bits (94), Expect = 4e-06 Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 24/209 (11%) Query: 18 KILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPD--LIVMDIGLPGL 75 K+L+V+DD + L L E F++ +NG A+Q+ LN L+++D+ +P L Sbjct: 3 KLLLVDDD-IELTELLSTLLELEGFDV-ETANNGLEALQK---LNESYKLVLLDVMMPKL 57 Query: 76 DGIEATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIAAAQD 135 +GIE K+I++ S + +++LT+ + + L GAD K LI I A Sbjct: 58 NGIETLKEIRKVS-NVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILR 116 Query: 136 GATYLDPQIARVVV---ENLKPPVPEGQADVS----SLSEREIDVLKLIVEGKSNQEIAQ 188 + I+ V + + + G A + +L++ E +L L+++ K N + Sbjct: 117 RSASPSNNISNVEILSFDGITLHFSHGIATYNEENLNLTDYEFKILCLLLKSKGNVVSRE 176 Query: 189 TLYLST---------NTIKTHVRGIMNKL 208 L L ++ H+ + KL Sbjct: 177 ELSLEVMEKPLTPFDRSLDMHISNLRRKL 205 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.318 0.136 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,993 Number of Sequences: 78 Number of extensions: 834 Number of successful extensions: 61 Number of sequences better than 1.0e-05: 29 Number of HSP's better than 0.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 27 Number of HSP's gapped (non-prelim): 31 length of query: 226 length of database: 48,235 effective HSP length: 60 effective length of query: 166 effective length of database: 43,555 effective search space: 7230130 effective search space used: 7230130 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 91 (39.7 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-001280 sll1871 (674 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-001280 sll1871 1191 0.0 SYNE-PCC-01-002879 slr2104 194 9e-52 SYNE-PCC-01-000891 sll1353 177 9e-47 SYNE-PCC-01-002617 slr1759 176 3e-46 SYNE-PCC-01-001132 sll1672 166 3e-43 SYNE-PCC-01-002873 slr2098 158 6e-41 SYNE-PCC-01-001306 sll1905 157 1e-40 SYNE-PCC-01-000295 sll0474 152 3e-39 SYNE-PCC-01-000800 sll1228 139 4e-35 SYNE-PCC-01-001294 sll1888 138 5e-35 SYNE-PCC-01-001509 slr0210 135 5e-34 SYNE-PCC-01-001517 slr0222 121 8e-30 SYNE-PCC-01-002778 slr1969 115 4e-28 SYNE-PCC-01-000985 sll1475 97 2e-22 SYNE-PCC-01-001690 slr0473 73 2e-15 >SYNE-PCC-01-001280 sll1871 Length = 674 Score = 1191 bits (3082), Expect = 0.0 Identities = 627/674 (93%), Positives = 627/674 (93%) Query: 1 MVSIIKSVRRSLLLKFVLSYFCLSSVVVASIFLVANYRAVKGIESQTFNRLNISNNLKEY 60 MVSIIKSVRRSLLLKFVLSYFCLSSVVVASIFLVANYRAVKGIESQTFNRLNISNNLKEY Sbjct: 1 MVSIIKSVRRSLLLKFVLSYFCLSSVVVASIFLVANYRAVKGIESQTFNRLNISNNLKEY 60 Query: 61 QLEQWMEGQKDTLFLLSDINSIQANTELLKNTSVSDPQYKIIQKRLIEELREIDLFLPHI 120 QLEQWMEGQKDTLFLLSDINSIQANTELLKNTSVSDPQYKIIQKRLIEELREIDLFLPHI Sbjct: 61 QLEQWMEGQKDTLFLLSDINSIQANTELLKNTSVSDPQYKIIQKRLIEELREIDLFLPHI 120 Query: 121 EAINILNTGGIVVASNNLDEIGVYKGIGNQTTYFANINSNFKTVPNFYFSKVYNRPSMTF 180 EAINILNTGGIVVASNNLDEIGVYKGIGNQTTYFANINSNFKTVPNFYFSKVYNRPSMTF Sbjct: 121 EAINILNTGGIVVASNNLDEIGVYKGIGNQTTYFANINSNFKTVPNFYFSKVYNRPSMTF 180 Query: 181 ATNIKHDITRERLGYLSIDINLNAVDDLIRKRTGLGDTGETFLVGEINNQVSFIASDENK 240 ATNIKHDITRERLGYLSIDINLNAVDDLIRKRTGLGDTGETFLVGEINNQVSFIASDENK Sbjct: 181 ATNIKHDITRERLGYLSIDINLNAVDDLIRKRTGLGDTGETFLVGEINNQVSFIASDENK 240 Query: 241 KLTANGSKPNFNSLGINSVMAGNSGQGSYVNYAGTPVLGVYQWIEKYNLALITEISEVEA 300 KLTANGSKPNFNSLGINSVMAGNSGQGSYVNYAGTPVLGVYQWIEKYNLALITEISEVEA Sbjct: 241 KLTANGSKPNFNSLGINSVMAGNSGQGSYVNYAGTPVLGVYQWIEKYNLALITEISEVEA 300 Query: 301 LELARRFTRMLVLVGLVSTALLLIAVYXXXXXXXXXXXXXXXAAIDISSGDREARAPVLG 360 LELARRFTRMLVLVGLVSTALLLIAVY AAIDISSGDREARAPVLG Sbjct: 301 LELARRFTRMLVLVGLVSTALLLIAVYLLSIKITKPILLITKAAIDISSGDREARAPVLG 360 Query: 361 EDELGILAKSFNLMTNELRESNSSLEKKNQELELAQKQLAVANSCLEEKVQQRTEELENT 420 EDELGILAKSFNLMTNELRESNSSLEKKNQELELAQKQLAVANSCLEEKVQQRTEELENT Sbjct: 361 EDELGILAKSFNLMTNELRESNSSLEKKNQELELAQKQLAVANSCLEEKVQQRTEELENT 420 Query: 421 VKXXXXXXXXXXXXNATKSIFLANMSHELRTPLNAIIGYSEMLIEEAEDLDSEELVPDLD 480 VK NATKSIFLANMSHELRTPLNAIIGYSEMLIEEAEDLDSEELVPDLD Sbjct: 421 VKALELASSEAEAANATKSIFLANMSHELRTPLNAIIGYSEMLIEEAEDLDSEELVPDLD 480 Query: 481 KILRSGKSLLALINDLLDISKIEAGKMELYLETFNLKELIAGILDTISPXXXXXXXXXXX 540 KILRSGKSLLALINDLLDISKIEAGKMELYLETFNLKELIAGILDTISP Sbjct: 481 KILRSGKSLLALINDLLDISKIEAGKMELYLETFNLKELIAGILDTISPLLKNNNNKLEV 540 Query: 541 XXXXXXXXXYGDLIKLRQGILNLLSNASKFTKDGIISFIVEEFKVDEKDWLSFQVKDTGI 600 YGDLIKLRQGILNLLSNASKFTKDGIISFIVEEFKVDEKDWLSFQVKDTGI Sbjct: 541 EISLESEEVYGDLIKLRQGILNLLSNASKFTKDGIISFIVEEFKVDEKDWLSFQVKDTGI 600 Query: 601 GLTEEQMSKLFQPFTQADSSTTRKYGGTGLGLAITRKFCQMMGGDIYLTSEIGVGSSFTI 660 GLTEEQMSKLFQPFTQADSSTTRKYGGTGLGLAITRKFCQMMGGDIYLTSEIGVGSSFTI Sbjct: 601 GLTEEQMSKLFQPFTQADSSTTRKYGGTGLGLAITRKFCQMMGGDIYLTSEIGVGSSFTI 660 Query: 661 KLPKYAQLNSAKND 674 KLPKYAQLNSAKND Sbjct: 661 KLPKYAQLNSAKND 674 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 194 bits (492), Expect = 9e-52 Identities = 114/270 (42%), Positives = 167/270 (61%), Gaps = 5/270 (1%) Query: 391 ELELAQKQLAVANSCLEEKVQQRTEELENTVKXXXXXXXXXXXXNATKSIFLANMSHELR 450 EL+ AQ L N LE+++Q+RT+ELEN+ + KS FLANMSHE+R Sbjct: 411 ELQEAQISLEHLNEKLEQRIQERTQELENSQESLLEAKLVAEGATKAKSEFLANMSHEIR 470 Query: 451 TPLNAIIGYSEMLIEEAEDLDSEELVPDLDKILRSGKSLLALINDLLDISKIEAGKMELY 510 TP+NAIIG SE++++ DL S++ L K+ +G+ LL +IN++LD SK+EAGK+EL Sbjct: 471 TPMNAIIGMSELVLQT--DLTSQQR-NYLQKVQYAGELLLGIINNILDFSKMEAGKLELE 527 Query: 511 LETFNLKELIAGILDTIS-PXXXXXXXXXXXXXXXXXXXXYGDLIKLRQGILNLLSNASK 569 + F+++E++ + + GD ++L Q ++NL +NA K Sbjct: 528 QKPFSVEEVMGNLHSILGIQAEAKGLTLNFHLDPRIPPILVGDRLRLSQILINLGNNAVK 587 Query: 570 FTKDGIISFIVEEFKVD-EKDWLSFQVKDTGIGLTEEQMSKLFQPFTQADSSTTRKYGGT 628 FT G I+ + K + E+ L F V DTGIGLT +Q SKLFQ F Q ++ST+R+YGGT Sbjct: 588 FTNQGEITIRGQLLKTENEQTKLQFSVTDTGIGLTPDQQSKLFQWFNQGETSTSRQYGGT 647 Query: 629 GLGLAITRKFCQMMGGDIYLTSEIGVGSSF 658 GLGLAI++ ++MGGDI+L S +G GS+F Sbjct: 648 GLGLAISKSLTELMGGDIWLESVVGQGSTF 677 >SYNE-PCC-01-000891 sll1353 Length = 998 Score = 177 bits (449), Expect = 9e-47 Identities = 119/323 (36%), Positives = 182/323 (56%), Gaps = 17/323 (5%) Query: 363 ELGILAKSFNLMTNELRESNSSLE--KKNQELELAQKQ--LAVANSCLEEKVQQRTEELE 418 E+ L ++FN M L+ ++ K N E+ +A++ L V N L ++++R + +E Sbjct: 525 EVITLNENFNEMLITLQNQFKIIKQAKDNLEMRVAERTHTLIVINKQLAGEIEER-QRIE 583 Query: 419 NTVKXXXXXXXXXXXXNATKSIFLANMSHELRTPLNAIIGYSEMLIEEAEDLDSEELVPD 478 ++ N KS FLAN+SHE+RTP+NAI+G+ ++L+++ DL + Sbjct: 584 IKLREAKESAELA---NRVKSEFLANISHEIRTPMNAILGFCDLLLQK--DLSLSQTKKY 638 Query: 479 LDKILRSGKSLLALINDLLDISKIEAGKMELYLETFNLKELIAGILDTIS-PXXXXXXXX 537 L+ I S K LLALI+D+LDISKIEAGK+ ++LE +L+ +I I Sbjct: 639 LNAIGSSSKILLALIDDILDISKIEAGKLVIHLEPVDLRVIIREIKQIFDYKAESKSLLL 698 Query: 538 XXXXXXXXXXXXYGDLIKLRQGILNLLSNASKFTKDG--IISFIVEEFKVDEKDW---LS 592 Y D ++LRQ + NL+ NA KFT++G I VE +V + L+ Sbjct: 699 TIQIDETLNQAIYFDAVRLRQILFNLVGNALKFTEEGQVFIYIGVEGIQVRSQGTYISLA 758 Query: 593 FQVKDTGIGLTEEQMSKLFQPFTQADSSTTRKYGGTGLGLAITRKFCQMMGGDIYLTSEI 652 +V DTGIG+ E +K+F FTQ+ +TRKYGGTGLGL ITR+ ++GG+I L+S + Sbjct: 759 IEVTDTGIGIAPEDQAKIFDVFTQSQGQSTRKYGGTGLGLTITRRLTALLGGEISLSSRL 818 Query: 653 GVGSSFTIKLPKYAQL-NSAKND 674 G GS+F + P + NS K+D Sbjct: 819 GEGSTFILHFPAVRLVENSLKSD 841 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 176 bits (445), Expect = 3e-46 Identities = 111/297 (37%), Positives = 162/297 (54%), Gaps = 23/297 (7%) Query: 396 QKQLAVANSCLEEKVQQRTEELENTVKXXXXXXXXXXXXNATKSIFLANMSHELRTPLNA 455 Q +A+A + L EK ++R EL N K FLA MSHE+RTP+N Sbjct: 736 QMGIALAQAALLEKERERRRELAQKNLELEKATWAAEAANRAKGEFLAMMSHEIRTPMNG 795 Query: 456 IIGYSEMLIEEAEDLDSEELVPDLDKILRSGKSLLALINDLLDISKIEAGKMELYLETFN 515 +IG +E+LI DL+ ++L + I +SG++LL +IND+LD SKIEA K+ L + F Sbjct: 796 VIGMTELLI--MTDLNLQQL-DYVQTIRQSGETLLTIINDILDFSKIEADKLVLETQAFE 852 Query: 516 LKELIAGILDTISPXXXXXXXXXXXXXXXXX-XXXYGDLIKLRQGILNLLSNASKFTKDG 574 L+ LI +L+ P GD ++LRQ + NL+ NA KFT+ G Sbjct: 853 LRPLIETVLEMFGPIARAKHLELTYGIDPQTPARILGDQVRLRQILSNLIGNALKFTEKG 912 Query: 575 IISFIVEEFKVDEKDW-------------LSFQVKDTGIGLTEEQMSKLFQPFTQADSST 621 + V+ D + + F ++DTGIG+ ++ +LF+ F+Q DSST Sbjct: 913 EVVLTVKGEPFDPAESYHTILNLPHPSHRICFNLRDTGIGIPLDRQDRLFKSFSQVDSST 972 Query: 622 TRKYGGTGLGLAITRKFCQMMGGDIYLTSEIGVGSSF------TIKLPKYAQLNSAK 672 TRKYGGTGLGL I+++ QMMGG + +TSE GVGS+F T + P A+ +S + Sbjct: 973 TRKYGGTGLGLVISQRLTQMMGGVLTVTSEPGVGSNFRFCILTTAQAPALAEADSVQ 1029 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 166 bits (419), Expect = 3e-43 Identities = 113/303 (37%), Positives = 168/303 (55%), Gaps = 21/303 (6%) Query: 376 NELRESNSSLEKKNQELELAQKQLAVANSCLEEKVQQRTEELENTVKXXXXXXXXXXXXN 435 N+L +N L ++NQ+L+ +Q + + E+ + + E L+ V Sbjct: 304 NQLFTTNQILIEQNQKLQELYQQRELERAQREKILIEYNESLQKQVDLVRAKEIAESEAK 363 Query: 436 ATKSIFLANMSHELRTPLNAIIGYSEMLIEEAEDLDSEELVPDLDKILRSGKSLLALIND 495 A KS F+ANMSHELR+PLNAIIG+S++++ ++L E+ + I RSG+ LL LIN+ Sbjct: 364 A-KSTFVANMSHELRSPLNAIIGFSQLML-RTKNLPMEQ-YENAGIIQRSGEYLLNLINN 420 Query: 496 LLDISKIEAGKMELYLETFNLKELIAGILDTIS-PXXXXXXXXXXXXXXXXXXXXYGDLI 554 +LD SKIEAGK L F+L L+ + D + YGD I Sbjct: 421 ILDFSKIEAGKTHLNRHNFDLYLLLDDLEDMLHLKAANEGIELIFIRDHDLPRYVYGDEI 480 Query: 555 KLRQGILNLLSNASKFTKDGIISFIVEEFKVDE---------------KDWLSFQVKDTG 599 KLRQ +LNLLSNA KFT +G + + F+ E K WL F +KDTG Sbjct: 481 KLRQILLNLLSNAIKFTTEGEV-VLTSNFRNAEQQEVINPETSTEPKNKYWLDFTIKDTG 539 Query: 600 IGLTEEQMSKLFQPFTQADSSTTRKYGGTGLGLAITRKFCQMMGGDIYLTSEIGVGSSFT 659 G++E ++S LF+ F+Q +S + GTGLGLAITR+F ++MGGDI ++S + G++F+ Sbjct: 540 KGISEVELSHLFEAFSQTESGRNAQ-EGTGLGLAITRQFIKLMGGDINVSSVVDQGTTFS 598 Query: 660 IKL 662 + Sbjct: 599 FSI 601 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 158 bits (399), Expect = 6e-41 Identities = 94/228 (41%), Positives = 138/228 (60%), Gaps = 7/228 (3%) Query: 438 KSIFLANMSHELRTPLNAIIGYSEMLIEEAEDLDSEELVPDLDKILRSGKSLLALINDLL 497 K+ FLANMSHE+RTP+NA+IG + + ++ E L KI SG+ LL +IND+L Sbjct: 527 KADFLANMSHEIRTPMNAVIGMTHLALKTDLTPRQREY---LHKIRFSGQHLLGVINDIL 583 Query: 498 DISKIEAGKMELYLETFNLKELIAGILDTISPXXXXXXXXXXXXXXXXXXXXY-GDLIKL 556 D SKIEAGK+ + F+L +++ + IS + GD ++L Sbjct: 584 DFSKIEAGKLPMESIDFDLDKVLDNVATLISEKATNKGLELLFDIDRNLPRHFIGDPLRL 643 Query: 557 RQGILNLLSNASKFTKDGIISFIV--EEFKVDEKDWLSFQVKDTGIGLTEEQMSKLFQPF 614 Q ++N +NA KFT+ G I+ +V +E++ D+ L VKDTGIG+ E ++ LF F Sbjct: 644 GQILINYANNAVKFTEQGDITIVVRLQEYR-DQDVVLYLAVKDTGIGIKPEHIANLFNSF 702 Query: 615 TQADSSTTRKYGGTGLGLAITRKFCQMMGGDIYLTSEIGVGSSFTIKL 662 QADSSTTR +GGTGLGLAI ++ ++MGG++ + SE G GS+F K+ Sbjct: 703 QQADSSTTRNFGGTGLGLAICKRIAELMGGEVGVESEYGQGSTFWAKV 750 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 157 bits (396), Expect = 1e-40 Identities = 99/267 (37%), Positives = 147/267 (55%), Gaps = 14/267 (5%) Query: 388 KNQELELAQKQLAVANSCLEEKVQQRTEELENTVKXXXXXXXXXXXXNATKSIFLANMSH 447 + +++E+ Q Q + +++ ++ +EL N +KS FLA MSH Sbjct: 278 QRKQVEMIQGQSLEMERRMRQQLAEQNQEL-------VAATTAAEAANRSKSEFLATMSH 330 Query: 448 ELRTPLNAIIGYSEMLIEEAEDLDSEELVPDLDKILRSGKSLLALINDLLDISKIEAGKM 507 E+RTP+NAIIG + +L++ DL +++ I SG++LL LIND+LD SKIEAGK+ Sbjct: 331 EIRTPMNAIIGMTGLLLDT--DLTTQQKY-FAQTIRNSGETLLTLINDILDFSKIEAGKL 387 Query: 508 ELYLETFNLKELIAGILDTISPXXXXXXXXXXXXXXXXXX-XXYGDLIKLRQGILNLLSN 566 +L + F+L + + LD + P GD+ +LRQ ++NLLSN Sbjct: 388 DLEVYPFDLGQCLEEALDVVVPSARQKSLTLIRRFLTPIPPNLQGDVTRLRQILVNLLSN 447 Query: 567 ASKFTKDGIISFIVEEFKVDEKDW---LSFQVKDTGIGLTEEQMSKLFQPFTQADSSTTR 623 A KFT+ G + VE D + F V+DTGIG+ Q LFQ F+Q +SS TR Sbjct: 448 AVKFTEAGQVKVTVEVVDHDAAKGEYQICFAVQDTGIGIAPNQQQALFQAFSQGNSSITR 507 Query: 624 KYGGTGLGLAITRKFCQMMGGDIYLTS 650 ++GGTGLGLAI + +MGG I+ S Sbjct: 508 RFGGTGLGLAICVRLTALMGGTIWAES 534 >SYNE-PCC-01-000295 sll0474 Length = 806 Score = 152 bits (384), Expect = 3e-39 Identities = 97/280 (34%), Positives = 149/280 (53%), Gaps = 32/280 (11%) Query: 391 ELELAQKQLAVANSCLEEKVQQRTEELENTVKXXXXXXXXXXXXNATKSIFLANMSHELR 450 E++ A++QL ++N L + Q + E FLANMSHELR Sbjct: 396 EIKKAEEQLKLSNKILAKATQLKDE-------------------------FLANMSHELR 430 Query: 451 TPLNAIIGYSEMLIEEAEDLDSEELVPDLDKILRSGKSLLALINDLLDISKIEAGKMELY 510 TPLN+I+G E L + + + V L+ + SG+ LL+LIND+LD+SKIEAG+M+L Sbjct: 431 TPLNSILGMIETLQNQVYGPLNGKQVQSLEIVENSGRHLLSLINDILDLSKIEAGRMDLD 490 Query: 511 LETFNLKELIAGILDTISPXXXXXXXXXXXXXXXXXXXXYGDLIKLRQGILNLLSNASKF 570 L ++ L+ L + D +L Q ++NLL+NA KF Sbjct: 491 LNPTSVSALVNHSLTFVQQFAIQKQINLSSEIIPNLPDVLVDKRRLCQVLINLLNNAIKF 550 Query: 571 TKDG-----IISFIVEEFKVDEKD--WLSFQVKDTGIGLTEEQMSKLFQPFTQADSSTTR 623 T +G I E+ K + + LSF V DTGIG+ ++++ +F+PF Q DS+ R Sbjct: 551 TPEGGKVVVQADLIKEQGKENSQSPPQLSFTVFDTGIGIEADRLNNIFEPFVQIDSALNR 610 Query: 624 KYGGTGLGLAITRKFCQMMGGDIYLTSEIGVGSSFTIKLP 663 +Y GTGLGL++ +K ++ GG + +TS++ GS F I +P Sbjct: 611 RYDGTGLGLSLVKKIVELHGGSVTVTSKLNEGSRFKITIP 650 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 139 bits (349), Expect = 4e-35 Identities = 93/241 (38%), Positives = 129/241 (53%), Gaps = 20/241 (8%) Query: 435 NATKSIFLANMSHELRTPLNAIIGYSEMLIEEAEDLDSEELVPDLDKILRSGKSLLALIN 494 N K+ FLA++SHELRTPLNAIIG+S++L D P LD I RSG+ LL LIN Sbjct: 160 NRAKTEFLASISHELRTPLNAIIGFSQLL---HRDPSLAPHRPTLDIINRSGEHLLELIN 216 Query: 495 DLLDISKIEAGKMELYLETFNLKELIAGILDTISPXXXXXXXXXXXXXXXXXXXXYGDLI 554 D+L++SKIEAG+ L + + L LD + + I Sbjct: 217 DILEMSKIEAGRTTLNEKIIDCHRL----LDNLQALFQLRAQEKQLLLKVERSPEVPEWI 272 Query: 555 -----KLRQGILNLLSNASKFTKDGIISFIVEEFKVDEKD-------WLSFQVKDTGIGL 602 KLRQ ++NLL+NA KFT G ++ V+ + D WL F V DTG G+ Sbjct: 273 KTDGGKLRQVLINLLANAIKFTAQGGVTLKVKCLTAPQTDEGQGASIWLHFLVSDTGPGI 332 Query: 603 TEEQMSKLFQPFTQADSSTTRKYGGTGLGLAITRKFCQMMGGDIYLTSEIGVGSSFTIKL 662 +M +LF PF Q ++ + G GLGL I++KF Q+MGG I + S++ GS+F + Sbjct: 333 AAHEMDELFVPFAQTETG-LKSCQGNGLGLPISQKFVQLMGGQIQVRSKVDQGSAFFFAI 391 Query: 663 P 663 P Sbjct: 392 P 392 >SYNE-PCC-01-001294 sll1888 Length = 432 Score = 138 bits (348), Expect = 5e-35 Identities = 95/277 (34%), Positives = 150/277 (54%), Gaps = 25/277 (9%) Query: 393 ELAQKQ-LAVANSCLEEKVQQRTEELENTVKXXXXXXXXXXXXNATKSIFLANMSHELRT 451 ELA++ A+A++ L +++ Q T+ E + KS FLA+ +HELRT Sbjct: 162 ELAEQTGTAIAHATLYQELTQATKAAEEASRL--------------KSEFLASTTHELRT 207 Query: 452 PLNAIIGYSEMLIEEAEDLDSEELVPDLDKILRSGKSLLALINDLLDISKIEAGKMELYL 511 PLN IIG+ +++++ D ++E+ +++ +S LL LIND+LD++KIEAG++ + L Sbjct: 208 PLNGIIGFLRLILDDMADSEAEKH-EFVEEAYQSALLLLNLINDILDLAKIEAGRVGIEL 266 Query: 512 ETFNLKELIAGILDTISPXXXXXXXXXXXXXXXXX-XXXYGDLIKLRQGILNLLSNASKF 570 E + E++ + P YG+ L Q +LN++ NA KF Sbjct: 267 EVVDFSEVLQATENFALPQAQNKGLSFNLTAPNQGPLLVYGNQRWLLQVMLNIVGNAIKF 326 Query: 571 TKDGIISFIVEEFK-------VDEKDWLSFQVKDTGIGLTEEQMSKLFQPFTQADSSTTR 623 T +G I+ VE V + L V DTGIG++ EQ SKLF+ F Q D S ++ Sbjct: 327 THEGGITVAVEVMPRTVLWEGVQKPGLLKVSVGDTGIGVSLEQQSKLFKKFVQIDGSHSK 386 Query: 624 KYGGTGLGLAITRKFCQMMGGDI-YLTSEIGVGSSFT 659 YGGTGLGL I++K + MGG + + + G+GS+ T Sbjct: 387 AYGGTGLGLVISQKLVETMGGKVAFFSMGEGLGSTVT 423 >SYNE-PCC-01-001509 slr0210 Length = 417 Score = 135 bits (339), Expect = 5e-34 Identities = 85/229 (37%), Positives = 123/229 (53%), Gaps = 4/229 (1%) Query: 435 NATKSIFLANMSHELRTPLNAIIGYSEMLIEEAEDLDSEELVPDLDKILRSGKSLLALIN 494 + + +I L+++ HE RTPL AIIG++ ML +E + + + L S + LL+L+N Sbjct: 183 HTSMTINLSHIHHEFRTPLTAIIGFARMLRDELYGKLNPKQHQYVQGTLNSAEHLLSLVN 242 Query: 495 DLLDISKIEAGKMELYLETFNLKELIAGILDTISPXXXXXXXXXXXXXXXXXXXXYGDLI 554 D LD+SKI+A EL+ E +++L ++ + Y D Sbjct: 243 DFLDLSKIDARCEELFYEQVAVEDLCLAVISMVQTKAKEKQLALNLTIDDGVDFCYVDQR 302 Query: 555 KLRQGILNLLSNASKFTKDGIISFIVEEFKVDEKDWLSFQVKDTGIGLTEEQMSKLFQPF 614 + +Q ++NLLSN KFT G ++ V K +K L F V DTGIG+ E LFQPF Sbjct: 303 RWKQILINLLSNGVKFTPKGSVTLAV---KATDKA-LIFSVIDTGIGIDPEDQRDLFQPF 358 Query: 615 TQADSSTTRKYGGTGLGLAITRKFCQMMGGDIYLTSEIGVGSSFTIKLP 663 Q + GTGLGLA++R+ Q+ GGDI LTS GVGS F+ LP Sbjct: 359 KQISHPPSFAEKGTGLGLALSRRLAQLHGGDIQLTSTPGVGSCFSAILP 407 >SYNE-PCC-01-001517 slr0222 Length = 1178 Score = 121 bits (303), Expect = 8e-30 Identities = 80/229 (34%), Positives = 122/229 (53%), Gaps = 5/229 (2%) Query: 435 NATKSIFLANMSHELRTPLNAIIGYSEMLIEEAEDLDSEELVPDLDKILRSGKSLLALIN 494 N KS F+ +SHE RTPL +IIG+ E+L + + L +E+ ++ I S + L LI+ Sbjct: 937 NEAKSQFVDIVSHEFRTPLTSIIGFGELLSKYFDRLSTEKKQQYINNIQNSSQRLKQLID 996 Query: 495 DLLDISKIEAGKMELYLETFNLKELIAGILDTISPXXXXXXXXXXXXXXXXXXXXYGDLI 554 D+L IS+ +A K+E+ L NL+ L +++ S D+ Sbjct: 997 DVLSISRYDANKIEIELGNINLRNLANDLIENFSCGLGSEHNFELNYHLKPDEHSLVDVR 1056 Query: 555 KLRQGILNLLSNASKFTKDGIISFIVEEFKVDEKDWLSFQVKDTGIGLTEEQMSKLFQPF 614 LR + N+LSNA K++ G S I + DE + L FQV+D GIG+ + KLF+ F Sbjct: 1057 LLRHILENILSNAIKYSAPG--STITLDISKDE-EHLLFQVRDEGIGIPLQDQEKLFEAF 1113 Query: 615 TQADSSTTRKYGGTGLGLAITRKFCQMMGGDIYLTSEIGVGSSFTIKLP 663 +A S GTGLGL+I +++ + GG I + S G G++ IKLP Sbjct: 1114 HRA--SNVGDIPGTGLGLSIVKRYVEFQGGTIEVISMPGKGTTMVIKLP 1160 >SYNE-PCC-01-002778 slr1969 Length = 750 Score = 115 bits (288), Expect = 4e-28 Identities = 98/321 (30%), Positives = 154/321 (47%), Gaps = 21/321 (6%) Query: 356 APVLGEDELGILAKSFNLMTNELRESNSSLEKKNQELELAQKQLAVA--NSCLEEKVQQR 413 AP++ E +L L L+ ++ L+ + L + LAVA S L +VQ++ Sbjct: 296 APIIVEGQLWGL-----LIAHQCHHPRQWLDSEKNFLGQIGEHLAVAIVQSLLYSEVQKQ 350 Query: 414 TEELENTV----KXXXXXXXXXXXXNATKSIFLANMSHELRTPLNAIIGYSEMLI---EE 466 E V K N KS F+ N+SHELRTPL +IIG S L+ + Sbjct: 351 KNNFEKRVIERTKELRDTLMAAQAANLLKSQFINNISHELRTPLTSIIGLSATLLRWFDH 410 Query: 467 AEDLDSEELVPDLDKILRSGKSLLALINDLLDISKIEAGKMELYLETFNLKELIAGILDT 526 L + L I +GK LL IN ++ +S++E+G+ L ++F+L L ++ + Sbjct: 411 PASLPPAKQQYYLLNIQENGKKLLDQINSIIQLSQLESGQTALNCQSFSLHTLAQTVIHS 470 Query: 527 ISPXXXXXXXXXXXXXXXXXXXXY--GDLIKLRQGILNLLSNASKFTK-DGIISFIVEEF 583 + D +L Q + LL+NA KFT +G + I+ + Sbjct: 471 LLGVAIKQQINLELDYQINVGQDQFCADQERLDQILTQLLNNALKFTPAEGTV--ILRIW 528 Query: 584 KVDEKDWLSFQVKDTGIGLTEEQMSKLFQPFTQADSSTTRKYGGTGLGLAITRKFCQMMG 643 K E + FQV+DTGIG+ E+Q+ LF+ F A S T Y G+GLA+T++ ++ G Sbjct: 529 K--ESNQAIFQVEDTGIGINEQQLPVLFEAFKVAGDSYTSFYETGGVGLALTKQLVELHG 586 Query: 644 GDIYLTSEIGVGSSFTIKLPK 664 G I + S G G+ FT +P+ Sbjct: 587 GYIEVESSPGQGTIFTTVIPQ 607 >SYNE-PCC-01-000985 sll1475 Length = 297 Score = 96.7 bits (239), Expect = 2e-22 Identities = 70/235 (29%), Positives = 117/235 (49%), Gaps = 7/235 (2%) Query: 438 KSIFLANMSHELRTPLNAIIGYSEMLIE-EAEDLDSEELVPDLDKILRSGKSLLALINDL 496 K+ F + SHE RTPL+ + +++L E LD ++ +L +I S K+++ L++D+ Sbjct: 69 KTRFFSMASHEFRTPLSTALAAAQLLENSEVAWLDPDKRSRNLHRIQNSVKNMVQLLDDI 128 Query: 497 LDISKIEAGKMELYLETFNLKELIAGILDTISPXXXXXXXXXXXXXXXXXXXXYGDLIKL 556 L I++ EAGK+E +LK L ++ I + + + Sbjct: 129 LIINRAEAGKLEFNPNWLDLKLLFQQFIEEIQLSVSDQYYFDFICSAQDTKALVDERL-V 187 Query: 557 RQGILNLLSNASKFTKDGIISFIVEEFKVDEKDWLSFQVKDTGIGLTEEQMSKLFQPFTQ 616 R + NLLSNA K++ G I +D + + F+V D GIG++ E ++F+PF + Sbjct: 188 RSILSNLLSNAIKYSPGG--GQIKIALSLDSEQ-IIFEVTDQGIGISPEDQKQIFEPFHR 244 Query: 617 ADSSTTRKYGGTGLGLAITRKFCQMMGGDIYLTSEIGVGSSFTIKLPKYAQLNSA 671 + R GTGLGL + +K + G I L S + G++ TI L +Y L A Sbjct: 245 GKN--VRNITGTGLGLMVAKKCVDLHSGSILLKSAVDQGTTVTICLKRYNHLPRA 297 >SYNE-PCC-01-001690 slr0473 Length = 748 Score = 73.2 bits (178), Expect = 2e-15 Identities = 81/302 (26%), Positives = 136/302 (45%), Gaps = 36/302 (11%) Query: 369 KSFNLMTNELRESNSSLEKKNQELELAQKQLAVANSCLE--EKVQQRTEELENTVKXXXX 426 +SF+L +R + + + LA K+ A+ N L E++ Q LE + Sbjct: 473 QSFDLWKEIVRLQSLPWQSVEIQSALALKK-AIVNLILRQAEELAQLARNLERS------ 525 Query: 427 XXXXXXXXNATKSIFLANMSHELRTPLNAIIGYSEML---IEEAEDLDSEELVPDLDKIL 483 NA F SH+L+ PLN + Y ++L EA D D+++ + Sbjct: 526 --------NADLKKFAYIASHDLQEPLNQVSNYVQLLEMRYSEALDEDAKDFID----FA 573 Query: 484 RSGKSLL-ALINDLLDISKIEAGKMELYLETF-NLKELIAGILDTISPXXXXXXXXXXXX 541 +G SL+ LI+D+L +K++ +L TF +++E++ L + Sbjct: 574 VTGVSLMQTLIDDILTYAKVDTQYAQL---TFTDVQEVVDKALANLKQRIEESGAEIEVG 630 Query: 542 XXXXXXXXYGDLIKLRQGILNLLSNASKFTKDGIISFIVEEFKVDEKDWLSFQVKDTGIG 601 D I+L Q NL++N KF D S ++ + ++D F V+D GIG Sbjct: 631 SMPAVMA---DQIQLMQVFQNLIANGIKFAGDK--SPKIKIWGDRQEDAWVFAVQDNGIG 685 Query: 602 LTEEQMSKLFQPFTQADSSTTRKYGGTGLGLAITRKFCQMMGGDIYLTSEIGVGSSFTIK 661 + + ++F F + T +Y GTG+GLAI +K + G I+L S G GS+F Sbjct: 686 IDPQFFERIFVIFQRLH--TRDEYKGTGMGLAICKKIIEGHQGQIWLESNPGEGSTFYFS 743 Query: 662 LP 663 +P Sbjct: 744 IP 745 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.316 0.135 0.364 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,247 Number of Sequences: 78 Number of extensions: 2950 Number of successful extensions: 112 Number of sequences better than 1.0e-05: 15 Number of HSP's better than 0.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 47 Number of HSP's gapped (non-prelim): 21 length of query: 674 length of database: 48,235 effective HSP length: 69 effective length of query: 605 effective length of database: 42,853 effective search space: 25926065 effective search space used: 25926065 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 96 (41.6 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-001294 sll1888 (432 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-001294 sll1888 797 0.0 SYNE-PCC-01-002617 slr1759 170 9e-45 SYNE-PCC-01-002879 slr2104 149 2e-38 SYNE-PCC-01-000891 sll1353 143 1e-36 SYNE-PCC-01-000800 sll1228 140 1e-35 SYNE-PCC-01-001306 sll1905 139 1e-35 SYNE-PCC-01-002873 slr2098 138 4e-35 SYNE-PCC-01-001280 sll1871 130 1e-32 SYNE-PCC-01-000295 sll0474 129 2e-32 SYNE-PCC-01-001132 sll1672 114 8e-28 SYNE-PCC-01-001509 slr0210 108 2e-26 SYNE-PCC-01-001517 slr0222 83 1e-18 SYNE-PCC-01-002778 slr1969 78 6e-17 SYNE-PCC-01-000985 sll1475 72 3e-15 SYNE-PCC-01-001690 slr0473 66 2e-13 >SYNE-PCC-01-001294 sll1888 Length = 432 Score = 797 bits (2058), Expect = 0.0 Identities = 406/432 (93%), Positives = 406/432 (93%) Query: 1 MGQPSDLTESTLRFSSLDPLHPPVISQLTAIAKRIRRNSLHLPTIWQEAVDSIGSTLGVS 60 MGQPSDLTESTLRFSSLDPLHPPVISQLTAIAKRIRRNSLHLPTIWQEAVDSIGSTLGVS Sbjct: 1 MGQPSDLTESTLRFSSLDPLHPPVISQLTAIAKRIRRNSLHLPTIWQEAVDSIGSTLGVS 60 Query: 61 RCLLLTKDFQSRHLQIEAEFCQPTVTAFAALIVPEESEIWRQLFEQHQPITLYNVQFQGE 120 RCLLLTKDFQSRHLQIEAEFCQPTVTAFAALIVPEESEIWRQLFEQHQPITLYNVQFQGE Sbjct: 61 RCLLLTKDFQSRHLQIEAEFCQPTVTAFAALIVPEESEIWRQLFEQHQPITLYNVQFQGE 120 Query: 121 DLGGLWIFPTLYQDQANGYLCLQQVGPAPGPWHPXXXXXXXXXXXXXGTAIAHATLYQEL 180 DLGGLWIFPTLYQDQANGYLCLQQVGPAPGPWHP GTAIAHATLYQEL Sbjct: 121 DLGGLWIFPTLYQDQANGYLCLQQVGPAPGPWHPETEALLQELAEQTGTAIAHATLYQEL 180 Query: 181 TQATKAAEEASRLKSEFLASTTHELRTPLNGIIGFLRLILDDMADSEAEKHEFVEEAYQS 240 TQATKAAEEASRLKSEFLASTTHELRTPLNGIIGFLRLILDDMADSEAEKHEFVEEAYQS Sbjct: 181 TQATKAAEEASRLKSEFLASTTHELRTPLNGIIGFLRLILDDMADSEAEKHEFVEEAYQS 240 Query: 241 AXXXXXXXXXXXXXAKIEAGRVGIELEVVDFSEVLQATENFALPQAQNKGLSFNLTAPNQ 300 A AKIEAGRVGIELEVVDFSEVLQATENFALPQAQNKGLSFNLTAPNQ Sbjct: 241 ALLLLNLINDILDLAKIEAGRVGIELEVVDFSEVLQATENFALPQAQNKGLSFNLTAPNQ 300 Query: 301 GPLLVYGNQRWLLQVMLNIVGNAIKFTHEGGITVAVEVMPRTVLWEGVQKPGLLKVSVGD 360 GPLLVYGNQRWLLQVMLNIVGNAIKFTHEGGITVAVEVMPRTVLWEGVQKPGLLKVSVGD Sbjct: 301 GPLLVYGNQRWLLQVMLNIVGNAIKFTHEGGITVAVEVMPRTVLWEGVQKPGLLKVSVGD 360 Query: 361 TGIGVSLEQQSKLFKKFVQIDGSHSKAYGGTGLGLVISQKLVETMGGKVAFFSMGEGLGS 420 TGIGVSLEQQSKLFKKFVQIDGSHSKAYGGTGLGLVISQKLVETMGGKVAFFSMGEGLGS Sbjct: 361 TGIGVSLEQQSKLFKKFVQIDGSHSKAYGGTGLGLVISQKLVETMGGKVAFFSMGEGLGS 420 Query: 421 TVTFTVLLEELP 432 TVTFTVLLEELP Sbjct: 421 TVTFTVLLEELP 432 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 170 bits (430), Expect = 9e-45 Identities = 135/463 (29%), Positives = 216/463 (46%), Gaps = 43/463 (9%) Query: 1 MGQPSDLTESTLRFSSLDPLHPPV--ISQLTAIAKRIRRNSLHLPTIWQEAVDSIGSTLG 58 MG + T R + D L + I + I++ IRR SL I+Q A +G+ Sbjct: 559 MGYVGSCLDITDRKQAQDILQKKLNQILLMRKISQEIRR-SLQPTLIFQTAARQVGNVFA 617 Query: 59 VSRCLLLT-KDFQSRHLQIEAEFCQPTVTAFAALIVPEESEIWRQLFEQHQPITLYNVQ- 116 VSRCL+ + + + + AE+ T+ A + E + + + + + ++ Sbjct: 618 VSRCLIHNYSEATTLQVPVVAEYLGGQFTSLLAGEIAVEQAYDPTIIQGDRAMAVVDLDQ 677 Query: 117 ----------FQGEDLGGLWIFPTLYQDQANGYLCLQQVGPAPGPWHPXXXXXXXXXXXX 166 +Q + T YQ +ANG + L Q W Sbjct: 678 DLNSTHTKAFYQRFQVKSFLAVRTSYQGKANGIIALHQCD-RQRVWTADEIELLEAIAEQ 736 Query: 167 XGTAIAHATLYQ--------------ELTQATKAAEEASRLKSEFLASTTHELRTPLNGI 212 G A+A A L + EL +AT AAE A+R K EFLA +HE+RTP+NG+ Sbjct: 737 MGIALAQAALLEKERERRRELAQKNLELEKATWAAEAANRAKGEFLAMMSHEIRTPMNGV 796 Query: 213 IGFLRLILDDMADSEAEKHEFVEEAYQSAXXXXXXXXXXXXXAKIEAGRVGIELEVVDFS 272 IG L++ M D ++ ++V+ QS +KIEA ++ +E + + Sbjct: 797 IGMTELLI--MTDLNLQQLDYVQTIRQSGETLLTIINDILDFSKIEADKLVLETQAFELR 854 Query: 273 EVLQATENFALPQAQNKGLSFNLTAPNQGPLLVYGNQRWLLQVMLNIVGNAIKFTHEGGI 332 +++ P A+ K L Q P + G+Q L Q++ N++GNA+KFT +G + Sbjct: 855 PLIETVLEMFGPIARAKHLELTYGIDPQTPARILGDQVRLRQILSNLIGNALKFTEKGEV 914 Query: 333 TVAVEVMP-------RTVLWEGVQKPG-LLKVSVGDTGIGVSLEQQSKLFKKFVQIDGSH 384 + V+ P T+L + P + ++ DTGIG+ L++Q +LFK F Q+D S Sbjct: 915 VLTVKGEPFDPAESYHTIL--NLPHPSHRICFNLRDTGIGIPLDRQDRLFKSFSQVDSST 972 Query: 385 SKAYGGTGLGLVISQKLVETMGGKVAFFSMGEGLGSTVTFTVL 427 ++ YGGTGLGLVISQ+L + MGG V + G+GS F +L Sbjct: 973 TRKYGGTGLGLVISQRLTQMMGG-VLTVTSEPGVGSNFRFCIL 1014 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 149 bits (376), Expect = 2e-38 Identities = 93/251 (37%), Positives = 145/251 (57%), Gaps = 9/251 (3%) Query: 178 QELTQATKAAEEASRLKSEFLASTTHELRTPLNGIIGFLRLILDDMADSEAEKHEFVEEA 237 + L +A AE A++ KSEFLA+ +HE+RTP+N IIG L+L D +++ ++++ Sbjct: 442 ESLLEAKLVAEGATKAKSEFLANMSHEIRTPMNAIIGMSELVLQ--TDLTSQQRNYLQKV 499 Query: 238 YQSAXXXXXXXXXXXXXAKIEAGRVGIELEVVDFSEVLQATENFALPQAQNKGLSFNLTA 297 + +K+EAG++ +E + EV+ + QA+ KGL+ N Sbjct: 500 QYAGELLLGIINNILDFSKMEAGKLELEQKPFSVEEVMGNLHSILGIQAEAKGLTLNFHL 559 Query: 298 PNQGPLLVYGNQRWLLQVMLNIVGNAIKFTHEGGITVAVEVMPRTVLWEGVQKPGLLKVS 357 + P ++ G++ L Q+++N+ NA+KFT++G IT+ R L + + L+ S Sbjct: 560 DPRIPPILVGDRLRLSQILINLGNNAVKFTNQGEITI------RGQLLKTENEQTKLQFS 613 Query: 358 VGDTGIGVSLEQQSKLFKKFVQIDGSHSKAYGGTGLGLVISQKLVETMGGKVAFFSMGEG 417 V DTGIG++ +QQSKLF+ F Q + S S+ YGGTGLGL IS+ L E MGG + S+ G Sbjct: 614 VTDTGIGLTPDQQSKLFQWFNQGETSTSRQYGGTGLGLAISKSLTELMGGDIWLESV-VG 672 Query: 418 LGSTVTFTVLL 428 GST FTV L Sbjct: 673 QGSTFHFTVCL 683 >SYNE-PCC-01-000891 sll1353 Length = 998 Score = 143 bits (360), Expect = 1e-36 Identities = 86/241 (35%), Positives = 141/241 (58%), Gaps = 6/241 (2%) Query: 179 ELTQATKAAEEASRLKSEFLASTTHELRTPLNGIIGFLRLILD-DMADSEAEKHEFVEEA 237 +L +A ++AE A+R+KSEFLA+ +HE+RTP+N I+GF L+L D++ S+ +K ++ Sbjct: 585 KLREAKESAELANRVKSEFLANISHEIRTPMNAILGFCDLLLQKDLSLSQTKK--YLNAI 642 Query: 238 YQSAXXXXXXXXXXXXXAKIEAGRVGIELEVVDFSEVLQATENFALPQAQNKGLSFNLTA 297 S+ +KIEAG++ I LE VD +++ + +A++K L + Sbjct: 643 GSSSKILLALIDDILDISKIEAGKLVIHLEPVDLRVIIREIKQIFDYKAESKSLLLTIQI 702 Query: 298 PNQGPLLVYGNQRWLLQVMLNIVGNAIKFTHEGGITVAVEVMPRTVLWEGVQKPGLLKVS 357 +Y + L Q++ N+VGNA+KFT EG + + + V V +G L + Sbjct: 703 DETLNQAIYFDAVRLRQILFNLVGNALKFTEEGQVFIYIGVEGIQVRSQGTYIS--LAIE 760 Query: 358 VGDTGIGVSLEQQSKLFKKFVQIDGSHSKAYGGTGLGLVISQKLVETMGGKVAFFS-MGE 416 V DTGIG++ E Q+K+F F Q G ++ YGGTGLGL I+++L +GG+++ S +GE Sbjct: 761 VTDTGIGIAPEDQAKIFDVFTQSQGQSTRKYGGTGLGLTITRRLTALLGGEISLSSRLGE 820 Query: 417 G 417 G Sbjct: 821 G 821 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 140 bits (352), Expect = 1e-35 Identities = 111/376 (29%), Positives = 173/376 (46%), Gaps = 19/376 (5%) Query: 49 AVDSIGSTLGVSRCLLLTKDFQSRHLQIEAEFCQ----PTVTAFAALIVPEESEIWRQL- 103 A++ +G G R ++ D L + E+C P ++ F + V +W L Sbjct: 4 AIEQLGLLFGCQRVHVIYHDPAKDCLHMAEEWCAVGIAPRLSTFQGVPVATYPWLWANLQ 63 Query: 104 ---------FEQHQP-ITLYNVQFQGEDLGGLWIFPTLYQDQANGYLCLQQVGPAPGPWH 153 EQ P + V Q + + + + P + Q GY+ + + G W+ Sbjct: 64 DSEGVLVRDVEQMPPEAEMDKVSLQFDLVKSILVVPMVKDAQVLGYISMVHLHDNYG-WN 122 Query: 154 PXXXXXXXXXXXXXGTAIAHATLYQELTQATKAAEEASRLKSEFLASTTHELRTPLNGII 213 P A A LTQA +AA+ A+R K+EFLAS +HELRTPLN II Sbjct: 123 PEELNLAKLVGQFLAIAQARHQAETTLTQAKEAADAANRAKTEFLASISHELRTPLNAII 182 Query: 214 GFLRLILDDMADSEAEKHEFVEEAYQSAXXXXXXXXXXXXXAKIEAGRVGIELEVVDFSE 273 GF +L+ D S A ++ +S +KIEAGR + +++D Sbjct: 183 GFSQLLHRD--PSLAPHRPTLDIINRSGEHLLELINDILEMSKIEAGRTTLNEKIIDCHR 240 Query: 274 VLQATENFALPQAQNKGLSFNLTAPNQGPLLVYGNQRWLLQVMLNIVGNAIKFTHEGGIT 333 +L + +AQ K L + + P + + L QV++N++ NAIKFT +GG+T Sbjct: 241 LLDNLQALFQLRAQEKQLLLKVERSPEVPEWIKTDGGKLRQVLINLLANAIKFTAQGGVT 300 Query: 334 VAVEVMPRTVLWEGVQKPGLLKVSVGDTGIGVSLEQQSKLFKKFVQIDGSHSKAYGGTGL 393 + V+ + EG L V DTG G++ + +LF F Q + + K+ G GL Sbjct: 301 LKVKCLTAPQTDEGQGASIWLHFLVSDTGPGIAAHEMDELFVPFAQTE-TGLKSCQGNGL 359 Query: 394 GLVISQKLVETMGGKV 409 GL ISQK V+ MGG++ Sbjct: 360 GLPISQKFVQLMGGQI 375 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 139 bits (351), Expect = 1e-35 Identities = 93/270 (34%), Positives = 139/270 (51%), Gaps = 21/270 (7%) Query: 178 QELTQATKAAEEASRLKSEFLASTTHELRTPLNGIIGFLRLILDDMADSEAEKHEFVEEA 237 QEL AT AAE A+R KSEFLA+ +HE+RTP+N IIG L+LD D ++ F + Sbjct: 305 QELVAATTAAEAANRSKSEFLATMSHEIRTPMNAIIGMTGLLLD--TDLTTQQKYFAQTI 362 Query: 238 YQSAXXXXXXXXXXXXXAKIEAGRVGIELEVVDFSEVLQATENFALPQAQNKGLSFNLTA 297 S +KIEAG++ +E+ D + L+ + +P A+ K L+ Sbjct: 363 RNSGETLLTLINDILDFSKIEAGKLDLEVYPFDLGQCLEEALDVVVPSARQKSLTLIRRF 422 Query: 298 PNQGPLLVYGNQRWLLQVMLNIVGNAIKFTHEGGITVAVEVMPRTVLWEGVQKPGLLKVS 357 P + G+ L Q+++N++ NA+KFT G + V VEV+ + + + + Sbjct: 423 LTPIPPNLQGDVTRLRQILVNLLSNAVKFTEAGQVKVTVEVVDH----DAAKGEYQICFA 478 Query: 358 VGDTGIGVSLEQQSKLFKKFVQIDGSHSKAYGGTGLGLVISQKLVETMGGKV-------- 409 V DTGIG++ QQ LF+ F Q + S ++ +GGTGLGL I +L MGG + Sbjct: 479 VQDTGIGIAPNQQQALFQAFSQGNSSITRRFGGTGLGLAICVRLTALMGGTIWAESNGCV 538 Query: 410 -----AFFSMGEGL--GSTVTFTVLLEELP 432 + +G+ GST FTV L LP Sbjct: 539 VGNPPELWQIGQPTIEGSTFYFTVNLTVLP 568 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 138 bits (347), Expect = 4e-35 Identities = 89/252 (35%), Positives = 132/252 (52%), Gaps = 9/252 (3%) Query: 179 ELTQATKAAEEASRLKSEFLASTTHELRTPLNGIIGFLRLILDDMADSEAEKHEFVEEAY 238 E+ +A + AEEASR+K++FLA+ +HE+RTP+N +IG L L D + E++ + Sbjct: 512 EMKRAKELAEEASRIKADFLANMSHEIRTPMNAVIGMTHLALK--TDLTPRQREYLHKIR 569 Query: 239 QSAXXXXXXXXXXXXXAKIEAGRVGIELEVVDFSEVLQATENFALPQAQNKGLSFNLTAP 298 S +KIEAG++ +E D +VL +A NKGL Sbjct: 570 FSGQHLLGVINDILDFSKIEAGKLPMESIDFDLDKVLDNVATLISEKATNKGLELLFDID 629 Query: 299 NQGPLLVYGNQRWLLQVMLNIVGNAIKFTHEGGITVAVEVMPRTVLWEGVQKPGLLKVSV 358 P G+ L Q+++N NA+KFT +G IT+ V L E + +L ++V Sbjct: 630 RNLPRHFIGDPLRLGQILINYANNAVKFTEQGDITIVVR------LQEYRDQDVVLYLAV 683 Query: 359 GDTGIGVSLEQQSKLFKKFVQIDGSHSKAYGGTGLGLVISQKLVETMGGKVAFFSMGEGL 418 DTGIG+ E + LF F Q D S ++ +GGTGLGL I +++ E MGG+V S G Sbjct: 684 KDTGIGIKPEHIANLFNSFQQADSSTTRNFGGTGLGLAICKRIAELMGGEVGVES-EYGQ 742 Query: 419 GSTVTFTVLLEE 430 GST V L++ Sbjct: 743 GSTFWAKVCLQK 754 >SYNE-PCC-01-001280 sll1871 Length = 674 Score = 130 bits (326), Expect = 1e-32 Identities = 85/245 (34%), Positives = 133/245 (54%), Gaps = 10/245 (4%) Query: 180 LTQATKAAEEASRLKSEFLASTTHELRTPLNGIIGFLRLILDDMADSEAEKH-EFVEEAY 238 L A+ AE A+ KS FLA+ +HELRTPLN IIG+ +++++ D ++E+ +++ Sbjct: 424 LELASSEAEAANATKSIFLANMSHELRTPLNAIIGYSEMLIEEAEDLDSEELVPDLDKIL 483 Query: 239 QSAXXXXXXXXXXXXXAKIEAGRVGIELEVVDFSEVLQATENFALPQAQNKGLSFNLTAP 298 +S +KIEAG++ + LE + E++ + P +N + Sbjct: 484 RSGKSLLALINDLLDISKIEAGKMELYLETFNLKELIAGILDTISPLLKNNNNKLEVEIS 543 Query: 299 NQGPLLVYGNQRWLLQVMLNIVGNAIKFTHEGGITVAVEVMPRTVLWEGVQKPGLLKVSV 358 + VYG+ L Q +LN++ NA KFT +G I+ VE V + L V Sbjct: 544 LESEE-VYGDLIKLRQGILNLLSNASKFTKDGIISFIVEEFK-------VDEKDWLSFQV 595 Query: 359 GDTGIGVSLEQQSKLFKKFVQIDGSHSKAYGGTGLGLVISQKLVETMGGKVAFFSMGEGL 418 DTGIG++ EQ SKLF+ F Q D S ++ YGGTGLGL I++K + MGG + + + G+ Sbjct: 596 KDTGIGLTEEQMSKLFQPFTQADSSTTRKYGGTGLGLAITRKFCQMMGGDI-YLTSEIGV 654 Query: 419 GSTVT 423 GS+ T Sbjct: 655 GSSFT 659 >SYNE-PCC-01-000295 sll0474 Length = 806 Score = 129 bits (323), Expect = 2e-32 Identities = 84/256 (32%), Positives = 138/256 (53%), Gaps = 5/256 (1%) Query: 178 QELTQATKAAEEASRLKSEFLASTTHELRTPLNGIIGFLRLILDDM-ADSEAEKHEFVEE 236 ++L + K +A++LK EFLA+ +HELRTPLN I+G + + + + ++ + +E Sbjct: 402 EQLKLSNKILAKATQLKDEFLANMSHELRTPLNSILGMIETLQNQVYGPLNGKQVQSLEI 461 Query: 237 AYQSAXXXXXXXXXXXXXAKIEAGRVGIELEVVDFSEVLQATENFALPQAQNKGLSFNLT 296 S +KIEAGR+ ++L S ++ + F A K ++ + Sbjct: 462 VENSGRHLLSLINDILDLSKIEAGRMDLDLNPTSVSALVNHSLTFVQQFAIQKQINLSSE 521 Query: 297 A-PNQGPLLVYGNQRWLLQVMLNIVGNAIKFTHEGGITVAVEVMPRTVLWEGVQKPGLLK 355 PN +LV ++R L QV++N++ NAIKFT EGG V + + E Q P L Sbjct: 522 IIPNLPDVLV--DKRRLCQVLINLLNNAIKFTPEGGKVVVQADLIKEQGKENSQSPPQLS 579 Query: 356 VSVGDTGIGVSLEQQSKLFKKFVQIDGSHSKAYGGTGLGLVISQKLVETMGGKVAFFS-M 414 +V DTGIG+ ++ + +F+ FVQID + ++ Y GTGLGL + +K+VE GG V S + Sbjct: 580 FTVFDTGIGIEADRLNNIFEPFVQIDSALNRRYDGTGLGLSLVKKIVELHGGSVTVTSKL 639 Query: 415 GEGLGSTVTFTVLLEE 430 EG +T + ++ Sbjct: 640 NEGSRFKITIPCVFQD 655 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 114 bits (284), Expect = 8e-28 Identities = 81/266 (30%), Positives = 134/266 (50%), Gaps = 26/266 (9%) Query: 179 ELTQATKAAEEASRLKSEFLASTTHELRTPLNGIIGFLRLILDDMADSEAEKHEFVEEAY 238 +L +A + AE ++ KS F+A+ +HELR+PLN IIGF +L+L + E++E Sbjct: 350 DLVRAKEIAESEAKAKSTFVANMSHELRSPLNAIIGFSQLMLRTK-NLPMEQYENAGIIQ 408 Query: 239 QSAXXXXXXXXXXXXXAKIEAGRVGIELEVVDFSEVLQATENFALPQAQNKGLSFNLTAP 298 +S +KIEAG+ + D +L E+ +A N+G+ Sbjct: 409 RSGEYLLNLINNILDFSKIEAGKTHLNRHNFDLYLLLDDLEDMLHLKAANEGIELIFIRD 468 Query: 299 NQGPLLVYGNQRWLLQVMLNIVGNAIKFTHEGGITVA---------------VEVMPRTV 343 + P VYG++ L Q++LN++ NAIKFT EG + + P+ Sbjct: 469 HDLPRYVYGDEIKLRQILLNLLSNAIKFTTEGEVVLTSNFRNAEQQEVINPETSTEPKNK 528 Query: 344 LWEGVQKPGLLKVSVGDTGIGVSLEQQSKLFKKFVQIDGSHSKAYGGTGLGLVISQKLVE 403 W L ++ DTG G+S + S LF+ F Q + S A GTGLGL I+++ ++ Sbjct: 529 YW--------LDFTIKDTGKGISEVELSHLFEAFSQTE-SGRNAQEGTGLGLAITRQFIK 579 Query: 404 TMGGKVAFFSMGEGLGSTVTFTVLLE 429 MGG + S+ + G+T +F++L++ Sbjct: 580 LMGGDINVSSVVD-QGTTFSFSILVD 604 >SYNE-PCC-01-001509 slr0210 Length = 417 Score = 108 bits (271), Expect = 2e-26 Identities = 73/224 (32%), Positives = 116/224 (51%), Gaps = 14/224 (6%) Query: 198 LASTTHELRTPLNGIIGFLRLILDDMADS-EAEKHEFVEEAYQSAXXXXXXXXXXXXXAK 256 L+ HE RTPL IIGF R++ D++ ++H++V+ SA +K Sbjct: 190 LSHIHHEFRTPLTAIIGFARMLRDELYGKLNPKQHQYVQGTLNSAEHLLSLVNDFLDLSK 249 Query: 257 IEAGRVGIELEVVDFSEVLQATENFALPQAQNKGLSFNLTAPNQGPLLVYGNQRWLLQVM 316 I+A + E V ++ A + +A+ K L+ NLT + G Y +QR Q++ Sbjct: 250 IDARCEELFYEQVAVEDLCLAVISMVQTKAKEKQLALNLTI-DDGVDFCYVDQRRWKQIL 308 Query: 317 LNIVGNAIKFTHEGGITVAVEVMPRTVLWEGVQKPGLLKVSVGDTGIGVSLEQQSKLFKK 376 +N++ N +KFT +G +T+AV+ + +++ SV DTGIG+ E Q LF+ Sbjct: 309 INLLSNGVKFTPKGSVTLAVKATDKALIF-----------SVIDTGIGIDPEDQRDLFQP 357 Query: 377 FVQIDGSHSKAYGGTGLGLVISQKLVETMGGKVAFFSMGEGLGS 420 F QI S A GTGLGL +S++L + GG + S G+GS Sbjct: 358 FKQISHPPSFAEKGTGLGLALSRRLAQLHGGDIQLTST-PGVGS 400 >SYNE-PCC-01-001517 slr0222 Length = 1178 Score = 83.2 bits (204), Expect = 1e-18 Identities = 74/250 (29%), Positives = 122/250 (48%), Gaps = 25/250 (10%) Query: 189 EASRLKSEFLASTTHELRTPLNGIIGFLRLILD--DMADSEAEKHEFVEEAYQSAXXXXX 246 E + KS+F+ +HE RTPL IIGF L+ D +E +K +++ S+ Sbjct: 935 ELNEAKSQFVDIVSHEFRTPLTSIIGFGELLSKYFDRLSTE-KKQQYINNIQNSSQRLKQ 993 Query: 247 XXXXXXXXAKIEAGRVGIELEVVDFSEVL-QATENFA--LPQAQNKGLSFNLTAPNQGPL 303 ++ +A ++ IEL ++ + ENF+ L N L+++L P++ L Sbjct: 994 LIDDVLSISRYDANKIEIELGNINLRNLANDLIENFSCGLGSEHNFELNYHL-KPDEHSL 1052 Query: 304 LVYGNQRWLLQVMLNIVGNAIKFTHEGG-ITVAVEVMPRTVLWEGVQKPGLLKVSVGDTG 362 + + R L ++ NI+ NAIK++ G IT+ + +L++ V D G Sbjct: 1053 V---DVRLLRHILENILSNAIKYSAPGSTITLDISKDEEHLLFQ-----------VRDEG 1098 Query: 363 IGVSLEQQSKLFKKFVQIDGSHSKAYGGTGLGLVISQKLVETMGGKVAFFSMGEGLGSTV 422 IG+ L+ Q KLF+ F + S+ GTGLGL I ++ VE GG + SM G G+T+ Sbjct: 1099 IGIPLQDQEKLFEAFHR--ASNVGDIPGTGLGLSIVKRYVEFQGGTIEVISM-PGKGTTM 1155 Query: 423 TFTVLLEELP 432 + L P Sbjct: 1156 VIKLPLNPAP 1165 >SYNE-PCC-01-002778 slr1969 Length = 750 Score = 77.8 bits (190), Expect = 6e-17 Identities = 68/263 (25%), Positives = 118/263 (44%), Gaps = 22/263 (8%) Query: 178 QELTQATKAAEEASRLKSEFLASTTHELRTPLNGIIGFLRLIL---DDMAD-SEAEKHEF 233 +EL AA+ A+ LKS+F+ + +HELRTPL IIG +L D A A++ + Sbjct: 363 KELRDTLMAAQAANLLKSQFINNISHELRTPLTSIIGLSATLLRWFDHPASLPPAKQQYY 422 Query: 234 VEEAYQSAXXXXXXXXXXXXXAKIEAGRVGIELEVVDF----SEVLQATENFALPQAQNK 289 + ++ +++E+G+ + + V+ + A+ Q N Sbjct: 423 LLNIQENGKKLLDQINSIIQLSQLESGQTALNCQSFSLHTLAQTVIHSLLGVAIKQQINL 482 Query: 290 GLSFNLTAPNQGPLLVYGNQRWLLQVMLNIVGNAIKFTHEGGITVAVEVMPRTVLWEGVQ 349 L + + N G +Q L Q++ ++ NA+KFT G TV+ + Sbjct: 483 ELDYQI---NVGQDQFCADQERLDQILTQLLNNALKFTPAEG----------TVILRIWK 529 Query: 350 KPGLLKVSVGDTGIGVSLEQQSKLFKKFVQIDGSHSKAYGGTGLGLVISQKLVETMGGKV 409 + V DTGIG++ +Q LF+ F S++ Y G+GL ++++LVE GG + Sbjct: 530 ESNQAIFQVEDTGIGINEQQLPVLFEAFKVAGDSYTSFYETGGVGLALTKQLVELHGGYI 589 Query: 410 AFFSMGEGLGSTVTFTVLLEELP 432 S G G+ T + + P Sbjct: 590 EVES-SPGQGTIFTTVIPQQNFP 611 >SYNE-PCC-01-000985 sll1475 Length = 297 Score = 72.0 bits (175), Expect = 3e-15 Identities = 64/250 (25%), Positives = 120/250 (48%), Gaps = 21/250 (8%) Query: 178 QELTQATKAAEEASRLKSEFLASTTHELRTPLNGIIGFLRLILD-DMADSEAEKH-EFVE 235 +E+ A + +E SRLK+ F + +HE RTPL+ + +L+ + ++A + +K + Sbjct: 53 EEVRLALEREKELSRLKTRFFSMASHEFRTPLSTALAAAQLLENSEVAWLDPDKRSRNLH 112 Query: 236 EAYQSAXXXXXXXXXXXXXAKIEAGRVGIELEVVDFSEVLQA-TENFALPQAQNKGLSFN 294 S + EAG++ +D + Q E L + F Sbjct: 113 RIQNSVKNMVQLLDDILIINRAEAGKLEFNPNWLDLKLLFQQFIEEIQLSVSDQYYFDFI 172 Query: 295 LTAPNQGPLLVYGNQRWLLQVMLNIVGNAIKFTHEGG-ITVAVEVMPRTVLWEGVQKPGL 353 +A + L+ ++R + ++ N++ NAIK++ GG I +A+ + +++E Sbjct: 173 CSAQDTKALV---DERLVRSILSNLLSNAIKYSPGGGQIKIALSLDSEQIIFE------- 222 Query: 354 LKVSVGDTGIGVSLEQQSKLFKKFVQIDGSHSKAYGGTGLGLVISQKLVETMGGKVAFFS 413 V D GIG+S E Q ++F+ F + G + + GTGLGL++++K V+ G + S Sbjct: 223 ----VTDQGIGISPEDQKQIFEPFHR--GKNVRNITGTGLGLMVAKKCVDLHSGSILLKS 276 Query: 414 MGEGLGSTVT 423 + G+TVT Sbjct: 277 AVD-QGTTVT 285 >SYNE-PCC-01-001690 slr0473 Length = 748 Score = 65.9 bits (159), Expect = 2e-13 Identities = 61/253 (24%), Positives = 114/253 (45%), Gaps = 25/253 (9%) Query: 178 QELTQATKAAEEASRLKSEFLASTTHELRTPLNGIIGFLRLILDDMADSEA---EKHEFV 234 +EL Q + E ++ +F +H+L+ PLN + +++L+ +M SEA + +F+ Sbjct: 513 EELAQLARNLERSNADLKKFAYIASHDLQEPLNQVSNYVQLL--EMRYSEALDEDAKDFI 570 Query: 235 EEAYQSAXXXXXXXXXXXXXAKIEAGRVGIELEVVDFSEVLQATENFALPQAQNKGLSFN 294 + A AK++ +L D EV+ + + G Sbjct: 571 DFAVTGVSLMQTLIDDILTYAKVDTQYA--QLTFTDVQEVVDKALANLKQRIEESGAEIE 628 Query: 295 LTAPNQGPLLVYGNQRWLLQVMLNIVGNAIKFTHEGGITVAVEVMPRTVLWEGVQKPGLL 354 + + V +Q L+QV N++ N IKF A + P+ +W G ++ Sbjct: 629 VGSMP----AVMADQIQLMQVFQNLIANGIKF--------AGDKSPKIKIW-GDRQEDAW 675 Query: 355 KVSVGDTGIGVSLEQQSKLFKKFVQIDGSHSK-AYGGTGLGLVISQKLVETMGGKVAFFS 413 +V D GIG+ + ++F F ++ H++ Y GTG+GL I +K++E G++ + Sbjct: 676 VFAVQDNGIGIDPQFFERIFVIFQRL---HTRDEYKGTGMGLAICKKIIEGHQGQI-WLE 731 Query: 414 MGEGLGSTVTFTV 426 G GST F++ Sbjct: 732 SNPGEGSTFYFSI 744 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.318 0.135 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,256 Number of Sequences: 78 Number of extensions: 1446 Number of successful extensions: 55 Number of sequences better than 1.0e-05: 15 Number of HSP's better than 0.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 6 Number of HSP's gapped (non-prelim): 16 length of query: 432 length of database: 48,235 effective HSP length: 65 effective length of query: 367 effective length of database: 43,165 effective search space: 15841555 effective search space used: 15841555 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 94 (40.8 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-001306 sll1905 (1014 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-001306 sll1905 1887 0.0 SYNE-PCC-01-002617 slr1759 368 e-104 SYNE-PCC-01-002873 slr2098 289 3e-80 SYNE-PCC-01-002879 slr2104 223 2e-60 SYNE-PCC-01-000891 sll1353 169 5e-44 SYNE-PCC-01-001280 sll1871 154 2e-39 SYNE-PCC-01-001132 sll1672 152 4e-39 SYNE-PCC-01-000295 sll0474 150 2e-38 SYNE-PCC-01-001294 sll1888 141 1e-35 SYNE-PCC-01-000800 sll1228 136 4e-34 SYNE-PCC-01-002778 slr1969 108 8e-26 SYNE-PCC-01-001509 slr0210 107 2e-25 SYNE-PCC-01-001517 slr0222 104 2e-24 SYNE-PCC-01-001133 sll1673 92 1e-20 SYNE-PCC-01-000985 sll1475 87 3e-19 SYNE-PCC-01-001690 slr0473 86 7e-19 SYNE-PCC-01-002788 slr1982 76 4e-16 SYNE-PCC-01-001461 slr0115 72 1e-14 SYNE-PCC-01-002086 slr1042 69 5e-14 SYNE-PCC-01-000414 sll0649 67 2e-13 SYNE-PCC-01-002618 slr1760 63 4e-12 SYNE-PCC-01-002731 slr1909 63 5e-12 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 60 3e-11 SYNE-PCC-01-002033 slr0947 56 5e-10 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 55 8e-10 SYNE-PCC-01-002486 slr1584 54 2e-09 SYNE-PCC-01-000523 sll0797 53 5e-09 SYNE-PCC-01-001437 slr0081 50 3e-08 SYNE-PCC-01-000242 sll0396 49 6e-08 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 49 6e-08 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 49 1e-07 SYNE-PCC-01-002672 slr1837 48 1e-07 SYNE-PCC-01-000518 sll0789 48 2e-07 SYNE-PCC-01-002489 slr1588 47 3e-07 SYNE-PCC-01-002635 slr1783 47 4e-07 SYNE-PCC-01-002221 slr1213 45 8e-07 SYNE-PCC-01-001575 slr0312 43 5e-06 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 1887 bits (4889), Expect = 0.0 Identities = 962/1014 (94%), Positives = 962/1014 (94%) Query: 1 MSPSQPHPPIATFEPESFLILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQA 60 MSPSQPHPPIATFEPESFLILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQA Sbjct: 1 MSPSQPHPPIATFEPESFLILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQA 60 Query: 61 QXXXXXXXXXXXXXXXXEVCDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTK 120 Q EVCDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTK Sbjct: 61 QPDLILLDLMMPGMDGLEVCDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTK 120 Query: 121 PFSPPELLARVKTHLELKQTRDNLHHTLLEQARTAEALACTSTRLGILVQNMQAGVLMTD 180 PFSPPELLARVKTHLELKQTRDNLHHTLLEQARTAEALACTSTRLGILVQNMQAGVLMTD Sbjct: 121 PFSPPELLARVKTHLELKQTRDNLHHTLLEQARTAEALACTSTRLGILVQNMQAGVLMTD 180 Query: 181 AQGTIVVVNPEFARLFNLGFPADLLLGKNLTAIAPRINGLISHGQGVTHNFLAIESPEPL 240 AQGTIVVVNPEFARLFNLGFPADLLLGKNLTAIAPRINGLISHGQGVTHNFLAIESPEPL Sbjct: 181 AQGTIVVVNPEFARLFNLGFPADLLLGKNLTAIAPRINGLISHGQGVTHNFLAIESPEPL 240 Query: 241 LKVELALEDGRFFERDYVPIMLGDSSQGHFWLYRDISQRKQVEMIQGQSLEMERRMRQQL 300 LKVELALEDGRFFERDYVPIMLGDSSQGHFWLYRDISQRKQVEMIQGQSLEMERRMRQQL Sbjct: 241 LKVELALEDGRFFERDYVPIMLGDSSQGHFWLYRDISQRKQVEMIQGQSLEMERRMRQQL 300 Query: 301 AEQNQELVXXXXXXXXXNRSKSEFLATMSHEIRTPMNAIIGMXXXXXXXXXXXQQKYFAQ 360 AEQNQELV NRSKSEFLATMSHEIRTPMNAIIGM QQKYFAQ Sbjct: 301 AEQNQELVAATTAAEAANRSKSEFLATMSHEIRTPMNAIIGMTGLLLDTDLTTQQKYFAQ 360 Query: 361 TIRNSGETLLTLINDILDFSKIEAGKLDLEVYPFDLGQCLEEALDVVVPSARQKSLTLIR 420 TIRNSGETLLTLINDILDFSKIEAGKLDLEVYPFDLGQCLEEALDVVVPSARQKSLTLIR Sbjct: 361 TIRNSGETLLTLINDILDFSKIEAGKLDLEVYPFDLGQCLEEALDVVVPSARQKSLTLIR 420 Query: 421 RFLTPIPPNLQGDVTRLRQILVNLLSNAVKFTEAGQVKVTVEVVDHDAAKGEYQICFAVQ 480 RFLTPIPPNLQGDVTRLRQILVNLLSNAVKFTEAGQVKVTVEVVDHDAAKGEYQICFAVQ Sbjct: 421 RFLTPIPPNLQGDVTRLRQILVNLLSNAVKFTEAGQVKVTVEVVDHDAAKGEYQICFAVQ 480 Query: 481 DTGIGIAPNQQQALFQAFSQGNSSITRRFGGTGLGLAICVRLTALMGGTIWAESNGCVVG 540 DTGIGIAPNQQQALFQAFSQGNSSITRRFGGTGLGLAICVRLTALMGGTIWAESNGCVVG Sbjct: 481 DTGIGIAPNQQQALFQAFSQGNSSITRRFGGTGLGLAICVRLTALMGGTIWAESNGCVVG 540 Query: 541 NPPELWQIGQPTIEGSTFYFTVNLTVLPSCAYSVHNLRHSLFIGRSVLVADYDEGRGTRM 600 NPPELWQIGQPTIEGSTFYFTVNLTVLPSCAYSVHNLRHSLFIGRSVLVADYDEGRGTRM Sbjct: 541 NPPELWQIGQPTIEGSTFYFTVNLTVLPSCAYSVHNLRHSLFIGRSVLVADYDEGRGTRM 600 Query: 601 RNLLASWRLQAEQITFSSPAKLGEDLKSRLTQKNYGALILHCPYPEGRGKQFTDFDLGKI 660 RNLLASWRLQAEQITFSSPAKLGEDLKSRLTQKNYGALILHCPYPEGRGKQFTDFDLGKI Sbjct: 601 RNLLASWRLQAEQITFSSPAKLGEDLKSRLTQKNYGALILHCPYPEGRGKQFTDFDLGKI 660 Query: 661 TTWAPTEQDIPVLVATDIYLSPGERYSGDKPPVQAWIKSPINPDELENTLVDVLGQTEPP 720 TTWAPTEQDIPVLVATDIYLSPGERYSGDKPPVQAWIKSPINPDELENTLVDVLGQTEPP Sbjct: 661 TTWAPTEQDIPVLVATDIYLSPGERYSGDKPPVQAWIKSPINPDELENTLVDVLGQTEPP 720 Query: 721 TLVSTEAISGPLFPYSSSNLTILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALA 780 TLVSTEAISGPLFPYSSSNLTILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALA Sbjct: 721 TLVSTEAISGPLFPYSSSNLTILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALA 780 Query: 781 KGDYDVVLMDVEMPEMDGLTATEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDY 840 KGDYDVVLMDVEMPEMDGLTATEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDY Sbjct: 781 KGDYDVVLMDVEMPEMDGLTATEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDY 840 Query: 841 VSKPIRXXXXXXXXXXXXXXXXSTSQDRMATVSCVSAFEAKPSPSSPCPEDPAGTTLPPI 900 VSKPIR STSQDRMATVSCVSAFEAKPSPSSPCPEDPAGTTLPPI Sbjct: 841 VSKPIRLEALQQALQVAATALQSTSQDRMATVSCVSAFEAKPSPSSPCPEDPAGTTLPPI 900 Query: 901 DQDIICSLRDLDRENGQLILREIIDIYCQTAPELLQRIKLAIANQDWGNLSSAAHTLGSS 960 DQDIICSLRDLDRENGQLILREIIDIYCQTAPELLQRIKLAIANQDWGNLSSAAHTLGSS Sbjct: 901 DQDIICSLRDLDRENGQLILREIIDIYCQTAPELLQRIKLAIANQDWGNLSSAAHTLGSS 960 Query: 961 SANLGAVLLAQQAKTLENLTRQRDSRAMDPGHFPTLAASYERVQGELKTMLDRL 1014 SANLGAVLLAQQAKTLENLTRQRDSRAMDPGHFPTLAASYERVQGELKTMLDRL Sbjct: 961 SANLGAVLLAQQAKTLENLTRQRDSRAMDPGHFPTLAASYERVQGELKTMLDRL 1014 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 368 bits (945), Expect = e-104 Identities = 262/736 (35%), Positives = 368/736 (50%), Gaps = 71/736 (9%) Query: 272 LYRDISQRKQVEMIQGQSLEMERRMRQQLAEQNQELVXXXXXXXXXNRSKSEFLATMSHE 331 L I+++ + + Q LE ER R++LA++N EL NR+K EFLA MSHE Sbjct: 729 LLEAIAEQMGIALAQAALLEKERERRRELAQKNLELEKATWAAEAANRAKGEFLAMMSHE 788 Query: 332 IRTPMNAIIGMXXXXXXXXXXXQQKYFAQTIRNSGETLLTLINDILDFSKIEAGKLDLEV 391 IRTPMN +IGM QQ + QTIR SGETLLT+INDILDFSKIEA KL LE Sbjct: 789 IRTPMNGVIGMTELLIMTDLNLQQLDYVQTIRQSGETLLTIINDILDFSKIEADKLVLET 848 Query: 392 YPFDLGQCLEEALDVVVPSARQKSLTLIRRFLTPIPPNLQGDVTRLRQILVNLLSNAVKF 451 F+L +E L++ P AR K L L P + GD RLRQIL NL+ NA+KF Sbjct: 849 QAFELRPLIETVLEMFGPIARAKHLELTYGIDPQTPARILGDQVRLRQILSNLIGNALKF 908 Query: 452 TEAGQVKVTVEVVDHDAAKG----------EYQICFAVQDTGIGIAPNQQQALFQAFSQG 501 TE G+V +TV+ D A+ ++ICF ++DTGIGI ++Q LF++FSQ Sbjct: 909 TEKGEVVLTVKGEPFDPAESYHTILNLPHPSHRICFNLRDTGIGIPLDRQDRLFKSFSQV 968 Query: 502 NSSITRRFGGTGLGLAICVRLTALMGGTIWAESNGCVVGNPPELWQIGQPTIEGSTFYFT 561 +SS TR++GGTGLGL I RLT +MGG + S V GS F F Sbjct: 969 DSSTTRKYGGTGLGLVISQRLTQMMGGVLTVTSEPGV----------------GSNFRFC 1012 Query: 562 VNLTVLPSCAYSVHNLRHSLFIGRSVLVADYDEGRGTRMRNLLASWRLQAEQITFSSPAK 621 + T +++ G+ VL+ D +E +++ +W L T A Sbjct: 1013 ILTTAQAPALAEADSVQQ--MKGKQVLIVDDNETNRRILQDQCQAWGLVCHCFTSGESAL 1070 Query: 622 LGEDLKSRLTQKNYGALILHCPYPEG--RGKQFTDFDLGKITTWAPTEQDIPVLVATDIY 679 D +R + L L P +G F GK D+P+++ + Sbjct: 1071 ---DWFARCPDLDAAILDLQMPNMDGITLAHHLRQFAQGK---------DLPIILLSSGL 1118 Query: 680 LSPGERYSGDKPPVQAWIKSPINPDELENTLVDVLG---------QTEPPTLV------S 724 ++ + S + + ++ + D L N +G Q + P V Sbjct: 1119 VAGADELSVFQTVLNKPVRQSLIFDSLVNIFQGSIGLADYAPQFDQLDLPEFVPDGDGLP 1178 Query: 725 TEAISGPLFPYSSSNLTILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDY 784 TE + L P L ILLAEDNL+NQ+VA +L LGYPV + NNGQE + AL K Y Sbjct: 1179 TEDNATSLQP----ALQILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFY 1234 Query: 785 DVVLMDVEMPEMDGLTATEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKP 844 D+VLMD++MP MDG+TA HIR++ +P I+A+TA +M GDR+ CL +GM+ Y+SKP Sbjct: 1235 DLVLMDMQMPVMDGITACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKP 1294 Query: 845 IRXXXXXXXXXXXXXXXXS--TSQDRMATVSCVSAFEAKPSPSSPCPEDPAGTTLPPIDQ 902 I S +D + ++ E + P T P+D Sbjct: 1295 ISINQLRKVLQDTSALITSPQAREDIVTLGDKITVVEEQTMVK------PTDVTESPLDP 1348 Query: 903 DIICSLRDLDRENGQLIL-REIIDIYCQTAPELLQRIKLAIANQDWGNLSSAAHTLGSSS 961 I LRD D G L L E++ YCQ + +L++ + + D+ + AH+L SSS Sbjct: 1349 TAIAFLRD-DLCGGDLTLFGEMVACYCQESQKLIEELVQGLEVDDFAVIRRTAHSLKSSS 1407 Query: 962 ANLGAVLLAQQAKTLE 977 A+LGA L+ + LE Sbjct: 1408 ASLGAQQLSTFCQQLE 1423 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 289 bits (739), Expect = 3e-80 Identities = 230/718 (32%), Positives = 336/718 (46%), Gaps = 94/718 (13%) Query: 288 QSLEMERRMRQQLAEQNQELVXXXXXXXXXNRSKSEFLATMSHEIRTPMNAIIGMXXXXX 347 ++ E E + ++LAE+ +R K++FLA MSHEIRTPMNA+IGM Sbjct: 507 KAAEAEMKRAKELAEE-------------ASRIKADFLANMSHEIRTPMNAVIGMTHLAL 553 Query: 348 XXXXXXQQKYFAQTIRNSGETLLTLINDILDFSKIEAGKLDLEVYPFDLGQCLEEALDVV 407 +Q+ + IR SG+ LL +INDILDFSKIEAGKL +E FDL + L+ ++ Sbjct: 554 KTDLTPRQREYLHKIRFSGQHLLGVINDILDFSKIEAGKLPMESIDFDLDKVLDNVATLI 613 Query: 408 VPSARQKSLTLIRRFLTPIPPNLQGDVTRLRQILVNLLSNAVKFTEAGQVKVTVEVVDHD 467 A K L L+ +P + GD RL QIL+N +NAVKFTE G + + V + ++ Sbjct: 614 SEKATNKGLELLFDIDRNLPRHFIGDPLRLGQILINYANNAVKFTEQGDITIVVRLQEY- 672 Query: 468 AAKGEYQICFAVQDTGIGIAPNQQQALFQAFSQGNSSITRRFGGTGLGLAICVRLTALMG 527 + + AV+DTGIGI P LF +F Q +SS TR FGGTGLGLAIC R+ LMG Sbjct: 673 -RDQDVVLYLAVKDTGIGIKPEHIANLFNSFQQADSSTTRNFGGTGLGLAICKRIAELMG 731 Query: 528 GTIWAESNGCVVGNPPELWQIGQPTIEGSTFYFTVNLTVLPSCAYSVHNLRHSLFI---- 583 G + ES + GQ GSTF+ V C + + H L + Sbjct: 732 GEVGVES------------EYGQ----GSTFWAKV-------CLQKSNVIPHRLVLSKDL 768 Query: 584 -GRSVLVADYDEGRGTRMRNLLASWRLQAEQITFSSPAKLGEDLKSRLTQKNYGALILHC 642 G+ VLV D ++ M++LL + E + S P L ++ + + + Sbjct: 769 EGKRVLVVDDNDHARLVMKDLLEQMKFVVETVE-SGPEALNFLAEADRENHPHSIVFIDW 827 Query: 643 PYPEGRGKQFTDFDLGKITTWAPTEQDIPVLVATDIYLSPGERYSGDKPPVQAWIKSPIN 702 P G + ++ Q P + Y + + PI+ Sbjct: 828 QMPNMDGLEVA----RRLKAMGLNHQ--PSIFIVTAYGREELFVKAKSLGIDDVLVKPIS 881 Query: 703 PDELENTLVDVLGQTEPPTLVSTEAISGPLFPYSSSNL---------TILLAEDNLINQQ 753 P L ++L VLG PT ++ E L ILL EDN INQ+ Sbjct: 882 PSVLFDSLARVLGD---PTALAQEMRQSSGIGAEDLALEKLRRIRGARILLVEDNEINQE 938 Query: 754 VAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTATEHIRRSQGRSE 813 VA LL+ +G+ VDV NG AL L Y +VLMD++MPEMDG+ AT IR++ ++ Sbjct: 939 VAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIEATIAIRQNPRYAQ 998 Query: 814 RPWIIAVTAYSMEGDRERCLASGMNDYVSKPIRXXXXXXXXXXXXXXXXSTSQDRMATVS 873 P I+A+TA M+GDRERCL +GMND++ KPI Sbjct: 999 LP-IVAMTANVMQGDRERCLQAGMNDHLGKPIEPEELWN--------------------- 1036 Query: 874 CVSAFEAKPSPSSPCPEDPAGTTLPPIDQDI-ICSLRDLDRENG-------QLILREIID 925 P S PE + + D +I I + L+ ++G + + +++ Sbjct: 1037 --KLLHWIPVDSPLAPETIEESAINTSDPEISIPHIPGLNSDDGLRRVLGKKSLYLKMLH 1094 Query: 926 IYCQTAPELLQRIKLAIANQDWGNLSSAAHTLGSSSANLGAVLLAQQAKTLENLTRQR 983 + + L I A+ +D+G AHTL + N+GA L Q+A LE +++ Sbjct: 1095 KFVASQSSFLPEITQALGEKDYGFAERLAHTLKGVAGNIGAQELQQEAAELEKAIKEQ 1152 Score = 45.8 bits (107), Expect = 6e-07 Identities = 28/108 (25%), Positives = 50/108 (46%) Query: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQXXXXXXXXXXXXXXXXEV 79 IL+V+D + N V +ELL G++ +G AL+R+ E Sbjct: 927 ILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIEA 986 Query: 80 CDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPEL 127 ++Q+P+ +P++ +TA+ + D + G D++ KP P EL Sbjct: 987 TIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEEL 1034 Score = 42.7 bits (99), Expect = 5e-06 Identities = 39/134 (29%), Positives = 56/134 (41%), Gaps = 8/134 (5%) Query: 6 PHPPIATFEPESFLILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQXXXX 65 PH + + + E +LVVDD V+ +LLE + V SGPEAL + +A Sbjct: 759 PHRLVLSKDLEGKRVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENH 818 Query: 66 XXXXXXX-----XXXXXEVCDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTK 120 EV RLK + +TA ++ ++A + G D + K Sbjct: 819 PHSIVFIDWQMPNMDGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVK 878 Query: 121 PFSPPEL---LARV 131 P SP L LARV Sbjct: 879 PISPSVLFDSLARV 892 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 223 bits (568), Expect = 2e-60 Identities = 173/522 (33%), Positives = 268/522 (51%), Gaps = 68/522 (13%) Query: 253 FERDYVPIMLGDSSQGHFWLYRDISQRKQVEM-IQGQSLEMERRMR---QQLAEQNQELV 308 F+++ +P++ + Q D+++ ++ ++ ++ + ++E+R++ Q+L + L+ Sbjct: 393 FDKNNLPLLSRGTIQ-------DVTELQEAQISLEHLNEKLEQRIQERTQELENSQESLL 445 Query: 309 XXXXXXXXXNRSKSEFLATMSHEIRTPMNAIIGMXXXXXXXXXXXQQKYFAQTIRNSGET 368 ++KSEFLA MSHEIRTPMNAIIGM QQ+ + Q ++ +GE Sbjct: 446 EAKLVAEGATKAKSEFLANMSHEIRTPMNAIIGMSELVLQTDLTSQQRNYLQKVQYAGEL 505 Query: 369 LLTLINDILDFSKIEAGKLDLEVYPFDLGQCLEEALDVVVPSARQKSLTLIRRFLTPIPP 428 LL +IN+ILDFSK+EAGKL+LE PF + + + ++ A K LTL IPP Sbjct: 506 LLGIINNILDFSKMEAGKLELEQKPFSVEEVMGNLHSILGIQAEAKGLTLNFHLDPRIPP 565 Query: 429 NLQGDVTRLRQILVNLLSNAVKFTEAGQVKVTVEVVDHDAAKGEYQICFAVQDTGIGIAP 488 L GD RL QIL+NL +NAVKFT G++ + +++ + + + Q F+V DTGIG+ P Sbjct: 566 ILVGDRLRLSQILINLGNNAVKFTNQGEITIRGQLLKTENEQTKLQ--FSVTDTGIGLTP 623 Query: 489 NQQQALFQAFSQGNSSITRRFGGTGLGLAICVRLTALMGGTIWAESNGCVVGNPPELWQI 548 +QQ LFQ F+QG +S +R++GGTGLGLAI LT LMGG IW ES VVG Sbjct: 624 DQQSKLFQWFNQGETSTSRQYGGTGLGLAISKSLTELMGGDIWLES---VVG-------- 672 Query: 549 GQPTIEGSTFYFTVNL-TVLPSCAYSVHNLRHSL-------------FIGRSVLVADYDE 594 +GSTF+FTV L T P+ A R S+ G S+L+ + +E Sbjct: 673 -----QGSTFHFTVCLGTASPAVAQDYLVSRVSILEAKPSVTQAITQLEGASILLVEDNE 727 Query: 595 GRGTRMRNLLASWRLQAEQITFSSPAKLGEDLKSRLTQKNYGALILHCPYPEGRGKQFTD 654 +LL S L+ + A G++ + LT Y A+++ P G Sbjct: 728 INREFAHDLLTSKGLRVQ------VANNGQEALTLLTSNTYDAILMDIQMPMLNG----- 776 Query: 655 FDLGKITTWAPTEQDIPVLVATDIYLSPGERYSGDKPPVQAWIKSPINPDELENTLVDVL 714 +D + +++P++ T ++ G++ + + PI PD L TL + Sbjct: 777 YDATRAIRQQEYHRNLPIIAMTANAMA-GDQEKALDAGMNDHLTKPIKPDLLFQTLAHWI 835 Query: 715 GQTEPPTLVSTEAISGPLFPYSSSNLTILLAEDNL--INQQV 754 PP S P SSNL L+ ++ INQQ+ Sbjct: 836 ----PPN--SAREKKNP-----SSNLKADLSFSSMTGINQQI 866 Score = 103 bits (257), Expect = 3e-24 Identities = 79/252 (31%), Positives = 125/252 (49%), Gaps = 21/252 (8%) Query: 741 TILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLT 800 +ILL EDN IN++ A LL G V V NNGQEAL+ L YD +LMD++MP ++G Sbjct: 719 SILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYD 778 Query: 801 ATEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKPIRXXXXXXXXXXXXXX 860 AT IR+ + P IIA+TA +M GD+E+ L +GMND+++KPI+ Sbjct: 779 ATRAIRQQEYHRNLP-IIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLF--------- 828 Query: 861 XXSTSQDRMATVSCVSAFEAKPSPSSPCPEDPAGTTLPPIDQDIICSLRDLDRENGQLIL 920 +A ++ K +PSS D + +++ I+Q I EN +L Sbjct: 829 ------QTLAHWIPPNSAREKKNPSSNLKADLSFSSMTGINQQIGMQY----IENVELYH 878 Query: 921 REIIDIYCQTAPELLQRIKLAIANQDWGNLSSAAHTLGSSSANLGAVLLAQQAKTLENLT 980 R ++ + + + A+ D + AH++ ++A LG + A+ LE+ Sbjct: 879 RLLVK-FGDRYSNFADQFRTEQASDDPTAATRYAHSIKGAAALLGIENVHHTAQQLEDSC 937 Query: 981 RQRDSRAMDPGH 992 R+ +S M H Sbjct: 938 REHESPEMIDRH 949 Score = 43.5 bits (101), Expect = 3e-06 Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 1/131 (0%) Query: 4 SQPHPPIATFEPESFLILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQXX 63 ++P A + E IL+V+D + N +LL +G +G EAL +T Sbjct: 704 AKPSVTQAITQLEGASILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYD 763 Query: 64 XXXXXXXXXXXXXXEVCDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFS 123 + ++Q R++P+I +TA+ D +A G D++TKP Sbjct: 764 AILMDIQMPMLNGYDATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIK 823 Query: 124 PPELLARVKTH 134 P+LL + H Sbjct: 824 -PDLLFQTLAH 833 >SYNE-PCC-01-000891 sll1353 Length = 998 Score = 169 bits (427), Expect = 5e-44 Identities = 120/328 (36%), Positives = 173/328 (52%), Gaps = 32/328 (9%) Query: 208 KNLTAIAPR--INGLISHGQGVTHNFLAIESPEPLLKVELALEDGRFFERDYVPIMLGDS 265 + LT IA R ++ +I+ + + +++ ++K + R ER + I++ Sbjct: 512 QGLTPIALRSEVSEVITLNENFNEMLITLQNQFKIIKQAKDNLEMRVAERTHTLIVINKQ 571 Query: 266 SQGHFWLYRDISQRKQVEMIQGQSLEMERRMRQQLAEQNQELVXXXXXXXXXNRSKSEFL 325 G +I +R+++E+ ++R+ A+++ EL NR KSEFL Sbjct: 572 LAG------EIEERQRIEI----------KLRE--AKESAELA---------NRVKSEFL 604 Query: 326 ATMSHEIRTPMNAIIGM-XXXXXXXXXXXQQKYFAQTIRNSGETLLTLINDILDFSKIEA 384 A +SHEIRTPMNAI+G Q K + I +S + LL LI+DILD SKIEA Sbjct: 605 ANISHEIRTPMNAILGFCDLLLQKDLSLSQTKKYLNAIGSSSKILLALIDDILDISKIEA 664 Query: 385 GKLDLEVYPFDLGQCLEEALDVVVPSARQKSLTLIRRFLTPIPPNLQGDVTRLRQILVNL 444 GKL + + P DL + E + A KSL L + + + D RLRQIL NL Sbjct: 665 GKLVIHLEPVDLRVIIREIKQIFDYKAESKSLLLTIQIDETLNQAIYFDAVRLRQILFNL 724 Query: 445 LSNAVKFTEAGQVKVTVEVVDHDA-AKGEY-QICFAVQDTGIGIAPNQQQALFQAFSQGN 502 + NA+KFTE GQV + + V ++G Y + V DTGIGIAP Q +F F+Q Sbjct: 725 VGNALKFTEEGQVFIYIGVEGIQVRSQGTYISLAIEVTDTGIGIAPEDQAKIFDVFTQSQ 784 Query: 503 SSITRRFGGTGLGLAICVRLTALMGGTI 530 TR++GGTGLGL I RLTAL+GG I Sbjct: 785 GQSTRKYGGTGLGLTITRRLTALLGGEI 812 >SYNE-PCC-01-001280 sll1871 Length = 674 Score = 154 bits (388), Expect = 2e-39 Identities = 97/259 (37%), Positives = 140/259 (54%), Gaps = 7/259 (2%) Query: 279 RKQVEMIQGQSLEMERRMRQQLAEQNQELVXXXXXXXXXNRSKSEFLATMSHEIRTPMNA 338 +KQ+ + E ++ ++L + L N +KS FLA MSHE+RTP+NA Sbjct: 396 QKQLAVANSCLEEKVQQRTEELENTVKALELASSEAEAANATKSIFLANMSHELRTPLNA 455 Query: 339 IIGMXXXXXXXXXXXQQKYFA---QTIRNSGETLLTLINDILDFSKIEAGKLDLEVYPFD 395 IIG + I SG++LL LIND+LD SKIEAGK++L + F+ Sbjct: 456 IIGYSEMLIEEAEDLDSEELVPDLDKILRSGKSLLALINDLLDISKIEAGKMELYLETFN 515 Query: 396 LGQCLEEALDVVVPSARQKSLTLIRRFLTPIPPNLQGDVTRLRQILVNLLSNAVKFTEAG 455 L + + LD + P + + L ++ + GD+ +LRQ ++NLLSNA KFT+ G Sbjct: 516 LKELIAGILDTISPLLKNNNNKLEVE-ISLESEEVYGDLIKLRQGILNLLSNASKFTKDG 574 Query: 456 QVKVTVEVVDHDAAKGEYQICFAVQDTGIGIAPNQQQALFQAFSQGNSSITRRFGGTGLG 515 + VE D + F V+DTGIG+ Q LFQ F+Q +SS TR++GGTGLG Sbjct: 575 IISFIVEEFKVDEKDW---LSFQVKDTGIGLTEEQMSKLFQPFTQADSSTTRKYGGTGLG 631 Query: 516 LAICVRLTALMGGTIWAES 534 LAI + +MGG I+ S Sbjct: 632 LAITRKFCQMMGGDIYLTS 650 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 152 bits (385), Expect = 4e-39 Identities = 108/274 (39%), Positives = 155/274 (56%), Gaps = 21/274 (7%) Query: 276 ISQRKQVEMIQGQSLEMERRMRQQ-LAEQNQ------ELVXXXXXXXXXNRSKSEFLATM 328 I Q ++++ + Q E+ER R++ L E N+ +LV ++KS F+A M Sbjct: 314 IEQNQKLQELY-QQRELERAQREKILIEYNESLQKQVDLVRAKEIAESEAKAKSTFVANM 372 Query: 329 SHEIRTPMNAIIGMXXXXXXXXXXXQQKYF-AQTIRNSGETLLTLINDILDFSKIEAGKL 387 SHE+R+P+NAIIG ++Y A I+ SGE LL LIN+ILDFSKIEAGK Sbjct: 373 SHELRSPLNAIIGFSQLMLRTKNLPMEQYENAGIIQRSGEYLLNLINNILDFSKIEAGKT 432 Query: 388 DLEVYPFDLGQCLEEALDVVVPSARQKSLTLIRRFLTPIPPNLQGDVTRLRQILVNLLSN 447 L + FDL L++ D++ A + + LI +P + GD +LRQIL+NLLSN Sbjct: 433 HLNRHNFDLYLLLDDLEDMLHLKAANEGIELIFIRDHDLPRYVYGDEIKLRQILLNLLSN 492 Query: 448 AVKFTEAGQVKVT--------VEVVDHDAA---KGEYQICFAVQDTGIGIAPNQQQALFQ 496 A+KFT G+V +T EV++ + + K +Y + F ++DTG GI+ + LF+ Sbjct: 493 AIKFTTEGEVVLTSNFRNAEQQEVINPETSTEPKNKYWLDFTIKDTGKGISEVELSHLFE 552 Query: 497 AFSQGNSSITRRFGGTGLGLAICVRLTALMGGTI 530 AFSQ S + GTGLGLAI + LMGG I Sbjct: 553 AFSQTESGRNAQ-EGTGLGLAITRQFIKLMGGDI 585 Score = 69.3 bits (168), Expect = 5e-14 Identities = 34/105 (32%), Positives = 64/105 (60%), Gaps = 1/105 (0%) Query: 742 ILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTA 801 IL+ +D +N+Q+ LL G+ ++ +NGQEA++ + ++ MD+ MP MDG A Sbjct: 632 ILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYEA 691 Query: 802 TEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKPIR 846 T++I + Q + ++A+TA +E ++ L++G +D++ KP R Sbjct: 692 TKYI-KGQVKGNATAVVALTASVLEEEKAIVLSAGCDDFLRKPFR 735 >SYNE-PCC-01-000295 sll0474 Length = 806 Score = 150 bits (379), Expect = 2e-38 Identities = 89/243 (36%), Positives = 138/243 (56%), Gaps = 8/243 (3%) Query: 299 QLAEQNQELVXXXXXXXXXNRSKSEFLATMSHEIRTPMNAIIGMXXXXXXXXXX---XQQ 355 ++ + ++L + K EFLA MSHE+RTP+N+I+GM +Q Sbjct: 396 EIKKAEEQLKLSNKILAKATQLKDEFLANMSHELRTPLNSILGMIETLQNQVYGPLNGKQ 455 Query: 356 KYFAQTIRNSGETLLTLINDILDFSKIEAGKLDLEVYPFDLGQCLEEALDVVVPSARQKS 415 + + NSG LL+LINDILD SKIEAG++DL++ P + + +L V A QK Sbjct: 456 VQSLEIVENSGRHLLSLINDILDLSKIEAGRMDLDLNPTSVSALVNHSLTFVQQFAIQKQ 515 Query: 416 LTLIRRFLTPIPPNLQGDVTRLRQILVNLLSNAVKFT-EAGQVKVTVEVVDHDAAKGEY- 473 + L + P P++ D RL Q+L+NLL+NA+KFT E G+V V +++ + Sbjct: 516 INLSSEII-PNLPDVLVDKRRLCQVLINLLNNAIKFTPEGGKVVVQADLIKEQGKENSQS 574 Query: 474 --QICFAVQDTGIGIAPNQQQALFQAFSQGNSSITRRFGGTGLGLAICVRLTALMGGTIW 531 Q+ F V DTGIGI ++ +F+ F Q +S++ RR+ GTGLGL++ ++ L GG++ Sbjct: 575 PPQLSFTVFDTGIGIEADRLNNIFEPFVQIDSALNRRYDGTGLGLSLVKKIVELHGGSVT 634 Query: 532 AES 534 S Sbjct: 635 VTS 637 >SYNE-PCC-01-001294 sll1888 Length = 432 Score = 141 bits (355), Expect = 1e-35 Identities = 105/326 (32%), Positives = 154/326 (47%), Gaps = 38/326 (11%) Query: 259 PIMLGDSSQGHFWLYRDISQRKQVEMIQGQSLEMERRMRQQLAEQN----------QELV 308 P + D + G+ L +QV G + Q+LAEQ QEL Sbjct: 129 PTLYQDQANGYLCL-------QQVGPAPGPWHPETEALLQELAEQTGTAIAHATLYQELT 181 Query: 309 XXXXXXXXXNRSKSEFLATMSHEIRTPMNAIIGMXXXXXX--XXXXXQQKYFAQTIRNSG 366 +R KSEFLA+ +HE+RTP+N IIG ++ F + S Sbjct: 182 QATKAAEEASRLKSEFLASTTHELRTPLNGIIGFLRLILDDMADSEAEKHEFVEEAYQSA 241 Query: 367 ETLLTLINDILDFSKIEAGKLDLEVYPFDLGQCLEEALDVVVPSARQKSLTLIRRFLTPI 426 LL LINDILD +KIEAG++ +E+ D + L+ + +P A+ K L+ Sbjct: 242 LLLLNLINDILDLAKIEAGRVGIELEVVDFSEVLQATENFALPQAQNKGLSFNLTAPNQG 301 Query: 427 PPNLQGDVTRLRQILVNLLSNAVKFTEAGQVKVTVEVVDHDAAKGEYQ----ICFAVQDT 482 P + G+ L Q+++N++ NA+KFT G + V VEV+ Q + +V DT Sbjct: 302 PLLVYGNQRWLLQVMLNIVGNAIKFTHEGGITVAVEVMPRTVLWEGVQKPGLLKVSVGDT 361 Query: 483 GIGIAPNQQQALFQAFSQGNSSITRRFGGTGLGLAICVRLTALMGGTIWAESNGCVVGNP 542 GIG++ QQ LF+ F Q + S ++ +GGTGLGL I +L MGG + Sbjct: 362 GIGVSLEQQSKLFKKFVQIDGSHSKAYGGTGLGLVISQKLVETMGGKV------------ 409 Query: 543 PELWQIGQPTIEGSTFYFTVNLTVLP 568 + +G+ GST FTV L LP Sbjct: 410 -AFFSMGEGL--GSTVTFTVLLEELP 432 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 136 bits (342), Expect = 4e-34 Identities = 133/460 (28%), Positives = 207/460 (45%), Gaps = 54/460 (11%) Query: 318 NRSKSEFLATMSHEIRTPMNAIIGMXXXXXXXXXXXQQKYFAQTIRNSGETLLTLINDIL 377 NR+K+EFLA++SHE+RTP+NAIIG + I SGE LL LINDIL Sbjct: 160 NRAKTEFLASISHELRTPLNAIIGFSQLLHRDPSLAPHRPTLDIINRSGEHLLELINDIL 219 Query: 378 DFSKIEAGKLDLEVYPFDLGQCLEEALDVVVPSARQKSLTLIRRFLTPIPPNLQGDVTRL 437 + SKIEAG+ L D + L+ + A++K L L +P ++ D +L Sbjct: 220 EMSKIEAGRTTLNEKIIDCHRLLDNLQALFQLRAQEKQLLLKVERSPEVPEWIKTDGGKL 279 Query: 438 RQILVNLLSNAVKFTEAGQVKVTVEVV---DHDAAKG-EYQICFAVQDTGIGIAPNQQQA 493 RQ+L+NLL+NA+KFT G V + V+ + D +G + F V DTG GIA ++ Sbjct: 280 RQVLINLLANAIKFTAQGGVTLKVKCLTAPQTDEGQGASIWLHFLVSDTGPGIAAHEMDE 339 Query: 494 LFQAFSQGNSSITRRFGGTGLGLAICVRLTALMGGTIWAESNGCVVGNPPELWQIGQPTI 553 LF F+Q + + + G GLGL I + LMGG I Q+ Sbjct: 340 LFVPFAQTETGL-KSCQGNGLGLPISQKFVQLMGGQI----------------QVRSKVD 382 Query: 554 EGSTFYFTVNLTVL----PSCAYSVHNLRHSLFIGRSVLVADYDEGRGTRMRNLLASWRL 609 +GS F+F + + V+ P+ S L + VLV D +R LL S Sbjct: 383 QGSAFFFAIPVQVMAAPKPTPETSAVTLPPLDQYNQKVLVVDDRPESRLLLRQLLTSLGF 442 Query: 610 QAEQITFSSPAKLGEDLKSRLTQKNYGALILHCPYPEGRGKQFTDFDLGKITTWAPTEQD 669 ++ A+ GE + + +++ P G+ T KI A + Sbjct: 443 VVQE------AENGEMAIALWESWHPQVILMDMQMPVLDGRSTTQ----KIK--ASPQGQ 490 Query: 670 IPVLVATDIYLSPGERYSGDKPPVQAWIKSPINPDEL-----ENTLVDVLGQTEPPTLVS 724 +++A GER ++ P P+EL ++ V + Q +PP Sbjct: 491 HTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIALLAKHLAVALPSQGQPP---- 546 Query: 725 TEAISGPLFPY---SSSNLTILLAE-DNLINQQVAKLLLK 760 + PL P+ ++ +L+ LA+ Q++AK+ L+ Sbjct: 547 ----ASPLRPFPVITAPSLSEQLAKTPQSWRQKMAKMALE 582 Score = 74.7 bits (182), Expect = 1e-15 Identities = 45/153 (29%), Positives = 80/153 (52%), Gaps = 3/153 (1%) Query: 694 QAWIKSPINPDELENTLVDVLGQTEPPTLVSTEAISGPLFPYSSSNLTILLAEDNLINQQ 753 Q ++S ++ + V P T A++ P P N +L+ +D ++ Sbjct: 374 QIQVRSKVDQGSAFFFAIPVQVMAAPKPTPETSAVTLP--PLDQYNQKVLVVDDRPESRL 431 Query: 754 VAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTATEHIRRSQGRSE 813 + + LL LG+ V NG+ A++ V+LMD++MP +DG + T+ I+ S + + Sbjct: 432 LLRQLLTSLGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRSTTQKIKASP-QGQ 490 Query: 814 RPWIIAVTAYSMEGDRERCLASGMNDYVSKPIR 846 IIA+TA + EG+R L++G +D++SKP R Sbjct: 491 HTIIIALTASAFEGERAEILSAGCDDFLSKPFR 523 Score = 46.6 bits (109), Expect = 4e-07 Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 3/128 (2%) Query: 8 PPIATFEPESFLILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQXXXXXX 67 PP+ + + +LVVDD E+ ++ +LL G+ +G A+ Sbjct: 411 PPLDQYNQK---VLVVDDRPESRLLLRQLLTSLGFVVQEAENGEMAIALWESWHPQVILM 467 Query: 68 XXXXXXXXXXEVCDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPEL 127 ++K PQ + +I LTAS + + + + G D+++KPF P EL Sbjct: 468 DMQMPVLDGRSTTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEEL 527 Query: 128 LARVKTHL 135 +A + HL Sbjct: 528 IALLAKHL 535 >SYNE-PCC-01-002778 slr1969 Length = 750 Score = 108 bits (270), Expect = 8e-26 Identities = 81/259 (31%), Positives = 125/259 (48%), Gaps = 19/259 (7%) Query: 285 IQGQSLEMERRMRQQLAEQNQELVXXXXXXXXXNRSKSEFLATMSHEIRTPMNAIIGMXX 344 +Q Q E+R+ E+ +EL N KS+F+ +SHE+RTP+ +IIG+ Sbjct: 347 VQKQKNNFEKRV----IERTKELRDTLMAAQAANLLKSQFINNISHELRTPLTSIIGLSA 402 Query: 345 XXX------XXXXXXQQKYFAQTIRNSGETLLTLINDILDFSKIEAGKLDLEVYPFDLGQ 398 +Q+Y+ I+ +G+ LL IN I+ S++E+G+ L F L Sbjct: 403 TLLRWFDHPASLPPAKQQYYLLNIQENGKKLLDQINSIIQLSQLESGQTALNCQSFSLHT 462 Query: 399 CLEEALDVVVPSARQKSLTLIRRFLTPIPPN-LQGDVTRLRQILVNLLSNAVKFTEA-GQ 456 + + ++ A ++ + L + + + D RL QIL LL+NA+KFT A G Sbjct: 463 LAQTVIHSLLGVAIKQQINLELDYQINVGQDQFCADQERLDQILTQLLNNALKFTPAEGT 522 Query: 457 VKVTVEVVDHDAAKGEYQICFAVQDTGIGIAPNQQQALFQAFSQGNSSITRRFGGTGLGL 516 V + + K Q F V+DTGIGI Q LF+AF S T + G+GL Sbjct: 523 VILRIW-------KESNQAIFQVEDTGIGINEQQLPVLFEAFKVAGDSYTSFYETGGVGL 575 Query: 517 AICVRLTALMGGTIWAESN 535 A+ +L L GG I ES+ Sbjct: 576 ALTKQLVELHGGYIEVESS 594 >SYNE-PCC-01-001509 slr0210 Length = 417 Score = 107 bits (267), Expect = 2e-25 Identities = 79/209 (37%), Positives = 104/209 (49%), Gaps = 11/209 (5%) Query: 325 LATMSHEIRTPMNAIIG---MXXXXXXXXXXXQQKYFAQTIRNSGETLLTLINDILDFSK 381 L+ + HE RTP+ AIIG M +Q + Q NS E LL+L+ND LD SK Sbjct: 190 LSHIHHEFRTPLTAIIGFARMLRDELYGKLNPKQHQYVQGTLNSAEHLLSLVNDFLDLSK 249 Query: 382 IEAGKLDLEVYPFDLGQCLEEALDVVVPSARQKSLTLIRRFLTPIPPNLQGDVTRLRQIL 441 I+A +L + + +V A++K L L + D R +QIL Sbjct: 250 IDARCEELFYEQVAVEDLCLAVISMVQTKAKEKQLALNLTIDDGVD-FCYVDQRRWKQIL 308 Query: 442 VNLLSNAVKFTEAGQVKVTVEVVDHDAAKGEYQICFAVQDTGIGIAPNQQQALFQAFSQG 501 +NLLSN VKFT G V + V+ D + F+V DTGIGI P Q+ LFQ F Q Sbjct: 309 INLLSNGVKFTPKGSVTLAVKATDK-------ALIFSVIDTGIGIDPEDQRDLFQPFKQI 361 Query: 502 NSSITRRFGGTGLGLAICVRLTALMGGTI 530 + + GTGLGLA+ RL L GG I Sbjct: 362 SHPPSFAEKGTGLGLALSRRLAQLHGGDI 390 >SYNE-PCC-01-001517 slr0222 Length = 1178 Score = 104 bits (259), Expect = 2e-24 Identities = 70/216 (32%), Positives = 111/216 (51%), Gaps = 12/216 (5%) Query: 318 NRSKSEFLATMSHEIRTPMNAIIG---MXXXXXXXXXXXQQKYFAQTIRNSGETLLTLIN 374 N +KS+F+ +SHE RTP+ +IIG + +++ + I+NS + L LI+ Sbjct: 937 NEAKSQFVDIVSHEFRTPLTSIIGFGELLSKYFDRLSTEKKQQYINNIQNSSQRLKQLID 996 Query: 375 DILDFSKIEAGKLDLEVYPFDLGQCLEEALDVVVPSARQKSLTLIRRFLTPIPPNLQGDV 434 D+L S+ +A K+++E+ +L + ++ + + L P +L DV Sbjct: 997 DVLSISRYDANKIEIELGNINLRNLANDLIENFSCGLGSEHNFELNYHLKPDEHSLV-DV 1055 Query: 435 TRLRQILVNLLSNAVKFTEAGQVKVTVEVVDHDAAKGEYQICFAVQDTGIGIAPNQQQAL 494 LR IL N+LSNA+K++ G + D +K E + F V+D GIGI Q+ L Sbjct: 1056 RLLRHILENILSNAIKYSAPGST------ITLDISKDEEHLLFQVRDEGIGIPLQDQEKL 1109 Query: 495 FQAFSQGNSSITRRFGGTGLGLAICVRLTALMGGTI 530 F+AF + +S GTGLGL+I R GGTI Sbjct: 1110 FEAFHR--ASNVGDIPGTGLGLSIVKRYVEFQGGTI 1143 Score = 43.5 bits (101), Expect = 3e-06 Identities = 41/187 (21%), Positives = 76/187 (40%), Gaps = 13/187 (6%) Query: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQXXXXXXXXXXXXXXXXEV 79 +L+VDD +EN+ +S L+ SG EA+ + Sbjct: 9 VLLVDDQRENLVALSRALDSLPVEIITANSGQEAIATAATTEFALMILAQEMSELDGLNT 68 Query: 80 CDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAK----GAVDYVTKPFSPPELLARVKTHL 135 L+ P P+IFL ++ + +A A+ G VD++ +P + L + K +L Sbjct: 69 AKILRSFPLAEQTPIIFLA---RQEIITKAMAEINILGLVDFLAQPPNQNFLQVKAKLYL 125 Query: 136 ELKQTRDNL--HHTLLEQARTA---EALACTSTRLG-ILVQNMQAGVLMTDAQGTIVVVN 189 +L Q + L ++ LE + + + S +L I++ N+ V +TD G + Sbjct: 126 QLFQQKQTLQYYNNYLESSVKSVHFDVKNNHSEQLSEIILANISDTVFVTDLSGKFTFIC 185 Query: 190 PEFARLF 196 +F Sbjct: 186 SNIDNIF 192 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 91.7 bits (226), Expect = 1e-20 Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 44/287 (15%) Query: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQXXXXXXXXXXXXXXXXEV 79 IL+VDD+ N+ ++S+LL GY+ VTSG AL+ + + +V Sbjct: 11 ILLVDDLPNNLQLLSDLLINLGYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQV 70 Query: 80 CDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVKTHLELKQ 139 C+ +K++ + +DIP+IF++A + D ++AF G VDY+TKPF E++AR++ +++ Sbjct: 71 CEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQIEEVVARIEGQFTIQR 130 Query: 140 TRDNLHHTLLEQARTAEALACTSTRLGILVQNMQAGVLMTDA-----QGTI-----VVVN 189 R L + ++ E L + L ++ + G+ A G I +V+N Sbjct: 131 QRIALKREVRKRREAEEVLYQSRALLSSVLNSALDGIAAMQAVRNPQTGDIEDFRCLVIN 190 Query: 190 PEFARLFNLGFPADLLLGKNLTAIAPRINGLISHGQGVTHNFLAIESPEPLLKVELALED 249 P ++ FN DL+ G+ + FL P+ + +E Sbjct: 191 PILSKAFNRS-REDLI------------------GRVLLKRFLQRLDPQLFDQFVNLVET 231 Query: 250 GRFFERD------------YVPIMLGDSSQGHFWLYRDISQRKQVEM 284 G F +D +V + LGD G RDI+ RK++E+ Sbjct: 232 GTFLTQDIYFPIANSDWYHFVAVKLGD---GFAVTVRDITDRKRMEL 275 Score = 61.2 bits (147), Expect = 1e-11 Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 1/105 (0%) Query: 742 ILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTA 801 ILL +D N Q+ LL LGY V V +G+ AL L D++L+D++MP+MDG Sbjct: 11 ILLVDDLPNNLQLLSDLLINLGYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQV 70 Query: 802 TEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKPIR 846 E I++ + + P II ++A D+ + G DY++KP + Sbjct: 71 CEMIKKEEELQDIP-IIFISALGDTFDKVKAFECGGVDYITKPFQ 114 >SYNE-PCC-01-000985 sll1475 Length = 297 Score = 86.7 bits (213), Expect = 3e-19 Identities = 70/266 (26%), Positives = 122/266 (45%), Gaps = 38/266 (14%) Query: 274 RDISQRKQVEMIQGQSLEMERRMRQQLAEQNQELVXXXXXXXXXNRSKSEFLATMSHEIR 333 RD+++R++ E ++ +LE E+ + +R K+ F + SHE R Sbjct: 44 RDVTERRRTEEVR-LALEREKEL---------------------SRLKTRFFSMASHEFR 81 Query: 334 TPMNAIIGMXXXXXXXXXX----XQQKYFAQTIRNSGETLLTLINDILDFSKIEAGKLDL 389 TP++ + ++ I+NS + ++ L++DIL ++ EAGKL+ Sbjct: 82 TPLSTALAAAQLLENSEVAWLDPDKRSRNLHRIQNSVKNMVQLLDDILIINRAEAGKLEF 141 Query: 390 EVYPFDLGQCLEEALDVVVPSARQKSLTLIRRFLTPIPPNLQGDVTRLRQILVNLLSNAV 449 DL ++ ++ + S + + D +R IL NLLSNA+ Sbjct: 142 NPNWLDLKLLFQQFIEEIQLSVSDQYY--FDFICSAQDTKALVDERLVRSILSNLLSNAI 199 Query: 450 KFTEAG-QVKVTVEVVDHDAAKGEYQICFAVQDTGIGIAPNQQQALFQAFSQGNSSITRR 508 K++ G Q+K+ + + QI F V D GIGI+P Q+ +F+ F +G + R Sbjct: 200 KYSPGGGQIKIALSLDSE-------QIIFEVTDQGIGISPEDQKQIFEPFHRGKN--VRN 250 Query: 509 FGGTGLGLAICVRLTALMGGTIWAES 534 GTGLGL + + L G+I +S Sbjct: 251 ITGTGLGLMVAKKCVDLHSGSILLKS 276 >SYNE-PCC-01-001690 slr0473 Length = 748 Score = 85.5 bits (210), Expect = 7e-19 Identities = 81/340 (23%), Positives = 141/340 (41%), Gaps = 35/340 (10%) Query: 229 HNFLAIESPEPLLKVELALEDGRFFERDYVPIMLGDSSQGHFWLYRDISQRKQV--EMIQ 286 HNFL PE L V + +E + + F L+++I + + + + ++ Sbjct: 434 HNFLLWFRPEVLQTVNWGGDPNHAYEATQEDGKIELHPRQSFDLWKEIVRLQSLPWQSVE 493 Query: 287 GQS-LEMERRMRQQLAEQNQELVXXXXXXXXXNRSKSEFLATMSHEIRTPMNAI---IGM 342 QS L +++ + + Q +EL N +F SH+++ P+N + + + Sbjct: 494 IQSALALKKAIVNLILRQAEELAQLARNLERSNADLKKFAYIASHDLQEPLNQVSNYVQL 553 Query: 343 XXXXXXXXXXXQQKYFAQTIRNSGETLLTLINDILDFSKIEAGKLDLEVYPFDLGQCLEE 402 K F + TLI+DIL ++K++ L ++E Sbjct: 554 LEMRYSEALDEDAKDFIDFAVTGVSLMQTLIDDILTYAKVDTQYAQLTFTD------VQE 607 Query: 403 ALDVVVPSARQKSLTLIRRFLTPIPPNLQGDVTRLRQILVNLLSNAVKFTEAGQVKVTVE 462 +D + + +Q+ P + D +L Q+ NL++N +KF K+ + Sbjct: 608 VVDKALANLKQRIEESGAEIEVGSMPAVMADQIQLMQVFQNLIANGIKFAGDKSPKIKIW 667 Query: 463 VVDHDAAKGEYQICFAVQDTGIGIAPNQQQALFQAFSQGNSSITRRFGGTGLGLAICVRL 522 + E FAVQD GIGI P + +F F + ++ + GTG+GLAIC ++ Sbjct: 668 -----GDRQEDAWVFAVQDNGIGIDPQFFERIFVIFQRLHTR--DEYKGTGMGLAICKKI 720 Query: 523 TALMGGTIWAESNGCVVGNPPELWQIGQPTIEGSTFYFTV 562 G IW ESN EGSTFYF++ Sbjct: 721 IEGHQGQIWLESN----------------PGEGSTFYFSI 744 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 76.3 bits (186), Expect = 4e-16 Identities = 40/104 (38%), Positives = 66/104 (63%), Gaps = 1/104 (0%) Query: 742 ILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTA 801 +LL EDN +N+ + L + GY V + +G++A++ ++LMD+ +P +DG TA Sbjct: 7 VLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGWTA 66 Query: 802 TEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKPI 845 T+ I+ + P IIA+TA++M DRER +A+G +DY +KPI Sbjct: 67 TKQIKGHPDGAHIP-IIALTAHAMASDRERAIAAGCDDYDTKPI 109 Score = 42.4 bits (98), Expect = 7e-06 Identities = 29/113 (25%), Positives = 45/113 (39%) Query: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQXXXXXXXXXXXXXXXXEV 79 +L+V+D + N ++S L +GY G +A+ Sbjct: 7 VLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGWTA 66 Query: 80 CDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVK 132 ++K P IP+I LTA D +A A G DY TKP LL +++ Sbjct: 67 TKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKME 119 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 71.6 bits (174), Expect = 1e-14 Identities = 43/116 (37%), Positives = 57/116 (49%) Query: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQXXXXXXXXXXXXXXXXEV 79 IL++DD ++S LE GY G + Q Q V Sbjct: 4 ILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFTV 63 Query: 80 CDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVKTHL 135 C RL++D +T DIPV+ LTA + QD +Q F GA DY+TKPF E+LARV+ L Sbjct: 64 CQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALL 119 Score = 51.2 bits (121), Expect = 2e-08 Identities = 26/103 (25%), Positives = 57/103 (55%), Gaps = 1/103 (0%) Query: 742 ILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTA 801 IL+ +D+ + + L+ GY V +G + + + D++++D+ +P++DG T Sbjct: 4 ILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFTV 63 Query: 802 TEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKP 844 + +RR + ++ P ++ +TA D+ + SG +DY++KP Sbjct: 64 CQRLRRDERTADIP-VLMLTALGQIQDKIQGFDSGADDYLTKP 105 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 69.3 bits (168), Expect = 5e-14 Identities = 35/113 (30%), Positives = 57/113 (50%) Query: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQXXXXXXXXXXXXXXXXEV 79 +L+V+D +IS +L+ G+ T G EAL+++ EV Sbjct: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 Query: 80 CDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVK 132 C R+K DP+T+++PVI ++ E+ D +GA Y+ KPF P EL+ +K Sbjct: 90 CRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIK 142 Score = 51.2 bits (121), Expect = 2e-08 Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 1/105 (0%) Query: 742 ILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTA 801 +LL ED+ +++ +LK G+ V + +G EAL L D+V++D+ MP M+G Sbjct: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 Query: 802 TEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKPIR 846 I +S +++ +I ++ E DR + G + Y++KP + Sbjct: 90 CRRI-KSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQ 133 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 67.4 bits (163), Expect = 2e-13 Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 2/117 (1%) Query: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQXXXXXXXXXXX-XXXXXE 78 IL+V+D +E +I E LE E + T VT+ E R+ Q Q E Sbjct: 14 ILIVEDDQEIAQLIRETLEREQF-TCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLE 72 Query: 79 VCDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVKTHL 135 VC R++Q P ++D ++ LTA E+ D + + GA DY+ KPFSP EL+ARV+ L Sbjct: 73 VCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRALL 129 Score = 57.0 bits (136), Expect = 3e-10 Identities = 33/103 (32%), Positives = 60/103 (58%), Gaps = 1/103 (0%) Query: 742 ILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTA 801 IL+ ED+ Q+ + L++ + V N+G+ L + D++++D+ +P++DGL Sbjct: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLEV 73 Query: 802 TEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKP 844 IR+ G S+ P+I+ +TA E DR L++G +DY+ KP Sbjct: 74 CTRIRQQPG-SKDPYILMLTAKGEEIDRIIGLSTGADDYLVKP 115 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 63.2 bits (152), Expect = 4e-12 Identities = 34/112 (30%), Positives = 62/112 (55%), Gaps = 1/112 (0%) Query: 734 PYSSSNLTILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEM 793 P ++ IL+ +D+ + ++ L+K G+ V++ NG+EAL+ A+ +VVL+D M Sbjct: 6 PIETAAAKILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVM 65 Query: 794 PEMDGLTATEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKPI 845 P MDG + + + ++ P ++ +T E +R +G DYV+KPI Sbjct: 66 PVMDGFACCQALMKIY-QNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPI 116 Score = 48.1 bits (113), Expect = 1e-07 Identities = 40/140 (28%), Positives = 59/140 (42%), Gaps = 4/140 (2%) Query: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQXXXXXXXXXXXXXXXXEV 79 ILVVDD + L+ EG+ T+G EAL + + + Sbjct: 14 ILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGFAC 73 Query: 80 CDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVKTHLELKQ 139 C L + Q V+ +T +++ + +AF GA+DYVTKP L RVK L Sbjct: 74 CQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLL---- 129 Query: 140 TRDNLHHTLLEQARTAEALA 159 ++ L H L + E LA Sbjct: 130 YQNRLQHQLESVNQMLERLA 149 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 62.8 bits (151), Expect = 5e-12 Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 1/143 (0%) Query: 16 ESFLILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQXXXXXXXXXXXXXX 75 E++ +L+VDD + ++ + LE +GY T +G EAL +T Sbjct: 6 ENYHLLLVDDDPNLLLLVKDYLEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMD 65 Query: 76 XXEVCDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVKTHL 135 ++++Q+P IPV+FL+A + + ++ GA Y+ KPF P EL A+V++ L Sbjct: 66 GYAFIEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCL 125 Query: 136 -ELKQTRDNLHHTLLEQARTAEA 157 + + + +H L + AR A Sbjct: 126 RQADRLLQHNNHPLEDNARVQVA 148 Score = 55.1 bits (131), Expect = 1e-09 Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 1/109 (0%) Query: 736 SSSNLTILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPE 795 S N +LL +D+ + K L+ GY V NG+EAL L D+++ D+ MPE Sbjct: 4 SKENYHLLLVDDDPNLLLLVKDYLEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPE 63 Query: 796 MDGLTATEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKP 844 MDG E +R++ S P ++ ++A +R + L G + Y++KP Sbjct: 64 MDGYAFIEQVRQNPDISWIP-VMFLSAKGQSHNRVKGLNVGADIYMAKP 111 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 60.1 bits (144), Expect = 3e-11 Identities = 33/103 (32%), Positives = 62/103 (60%), Gaps = 4/103 (3%) Query: 742 ILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTA 801 +L+ +DNLI + ++ L KLG+ VD +G+ ++AL YD V++D+ +P++DGL Sbjct: 4 LLIEDDNLIGNGL-QIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGL-- 60 Query: 802 TEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKP 844 E +++ + + ++ +TA +R + L SG +DY+ KP Sbjct: 61 -EVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKP 102 Score = 50.1 bits (118), Expect = 3e-08 Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 5/112 (4%) Query: 41 GYSTTFVTSGPEALQRVTQAQXXXXXXXXXXXXXXXXEVCDRLKQDPQTRDIPVIFLTAS 100 G++ + T G + +T A EV + + + Q D+PV+ LTA Sbjct: 24 GFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLEVLQQWRSNHQ--DVPVLILTAR 81 Query: 101 NEKQDLLQAFAKGAVDYVTKPFSPPELLARVKTHLELKQTRDNLHHTLLEQA 152 + + ++ GA DY+ KPF+ E+ AR++ L + R HH+++EQA Sbjct: 82 DTLDERVKGLQSGADDYLCKPFALAEVAARLQA---LIRRRYGYHHSVIEQA 130 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 56.2 bits (134), Expect = 5e-10 Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 4/101 (3%) Query: 744 LAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTATE 803 + +D +++ + L +GY V +G+EA++ + D D+V++DV MP++DG + Sbjct: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 Query: 804 HIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKP 844 +R+ S+ P II +TA DR L G +DYV KP Sbjct: 61 ELRK---ESDIP-IIMLTALGDVADRITGLELGADDYVVKP 97 Score = 53.9 bits (128), Expect = 2e-09 Identities = 35/114 (30%), Positives = 50/114 (43%), Gaps = 3/114 (2%) Query: 22 VVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQXXXXXXXXXXXXXXXXEVCD 81 +VDD ++ L GY G EA+ ++ VC Sbjct: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 Query: 82 RLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVKTHL 135 L+++ DIP+I LTA + D + GA DYV KPFSP EL AR+++ L Sbjct: 61 ELRKES---DIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVL 111 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 55.5 bits (132), Expect = 8e-10 Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 4/124 (3%) Query: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQXXXXXXXXXXXXXXXXEV 79 +L+VDD E ++S LLE EG+ +G EALQ++ ++ Sbjct: 4 LLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKLNESYKLVLLDVMMPKLNGI--- 60 Query: 80 CDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVKTHLELKQ 139 + LK+ + ++PV+ LTA E D + GA D + KPF+ EL+AR+K L Sbjct: 61 -ETLKEIRKVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRRSA 119 Query: 140 TRDN 143 + N Sbjct: 120 SPSN 123 Score = 52.8 bits (125), Expect = 5e-09 Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 5/103 (4%) Query: 742 ILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTA 801 +LL +D++ ++ LL+ G+ V+ NNG EAL L + Y +VL+DV MP+++G+ Sbjct: 4 LLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKLNE-SYKLVLLDVMMPKLNGIET 62 Query: 802 TEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKP 844 + IR+ S P ++ +TA + DR L G +D + KP Sbjct: 63 LKEIRKV---SNVP-VMMLTARGEDIDRVLGLELGADDCLPKP 101 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 54.3 bits (129), Expect = 2e-09 Identities = 36/107 (33%), Positives = 61/107 (57%), Gaps = 5/107 (4%) Query: 740 LTILLAEDNL-INQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDG 798 + ILL ED+L + + +A+ L +L Y VD+ + A ++ +YD+V++DV +PE+DG Sbjct: 1 MRILLVEDDLPLAETLAEALSDQL-YTVDIATDASLAWDYASRLEYDLVILDVMLPELDG 59 Query: 799 LTATEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKPI 845 +T + R S I+ +TA D+ L +G +DYV KP+ Sbjct: 60 ITLCQKWR---SHSYLMPILMMTARDTINDKITGLDAGADDYVVKPV 103 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 52.8 bits (125), Expect = 5e-09 Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 4/115 (3%) Query: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQ--AQXXXXXXXXXXXXXXXX 77 IL+V+D + I ++L E Y +VT G +A + + Sbjct: 3 ILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSGL 62 Query: 78 EVCDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVK 132 E+C +L+ Q +PV+ LTA E ++ ++ GA DY+TKPF ELLAR++ Sbjct: 63 ELCQKLRT--QGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAELLARLR 115 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 50.1 bits (118), Expect = 3e-08 Identities = 32/110 (29%), Positives = 61/110 (55%), Gaps = 10/110 (9%) Query: 742 ILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSAL-------AKGDYDVVLMDVEMP 794 IL+ ED + ++ L L++ GY V V++G++AL+ L + D++++D+ +P Sbjct: 33 ILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIMLP 92 Query: 795 EMDGLTATEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKP 844 +++GL +R G P I+ V+A E ++ L G +DY++KP Sbjct: 93 QVNGLDVCRSLR--FGGDNTP-ILIVSAKGSEMEKVTGLEVGADDYITKP 139 Score = 43.9 bits (102), Expect = 2e-06 Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 9/125 (7%) Query: 15 PESFLILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVT-------QAQXXXXXX 67 P S ILVV+D I L+ EGY V G +AL + QA Sbjct: 28 PPSHRILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIIL 87 Query: 68 XXXXXXXXXXEVCDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPEL 127 +VC L+ + P++ ++A + + + GA DY+TKPFS EL Sbjct: 88 DIMLPQVNGLDVCRSLRFGGD--NTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKEL 145 Query: 128 LARVK 132 +AR + Sbjct: 146 VARCR 150 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 49.3 bits (116), Expect = 6e-08 Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 2/124 (1%) Query: 17 SFLILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQXXXXXXXXXXXXXXX 76 S +LVV++ ++ + L+ EGY + G + + + Sbjct: 2 SHRVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSG 61 Query: 77 XEVCDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVKTHLE 136 E+C RL++ IP+I +TA ++ ++ + GA DY+ KPF+ E AR++ L Sbjct: 62 LELCRRLRE--MGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLR 119 Query: 137 LKQT 140 T Sbjct: 120 RTHT 123 Score = 42.0 bits (97), Expect = 9e-06 Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 3/103 (2%) Query: 742 ILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTA 801 +L+ E+ + +L LK GY V V +G + + + D+++++ +P M GL Sbjct: 5 VLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGL-- 62 Query: 802 TEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKP 844 E RR + R II +TA +R L +G +DY+ KP Sbjct: 63 -ELCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKP 104 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 49.3 bits (116), Expect = 6e-08 Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 4/103 (3%) Query: 742 ILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTA 801 IL+ ED ++ + K + + GY V NG E LA + ++V+MD+ +P +GL Sbjct: 6 ILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGLLL 65 Query: 802 TEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKP 844 +R +I +T E D+ L G +DY++KP Sbjct: 66 ARELREELSLP----LIFLTGRDNEVDKILGLEIGADDYLTKP 104 Score = 42.7 bits (99), Expect = 5e-06 Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 3/116 (2%) Query: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQXXXXXXXXXXXXXXXXEV 79 ILVV+D + + E EGY +G E + + Sbjct: 6 ILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGLLL 65 Query: 80 CDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVKTHL 135 L+++ +P+IFLT + + D + GA DY+TKPF+P EL R + L Sbjct: 66 ARELREE---LSLPLIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLL 118 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 48.5 bits (114), Expect = 1e-07 Identities = 30/103 (29%), Positives = 58/103 (56%), Gaps = 2/103 (1%) Query: 742 ILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTA 801 IL+ ED +++ L L + Y V ++ + A++ + K + ++L+D +P G+ Sbjct: 5 ILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKI-KENPKLILLDWMLPGRSGIQF 63 Query: 802 TEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKP 844 ++I++ + + P II +TA S E D CL +G +DY++KP Sbjct: 64 IQYIKKQESYAAIP-IIMLTAKSTEEDCIACLNAGADDYITKP 105 Score = 48.1 bits (113), Expect = 1e-07 Identities = 22/50 (44%), Positives = 32/50 (64%) Query: 83 LKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVK 132 +K+ IP+I LTA + ++D + GA DY+TKPFSP LLAR++ Sbjct: 67 IKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIE 116 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 48.1 bits (113), Expect = 1e-07 Identities = 30/103 (29%), Positives = 57/103 (55%), Gaps = 4/103 (3%) Query: 742 ILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTA 801 +L+ ++N + + ++K L + G+ +DV + G+ L+ G YD++++D +P++ GL Sbjct: 5 LLVDDENALTEPLSKALGHQ-GHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGLEI 63 Query: 802 TEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKP 844 I R G S ++ +TA DR L +G +DY+ KP Sbjct: 64 CRQI-RILGHSTP--VLFLTAKDTLDDRVAGLDAGGDDYLIKP 103 Score = 48.1 bits (113), Expect = 1e-07 Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 2/129 (1%) Query: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQXXXXXXXXXXXXXXXXEV 79 IL+VDD +S+ L +G++ G L Q E+ Sbjct: 4 ILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGLEI 63 Query: 80 CDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVKTHLELKQ 139 C +++ PV+FLTA + D + G DY+ KPF ELLARV+ L + Sbjct: 64 CRQIRI--LGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFELRELLARVRALLRRQS 121 Query: 140 TRDNLHHTL 148 + + TL Sbjct: 122 HGETITETL 130 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 47.8 bits (112), Expect = 2e-07 Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 31/178 (17%) Query: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQA--QXXXXXXXXXXXXXXXX 77 +L+V+D + + + L E Y +V G A + Q Sbjct: 3 LLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSGL 62 Query: 78 EVCDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVKTHLEL 137 E+C +L+ Q +P++ LTA ++ D ++ GA DY+ KPF ELLAR+++ Sbjct: 63 ELCQKLRG--QRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAELLARLRS---- 116 Query: 138 KQTRDNLHHTLLEQARTAEALACTSTRLGILVQNMQAGVLMTDAQGTIVVVNPEFARL 195 Q R+ E + Q +Q G D GT VV PE AR+ Sbjct: 117 ------------LQRRSPE----------LQPQQLQVGQWWLD-YGTFAVVTPEQARI 151 Score = 44.3 bits (103), Expect = 2e-06 Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 5/107 (4%) Query: 740 LTILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKG--DYDVVLMDVEMPEMD 797 + +LL ED + L++ Y VD V +G A S L +G +Y + + D +P + Sbjct: 1 MRLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLS 60 Query: 798 GLTATEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKP 844 GL + +R RS P I+ +TA DR L +G +DY+ KP Sbjct: 61 GLELCQKLRGQ--RSSLP-ILMLTAKDQIADRVEGLDAGADDYLIKP 104 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 47.0 bits (110), Expect = 3e-07 Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 3/108 (2%) Query: 741 TILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDY--DVVLMDVEMPEMDG 798 TIL+ ED I +++ L Y + NG AL L + D+++ DV MPEMDG Sbjct: 3 TILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDG 62 Query: 799 LTATEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKPIR 846 ++++ + P+I +TA D + + SG +DY+ KP + Sbjct: 63 HGLITALQKNAKTAAIPFIF-LTALGTMQDFRKGMNSGADDYLIKPFK 109 Score = 43.1 bits (100), Expect = 4e-06 Identities = 22/54 (40%), Positives = 31/54 (57%) Query: 83 LKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVKTHLE 136 L+++ +T IP IFLTA QD + GA DY+ KPF +LL V + L+ Sbjct: 69 LQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSRLQ 122 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 46.6 bits (109), Expect = 4e-07 Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 7/129 (5%) Query: 717 TEPPTLVSTEAISGPLFPYSSSNLTILLAEDNLINQQVAKLLLKKLG-YPVDVVNNGQEA 775 T+PP L + I+ P S +LL +D ++ + L+ G + VD+ N EA Sbjct: 38 TKPPYLPLHDCITAMAEPIS-----LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEA 92 Query: 776 LSALAKGDYDVVLMDVEMPEMDGLTATEHIRRSQGRSERPWIIAVTAYSMEGDRERCLAS 835 L +V+ D+ MP++DG + +R P ++ +TA M GDR + + Sbjct: 93 WDYLQHHLPALVISDIMMPQVDGYQFLQKLREDARFQSLP-VVFLTARGMTGDRIQGYQT 151 Query: 836 GMNDYVSKP 844 G + ++SKP Sbjct: 152 GCDAFLSKP 160 Score = 45.4 bits (106), Expect = 8e-07 Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 1/138 (0%) Query: 3 PSQPHPPIATFEPESFLILVVDDVKENIYVISELLEGEG-YSTTFVTSGPEALQRVTQAQ 61 P P T E +L+VDD + LE G + + EA + Sbjct: 41 PYLPLHDCITAMAEPISLLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHL 100 Query: 62 XXXXXXXXXXXXXXXXEVCDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKP 121 + +L++D + + +PV+FLTA D +Q + G +++KP Sbjct: 101 PALVISDIMMPQVDGYQFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKP 160 Query: 122 FSPPELLARVKTHLELKQ 139 F P EL A V+ L +Q Sbjct: 161 FDPDELEAIVRNLLARQQ 178 >SYNE-PCC-01-002221 slr1213 Length = 241 Score = 45.4 bits (106), Expect = 8e-07 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 6/107 (5%) Query: 742 ILLAEDNLINQQVAKLLLKKLGYPVDVV-NNGQEALSALAKGDYDVVLMDVEMP-EMDGL 799 IL+ ED + Q LLK GY + V+ ++G AL +A+ D+VL+D+ + E+DG+ Sbjct: 5 ILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEIDGI 64 Query: 800 TATEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKPIR 846 E I+ I+ +TA+S ER + YV KP R Sbjct: 65 EVAERIKSLYSIP----IVYLTAFSDGETLERAQKTNPQGYVIKPFR 107 Score = 45.1 bits (105), Expect = 1e-06 Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 22/186 (11%) Query: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTS-GPEALQRVTQAQ-XXXXXXXXXXXXXXXX 77 IL+V+D + I++LL+ +GY + S G AL+++ + Sbjct: 5 ILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEIDGI 64 Query: 78 EVCDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVKTHLEL 137 EV +R+K IP+++LTA ++ + L +A YV KPF +LL+ V + Sbjct: 65 EVAERIKS---LYSIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTVAIAIAN 121 Query: 138 KQTRDNLHHTLLEQARTAEALACTST-------RLGILVQNMQAGVLMTDAQGTIVVVNP 190 Q +Q + E TST L + +++ G+ + G I + Sbjct: 122 HQ----------QQRKPEEDTLSTSTGHYRLQPTLDYIEEHLDQGITVEFLAGAIGMSTA 171 Query: 191 EFARLF 196 F R F Sbjct: 172 YFCRFF 177 >SYNE-PCC-01-001575 slr0312 Length = 209 Score = 42.7 bits (99), Expect = 5e-06 Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 5/109 (4%) Query: 737 SSNLTILLAEDNLINQQVAKLLLKKLG--YPVDVVNNGQEALSALAKGDYDVVLMDVEMP 794 ++ + +L+A+D+ I +Q ++ + + NG++A++ + DV LMD+ MP Sbjct: 4 ATTIRVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMP 63 Query: 795 EMDGLTATEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSK 843 E++G+ A I + II +T Y + D R L +G Y+ K Sbjct: 64 EVEGVAAISAICAIVKFAR---IIVLTTYDSDEDIYRGLQAGAKGYLLK 109 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.318 0.135 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,255 Number of Sequences: 78 Number of extensions: 3889 Number of successful extensions: 192 Number of sequences better than 1.0e-05: 37 Number of HSP's better than 0.0 without gapping: 25 Number of HSP's successfully gapped in prelim test: 12 Number of HSP's that attempted gapping in prelim test: 28 Number of HSP's gapped (non-prelim): 84 length of query: 1014 length of database: 48,235 effective HSP length: 72 effective length of query: 942 effective length of database: 42,619 effective search space: 40147098 effective search space used: 40147098 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 97 (42.0 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-001437 slr0081 (262 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-001437 slr0081 526 e-152 SYNE-PCC-01-000414 sll0649 186 5e-50 SYNE-PCC-01-000242 sll0396 174 3e-46 SYNE-PCC-01-002033 slr0947 161 2e-42 SYNE-PCC-01-002486 slr1584 144 2e-37 SYNE-PCC-01-002672 slr1837 144 4e-37 SYNE-PCC-01-001461 slr0115 140 5e-36 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 137 4e-35 SYNE-PCC-01-000518 sll0789 131 2e-33 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 130 3e-33 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 130 6e-33 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 122 9e-31 SYNE-PCC-01-000523 sll0797 120 3e-30 SYNE-PCC-01-000877 sll1330 112 1e-27 SYNE-PCC-01-002086 slr1042 90 8e-21 SYNE-PCC-01-002731 slr1909 79 2e-17 SYNE-PCC-01-001133 sll1673 73 8e-16 SYNE-PCC-01-002489 slr1588 73 1e-15 SYNE-PCC-01-001306 sll1905 70 9e-15 SYNE-PCC-01-002635 slr1783 63 8e-13 SYNE-PCC-01-002788 slr1982 62 2e-12 SYNE-PCC-01-001132 sll1672 57 5e-11 SYNE-PCC-01-002879 slr2104 56 1e-10 SYNE-PCC-01-002618 slr1760 55 2e-10 SYNE-PCC-01-000800 sll1228 54 4e-10 SYNE-PCC-01-002873 slr2098 54 7e-10 SYNE-PCC-01-001075 sll1592 52 2e-09 SYNE-PCC-01-002617 slr1759 50 6e-09 HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator pr... 49 2e-08 SYNE-PCC-01-000608 sll0921 48 4e-08 SYNE-PCC-01-002221 slr1213 47 8e-08 SYNE-PCC-01-001160 sll1708 46 1e-07 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 526 bits (1355), Expect = e-152 Identities = 262/262 (100%), Positives = 262/262 (100%) Query: 1 MLVKYHLVGFPMATLEAPPHSLQHQEIPPSHRILVVEDEVSIRETIVLSLQEEGYEVYAV 60 MLVKYHLVGFPMATLEAPPHSLQHQEIPPSHRILVVEDEVSIRETIVLSLQEEGYEVYAV Sbjct: 1 MLVKYHLVGFPMATLEAPPHSLQHQEIPPSHRILVVEDEVSIRETIVLSLQEEGYEVYAV 60 Query: 61 DDGRDALALLQEFSEDPGQAAVDLIILDIMLPQVNGLDVCRSLRFGGDNTPILIVSAKGS 120 DDGRDALALLQEFSEDPGQAAVDLIILDIMLPQVNGLDVCRSLRFGGDNTPILIVSAKGS Sbjct: 61 DDGRDALALLQEFSEDPGQAAVDLIILDIMLPQVNGLDVCRSLRFGGDNTPILIVSAKGS 120 Query: 121 EMEKVTGLEVGADDYITKPFSLKELVARCRAMIRRQGLAGNNIAPFRKFRDLVLYPQECR 180 EMEKVTGLEVGADDYITKPFSLKELVARCRAMIRRQGLAGNNIAPFRKFRDLVLYPQECR Sbjct: 121 EMEKVTGLEVGADDYITKPFSLKELVARCRAMIRRQGLAGNNIAPFRKFRDLVLYPQECR 180 Query: 181 VLMRGEEVSLAPKEFRLLELFMSYPRRVWSREQLIEHIWGIDFMGDSKTVDVHIRWLREK 240 VLMRGEEVSLAPKEFRLLELFMSYPRRVWSREQLIEHIWGIDFMGDSKTVDVHIRWLREK Sbjct: 181 VLMRGEEVSLAPKEFRLLELFMSYPRRVWSREQLIEHIWGIDFMGDSKTVDVHIRWLREK 240 Query: 241 LEQDPSQPEYLVTVRGFGYRFG 262 LEQDPSQPEYLVTVRGFGYRFG Sbjct: 241 LEQDPSQPEYLVTVRGFGYRFG 262 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 186 bits (473), Expect = 5e-50 Identities = 103/235 (43%), Positives = 143/235 (60%), Gaps = 13/235 (5%) Query: 33 ILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIMLP 92 IL+VED+ I + I +L+ E + +DG L + QE DLI+LD+MLP Sbjct: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQE-------QVPDLIVLDLMLP 66 Query: 93 QVNGLDVCRSLRF--GGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARCR 150 +++GL+VC +R G + IL+++AKG E++++ GL GADDY+ KPFS +ELVAR R Sbjct: 67 KLDGLEVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVR 126 Query: 151 AMIRRQGLAGNNIAPFRKFR----DLVLYPQECRVLMRGEEVSLAPKEFRLLELFMSYPR 206 A++RRQ G + + DL + R EE+ L EF LL FMSYP Sbjct: 127 ALLRRQLRQGQPVGQIYRTNHFQVDLDQHQASRYQGDRQEELELTGLEFNLLATFMSYPG 186 Query: 207 RVWSREQLIEHIWGIDFMGDSKTVDVHIRWLREKLEQDPSQPEYLVTVRGFGYRF 261 RVW+R QLIE +WG DF GD + VD HIR LR+K+E DP+ P ++ TV G GY+F Sbjct: 187 RVWNRTQLIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGYKF 241 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 174 bits (441), Expect = 3e-46 Identities = 96/231 (41%), Positives = 137/231 (59%), Gaps = 13/231 (5%) Query: 30 SHRILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDI 89 SHR+LVVE+E + + L L+ EGY+V DG QEF D LII++ Sbjct: 2 SHRVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPD-------LIIVNG 54 Query: 90 MLPQVNGLDVCRSLRFGGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARC 149 LP ++GL++CR LR G PI++++AK E+V GL+ GADDYI KPF+ E AR Sbjct: 55 ALPGMSGLELCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARI 114 Query: 150 RAMIRRQGLAGNNIAPFRKFRDLVLYPQECRVLMRGEE-VSLAPKEFRLLELFMSYPRRV 208 R +RR + + F R + + R + RG+ + L KEF LL+ +S+ R+V Sbjct: 115 RVQLRRTHTTSDEVLQFADLR----FNRSTREIQRGDRLIDLTAKEFELLDYLLSHARQV 170 Query: 209 WSREQLIEHIWGIDFMGDSKTVDVHIRWLREKLEQDPSQPEYLVTVRGFGY 259 +REQ++E +WG DFMGDS ++V+IR+LR KLE +P + TVRG GY Sbjct: 171 LTREQILERVWGYDFMGDSNIIEVYIRYLRLKLEA-AGEPRLIQTVRGVGY 220 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 161 bits (408), Expect = 2e-42 Identities = 93/232 (40%), Positives = 139/232 (59%), Gaps = 13/232 (5%) Query: 35 VVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIMLPQV 94 +V+DE SIR + L GYEV DG +A+A E DP DL++LD+M+P++ Sbjct: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHE--SDP-----DLVVLDVMMPKL 53 Query: 95 NGLDVCRSLRFGGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARCRAMIR 154 +G VC+ LR D PI++++A G +++TGLE+GADDY+ KPFS KEL AR R+++R Sbjct: 54 DGYGVCQELRKESD-IPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLR 112 Query: 155 R---QGLAGNNIAPFRKFRDLVLYPQECRVLMRGEEVSLAPKEFRLLELFMSYPRRVWSR 211 R G+ G + + + + + +V E + L EF LLEL +S +SR Sbjct: 113 RVDKNGMPGIPSSGVLQIATIRIDTNKRQVYKGDERIRLTGMEFSLLELLVSRSGEPFSR 172 Query: 212 EQLIEHIWGI--DFMGDSKTVDVHIRWLREKLEQDPSQPEYLVTVRGFGYRF 261 ++++ +WG + D++ VDVHI LR KLE+DPS PE ++T RG GY F Sbjct: 173 SEILQEVWGYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGYLF 224 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 144 bits (364), Expect = 2e-37 Identities = 87/229 (37%), Positives = 137/229 (59%), Gaps = 10/229 (4%) Query: 32 RILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIML 91 RIL+VED++ + ET+ +L ++ +Y VD DA +L +++ + DL+ILD+ML Sbjct: 2 RILLVEDDLPLAETLAEALSDQ---LYTVDIATDA-SLAWDYAS---RLEYDLVILDVML 54 Query: 92 PQVNGLDVCRSLRFGGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARCRA 151 P+++G+ +C+ R PIL+++A+ + +K+TGL+ GADDY+ KP L EL AR RA Sbjct: 55 PELDGITLCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRA 114 Query: 152 MIRRQGLAGNNIAPFRKFRDLVLYPQECRVLMRGEEVSLAPKEFRLLELFMSYPRRVWSR 211 ++RR G A P ++ + L P V E +SL KE+ +LEL + RRV SR Sbjct: 115 LLRR-GCA--TCQPVLEWGPIRLDPSTYEVSYDNEVLSLTRKEYSILELLLRNGRRVLSR 171 Query: 212 EQLIEHIWGIDFMGDSKTVDVHIRWLREKLEQDPSQPEYLVTVRGFGYR 260 +I+ IW ++ + TV VH+R LR+KL+ + + TV G GYR Sbjct: 172 SMIIDSIWKLESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGYR 220 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 144 bits (362), Expect = 4e-37 Identities = 87/240 (36%), Positives = 136/240 (56%), Gaps = 23/240 (9%) Query: 33 ILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIMLP 92 IL+V+DE ++ E + +L +G+ + D G+ LA+ GQ DL+ILD MLP Sbjct: 4 ILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIA-----GQ--YDLLILDWMLP 56 Query: 93 QVNGLDVCRSLRFGGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARCRAM 152 QV+GL++CR +R G +TP+L ++AK + ++V GL+ G DDY+ KPF L+EL+AR RA+ Sbjct: 57 QVSGLEICRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFELRELLARVRAL 116 Query: 153 IRRQ----------GLAGNNIAPFRKFR-DLVLYPQECRVLMRGEEVSLAPKEFRLLELF 201 +RRQ G NN+ D+ C +G+ ++L+ KE LL LF Sbjct: 117 LRRQSHGETITETLGAVKNNLLSVNNVSLDVANQVAYC----QGQRIALSEKEVALLTLF 172 Query: 202 MSYPRRVWSREQLIEHIWGIDFMGDSKTVDVHIRWLREKLEQDPSQPEYLVTVRGFGYRF 261 + P ++ S E++ H+W + S + +R LR K+EQ P+ P + +V G GY F Sbjct: 173 LQAPGQILSHEEIYSHLWPGESPPSSNVLAALVRLLRRKIEQ-PNAPRLINSVYGKGYCF 231 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 140 bits (352), Expect = 5e-36 Identities = 81/236 (34%), Positives = 130/236 (55%), Gaps = 19/236 (8%) Query: 32 RILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIML 91 RIL+++D+ +I + + ++L+ GY+V DG AL + D LI+LD+ML Sbjct: 3 RILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPD-------LIMLDLML 55 Query: 92 PQVNGLDVCRSLRFGGDNT--PILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARC 149 P+V+G VC+ LR P+L+++A G +K+ G + GADDY+TKPF ++E++AR Sbjct: 56 PKVDGFTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARV 115 Query: 150 RAMIRRQGLAGNNIAPFRKFRD------LVLYPQECRVLMRGEEVSLAPKEFRLLELFMS 203 RA++RR + I K + L L P+ + G+ + L EF LL + Sbjct: 116 RALLRRT----DRIPQAAKHSEILNQGPLTLVPERFEAIWFGKSIKLTHLEFELLHCLLQ 171 Query: 204 YPRRVWSREQLIEHIWGIDFMGDSKTVDVHIRWLREKLEQDPSQPEYLVTVRGFGY 259 + S ++ +WG + D +T+ VHIR LR KLE +P +P ++ TV G GY Sbjct: 172 RHGQTVSPSDILREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTVYGAGY 227 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 137 bits (345), Expect = 4e-35 Identities = 91/235 (38%), Positives = 136/235 (57%), Gaps = 16/235 (6%) Query: 30 SHRILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDI 89 + +IL+VEDE +IRE I L L ++ Y+V D + A+ + E+P LI+LD Sbjct: 2 TRKILIVEDECAIREMIALFLSQKYYDVIEASDFKTAI---NKIKENP-----KLILLDW 53 Query: 90 MLPQVNGLDVCRSLRFGGDNT--PILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVA 147 MLP +G+ + ++ PI++++AK +E + + L GADDYITKPFS + L+A Sbjct: 54 MLPGRSGIQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLA 113 Query: 148 RCRAMIRRQGLAGNNIAPFRKFRDLVLYPQECRVLMRGEEVSLAPKEFRLLELFMSYPRR 207 R A+ RR + F + +L + RV + +E++L+ EF+LL FM +P + Sbjct: 114 RIEAVWRR---IYEQQSQFIQIDELSIDENAQRVFFQQQEINLSSTEFKLLHFFMRHPEK 170 Query: 208 VWSREQLIEHIWGIDFMGDSKTVDVHIRWLREKLEQDPSQPE-YLVTVRGFGYRF 261 V+SREQL+ IW D + +TVD +IR LR L P Q E Y+ TVRG GYRF Sbjct: 171 VYSREQLLNRIWHNDLEVEYRTVDSYIRRLRRNLA--PFQCEHYIQTVRGSGYRF 223 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 131 bits (330), Expect = 2e-33 Identities = 86/237 (36%), Positives = 128/237 (54%), Gaps = 22/237 (9%) Query: 32 RILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIML 91 R+L+VEDE + + +L+ E Y V V DG A + L D G L I D M+ Sbjct: 2 RLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYL-----DQGWVNYTLAIFDWMV 56 Query: 92 PQVNGLDVCRSLRFGGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARCRA 151 P ++GL++C+ LR + PIL+++AK ++V GL+ GADDY+ KPF + EL+AR R+ Sbjct: 57 PGLSGLELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAELLARLRS 116 Query: 152 MIRR-------QGLAGNNIAPFRKFRDLVLYPQECRVLMRGEEVSLAPKEFRLLELFMSY 204 + RR Q G + F V+ P++ R ++L KEF+LLE FM + Sbjct: 117 LQRRSPELQPQQLQVGQWWLDYGTF--AVVTPEQAR-------ITLTAKEFQLLEYFMKH 167 Query: 205 PRRVWSREQLIEHIWGIDFMGDSKTVDVHIRWLREKLEQDPSQPEYLVTVRGFGYRF 261 P+++ S EQ+ +W + S V +R LR KLE + S + TV G GYRF Sbjct: 168 PQQILSSEQIKNQLWALSAESTSNVVAAQVRLLRRKLE-EYSHGNLIETVYGLGYRF 223 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 130 bits (328), Expect = 3e-33 Identities = 78/238 (32%), Positives = 132/238 (55%), Gaps = 19/238 (7%) Query: 32 RILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIML 91 +ILVVEDE+ R T+ + EGY+V+ ++G + +L + ++L+++DI L Sbjct: 5 KILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHN-------INLVVMDINL 57 Query: 92 PQVNGLDVCRSLRFGGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARCRA 151 P NGL + R LR + P++ ++ + +E++K+ GLE+GADDY+TKPF+ +EL R R Sbjct: 58 PGKNGLLLARELR-EELSLPLIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARN 116 Query: 152 MIRR-------QGLAGNNIAPFRKFR-DLVLYPQECRVLMRGEEVSLAPKEFRLLELFMS 203 ++ R + G F ++ DL + G+E L EFR + F Sbjct: 117 LLHRAMPHQEKENTFGREFYRFNGWKLDL---NSHSLITPEGQEFKLPRSEFRAMLHFCE 173 Query: 204 YPRRVWSREQLIEHIWGIDFMGDSKTVDVHIRWLREKLEQDPSQPEYLVTVRGFGYRF 261 P ++ +RE+L++ + G + +TVDV IR +R+ E P+ P ++T+ G GYRF Sbjct: 174 NPGKLQTREELLKKMTGRELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGYRF 231 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 130 bits (326), Expect = 6e-33 Identities = 72/230 (31%), Positives = 134/230 (58%), Gaps = 11/230 (4%) Query: 32 RILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIML 91 ++L+V+D++ + E + L+ EG++V ++G +AL L E + L++LD+M+ Sbjct: 3 KLLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKLNE--------SYKLVLLDVMM 54 Query: 92 PQVNGLDVCRSLRFGGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARCRA 151 P++NG++ + +R N P+++++A+G ++++V GLE+GADD + KPF+ +EL+AR +A Sbjct: 55 PKLNGIETLKEIR-KVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKA 113 Query: 152 MIRRQGLAGNNIA--PFRKFRDLVLYPQECRVLMRGEEVSLAPKEFRLLELFMSYPRRVW 209 ++RR NNI+ F + L+ E ++L EF++L L + V Sbjct: 114 ILRRSASPSNNISNVEILSFDGITLHFSHGIATYNEENLNLTDYEFKILCLLLKSKGNVV 173 Query: 210 SREQLIEHIWGIDFMGDSKTVDVHIRWLREKLEQDPSQPEYLVTVRGFGY 259 SRE+L + +++D+HI LR KL + ++P + T+RG GY Sbjct: 174 SREELSLEVMEKPLTPFDRSLDMHISNLRRKLPKRKNKPSWFKTLRGKGY 223 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 122 bits (307), Expect = 9e-31 Identities = 79/231 (34%), Positives = 130/231 (56%), Gaps = 15/231 (6%) Query: 32 RILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIML 91 RIL++ED+ I + + L + G+ V DG+ +A L A D ++LD+ L Sbjct: 2 RILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTS-------APYDAVVLDLTL 54 Query: 92 PQVNGLDVCRSLRFGGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARCRA 151 P+++GL+V + R + P+LI++A+ + E+V GL+ GADDY+ KPF+L E+ AR +A Sbjct: 55 PKLDGLEVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQA 114 Query: 152 MIRRQGLAGNNIAPFRKFRDLVLYPQECRVLMRGEEVSLAPKEFRLLELFMSYPRRVWSR 211 +IRR+ +++ + + L + V + + +SL +E++LLELFM RV SR Sbjct: 115 LIRRRYGYHHSVI---EQAGVKLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSR 171 Query: 212 EQLIEHIWGIDFMGDSKTVDVHIRWLREKLEQDPSQPEYLVTVRGFGYRFG 262 + E + D S +DVHI LR+KL + +++ TV G GY G Sbjct: 172 SSIEEKLSSWDEEISSGALDVHIYNLRQKLGK-----QFIRTVHGVGYALG 217 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 120 bits (302), Expect = 3e-30 Identities = 81/236 (34%), Positives = 127/236 (53%), Gaps = 13/236 (5%) Query: 32 RILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQ-EFSEDPGQAAVDLIILDIM 90 RIL+VEDE + I L E Y V V DG A L+ +++E L I+D + Sbjct: 2 RILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTE------YTLAIVDWL 55 Query: 91 LPQVNGLDVCRSLRFGGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARCR 150 LP ++GL++C+ LR G++ P+L+++A G +V GL+ GADDY+TKPF + EL+AR R Sbjct: 56 LPGLSGLELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAELLARLR 115 Query: 151 AMIRRQGLAGNNIAPFRKF-----RDLVLYPQECRVLMRGEEVSLAPKEFRLLELFMSYP 205 A+ RR I F +L+ + + +E++L +EF++ + M P Sbjct: 116 ALQRRSPQFQPQILTLGNFSLDPSNNLLSVTISEPLNLERQEIALTVREFQIFQYLMQNP 175 Query: 206 RRVWSREQLIEHIWGIDFMGDSKTVDVHIRWLREKLEQDPSQPEYLVTVRGFGYRF 261 R+ S ++ + +W +D S V +R +R KL Q + P + TV G GYRF Sbjct: 176 ERIISGSKIRQQLWDLDEEPMSNVVAAQMRLIRRKLAQQ-NCPCPIKTVPGQGYRF 230 >SYNE-PCC-01-000877 sll1330 Length = 250 Score = 112 bits (280), Expect = 1e-27 Identities = 80/231 (34%), Positives = 121/231 (52%), Gaps = 15/231 (6%) Query: 33 ILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIMLP 92 I VVE +R + LQ+ GY V A Q F+ L ++D L Sbjct: 6 ISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQAR---QAFNNQ----LPTLAVIDSDLT 58 Query: 93 QVNGLDVCRSLRFGGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARCRAM 152 +G+++CR L + + I I+SAK +E + V GL+ GADDY+TKPF ++E +AR + Sbjct: 59 DGDGIELCRWL-YQQHQSMIFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECL 117 Query: 153 IRR-QGLAGNNIAPFRKFR-DLVLYPQECRVLMRGEEVSLAPKEFRLLELFMSYPRRVWS 210 IRR + +A + + + DLV + RV +G V L P+EF LL + S Sbjct: 118 IRRVRTVAAPLLLDYGVLKIDLV----QRRVEYQGNFVDLTPQEFSLLYVLTQAEGSALS 173 Query: 211 REQLIEHIWGIDFMGDSKTVDVHIRWLREKLEQDPSQPEYLVTVRGFGYRF 261 R +L+ W + + + +T+D H+ LR+K+E DP QP + TVR GYRF Sbjct: 174 RTELLRRAWP-EAIDNPRTIDTHVLSLRKKIETDPRQPSLIQTVRNVGYRF 223 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 89.7 bits (221), Expect = 8e-21 Identities = 49/124 (39%), Positives = 75/124 (60%), Gaps = 9/124 (7%) Query: 33 ILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIMLP 92 +L+VED S RE I L++ G++V DG +AL LQ FS D L++LDI++P Sbjct: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPD-------LVVLDIVMP 82 Query: 93 QVNGLDVCRSLRFGGD--NTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARCR 150 ++NG +VCR ++ N P+++ S+KG E ++ G+ GAD YI KPF ELV + Sbjct: 83 RMNGYEVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIK 142 Query: 151 AMIR 154 ++R Sbjct: 143 QLLR 146 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 78.6 bits (192), Expect = 2e-17 Identities = 52/162 (32%), Positives = 89/162 (54%), Gaps = 16/162 (9%) Query: 30 SHRILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDI 89 ++ +L+V+D+ ++ + L+ +GY+V +GR+AL LL D+I+ DI Sbjct: 7 NYHLLLVDDDPNLLLLVKDYLEYQGYQVTTAGNGREALDLLTT-------TVPDMIVCDI 59 Query: 90 MLPQVNGLDVCRSLRFGGDNT--PILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVA 147 M+P+++G +R D + P++ +SAKG +V GL VGAD Y+ KPF +EL A Sbjct: 60 MMPEMDGYAFIEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAA 119 Query: 148 RCRAMIRRQG--LAGNN-----IAPFRKFRDLVLYPQECRVL 182 + ++ +R+ L NN A + RD+ L P E +V+ Sbjct: 120 QVQSCLRQADRLLQHNNHPLEDNARVQVARDVELTPTETKVI 161 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 73.2 bits (178), Expect = 8e-16 Identities = 52/147 (35%), Positives = 77/147 (52%), Gaps = 11/147 (7%) Query: 33 ILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIMLP 92 IL+V+D + + + L GY V +V G+ AL LQ DLI+LDI +P Sbjct: 11 ILLVDDLPNNLQLLSDLLINLGYTVRSVTSGKMALRTLQV-------KRPDLILLDIKMP 63 Query: 93 QVNGLDVCRSLRFGGD--NTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARCR 150 ++G VC ++ + + PI+ +SA G +KV E G DYITKPF ++E+VAR Sbjct: 64 DMDGYQVCEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQIEEVVARIE 123 Query: 151 AM--IRRQGLAGNNIAPFRKFRDLVLY 175 I+RQ +A R+ + VLY Sbjct: 124 GQFTIQRQRIALKREVRKRREAEEVLY 150 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 72.8 bits (177), Expect = 1e-15 Identities = 43/126 (34%), Positives = 70/126 (55%), Gaps = 7/126 (5%) Query: 33 ILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIMLP 92 ILVVEDE IRE I +L E Y++ ++G AL LL P DLII D+M+P Sbjct: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMP-----DLIICDVMMP 58 Query: 93 QVNGLDVCRSLRFGGDNT--PILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARCR 150 +++G + +L+ P + ++A G+ + G+ GADDY+ KPF ++L+ Sbjct: 59 EMDGHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVN 118 Query: 151 AMIRRQ 156 + +++Q Sbjct: 119 SRLQKQ 124 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 69.7 bits (169), Expect = 9e-15 Identities = 45/125 (36%), Positives = 67/125 (53%), Gaps = 9/125 (7%) Query: 28 PPSHRILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIIL 87 P S ILVV+D I L+ EGY V G +AL + QA DLI+L Sbjct: 15 PESFLILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVT-------QAQPDLILL 67 Query: 88 DIMLPQVNGLDVCRSLRFGGD--NTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKEL 145 D+M+P ++GL+VC L+ + P++ ++A + + + GA DY+TKPFS EL Sbjct: 68 DLMMPGMDGLEVCDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPEL 127 Query: 146 VARCR 150 +AR + Sbjct: 128 LARVK 132 Score = 52.8 bits (125), Expect = 1e-09 Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 10/116 (8%) Query: 33 ILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIMLP 92 IL+ ED + ++ L L++ GY V V++G++AL+ L + D++++D+ +P Sbjct: 742 ILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSAL-------AKGDYDVVLMDVEMP 794 Query: 93 QVNGLDVCRSLR--FGGDNTP-ILIVSAKGSEMEKVTGLEVGADDYITKPFSLKEL 145 +++GL +R G P I+ V+A E ++ L G +DY++KP L+ L Sbjct: 795 EMDGLTATEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKPIRLEAL 850 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 63.2 bits (152), Expect = 8e-13 Identities = 43/153 (28%), Positives = 80/153 (52%), Gaps = 13/153 (8%) Query: 33 ILVVEDEVSIRETIVLSLQEEG-YEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIML 91 +L+V+DE +RE++ L++ G ++V + +A LQ L+I DIM+ Sbjct: 58 LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPA-------LVISDIMM 110 Query: 92 PQVNGLDVCRSLRFGG--DNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARC 149 PQV+G + LR + P++ ++A+G +++ G + G D +++KPF EL A Sbjct: 111 PQVDGYQFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIV 170 Query: 150 RAMIRRQGLAGNNIAPFRKFRDLVLYPQECRVL 182 R ++ RQ + + + K +++ QE R L Sbjct: 171 RNLLARQQASSDAGSESAKLQEIY---QEIRAL 200 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 61.6 bits (148), Expect = 2e-12 Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 9/124 (7%) Query: 32 RILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIML 91 ++L+VED R+ + L +GYEV DG A+ + SE P LI++D+ L Sbjct: 6 KVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMA--ISESP-----QLILMDMSL 58 Query: 92 PQVNGLDVCRSLRF--GGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARC 149 P ++G + ++ G + PI+ ++A ++ + G DDY TKP +K L+ + Sbjct: 59 PIIDGWTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKM 118 Query: 150 RAMI 153 A+I Sbjct: 119 EALI 122 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 57.4 bits (137), Expect = 5e-11 Identities = 32/114 (28%), Positives = 63/114 (55%), Gaps = 9/114 (7%) Query: 29 PSHRILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILD 88 P ++ILVV+D+ R+ ++ L G+E+ +G++A+AL + + LI +D Sbjct: 628 PVYKILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEP-------HLIFMD 680 Query: 89 IMLPQVNGLDVCRSLR--FGGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPF 140 + +P ++G + + ++ G+ T ++ ++A E EK L G DD++ KPF Sbjct: 681 MRMPVMDGYEATKYIKGQVKGNATAVVALTASVLEEEKAIVLSAGCDDFLRKPF 734 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 56.2 bits (134), Expect = 1e-10 Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 9/130 (6%) Query: 12 MATLEAPPHSLQHQEIPPSHRILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQ 71 ++ LEA P Q IL+VED RE L +G V ++G++AL LL Sbjct: 699 VSILEAKPSVTQAITQLEGASILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLT 758 Query: 72 EFSEDPGQAAVDLIILDIMLPQVNGLDVCRSLRFG--GDNTPILIVSAKGSEMEKVTGLE 129 + D I++DI +P +NG D R++R N PI+ ++A ++ L+ Sbjct: 759 SNT-------YDAILMDIQMPMLNGYDATRAIRQQEYHRNLPIIAMTANAMAGDQEKALD 811 Query: 130 VGADDYITKP 139 G +D++TKP Sbjct: 812 AGMNDHLTKP 821 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 55.1 bits (131), Expect = 2e-10 Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 9/129 (6%) Query: 32 RILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIML 91 +ILVV+D+ +R + + LQ+EG+ V +G +AL E ++++LD ++ Sbjct: 13 KILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKP-------EVVLLDAVM 65 Query: 92 PQVNGLDVCRSLR--FGGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARC 149 P ++G C++L + + +L+++ E E GA DY+TKP L R Sbjct: 66 PVMDGFACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRV 125 Query: 150 RAMIRRQGL 158 + ++ + L Sbjct: 126 KRLLYQNRL 134 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 54.3 bits (129), Expect = 4e-10 Identities = 37/145 (25%), Positives = 73/145 (50%), Gaps = 15/145 (10%) Query: 11 PMATLEAPPHSLQHQEI--PP----SHRILVVEDEVSIRETIVLSLQEEGYEVYAVDDGR 64 P+ + AP + + + PP + ++LVV+D R + L G+ V ++G Sbjct: 392 PVQVMAAPKPTPETSAVTLPPLDQYNQKVLVVDDRPESRLLLRQLLTSLGFVVQEAENGE 451 Query: 65 DALALLQEFSEDPGQAAVDLIILDIMLPQVNGLDVCRSLRFG--GDNTPILIVSAKGSEM 122 A+AL + + +I++D+ +P ++G + ++ G +T I+ ++A E Sbjct: 452 MAIALWESWHPQ-------VILMDMQMPVLDGRSTTQKIKASPQGQHTIIIALTASAFEG 504 Query: 123 EKVTGLEVGADDYITKPFSLKELVA 147 E+ L G DD+++KPF +EL+A Sbjct: 505 ERAEILSAGCDDFLSKPFRPEELIA 529 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 53.5 bits (127), Expect = 7e-10 Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 4/125 (3%) Query: 19 PHSLQHQEIPPSHRILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPG 78 PH L + R+LVV+D R + L++ + V V+ G +AL L E D Sbjct: 759 PHRLVLSKDLEGKRVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAE--ADRE 816 Query: 79 QAAVDLIILDIMLPQVNGLDVCRSLRFGGDN--TPILIVSAKGSEMEKVTGLEVGADDYI 136 ++ +D +P ++GL+V R L+ G N I IV+A G E V +G DD + Sbjct: 817 NHPHSIVFIDWQMPNMDGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVL 876 Query: 137 TKPFS 141 KP S Sbjct: 877 VKPIS 881 Score = 43.1 bits (100), Expect = 9e-07 Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 9/116 (7%) Query: 32 RILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIML 91 RIL+VED +E L++ G+ V +G AL L A L+++D+ + Sbjct: 926 RILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNN-------NAYALVLMDMQM 978 Query: 92 PQVNGLDVCRSLRFGGD--NTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKEL 145 P+++G++ ++R PI+ ++A + ++ L+ G +D++ KP +EL Sbjct: 979 PEMDGIEATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEEL 1034 >SYNE-PCC-01-001075 sll1592 Length = 226 Score = 52.0 bits (123), Expect = 2e-09 Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 9/127 (7%) Query: 28 PPSHRILVVEDEVSIRETIVLSL-QEEGYEVYA-VDDGRDALALLQEFSEDPGQAAVDLI 85 P S RIL+VED+ R +V L QE G +V +DG A+A + Q D++ Sbjct: 5 PTSIRILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVN-------QQLFDVV 57 Query: 86 ILDIMLPQVNGLDVCRSLRFGGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKEL 145 ILD+ LP + G++ C ++ P+LI+++ +E A Y K + + L Sbjct: 58 ILDVGLPGIGGIEACHQIKKIHPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETL 117 Query: 146 VARCRAM 152 V R++ Sbjct: 118 VLAIRSV 124 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 50.4 bits (119), Expect = 6e-09 Identities = 31/122 (25%), Positives = 64/122 (52%), Gaps = 10/122 (8%) Query: 27 IPPSHRILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLII 86 + P+ +IL+ ED + ++ L GY V ++G++ + L++ DL++ Sbjct: 1186 LQPALQILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEK-------KFYDLVL 1238 Query: 87 LDIMLPQVNGLDVCRSLR--FGGDNTP-ILIVSAKGSEMEKVTGLEVGADDYITKPFSLK 143 +D+ +P ++G+ CR +R + P I+ ++A ++ L+ G D YI+KP S+ Sbjct: 1239 MDMQMPVMDGITACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISIN 1298 Query: 144 EL 145 +L Sbjct: 1299 QL 1300 >HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator protein (narP) Length = 208 Score = 48.5 bits (114), Expect = 2e-08 Identities = 34/122 (27%), Positives = 68/122 (55%), Gaps = 12/122 (9%) Query: 32 RILVVEDEVSIRETIVLSLQ-EEGYEVYA-VDDGRDALALLQEFSEDPGQAAVDLIILDI 89 ++L+++D +R I ++ ++ +EV A V G + +++ Q + D+IILD+ Sbjct: 6 KVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVAL-------QTSPDVIILDL 58 Query: 90 MLPQVNGLDVCRSLRFGGDNTPILIVSAKGSEMEKVTGLEVGADDYI---TKPFSLKELV 146 + ++GLD + LR G + ILI++ ++ + T ++ GAD Y+ T+P +L E + Sbjct: 59 NMKGLSGLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQI 118 Query: 147 AR 148 R Sbjct: 119 KR 120 >SYNE-PCC-01-000608 sll0921 Length = 222 Score = 47.8 bits (112), Expect = 4e-08 Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 11/124 (8%) Query: 32 RILVVEDEVSIRETIVLSL-QEEGYE-VYAVDDGRDALALLQEFSEDPGQAAVDLIILDI 89 RI ++EDE IR+ + +L E +E V +GR L ++Q Q D++I+DI Sbjct: 5 RIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQ-------QTRPDVVIIDI 57 Query: 90 MLPQVNGLDVCRSLRFGGDNTP--ILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVA 147 LP +NG+DV + L+ G N ++I++ E + GAD Y K + L+ Sbjct: 58 GLPDMNGIDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIE 117 Query: 148 RCRA 151 +A Sbjct: 118 AIQA 121 >SYNE-PCC-01-002221 slr1213 Length = 241 Score = 46.6 bits (109), Expect = 8e-08 Identities = 34/120 (28%), Positives = 65/120 (54%), Gaps = 14/120 (11%) Query: 32 RILVVEDEVSIRETIVLSLQEEGYEVYAV-DDGRDALALLQEFSEDPGQAAVDLIILDIM 90 +IL+VEDE + + I L+ +GYE+ + DG AL + EF DL++LDI Sbjct: 4 KILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYP-------DLVLLDIR 56 Query: 91 LP-QVNGLDVCRSLRFGGDNTPILIVSA--KGSEMEKVTGLEVGADDYITKPFSLKELVA 147 + +++G++V ++ + PI+ ++A G +E+ + Y+ KPF ++L++ Sbjct: 57 IKGEIDGIEVAERIK-SLYSIPIVYLTAFSDGETLERAQ--KTNPQGYVIKPFRREQLLS 113 >SYNE-PCC-01-001160 sll1708 Length = 226 Score = 45.8 bits (107), Expect = 1e-07 Identities = 57/252 (22%), Positives = 112/252 (44%), Gaps = 50/252 (19%) Query: 19 PHSLQHQEIPPSHRILVVEDEVSIRETIVLSL-QEEGYEVYA-VDDGRDALALLQEFSED 76 PH ++ + P +IL+VED+ ++ + +L E +E+ VD+G A+ Sbjct: 6 PHRVKIEPCLPM-KILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQ-------- 56 Query: 77 PGQAAV---DLIILDIMLPQVNGLDVCRSLRFGGDNTPILIVSAKGSEMEKVTGLEVGAD 133 QAAV DLI++DI LP ++G++ + ++ I+++++ E + L GAD Sbjct: 57 --QAAVLNPDLIVMDIGLPGLDGIEATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGAD 114 Query: 134 DYITKPFSLKELVARCRAMIRRQGLAGNNIAPFRKFRDLVLYPQECRVLM---------- 183 Y K +L+ L+ A + G L PQ RV++ Sbjct: 115 AYCVKGATLERLILAIAA--AQDGAT-------------YLDPQIARVVVENLKPPVPEG 159 Query: 184 RGEEVSLAPKEFRLLELFMSYPRRVWSREQLIEHIWGIDFMGDSKTVDVHIRWLREKLEQ 243 + + SL+ +E +L+L + S +++ + ++ + T+ H+R + KL Sbjct: 160 QADVSSLSEREIDVLKLIVEGK----SNQEIAQTLY-----LSTNTIKTHVRGIMNKLSV 210 Query: 244 DPSQPEYLVTVR 255 D ++ +R Sbjct: 211 DDRVQAAVIALR 222 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.323 0.142 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,824 Number of Sequences: 78 Number of extensions: 990 Number of successful extensions: 99 Number of sequences better than 1.0e-05: 32 Number of HSP's better than 0.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 19 Number of HSP's gapped (non-prelim): 37 length of query: 262 length of database: 48,235 effective HSP length: 61 effective length of query: 201 effective length of database: 43,477 effective search space: 8738877 effective search space used: 8738877 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 92 (40.0 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-001461 slr0115 (241 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-001461 slr0115 484 e-140 SYNE-PCC-01-002033 slr0947 180 3e-48 SYNE-PCC-01-000414 sll0649 160 3e-42 SYNE-PCC-01-002486 slr1584 153 4e-40 SYNE-PCC-01-000242 sll0396 151 2e-39 SYNE-PCC-01-002672 slr1837 142 8e-37 SYNE-PCC-01-001437 slr0081 140 5e-36 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 133 5e-34 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 128 1e-32 SYNE-PCC-01-000877 sll1330 118 2e-29 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 118 2e-29 SYNE-PCC-01-000518 sll0789 115 1e-28 SYNE-PCC-01-000523 sll0797 109 9e-27 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 105 1e-25 SYNE-PCC-01-001306 sll1905 102 1e-24 SYNE-PCC-01-002731 slr1909 101 3e-24 SYNE-PCC-01-001133 sll1673 96 8e-23 SYNE-PCC-01-002489 slr1588 96 1e-22 SYNE-PCC-01-002635 slr1783 93 7e-22 SYNE-PCC-01-002086 slr1042 91 4e-21 SYNE-PCC-01-002788 slr1982 86 8e-20 SYNE-PCC-01-002618 slr1760 73 1e-15 SYNE-PCC-01-000800 sll1228 64 6e-13 SYNE-PCC-01-000608 sll0921 60 5e-12 SYNE-PCC-01-002879 slr2104 56 9e-11 SYNE-PCC-01-002873 slr2098 55 2e-10 SYNE-PCC-01-001132 sll1672 55 2e-10 HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator pr... 55 2e-10 SYNE-PCC-01-001575 slr0312 52 2e-09 SYNE-PCC-01-002221 slr1213 50 5e-09 SYNE-PCC-01-001160 sll1708 50 5e-09 SYNE-PCC-01-002617 slr1759 49 1e-08 SYNE-PCC-01-002778 slr1969 46 1e-07 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 484 bits (1247), Expect = e-140 Identities = 241/241 (100%), Positives = 241/241 (100%) Query: 1 MPRILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDG 60 MPRILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDG Sbjct: 1 MPRILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDG 60 Query: 61 FTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLR 120 FTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLR Sbjct: 61 FTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLR 120 Query: 121 RTDRIPQAAKHSEILNQGPLTLVPERFEAIWFGKSIKLTHLEFELLHCLLQRHGQTVSPS 180 RTDRIPQAAKHSEILNQGPLTLVPERFEAIWFGKSIKLTHLEFELLHCLLQRHGQTVSPS Sbjct: 121 RTDRIPQAAKHSEILNQGPLTLVPERFEAIWFGKSIKLTHLEFELLHCLLQRHGQTVSPS 180 Query: 181 DILREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTVYGAGYCLELSTEEGGGSP 240 DILREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTVYGAGYCLELSTEEGGGSP Sbjct: 181 DILREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTVYGAGYCLELSTEEGGGSP 240 Query: 241 T 241 T Sbjct: 241 T 241 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 180 bits (457), Expect = 3e-48 Identities = 96/235 (40%), Positives = 145/235 (61%), Gaps = 8/235 (3%) Query: 6 IIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFTVCQ 65 ++DD+ +I ++ L M GY+V A DG + A + PDL++LD+M+PK+DG+ VCQ Sbjct: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 Query: 66 RLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLRRTDR- 124 LR++ +DIP++MLTALG + D+I G + GADDY+ KPF +E+ AR+R++LRR D+ Sbjct: 61 ELRKE---SDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKN 117 Query: 125 -IPQAAKHSEILNQGPLTLVPERFEAIWFGKSIKLTHLEFELLHCLLQRHGQTVSPSDIL 183 +P S +L + + + + + I+LT +EF LL L+ R G+ S S+IL Sbjct: 118 GMP-GIPSSGVLQIATIRIDTNKRQVYKGDERIRLTGMEFSLLELLVSRSGEPFSRSEIL 176 Query: 184 REVWGYEPDDDIET--IRVHIRHLRTKLEPNPRRPRFIKTVYGAGYCLELSTEEG 236 +EVWGY P+ ++T + VHI LR KLE +P P I T G GY + E G Sbjct: 177 QEVWGYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGYLFQRILEPG 231 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 160 bits (406), Expect = 3e-42 Identities = 93/234 (39%), Positives = 134/234 (57%), Gaps = 6/234 (2%) Query: 1 MPRILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDG 60 MP ILI++DD I+ L+ LE + DG G + + PDLI+LDLMLPK+DG Sbjct: 11 MPNILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDG 70 Query: 61 FTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLR 120 VC R+R+ + D +LMLTA G+ D+I G +GADDYL KPF E++ARVRALLR Sbjct: 71 LEVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRALLR 130 Query: 121 RTDRIPQAAKHSEILNQGPLTLVPERFEAIWF----GKSIKLTHLEFELLHCLLQRHGQT 176 R ++ Q +I + ++ +A + + ++LT LEF LL + G+ Sbjct: 131 R--QLRQGQPVGQIYRTNHFQVDLDQHQASRYQGDRQEELELTGLEFNLLATFMSYPGRV 188 Query: 177 VSPSDILREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTVYGAGYCLE 230 + + ++ ++WG + D + HIR LR K+EP+P P FIKTV G GY E Sbjct: 189 WNRTQLIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGYKFE 242 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 153 bits (387), Expect = 4e-40 Identities = 89/233 (38%), Positives = 135/233 (57%), Gaps = 7/233 (3%) Query: 3 RILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFT 62 RIL+++DD +++ ++ L Y V A D A +L+ DL++LD+MLP++DG T Sbjct: 2 RILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGIT 61 Query: 63 VCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLRRT 122 +CQ+ R +P+LM+TA I DKI G D+GADDY+ KP D+ E+ ARVRALLRR Sbjct: 62 LCQKWRSHSYL--MPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRRG 119 Query: 123 DRIPQAAKHSEILNQGPLTLVPERFEAIWFGKSIKLTHLEFELLHCLLQRHGQTVSPSDI 182 A +L GP+ L P +E + + + LT E+ +L LL+ + +S S I Sbjct: 120 -----CATCQPVLEWGPIRLDPSTYEVSYDNEVLSLTRKEYSILELLLRNGRRVLSRSMI 174 Query: 183 LREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTVYGAGYCLELSTEE 235 + +W E + +T++VH+R LR KL+ I+TV+G GY L TE+ Sbjct: 175 IDSIWKLESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGYRLANLTEK 227 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 151 bits (382), Expect = 2e-39 Identities = 87/227 (38%), Positives = 129/227 (56%), Gaps = 8/227 (3%) Query: 3 RILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFT 62 R+L+++++ ++ + + L+ GYDV A DG+KG A + PDLI+++ LP + G Sbjct: 4 RVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLE 63 Query: 63 VCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLRRT 122 +C+RLR E + IP++++TA +++++ G D+GADDY+ KPF+ +E AR+R LRRT Sbjct: 64 LCRRLR--EMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRRT 121 Query: 123 DRIPQAAKHSEILNQGPLTLVPERFEAIWFGKSIKLTHLEFELLHCLLQRHGQTVSPSDI 182 E+L L E + I LT EFELL LL Q ++ I Sbjct: 122 H-----TTSDEVLQFADLRFNRSTREIQRGDRLIDLTAKEFELLDYLLSHARQVLTREQI 176 Query: 183 LREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTVYGAGYCL 229 L VWGY+ D I V+IR+LR KLE PR I+TV G GY L Sbjct: 177 LERVWGYDFMGDSNIIEVYIRYLRLKLEA-AGEPRLIQTVRGVGYVL 222 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 142 bits (359), Expect = 8e-37 Identities = 89/235 (37%), Positives = 129/235 (54%), Gaps = 8/235 (3%) Query: 1 MPRILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDG 60 M IL++DD+ A+++ +S L G+ + A G G A+A+ Q DL++LD MLP+V G Sbjct: 1 MANILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSG 60 Query: 61 FTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLR 120 +C+++R + PVL LTA + D++ G D+G DDYL KPF++ E+LARVRALLR Sbjct: 61 LEICRQIRILGHST--PVLFLTAKDTLDDRVAGLDAGGDDYLIKPFELRELLARVRALLR 118 Query: 121 R-----TDRIPQAAKHSEILNQGPLTLVPERFEAIWFGKSIKLTHLEFELLHCLLQRHGQ 175 R T A + +L+ ++L A G+ I L+ E LL LQ GQ Sbjct: 119 RQSHGETITETLGAVKNNLLSVNNVSLDVANQVAYCQGQRIALSEKEVALLTLFLQAPGQ 178 Query: 176 TVSPSDILREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTVYGAGYCLE 230 +S +I +W E + +R LR K+E P PR I +VYG GYC E Sbjct: 179 ILSHEEIYSHLWPGESPPSSNVLAALVRLLRRKIE-QPNAPRLINSVYGKGYCFE 232 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 140 bits (352), Expect = 5e-36 Identities = 81/236 (34%), Positives = 130/236 (55%), Gaps = 19/236 (8%) Query: 3 RILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPD-------LIMLDLML 55 RIL+++D+ +I + + ++L+ GY+V DG AL + D LI+LD+ML Sbjct: 32 RILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIML 91 Query: 56 PKVDGFTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARV 115 P+V+G VC+ LR P+L+++A G +K+ G + GADDY+TKPF ++E++AR Sbjct: 92 PQVNGLDVCRSLRFGGDNT--PILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARC 149 Query: 116 RALLRRT----DRIPQAAKHSEILNQGPLTLVPERFEAIWFGKSIKLTHLEFELLHCLLQ 171 RA++RR + I K + L L P+ + G+ + L EF LL + Sbjct: 150 RAMIRRQGLAGNNIAPFRKFRD------LVLYPQECRVLMRGEEVSLAPKEFRLLELFMS 203 Query: 172 RHGQTVSPSDILREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTVYGAGY 227 + S ++ +WG + D +T+ VHIR LR KLE +P +P ++ TV G GY Sbjct: 204 YPRRVWSREQLIEHIWGIDFMGDSKTVDVHIRWLREKLEQDPSQPEYLVTVRGFGY 259 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 133 bits (335), Expect = 5e-34 Identities = 79/230 (34%), Positives = 137/230 (59%), Gaps = 6/230 (2%) Query: 1 MPRILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKG-QALAVQLQPDLIMLDLMLPKVD 59 M ++L++DDD +++L+S LE+ G+DV+ A +G++ Q L + L++LD+M+PK++ Sbjct: 1 MSKLLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKLNESYK--LVLLDVMMPKLN 58 Query: 60 GFTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALL 119 G + +R+ +++PV+MLTA G+ D++ G + GADD L KPF+ E++AR++A+L Sbjct: 59 GIETLKEIRK---VSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAIL 115 Query: 120 RRTDRIPQAAKHSEILNQGPLTLVPERFEAIWFGKSIKLTHLEFELLHCLLQRHGQTVSP 179 RR+ + EIL+ +TL A + +++ LT EF++L LL+ G VS Sbjct: 116 RRSASPSNNISNVEILSFDGITLHFSHGIATYNEENLNLTDYEFKILCLLLKSKGNVVSR 175 Query: 180 SDILREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTVYGAGYCL 229 ++ EV ++ +HI +LR KL +P + KT+ G GY L Sbjct: 176 EELSLEVMEKPLTPFDRSLDMHISNLRRKLPKRKNKPSWFKTLRGKGYAL 225 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 128 bits (322), Expect = 1e-32 Identities = 80/228 (35%), Positives = 126/228 (55%), Gaps = 14/228 (6%) Query: 3 RILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFT 62 RIL+I+DD I + + I L G+ V DG G A D ++LDL LPK+DG Sbjct: 2 RILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLE 61 Query: 63 VCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLRRT 122 V Q+ R + + D+PVL+LTA + ++++G SGADDYL KPF + E+ AR++AL+RR Sbjct: 62 VLQQWRSNHQ--DVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRR- 118 Query: 123 DRIPQAAKHSEILNQGPLTLVPERFEAIWF-GKSIKLTHLEFELLHCLLQRHGQTVSPSD 181 + H ++ Q + L + ++W + I LT E++LL + + +S S Sbjct: 119 ----RYGYHHSVIEQAGVKL-DQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSRSS 173 Query: 182 ILREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTVYGAGYCL 229 I ++ ++ + + VHI +LR KL +FI+TV+G GY L Sbjct: 174 IEEKLSSWDEEISSGALDVHIYNLRQKL-----GKQFIRTVHGVGYAL 216 >SYNE-PCC-01-000877 sll1330 Length = 250 Score = 118 bits (295), Expect = 2e-29 Identities = 77/226 (34%), Positives = 121/226 (53%), Gaps = 12/226 (5%) Query: 4 ILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFTV 63 I +++ +P + L+S +L+ +GY VQQ + + P L ++D L DG + Sbjct: 6 ISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGDGIEL 65 Query: 64 CQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLRRTD 123 C+ L + ++ + +L+A +D + G +GADDYLTKPF ++E LAR+ L+RR Sbjct: 66 CRWLYQQHQSM---IFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRRVR 122 Query: 124 RIPQAAKHSEILNQGPL--TLVPERFEAIWFGKSIKLTHLEFELLHCLLQRHGQTVSPSD 181 + +L+ G L LV R E + G + LT EF LL+ L Q G +S ++ Sbjct: 123 TVAAPL----LLDYGVLKIDLVQRRVE--YQGNFVDLTPQEFSLLYVLTQAEGSALSRTE 176 Query: 182 ILREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTVYGAGY 227 +LR W E D+ TI H+ LR K+E +PR+P I+TV GY Sbjct: 177 LLRRAWP-EAIDNPRTIDTHVLSLRKKIETDPRQPSLIQTVRNVGY 221 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 118 bits (295), Expect = 2e-29 Identities = 73/225 (32%), Positives = 122/225 (54%), Gaps = 7/225 (3%) Query: 3 RILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFT 62 +ILI++D+ AI +++++ L YDV +A D K ++ P LI+LD MLP G Sbjct: 4 KILIVEDECAIREMIALFLSQKYYDVIEASD-FKTAINKIKENPKLILLDWMLPGRSGIQ 62 Query: 63 VCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLRRT 122 Q +++ E A IP++MLTA +D I ++GADDY+TKPF + +LAR+ A+ RR Sbjct: 63 FIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWRRI 122 Query: 123 DRIPQAAKHSEILNQGPLTLVPERFEAIWFGKSIKLTHLEFELLHCLLQRHGQTVSPSDI 182 + S+ + L++ + + I L+ EF+LLH ++ + S + Sbjct: 123 -----YEQQSQFIQIDELSIDENAQRVFFQQQEINLSSTEFKLLHFFMRHPEKVYSREQL 177 Query: 183 LREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTVYGAGY 227 L +W + + + T+ +IR LR L P + +I+TV G+GY Sbjct: 178 LNRIWHNDLEVEYRTVDSYIRRLRRNLAPF-QCEHYIQTVRGSGY 221 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 115 bits (288), Expect = 1e-28 Identities = 78/230 (33%), Positives = 120/230 (52%), Gaps = 15/230 (6%) Query: 3 RILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQ--LQPDLIMLDLMLPKVDG 60 R+L+++D+P + + L Y V DG + Q + L + D M+P + G Sbjct: 2 RLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSG 61 Query: 61 FTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLR 120 +CQ+LR + +P+LMLTA QI D+++G D+GADDYL KPF + E+LAR+R+L R Sbjct: 62 LELCQKLRGQR--SSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAELLARLRSLQR 119 Query: 121 RTDRI-PQAAKHSE-ILNQGPLTLV-PERFEAIWFGKSIKLTHLEFELLHCLLQRHGQTV 177 R+ + PQ + + L+ G +V PE+ I LT EF+LL ++ Q + Sbjct: 120 RSPELQPQQLQVGQWWLDYGTFAVVTPEQ-------ARITLTAKEFQLLEYFMKHPQQIL 172 Query: 178 SPSDILREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTVYGAGY 227 S I ++W + + +R LR KLE I+TVYG GY Sbjct: 173 SSEQIKNQLWALSAESTSNVVAAQVRLLRRKLE-EYSHGNLIETVYGLGY 221 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 109 bits (272), Expect = 9e-27 Identities = 78/240 (32%), Positives = 124/240 (51%), Gaps = 18/240 (7%) Query: 3 RILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPD--LIMLDLMLPKVDG 60 RIL+++D+ + + L Y V DG + + L ++D +LP + G Sbjct: 2 RILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSG 61 Query: 61 FTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLR 120 +CQ+LR + +PVLMLTALG+ +++++G D+GADDYLTKPF + E+LAR+RAL R Sbjct: 62 LELCQKLRTQGNS--LPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAELLARLRALQR 119 Query: 121 RTDRIPQAAKHSEILNQGPLTLVP-ERFEAIWFG-------KSIKLTHLEFELLHCLLQR 172 R+ + +IL G +L P ++ + I LT EF++ L+Q Sbjct: 120 RSPQF-----QPQILTLGNFSLDPSNNLLSVTISEPLNLERQEIALTVREFQIFQYLMQN 174 Query: 173 HGQTVSPSDILREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTVYGAGYCLELS 232 + +S S I +++W + + + +R +R KL P IKTV G GY LS Sbjct: 175 PERIISGSKIRQQLWDLDEEPMSNVVAAQMRLIRRKL-AQQNCPCPIKTVPGQGYRFTLS 233 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 105 bits (263), Expect = 1e-25 Identities = 70/239 (29%), Positives = 115/239 (48%), Gaps = 26/239 (10%) Query: 2 PRILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGF 61 P+IL+++D+ + + E GYDV +A +G++ + +L+++D+ LP +G Sbjct: 4 PKILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGL 63 Query: 62 TVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLRR 121 + + LR + +P++ LT DKI G + GADDYLTKPF+ E+ R R LL R Sbjct: 64 LLARELREE---LSLPLIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHR 120 Query: 122 TDRIPQAAKHSEI-------------LNQGPLTLVPERFEAIWFGKSIKLTHLEFELLHC 168 +P K + LN L + PE G+ KL EF + Sbjct: 121 A--MPHQEKENTFGREFYRFNGWKLDLNSHSL-ITPE-------GQEFKLPRSEFRAMLH 170 Query: 169 LLQRHGQTVSPSDILREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTVYGAGY 227 + G+ + ++L+++ G E T+ V IR +R E +P P I T++G GY Sbjct: 171 FCENPGKLQTREELLKKMTGRELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGY 229 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 102 bits (254), Expect = 1e-24 Identities = 54/116 (46%), Positives = 71/116 (61%) Query: 4 ILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFTV 63 IL++DD ++S LE GY G + Q QPDLI+LDLM+P +DG V Sbjct: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQPDLILLDLMMPGMDGLEV 79 Query: 64 CQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALL 119 C RL++D +T DIPV+ LTA + QD +Q F GA DY+TKPF E+LARV+ L Sbjct: 80 CDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVKTHL 135 Score = 53.1 bits (126), Expect = 8e-10 Identities = 27/109 (24%), Positives = 60/109 (55%), Gaps = 1/109 (0%) Query: 4 ILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFTV 63 IL+ +D+ + + L+ GY V +G + + + D++++D+ +P++DG T Sbjct: 742 ILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTA 801 Query: 64 CQRLRRDERTADIP-VLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEM 111 + +RR + ++ P ++ +TA D+ + SG +DY++KP +E + Sbjct: 802 TEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKPIRLEAL 850 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 101 bits (251), Expect = 3e-24 Identities = 49/128 (38%), Positives = 83/128 (64%) Query: 4 ILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFTV 63 +L++DDDP + LV LE GY V A +G + L PD+I+ D+M+P++DG+ Sbjct: 10 LLLVDDDPNLLLLVKDYLEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAF 69 Query: 64 CQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLRRTD 123 +++R++ + IPV+ L+A GQ ++++G + GAD Y+ KPF+ EE+ A+V++ LR+ D Sbjct: 70 IEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQAD 129 Query: 124 RIPQAAKH 131 R+ Q H Sbjct: 130 RLLQHNNH 137 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 96.3 bits (238), Expect = 8e-23 Identities = 44/112 (39%), Positives = 71/112 (63%) Query: 4 ILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFTV 63 IL++DD P L+S L GY V+ G +PDLI+LD+ +P +DG+ V Sbjct: 11 ILLVDDLPNNLQLLSDLLINLGYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQV 70 Query: 64 CQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARV 115 C+ ++++E DIP++ ++ALG DK++ F+ G DY+TKPF +EE++AR+ Sbjct: 71 CEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQIEEVVARI 122 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 95.5 bits (236), Expect = 1e-22 Identities = 56/163 (34%), Positives = 95/163 (58%), Gaps = 13/163 (7%) Query: 1 MPRILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQAL--AVQLQPDLIMLDLMLPKV 58 M IL+++D+ I +L+ L + Y + +A +G L ++++ PDLI+ D+M+P++ Sbjct: 1 MSTILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEM 60 Query: 59 DGFTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRAL 118 DG + L+++ +TA IP + LTALG +QD +G +SGADDYL KPF E++L V + Sbjct: 61 DGHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSR 120 Query: 119 LRRTDRIP---QAAKHSEILNQ-------GPLTLVPERFEAIW 151 L++ ++ Q + S + + G TL P+ E IW Sbjct: 121 LQKQAKLSAFYQGSISSSLTERPRRSGTIGTPTLTPDEAE-IW 162 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 93.2 bits (230), Expect = 7e-22 Identities = 50/135 (37%), Positives = 77/135 (57%), Gaps = 1/135 (0%) Query: 4 ILIIDDDPAISDLVSINLEMAG-YDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFT 62 +L++DD+P + + V LE +G + V A + + P L++ D+M+P+VDG+ Sbjct: 58 LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGYQ 117 Query: 63 VCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLRRT 122 Q+LR D R +PV+ LTA G D+IQG+ +G D +L+KPFD +E+ A VR LL R Sbjct: 118 FLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLARQ 177 Query: 123 DRIPQAAKHSEILNQ 137 A S L + Sbjct: 178 QASSDAGSESAKLQE 192 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 90.5 bits (223), Expect = 4e-21 Identities = 39/120 (32%), Positives = 76/120 (63%) Query: 1 MPRILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDG 60 M +L+++D + +++S L+ G+ V A DG++ PDL++LD+++P+++G Sbjct: 27 MNAVLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNG 86 Query: 61 FTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLR 120 + VC+R++ D +T ++PV+M ++ G+ D+ G GAD Y+ KPF E++ ++ LLR Sbjct: 87 YEVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLLR 146 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 86.3 bits (212), Expect = 8e-20 Identities = 40/119 (33%), Positives = 73/119 (61%) Query: 1 MPRILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDG 60 M ++L+++D+ D++S L GY+V AVDG + +A+ P LI++D+ LP +DG Sbjct: 4 MAKVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDG 63 Query: 61 FTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALL 119 +T ++++ A IP++ LTA D+ + +G DDY TKP +++ +L ++ AL+ Sbjct: 64 WTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEALI 122 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 72.8 bits (177), Expect = 1e-15 Identities = 37/117 (31%), Positives = 67/117 (57%) Query: 3 RILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFT 62 +IL++DDD + + + L+ G+ V+ A +G + +++P++++LD ++P +DGF Sbjct: 13 KILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGFA 72 Query: 63 VCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALL 119 CQ L + + VLM+T L + F++GA DY+TKP + RV+ LL Sbjct: 73 CCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLL 129 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 63.5 bits (153), Expect = 6e-13 Identities = 33/111 (29%), Positives = 62/111 (55%) Query: 3 RILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFT 62 ++L++DD P L+ L G+ VQ+A +G AL P +I++D+ +P +DG + Sbjct: 419 KVLVVDDRPESRLLLRQLLTSLGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRS 478 Query: 63 VCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLA 113 Q+++ + ++ LTA ++ + +G DD+L+KPF EE++A Sbjct: 479 TTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIA 529 >SYNE-PCC-01-000608 sll0921 Length = 222 Score = 60.5 bits (145), Expect = 5e-12 Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 12/222 (5%) Query: 3 RILIIDDDPAISDLV--SINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDG 60 RI +I+D+ I + ++ +E + V +A +G G + Q +PD++++D+ LP ++G Sbjct: 5 RIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNG 64 Query: 61 FTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLR 120 V Q+L++ V++LT Q + + F +GAD Y K E ++ ++A Sbjct: 65 IDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQATHG 124 Query: 121 RTDRIPQAAKHSEILNQGPLTLVPERFEAIWFGKSIKLTHLEFELLHCLLQRHGQTVSPS 180 I A +L P E S LT E E+L ++ S + Sbjct: 125 GFAWIDPAIARI-VLAHAPGAEPSEPSSPSRTSLSYGLTERELEVLQLIV----DGCSNA 179 Query: 181 DILREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTV 222 DI +++ + T++ H+R++ KL N R ++ + Sbjct: 180 DIAEKLY-----ITVGTVKTHVRNILNKLCANDRTQAAVRAI 216 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 56.2 bits (134), Expect = 9e-11 Identities = 28/102 (27%), Positives = 55/102 (53%) Query: 4 ILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFTV 63 IL+++D+ + L G VQ A +G + L D I++D+ +P ++G+ Sbjct: 720 ILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYDA 779 Query: 64 CQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKP 105 + +R+ E ++P++ +TA D+ + D+G +D+LTKP Sbjct: 780 TRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKP 821 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 55.5 bits (132), Expect = 2e-10 Identities = 28/109 (25%), Positives = 60/109 (55%) Query: 3 RILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFT 62 RIL+++D+ ++ + L G++V A +G+ L+++D+ +P++DG Sbjct: 926 RILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIE 985 Query: 63 VCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEM 111 +R++ R A +P++ +TA D+ + +G +D+L KP + EE+ Sbjct: 986 ATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEEL 1034 Score = 40.0 bits (92), Expect = 7e-06 Identities = 29/145 (20%), Positives = 60/145 (41%), Gaps = 5/145 (3%) Query: 3 RILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPD-----LIMLDLMLPK 57 R+L++DD+ ++ LE + V+ G + + + ++ +D +P Sbjct: 772 RVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPN 831 Query: 58 VDGFTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRA 117 +DG V +RL+ + ++TA G+ + ++ G DD L KP + + Sbjct: 832 MDGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISPSVLFDSLAR 891 Query: 118 LLRRTDRIPQAAKHSEILNQGPLTL 142 +L + Q + S + L L Sbjct: 892 VLGDPTALAQEMRQSSGIGAEDLAL 916 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 55.5 bits (132), Expect = 2e-10 Identities = 30/104 (28%), Positives = 56/104 (53%) Query: 3 RILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFT 62 +IL++DD L+ L G+++++A +G + AL +P LI +D+ +P +DG+ Sbjct: 631 KILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYE 690 Query: 63 VCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPF 106 + ++ + V+ LTA ++K +G DD+L KPF Sbjct: 691 ATKYIKGQVKGNATAVVALTASVLEEEKAIVLSAGCDDFLRKPF 734 >HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator protein (narP) Length = 208 Score = 55.5 bits (132), Expect = 2e-10 Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 33/218 (15%) Query: 3 RILIIDDDP----AISDLVSI--NLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLP 56 ++L+IDD P I LV + N E+ DV +GI ++A+Q PD+I+LDL + Sbjct: 6 KVLLIDDHPLMRRGIKQLVELDDNFEVVA-DVSSGTEGI---SVALQTSPDVIILDLNMK 61 Query: 57 KVDGFTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVR 116 + G + LR + D +L+LT D D+GAD YL K + + +L +++ Sbjct: 62 GLSGLDTLKGLRAEG--VDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIK 119 Query: 117 ALLRRTDRIPQAAKHSEILNQGPLTLVPERFEAIWFGKSIKLTHLEFELLHCLLQRHGQT 176 + A+ IL+ L+ ER LT E +L + Sbjct: 120 RI----------AQGEVILSDSIKNLLLERTHED--NPLDSLTDREMGVLRQI----ATG 163 Query: 177 VSPSDILREVWGYEPDDDIETIRVHIRHLRTKLEPNPR 214 +S I +++ E ET++VHIR+L KL + R Sbjct: 164 LSNKQIAAQLFISE-----ETVKVHIRNLLRKLNVHSR 196 >SYNE-PCC-01-001575 slr0312 Length = 209 Score = 51.6 bits (122), Expect = 2e-09 Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 4/126 (3%) Query: 3 RILIIDDDPAISDLVS--INLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDG 60 R+LI DD ++ IN + + QA +G + AL + QPD+ ++DL +P+V+G Sbjct: 8 RVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPEVEG 67 Query: 61 FTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLR 120 + + A I ++LT +D +G +GA YL K + +E+L +R + R Sbjct: 68 VAAISAICAIVKFARI--IVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHR 125 Query: 121 RTDRIP 126 IP Sbjct: 126 GQKYIP 131 >SYNE-PCC-01-002221 slr1213 Length = 241 Score = 50.4 bits (119), Expect = 5e-09 Identities = 31/115 (26%), Positives = 61/115 (53%), Gaps = 5/115 (4%) Query: 3 RILIIDDDPAISDLVSINLEMAGYDVQQ-AVDGIKGQALAVQLQPDLIMLDLMLP-KVDG 60 +ILI++D+ ++ ++ L+ GY++ A DG + PDL++LD+ + ++DG Sbjct: 4 KILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEIDG 63 Query: 61 FTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARV 115 V +R++ IP++ LTA + + + Y+ KPF E++L+ V Sbjct: 64 IEVAERIKS---LYSIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTV 115 >SYNE-PCC-01-001160 sll1708 Length = 226 Score = 50.4 bits (119), Expect = 5e-09 Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 12/121 (9%) Query: 3 RILIIDDDPAISDLVSINLEMA-----GYDVQQAVD-GIKGQALAVQLQPDLIMLDLMLP 56 +ILI++DDP L+ + LE A +++ VD G A L PDLI++D+ LP Sbjct: 18 KILIVEDDP----LMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLP 73 Query: 57 KVDGFTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVR 116 +DG ++++ + + I +++LT+ + I SGAD Y K +E ++ + Sbjct: 74 GLDGIEATKQIK--QTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIA 131 Query: 117 A 117 A Sbjct: 132 A 132 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 49.3 bits (116), Expect = 1e-08 Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 9/148 (6%) Query: 3 RILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFT 62 +IL+ +D+ + L GY V A +G + + DL+++D+ +P +DG T Sbjct: 1191 QILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGIT 1250 Query: 63 VCQRLRRDERTADIP-VLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLRR 121 C+ +R+ P ++ +TA D+ + D+G D Y++KP + ++ R +L+ Sbjct: 1251 ACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQL----RKVLQD 1306 Query: 122 TDRI---PQAAKHSEILNQGPLTLVPER 146 T + PQA + L +T+V E+ Sbjct: 1307 TSALITSPQAREDIVTLGD-KITVVEEQ 1333 >SYNE-PCC-01-002778 slr1969 Length = 750 Score = 46.2 bits (108), Expect = 1e-07 Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 2/115 (1%) Query: 4 ILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFTV 63 +++I+ D I+ L+ L +A Y V +D LQP LI++D VD V Sbjct: 632 VIVIEQDEEIATLICELLTVANYQVIWLIDTTNALQQVELLQPGLIIVDGDF--VDVTEV 689 Query: 64 CQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRAL 118 + +++ R + + V +L+ + G DDYL KP E +L RV+++ Sbjct: 690 TRGIKKSRRISKVTVFLLSESLSSAEWQALSQKGIDDYLLKPLQPELLLQRVQSI 744 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.322 0.142 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,954 Number of Sequences: 78 Number of extensions: 1021 Number of successful extensions: 84 Number of sequences better than 1.0e-05: 33 Number of HSP's better than 0.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 9 Number of HSP's gapped (non-prelim): 39 length of query: 241 length of database: 48,235 effective HSP length: 60 effective length of query: 181 effective length of database: 43,555 effective search space: 7883455 effective search space used: 7883455 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 91 (39.7 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-001509 slr0210 (417 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-001509 slr0210 817 0.0 SYNE-PCC-01-000295 sll0474 156 1e-40 SYNE-PCC-01-001280 sll1871 140 7e-36 SYNE-PCC-01-002879 slr2104 135 2e-34 SYNE-PCC-01-000800 sll1228 132 2e-33 SYNE-PCC-01-000891 sll1353 130 8e-33 SYNE-PCC-01-002873 slr2098 130 1e-32 SYNE-PCC-01-001294 sll1888 129 2e-32 SYNE-PCC-01-002617 slr1759 127 5e-32 SYNE-PCC-01-002778 slr1969 121 5e-30 SYNE-PCC-01-001517 slr0222 120 1e-29 SYNE-PCC-01-001306 sll1905 113 1e-27 SYNE-PCC-01-001132 sll1672 106 1e-25 SYNE-PCC-01-000985 sll1475 101 5e-24 SYNE-PCC-01-001690 slr0473 86 2e-19 >SYNE-PCC-01-001509 slr0210 Length = 417 Score = 817 bits (2110), Expect = 0.0 Identities = 405/417 (97%), Positives = 405/417 (97%) Query: 1 MGSNFPNRKSLQTAGDGFEQSIARLIASMIPVQEIYYWRLGASXXXXXXXXXXXXLSMAF 60 MGSNFPNRKSLQTAGDGFEQSIARLIASMIPVQEIYYWRLGAS LSMAF Sbjct: 1 MGSNFPNRKSLQTAGDGFEQSIARLIASMIPVQEIYYWRLGASPETPEIIEIIPTLSMAF 60 Query: 61 QTGHSPWPMAEKCLKFIGDRQGDLQRGKSLLTDLKQHWQEITSASFDSGAVQANTNDDLP 120 QTGHSPWPMAEKCLKFIGDRQGDLQRGKSLLTDLKQHWQEITSASFDSGAVQANTNDDLP Sbjct: 61 QTGHSPWPMAEKCLKFIGDRQGDLQRGKSLLTDLKQHWQEITSASFDSGAVQANTNDDLP 120 Query: 121 YFFLPVFQQNQYVGGICLVWPHSQWRLEQYLFLQEVGNVFTYQYHGESETISPQKSFNGG 180 YFFLPVFQQNQYVGGICLVWPHSQWRLEQYLFLQEVGNVFTYQYHGESETISPQKSFNGG Sbjct: 121 YFFLPVFQQNQYVGGICLVWPHSQWRLEQYLFLQEVGNVFTYQYHGESETISPQKSFNGG 180 Query: 181 DRHTSMTINLSHIHHEFRTPLTAIIGFARMLRDELYGKLNPKQHQYVQGTLNSAEHLLSL 240 DRHTSMTINLSHIHHEFRTPLTAIIGFARMLRDELYGKLNPKQHQYVQGTLNSAEHLLSL Sbjct: 181 DRHTSMTINLSHIHHEFRTPLTAIIGFARMLRDELYGKLNPKQHQYVQGTLNSAEHLLSL 240 Query: 241 VNDFLDLSKIDARCEELFYEQVAVEDLCLAVISMVQTKAKEKQLALNLTIDDGVDFCYVD 300 VNDFLDLSKIDARCEELFYEQVAVEDLCLAVISMVQTKAKEKQLALNLTIDDGVDFCYVD Sbjct: 241 VNDFLDLSKIDARCEELFYEQVAVEDLCLAVISMVQTKAKEKQLALNLTIDDGVDFCYVD 300 Query: 301 QRRWKQILINLLSNGVKFTPKGSVTLAVKATDKALIFSVIDTGIGIDPEDQRDLFQPFKQ 360 QRRWKQILINLLSNGVKFTPKGSVTLAVKATDKALIFSVIDTGIGIDPEDQRDLFQPFKQ Sbjct: 301 QRRWKQILINLLSNGVKFTPKGSVTLAVKATDKALIFSVIDTGIGIDPEDQRDLFQPFKQ 360 Query: 361 ISHPPSFAEKGTGLGLALSRRLAQLHGGDIQLTSTPGVGSCFSAILPLKTSVKNYQT 417 ISHPPSFAEKGTGLGLALSRRLAQLHGGDIQLTSTPGVGSCFSAILPLKTSVKNYQT Sbjct: 361 ISHPPSFAEKGTGLGLALSRRLAQLHGGDIQLTSTPGVGSCFSAILPLKTSVKNYQT 417 >SYNE-PCC-01-000295 sll0474 Length = 806 Score = 156 bits (395), Expect = 1e-40 Identities = 92/229 (40%), Positives = 135/229 (58%), Gaps = 11/229 (4%) Query: 190 LSHIHHEFRTPLTAIIGFARMLRDELYGKLNPKQHQYVQGTLNSAEHLLSLVNDFLDLSK 249 L+++ HE RTPL +I+G L++++YG LN KQ Q ++ NS HLLSL+ND LDLSK Sbjct: 422 LANMSHELRTPLNSILGMIETLQNQVYGPLNGKQVQSLEIVENSGRHLLSLINDILDLSK 481 Query: 250 IDARCEELFYEQVAVEDLCLAVISMVQTKAKEKQLALNLTIDDGVDFCYVDQRRWKQILI 309 I+A +L +V L ++ VQ A +KQ+ L+ I + VD+RR Q+LI Sbjct: 482 IEAGRMDLDLNPTSVSALVNHSLTFVQQFAIQKQINLSSEIIPNLPDVLVDKRRLCQVLI 541 Query: 310 NLLSNGVKFTPKGSVTLA----VKATDK-------ALIFSVIDTGIGIDPEDQRDLFQPF 358 NLL+N +KFTP+G + +K K L F+V DTGIGI+ + ++F+PF Sbjct: 542 NLLNNAIKFTPEGGKVVVQADLIKEQGKENSQSPPQLSFTVFDTGIGIEADRLNNIFEPF 601 Query: 359 KQISHPPSFAEKGTGLGLALSRRLAQLHGGDIQLTSTPGVGSCFSAILP 407 QI + GTGLGL+L +++ +LHGG + +TS GS F +P Sbjct: 602 VQIDSALNRRYDGTGLGLSLVKKIVELHGGSVTVTSKLNEGSRFKITIP 650 >SYNE-PCC-01-001280 sll1871 Length = 674 Score = 140 bits (353), Expect = 7e-36 Identities = 88/229 (38%), Positives = 128/229 (55%), Gaps = 4/229 (1%) Query: 183 HTSMTINLSHIHHEFRTPLTAIIGFARMLRDELYGKLNPKQHQYVQGTLNSAEHLLSLVN 242 + + +I L+++ HE RTPL AIIG++ ML +E + + + L S + LL+L+N Sbjct: 435 NATKSIFLANMSHELRTPLNAIIGYSEMLIEEAEDLDSEELVPDLDKILRSGKSLLALIN 494 Query: 243 DFLDLSKIDARCEELFYEQVAVEDLCLAVISMVQTKAKEKQLALNLTIDDGVDFCYVDQR 302 D LD+SKI+A EL+ E +++L ++ + K L + I + Y D Sbjct: 495 DLLDISKIEAGKMELYLETFNLKELIAGILDTISPLLKNNNNKLEVEISLESEEVYGDLI 554 Query: 303 RWKQILINLLSNGVKFTPKGSVTLAV---KATDKA-LIFSVIDTGIGIDPEDQRDLFQPF 358 + +Q ++NLLSN KFT G ++ V K +K L F V DTGIG+ E LFQPF Sbjct: 555 KLRQGILNLLSNASKFTKDGIISFIVEEFKVDEKDWLSFQVKDTGIGLTEEQMSKLFQPF 614 Query: 359 KQISHPPSFAEKGTGLGLALSRRLAQLHGGDIQLTSTPGVGSCFSAILP 407 Q + GTGLGLA++R+ Q+ GGDI LTS GVGS F+ LP Sbjct: 615 TQADSSTTRKYGGTGLGLAITRKFCQMMGGDIYLTSEIGVGSSFTIKLP 663 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 135 bits (341), Expect = 2e-34 Identities = 91/228 (39%), Positives = 129/228 (56%), Gaps = 9/228 (3%) Query: 190 LSHIHHEFRTPLTAIIGFARMLRDELYGKLNPKQHQYVQGTLNSAEHLLSLVNDFLDLSK 249 L+++ HE RTP+ AIIG + ++ L L +Q Y+Q + E LL ++N+ LD SK Sbjct: 462 LANMSHEIRTPMNAIIGMSELV---LQTDLTSQQRNYLQKVQYAGELLLGIINNILDFSK 518 Query: 250 IDARCEELFYEQVAVEDLCLAVISMVQTKAKEKQLALNLTIDDGVDFCYV-DQRRWKQIL 308 ++A EL + +VE++ + S++ +A+ K L LN +D + V D+ R QIL Sbjct: 519 MEAGKLELEQKPFSVEEVMGNLHSILGIQAEAKGLTLNFHLDPRIPPILVGDRLRLSQIL 578 Query: 309 INLLSNGVKFTPKGSVT-----LAVKATDKALIFSVIDTGIGIDPEDQRDLFQPFKQISH 363 INL +N VKFT +G +T L + L FSV DTGIG+ P+ Q LFQ F Q Sbjct: 579 INLGNNAVKFTNQGEITIRGQLLKTENEQTKLQFSVTDTGIGLTPDQQSKLFQWFNQGET 638 Query: 364 PPSFAEKGTGLGLALSRRLAQLHGGDIQLTSTPGVGSCFSAILPLKTS 411 S GTGLGLA+S+ L +L GGDI L S G GS F + L T+ Sbjct: 639 STSRQYGGTGLGLAISKSLTELMGGDIWLESVVGQGSTFHFTVCLGTA 686 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 132 bits (332), Expect = 2e-33 Identities = 105/302 (34%), Positives = 154/302 (50%), Gaps = 21/302 (6%) Query: 124 LPVFQQNQYVGGICLVWPHSQ--WRLEQYLFLQEVGNVFTY-QYHGESETISPQKSFNGG 180 +P+ + Q +G I +V H W E+ + VG Q ++ET Q Sbjct: 98 VPMVKDAQVLGYISMVHLHDNYGWNPEELNLAKLVGQFLAIAQARHQAETTLTQAKEAAD 157 Query: 181 DRHTSMTINLSHIHHEFRTPLTAIIGFARMLRDELYGKLNPKQHQYVQGTLN-SAEHLLS 239 + + T L+ I HE RTPL AIIGF+++L + L P H+ +N S EHLL Sbjct: 158 AANRAKTEFLASISHELRTPLNAIIGFSQLLHRD--PSLAP--HRPTLDIINRSGEHLLE 213 Query: 240 LVNDFLDLSKIDARCEELFYEQVAVEDLCLAVISMVQTKAKEKQLALNLTIDDGV-DFCY 298 L+ND L++SKI+A L + + L + ++ Q +A+EKQL L + V ++ Sbjct: 214 LINDILEMSKIEAGRTTLNEKIIDCHRLLDNLQALFQLRAQEKQLLLKVERSPEVPEWIK 273 Query: 299 VDQRRWKQILINLLSNGVKFTPKGSVTLAVKA-----TDKA------LIFSVIDTGIGID 347 D + +Q+LINLL+N +KFT +G VTL VK TD+ L F V DTG GI Sbjct: 274 TDGGKLRQVLINLLANAIKFTAQGGVTLKVKCLTAPQTDEGQGASIWLHFLVSDTGPGIA 333 Query: 348 PEDQRDLFQPFKQISHPPSFAEKGTGLGLALSRRLAQLHGGDIQLTSTPGVGSCFSAILP 407 + +LF PF Q + G GLGL +S++ QL GG IQ+ S GS F +P Sbjct: 334 AHEMDELFVPFAQTETGLKSCQ-GNGLGLPISQKFVQLMGGQIQVRSKVDQGSAFFFAIP 392 Query: 408 LK 409 ++ Sbjct: 393 VQ 394 >SYNE-PCC-01-000891 sll1353 Length = 998 Score = 130 bits (327), Expect = 8e-33 Identities = 86/235 (36%), Positives = 127/235 (54%), Gaps = 12/235 (5%) Query: 190 LSHIHHEFRTPLTAIIGFARMLRDELYGKLNPKQHQYVQGTLNSAEHLLSLVNDFLDLSK 249 L++I HE RTP+ AI+GF +L + K+ Y+ +S++ LL+L++D LD+SK Sbjct: 604 LANISHEIRTPMNAILGFCDLLLQKDLSLSQTKK--YLNAIGSSSKILLALIDDILDISK 661 Query: 250 IDARCEELFYEQVAVEDLCLAVISMVQTKAKEKQLALNLTIDDGVDFC-YVDQRRWKQIL 308 I+A + E V + + + + KA+ K L L + ID+ ++ Y D R +QIL Sbjct: 662 IEAGKLVIHLEPVDLRVIIREIKQIFDYKAESKSLLLTIQIDETLNQAIYFDAVRLRQIL 721 Query: 309 INLLSNGVKFTPKGSVTLAV---------KATDKALIFSVIDTGIGIDPEDQRDLFQPFK 359 NL+ N +KFT +G V + + + T +L V DTGIGI PEDQ +F F Sbjct: 722 FNLVGNALKFTEEGQVFIYIGVEGIQVRSQGTYISLAIEVTDTGIGIAPEDQAKIFDVFT 781 Query: 360 QISHPPSFAEKGTGLGLALSRRLAQLHGGDIQLTSTPGVGSCFSAILPLKTSVKN 414 Q + GTGLGL ++RRL L GG+I L+S G GS F P V+N Sbjct: 782 QSQGQSTRKYGGTGLGLTITRRLTALLGGEISLSSRLGEGSTFILHFPAVRLVEN 836 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 130 bits (326), Expect = 1e-32 Identities = 84/228 (36%), Positives = 125/228 (54%), Gaps = 9/228 (3%) Query: 190 LSHIHHEFRTPLTAIIGFARMLRDELYGKLNPKQHQYVQGTLNSAEHLLSLVNDFLDLSK 249 L+++ HE RTP+ A+IG + L L P+Q +Y+ S +HLL ++ND LD SK Sbjct: 531 LANMSHEIRTPMNAVIGMTHLA---LKTDLTPRQREYLHKIRFSGQHLLGVINDILDFSK 587 Query: 250 IDARCEELFYEQVAVEDLCLAVISMVQTKAKEKQLALNLTIDDGVDFCYV-DQRRWKQIL 308 I+A + ++ + V +++ KA K L L ID + ++ D R QIL Sbjct: 588 IEAGKLPMESIDFDLDKVLDNVATLISEKATNKGLELLFDIDRNLPRHFIGDPLRLGQIL 647 Query: 309 INLLSNGVKFTPKGSVTLAVKAT-----DKALIFSVIDTGIGIDPEDQRDLFQPFKQISH 363 IN +N VKFT +G +T+ V+ D L +V DTGIGI PE +LF F+Q Sbjct: 648 INYANNAVKFTEQGDITIVVRLQEYRDQDVVLYLAVKDTGIGIKPEHIANLFNSFQQADS 707 Query: 364 PPSFAEKGTGLGLALSRRLAQLHGGDIQLTSTPGVGSCFSAILPLKTS 411 + GTGLGLA+ +R+A+L GG++ + S G GS F A + L+ S Sbjct: 708 STTRNFGGTGLGLAICKRIAELMGGEVGVESEYGQGSTFWAKVCLQKS 755 >SYNE-PCC-01-001294 sll1888 Length = 432 Score = 129 bits (324), Expect = 2e-32 Identities = 96/305 (31%), Positives = 153/305 (50%), Gaps = 35/305 (11%) Query: 129 QNQYVGGICLVWPHSQWRLEQYLFLQEVGNVFTYQYHGESETISPQKSFNGGDRHTSMTI 188 Q + +GG+ + Q + YL LQ+VG +H E+E + + + G T+ Sbjct: 118 QGEDLGGLWIFPTLYQDQANGYLCLQQVGPA-PGPWHPETEALLQELAEQTGTAIAHATL 176 Query: 189 N--------------------LSHIHHEFRTPLTAIIGFARMLRDELYGKLNPKQHQYVQ 228 L+ HE RTPL IIGF R++ D++ ++H++V+ Sbjct: 177 YQELTQATKAAEEASRLKSEFLASTTHELRTPLNGIIGFLRLILDDMADS-EAEKHEFVE 235 Query: 229 GTLNSAEHLLSLVNDFLDLSKIDARCEELFYEQVAVEDLCLAVISMVQTKAKEKQLALNL 288 SA LL+L+ND LDL+KI+A + E V ++ A + +A+ K L+ NL Sbjct: 236 EAYQSALLLLNLINDILDLAKIEAGRVGIELEVVDFSEVLQATENFALPQAQNKGLSFNL 295 Query: 289 TI-DDGVDFCYVDQRRWKQILINLLSNGVKFTPKGSVTLAVKATDKALIF---------- 337 T + G Y +QR Q+++N++ N +KFT +G +T+AV+ + +++ Sbjct: 296 TAPNQGPLLVYGNQRWLLQVMLNIVGNAIKFTHEGGITVAVEVMPRTVLWEGVQKPGLLK 355 Query: 338 -SVIDTGIGIDPEDQRDLFQPFKQISHPPSFAEKGTGLGLALSRRLAQLHGGDIQLTST- 395 SV DTGIG+ E Q LF+ F QI S A GTGLGL +S++L + GG + S Sbjct: 356 VSVGDTGIGVSLEQQSKLFKKFVQIDGSHSKAYGGTGLGLVISQKLVETMGGKVAFFSMG 415 Query: 396 PGVGS 400 G+GS Sbjct: 416 EGLGS 420 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 127 bits (320), Expect = 5e-32 Identities = 87/231 (37%), Positives = 118/231 (51%), Gaps = 21/231 (9%) Query: 190 LSHIHHEFRTPLTAIIGFARMLRDELYGKLNPKQHQYVQGTLNSAEHLLSLVNDFLDLSK 249 L+ + HE RTP+ +IG +L + LN +Q YVQ S E LL+++ND LD SK Sbjct: 782 LAMMSHEIRTPMNGVIGMTELL---IMTDLNLQQLDYVQTIRQSGETLLTIINDILDFSK 838 Query: 250 IDARCEELFYEQVAVEDLCLAVISMVQTKAKEKQLALNLTIDDGVDFCYV-DQRRWKQIL 308 I+A L + + L V+ M A+ K L L ID + DQ R +QIL Sbjct: 839 IEADKLVLETQAFELRPLIETVLEMFGPIARAKHLELTYGIDPQTPARILGDQVRLRQIL 898 Query: 309 INLLSNGVKFTPKGSVTLAVKAT-----------------DKALIFSVIDTGIGIDPEDQ 351 NL+ N +KFT KG V L VK + F++ DTGIGI + Q Sbjct: 899 SNLIGNALKFTEKGEVVLTVKGEPFDPAESYHTILNLPHPSHRICFNLRDTGIGIPLDRQ 958 Query: 352 RDLFQPFKQISHPPSFAEKGTGLGLALSRRLAQLHGGDIQLTSTPGVGSCF 402 LF+ F Q+ + GTGLGL +S+RL Q+ GG + +TS PGVGS F Sbjct: 959 DRLFKSFSQVDSSTTRKYGGTGLGLVISQRLTQMMGGVLTVTSEPGVGSNF 1009 >SYNE-PCC-01-002778 slr1969 Length = 750 Score = 121 bits (303), Expect = 5e-30 Identities = 84/225 (37%), Positives = 126/225 (56%), Gaps = 8/225 (3%) Query: 190 LSHIHHEFRTPLTAIIGF-ARMLR--DELYGKLNPKQHQYVQGTLNSAEHLLSLVNDFLD 246 +++I HE RTPLT+IIG A +LR D KQ Y+ + + LL +N + Sbjct: 383 INNISHELRTPLTSIIGLSATLLRWFDHPASLPPAKQQYYLLNIQENGKKLLDQINSIIQ 442 Query: 247 LSKIDARCEELFYEQVAVEDLCLAVISMVQTKAKEKQLALNLT--IDDGVDFCYVDQRRW 304 LS++++ L + ++ L VI + A ++Q+ L L I+ G D DQ R Sbjct: 443 LSQLESGQTALNCQSFSLHTLAQTVIHSLLGVAIKQQINLELDYQINVGQDQFCADQERL 502 Query: 305 KQILINLLSNGVKFTP-KGSVTLAVKATDKALIFSVIDTGIGIDPEDQRDLFQPFKQISH 363 QIL LL+N +KFTP +G+V L + IF V DTGIGI+ + LF+ FK Sbjct: 503 DQILTQLLNNALKFTPAEGTVILRIWKESNQAIFQVEDTGIGINEQQLPVLFEAFKVAGD 562 Query: 364 P-PSFAEKGTGLGLALSRRLAQLHGGDIQLTSTPGVGSCFSAILP 407 SF E G G+GLAL+++L +LHGG I++ S+PG G+ F+ ++P Sbjct: 563 SYTSFYETG-GVGLALTKQLVELHGGYIEVESSPGQGTIFTTVIP 606 >SYNE-PCC-01-001517 slr0222 Length = 1178 Score = 120 bits (300), Expect = 1e-29 Identities = 76/218 (34%), Positives = 115/218 (52%), Gaps = 5/218 (2%) Query: 193 IHHEFRTPLTAIIGFARMLRDELYGKLNPKQHQYVQGTLNSAEHLLSLVNDFLDLSKIDA 252 + HEFRTPLT+IIGF +L K+ QY+ NS++ L L++D L +S+ DA Sbjct: 947 VSHEFRTPLTSIIGFGELLSKYFDRLSTEKKQQYINNIQNSSQRLKQLIDDVLSISRYDA 1006 Query: 253 RCEELFYEQVAVEDLCLAVISMVQT-KAKEKQLALNLTIDDGVDFCYVDQRRWKQILINL 311 E+ + + +L +I E LN + + VD R + IL N+ Sbjct: 1007 NKIEIELGNINLRNLANDLIENFSCGLGSEHNFELNYHLKPD-EHSLVDVRLLRHILENI 1065 Query: 312 LSNGVKFTPKGS-VTLAVKATDKALIFSVIDTGIGIDPEDQRDLFQPFKQISHPPSFAEK 370 LSN +K++ GS +TL + ++ L+F V D GIGI +DQ LF+ F + S+ Sbjct: 1066 LSNAIKYSAPGSTITLDISKDEEHLLFQVRDEGIGIPLQDQEKLFEAFHRASNVGDI--P 1123 Query: 371 GTGLGLALSRRLAQLHGGDIQLTSTPGVGSCFSAILPL 408 GTGLGL++ +R + GG I++ S PG G+ LPL Sbjct: 1124 GTGLGLSIVKRYVEFQGGTIEVISMPGKGTTMVIKLPL 1161 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 113 bits (283), Expect = 1e-27 Identities = 81/209 (38%), Positives = 107/209 (51%), Gaps = 11/209 (5%) Query: 190 LSHIHHEFRTPLTAIIGFARMLRDELYGKLNPKQHQYVQGTLNSAEHLLSLVNDFLDLSK 249 L+ + HE RTP+ AIIG +L D L +Q + Q NS E LL+L+ND LD SK Sbjct: 325 LATMSHEIRTPMNAIIGMTGLLLDT---DLTTQQKYFAQTIRNSGETLLTLINDILDFSK 381 Query: 250 IDARCEELFYEQVAVEDLCLAVISMVQTKAKEKQLALNLTIDDGVD-FCYVDQRRWKQIL 308 I+A +L + + +V A++K L L + D R +QIL Sbjct: 382 IEAGKLDLEVYPFDLGQCLEEALDVVVPSARQKSLTLIRRFLTPIPPNLQGDVTRLRQIL 441 Query: 309 INLLSNGVKFTPKGSVTLAVKATDK-------ALIFSVIDTGIGIDPEDQRDLFQPFKQI 361 +NLLSN VKFT G V + V+ D + F+V DTGIGI P Q+ LFQ F Q Sbjct: 442 VNLLSNAVKFTEAGQVKVTVEVVDHDAAKGEYQICFAVQDTGIGIAPNQQQALFQAFSQG 501 Query: 362 SHPPSFAEKGTGLGLALSRRLAQLHGGDI 390 + + GTGLGLA+ RL L GG I Sbjct: 502 NSSITRRFGGTGLGLAICVRLTALMGGTI 530 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 106 bits (265), Expect = 1e-25 Identities = 79/234 (33%), Positives = 123/234 (52%), Gaps = 24/234 (10%) Query: 190 LSHIHHEFRTPLTAIIGFAR-MLRDELYGKLNPKQHQYVQGTLNSAEHLLSLVNDFLDLS 248 ++++ HE R+PL AIIGF++ MLR + L +Q++ S E+LL+L+N+ LD S Sbjct: 369 VANMSHELRSPLNAIIGFSQLMLRTK---NLPMEQYENAGIIQRSGEYLLNLINNILDFS 425 Query: 249 KIDARCEELFYEQVAVEDLCLAVISMVQTKAKEKQLALNLTIDDGVD-FCYVDQRRWKQI 307 KI+A L + L + M+ KA + + L D + + Y D+ + +QI Sbjct: 426 KIEAGKTHLNRHNFDLYLLLDDLEDMLHLKAANEGIELIFIRDHDLPRYVYGDEIKLRQI 485 Query: 308 LINLLSNGVKFTPKGSVTLAVKATDKA------------------LIFSVIDTGIGIDPE 349 L+NLLSN +KFT +G V L + L F++ DTG GI Sbjct: 486 LLNLLSNAIKFTTEGEVVLTSNFRNAEQQEVINPETSTEPKNKYWLDFTIKDTGKGISEV 545 Query: 350 DQRDLFQPFKQISHPPSFAEKGTGLGLALSRRLAQLHGGDIQLTSTPGVGSCFS 403 + LF+ F Q + A++GTGLGLA++R+ +L GGDI ++S G+ FS Sbjct: 546 ELSHLFEAFSQTESGRN-AQEGTGLGLAITRQFIKLMGGDINVSSVVDQGTTFS 598 >SYNE-PCC-01-000985 sll1475 Length = 297 Score = 101 bits (251), Expect = 5e-24 Identities = 66/214 (30%), Positives = 113/214 (52%), Gaps = 5/214 (2%) Query: 195 HEFRTPLTAIIGFARMLRDELYGKLNP-KQHQYVQGTLNSAEHLLSLVNDFLDLSKIDAR 253 HEFRTPL+ + A++L + L+P K+ + + NS ++++ L++D L +++ +A Sbjct: 78 HEFRTPLSTALAAAQLLENSEVAWLDPDKRSRNLHRIQNSVKNMVQLLDDILIINRAEAG 137 Query: 254 CEELFYEQVAVEDLCLAVISMVQTKAKEKQLALNLTIDDGVDFCYVDQRRWKQILINLLS 313 E + ++ L I +Q + Q + VD+R + IL NLLS Sbjct: 138 KLEFNPNWLDLKLLFQQFIEEIQLSVSD-QYYFDFICSAQDTKALVDERLVRSILSNLLS 196 Query: 314 NGVKFTPKGS-VTLAVKATDKALIFSVIDTGIGIDPEDQRDLFQPFKQISHPPSFAEKGT 372 N +K++P G + +A+ + +IF V D GIGI PEDQ+ +F+PF + + + GT Sbjct: 197 NAIKYSPGGGQIKIALSLDSEQIIFEVTDQGIGISPEDQKQIFEPFHRGKNVRNIT--GT 254 Query: 373 GLGLALSRRLAQLHGGDIQLTSTPGVGSCFSAIL 406 GLGL ++++ LH G I L S G+ + L Sbjct: 255 GLGLMVAKKCVDLHSGSILLKSAVDQGTTVTICL 288 >SYNE-PCC-01-001690 slr0473 Length = 748 Score = 85.9 bits (211), Expect = 2e-19 Identities = 56/217 (25%), Positives = 104/217 (47%), Gaps = 11/217 (5%) Query: 195 HEFRTPLTAIIGFARMLRDELYGKLNPKQHQYVQGTLNSAEHLLSLVNDFLDLSKIDARC 254 H+ + PL + + ++L L+ ++ + + +L++D L +K+D + Sbjct: 538 HDLQEPLNQVSNYVQLLEMRYSEALDEDAKDFIDFAVTGVSLMQTLIDDILTYAKVDTQY 597 Query: 255 EELFYEQVAVEDLCLAVISMVQTKAKEKQLALNLTIDDG-VDFCYVDQRRWKQILINLLS 313 +L + V V+ K++ I+ G + DQ + Q+ NL++ Sbjct: 598 AQLTFTDVQ------EVVDKALANLKQRIEESGAEIEVGSMPAVMADQIQLMQVFQNLIA 651 Query: 314 NGVKFTPKGSVTLAV--KATDKALIFSVIDTGIGIDPEDQRDLFQPFKQISHPPSFAEKG 371 NG+KF S + + + A +F+V D GIGIDP+ +F F+++ + KG Sbjct: 652 NGIKFAGDKSPKIKIWGDRQEDAWVFAVQDNGIGIDPQFFERIFVIFQRLHTRDEY--KG 709 Query: 372 TGLGLALSRRLAQLHGGDIQLTSTPGVGSCFSAILPL 408 TG+GLA+ +++ + H G I L S PG GS F +P+ Sbjct: 710 TGMGLAICKKIIEGHQGQIWLESNPGEGSTFYFSIPI 746 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.320 0.137 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,164 Number of Sequences: 78 Number of extensions: 1546 Number of successful extensions: 58 Number of sequences better than 1.0e-05: 15 Number of HSP's better than 0.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 4 Number of HSP's gapped (non-prelim): 15 length of query: 417 length of database: 48,235 effective HSP length: 65 effective length of query: 352 effective length of database: 43,165 effective search space: 15194080 effective search space used: 15194080 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 94 (40.8 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-001517 slr0222 (1178 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-001517 slr0222 2247 0.0 SYNE-PCC-01-000985 sll1475 170 2e-44 SYNE-PCC-01-002873 slr2098 138 9e-35 SYNE-PCC-01-002617 slr1759 127 3e-31 SYNE-PCC-01-001280 sll1871 122 8e-30 SYNE-PCC-01-002778 slr1969 121 1e-29 SYNE-PCC-01-000295 sll0474 112 7e-27 SYNE-PCC-01-000891 sll1353 108 1e-25 SYNE-PCC-01-001509 slr0210 107 3e-25 SYNE-PCC-01-001306 sll1905 99 1e-22 SYNE-PCC-01-002879 slr2104 97 4e-22 SYNE-PCC-01-001132 sll1672 93 4e-21 SYNE-PCC-01-000800 sll1228 92 7e-21 SYNE-PCC-01-002220 slr1212 92 1e-20 SYNE-PCC-01-001294 sll1888 91 3e-20 SYNE-PCC-01-001690 slr0473 87 3e-19 SYNE-PCC-01-000983 sll1473 62 1e-11 SYNE-PCC-01-001133 sll1673 51 2e-08 SYNE-PCC-01-002672 slr1837 47 4e-07 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 43 6e-06 >SYNE-PCC-01-001517 slr0222 Length = 1178 Score = 2247 bits (5822), Expect = 0.0 Identities = 1147/1178 (97%), Positives = 1147/1178 (97%) Query: 1 MPIIPSPKVLLVDDQRENLVALSRALDSLPVEIITANSGQEAIXXXXXXEFALMILAQEM 60 MPIIPSPKVLLVDDQRENLVALSRALDSLPVEIITANSGQEAI EFALMILAQEM Sbjct: 1 MPIIPSPKVLLVDDQRENLVALSRALDSLPVEIITANSGQEAIATAATTEFALMILAQEM 60 Query: 61 SELDGLNTAKILRSFPLAEQTPIIFLARQEIITKAMAEINILGLVDFLAQPPNQNFLQVK 120 SELDGLNTAKILRSFPLAEQTPIIFLARQEIITKAMAEINILGLVDFLAQPPNQNFLQVK Sbjct: 61 SELDGLNTAKILRSFPLAEQTPIIFLARQEIITKAMAEINILGLVDFLAQPPNQNFLQVK 120 Query: 121 AKLYLQLFQQKQTLQYYNNYLESSVKSVHFDVKNNHSEQLSEIILANISDTVFVTDLSGK 180 AKLYLQLFQQKQTLQYYNNYLESSVKSVHFDVKNNHSEQLSEIILANISDTVFVTDLSGK Sbjct: 121 AKLYLQLFQQKQTLQYYNNYLESSVKSVHFDVKNNHSEQLSEIILANISDTVFVTDLSGK 180 Query: 181 FTFICSNIDNIFGYSLAEVNAMGTVETLLGDFRFNEYELKEKGELKNLRHDVQDKQGKIH 240 FTFICSNIDNIFGYSLAEVNAMGTVETLLGDFRFNEYELKEKGELKNLRHDVQDKQGKIH Sbjct: 181 FTFICSNIDNIFGYSLAEVNAMGTVETLLGDFRFNEYELKEKGELKNLRHDVQDKQGKIH 240 Query: 241 YLLINLKKVAINGGIYLYSCRDISEWARKEQAIRNSEANFRDIFASIKDGLLVLDEDNYI 300 YLLINLKKVAINGGIYLYSCRDISEWARKEQAIRNSEANFRDIFASIKDGLLVLDEDNYI Sbjct: 241 YLLINLKKVAINGGIYLYSCRDISEWARKEQAIRNSEANFRDIFASIKDGLLVLDEDNYI 300 Query: 301 CYANAQAVKLLNCTLEELVGTIGSPLEDTEFSLLVDDGTIYTVDVSVTEITWYGQTAKLV 360 CYANAQAVKLLNCTLEELVGTIGSPLEDTEFSLLVDDGTIYTVDVSVTEITWYGQTAKLV Sbjct: 301 CYANAQAVKLLNCTLEELVGTIGSPLEDTEFSLLVDDGTIYTVDVSVTEITWYGQTAKLV 360 Query: 361 SLRDISDRKRMENQLRENQNKYYRLLENLDNGVIVHNANAEIVYANPKAESFLGLTDLEG 420 SLRDISDRKRMENQLRENQNKYYRLLENLDNGVIVHNANAEIVYANPKAESFLGLTDLEG Sbjct: 361 SLRDISDRKRMENQLRENQNKYYRLLENLDNGVIVHNANAEIVYANPKAESFLGLTDLEG 420 Query: 421 RDIDDEYWMFFDKEGEKLEKEEFPVAQVLANQSSLKNFEMGIYRPDTDQLLWAYINAYPE 480 RDIDDEYWMFFDKEGEKLEKEEFPVAQVLANQSSLKNFEMGIYRPDTDQLLWAYINAYPE Sbjct: 421 RDIDDEYWMFFDKEGEKLEKEEFPVAQVLANQSSLKNFEMGIYRPDTDQLLWAYINAYPE 480 Query: 481 FYNEDTIQEIIVTFSDITERKLAEIQLKTINENLEVLIEERTXXXXXXXXXXXXXIIEKE 540 FYNEDTIQEIIVTFSDITERKLAEIQLKTINENLEVLIEERT IIEKE Sbjct: 481 FYNEDTIQEIIVTFSDITERKLAEIQLKTINENLEVLIEERTSELESSNSQLLQEIIEKE 540 Query: 541 QVSITLTTQEAKYRALVRDAGDAIILITIDFIVLEVNYRAVELSGYDQEELIGHSLLDLR 600 QVSITLTTQEAKYRALVRDAGDAIILITIDFIVLEVNYRAVELSGYDQEELIGHSLLDLR Sbjct: 541 QVSITLTTQEAKYRALVRDAGDAIILITIDFIVLEVNYRAVELSGYDQEELIGHSLLDLR 600 Query: 601 LLTPEFYAQQRHFWRTLKREQISQLTDVRLVKKSGELISVDISASVITYENHSIVQCIVH 660 LLTPEFYAQQRHFWRTLKREQISQLTDVRLVKKSGELISVDISASVITYENHSIVQCIVH Sbjct: 601 LLTPEFYAQQRHFWRTLKREQISQLTDVRLVKKSGELISVDISASVITYENHSIVQCIVH 660 Query: 661 DITLQKTIQAQLQRENYFRRQLLEKMVEGLFVCYEVEQFPFLQFTVWNPMMKNITGYSQE 720 DITLQKTIQAQLQRENYFRRQLLEKMVEGLFVCYEVEQFPFLQFTVWNPMMKNITGYSQE Sbjct: 661 DITLQKTIQAQLQRENYFRRQLLEKMVEGLFVCYEVEQFPFLQFTVWNPMMKNITGYSQE 720 Query: 721 EINQCGWYETLYSHGQPQEAVRVRMKAVALGVDMVKEEWQIIRRDGALRTVEISTALITS 780 EINQCGWYETLYSHGQPQEAVRVRMKAVALGVDMVKEEWQIIRRDGALRTVEISTALITS Sbjct: 721 EINQCGWYETLYSHGQPQEAVRVRMKAVALGVDMVKEEWQIIRRDGALRTVEISTALITS 780 Query: 781 NNQTNILAVIQDITDQKRQLQIIQNNEATLRCIVENLPIFFGMRTINFSNWYYINPSFES 840 NNQTNILAVIQDITDQKRQLQIIQNNEATLRCIVENLPIFFGMRTINFSNWYYINPSFES Sbjct: 781 NNQTNILAVIQDITDQKRQLQIIQNNEATLRCIVENLPIFFGMRTINFSNWYYINPSFES 840 Query: 841 LTGYTPDEMYEDPLLWQKIHREEYAENLEQARPNLGEWTIFSMEKKDGTQIWAQTVEFLV 900 LTGYTPDEMYEDPLLWQKIHREEYAENLEQARPNLGEWTIFSMEKKDGTQIWAQTVEFLV Sbjct: 841 LTGYTPDEMYEDPLLWQKIHREEYAENLEQARPNLGEWTIFSMEKKDGTQIWAQTVEFLV 900 Query: 901 DDLSDTARVVVFGQDITDIKRAEIETLRSLVKERELNEAKSQFVDIVSHEFRTPLTSIIG 960 DDLSDTARVVVFGQDITDIKRAEIETLRSLVKERELNEAKSQFVDIVSHEFRTPLTSIIG Sbjct: 901 DDLSDTARVVVFGQDITDIKRAEIETLRSLVKERELNEAKSQFVDIVSHEFRTPLTSIIG 960 Query: 961 FGELLSKYFDRLSTEKKXXXXXXXXXXXXRLKQLIDDVLSISRYDANKIEIELGNINLRN 1020 FGELLSKYFDRLSTEKK RLKQLIDDVLSISRYDANKIEIELGNINLRN Sbjct: 961 FGELLSKYFDRLSTEKKQQYINNIQNSSQRLKQLIDDVLSISRYDANKIEIELGNINLRN 1020 Query: 1021 LANDLIENFSCGLGSEHNFELNYHLKPDEHSLVDVRLLRHILENILSNAIKYSAPGSTIT 1080 LANDLIENFSCGLGSEHNFELNYHLKPDEHSLVDVRLLRHILENILSNAIKYSAPGSTIT Sbjct: 1021 LANDLIENFSCGLGSEHNFELNYHLKPDEHSLVDVRLLRHILENILSNAIKYSAPGSTIT 1080 Query: 1081 LDISKDEEHLLFQVRDEGIGIPLQDQEKLFEAFHRASNVGDIPGTGLGLSIVKRYVEFQG 1140 LDISKDEEHLLFQVRDEGIGIPLQDQEKLFEAFHRASNVGDIPGTGLGLSIVKRYVEFQG Sbjct: 1081 LDISKDEEHLLFQVRDEGIGIPLQDQEKLFEAFHRASNVGDIPGTGLGLSIVKRYVEFQG 1140 Query: 1141 GTIEVISMPGKGTTMVIKLPLNPAPIIQIAQGETDRLS 1178 GTIEVISMPGKGTTMVIKLPLNPAPIIQIAQGETDRLS Sbjct: 1141 GTIEVISMPGKGTTMVIKLPLNPAPIIQIAQGETDRLS 1178 >SYNE-PCC-01-000985 sll1475 Length = 297 Score = 170 bits (431), Expect = 2e-44 Identities = 101/280 (36%), Positives = 162/280 (57%), Gaps = 10/280 (3%) Query: 885 KKDGTQIWAQTVEFLVDDLSDTARV----VVFGQDITDIKRAEIETLRSLVKERELNEAK 940 +KDG++ W VEF + +++ + +D+T+ +R E E +L +E+EL+ K Sbjct: 14 RKDGSEFW---VEFSLVPVANKTGFYTHWIAVQRDVTERRRTE-EVRLALEREKELSRLK 69 Query: 941 SQFVDIVSHEFRTPLTSIIGFGELL-SKYFDRLSTEKKXXXXXXXXXXXXRLKQLIDDVL 999 ++F + SHEFRTPL++ + +LL + L +K+ + QL+DD+L Sbjct: 70 TRFFSMASHEFRTPLSTALAAAQLLENSEVAWLDPDKRSRNLHRIQNSVKNMVQLLDDIL 129 Query: 1000 SISRYDANKIEIELGNINLRNLANDLIENFSCGLGSEHNFELNYHLKPDEHSLVDVRLLR 1059 I+R +A K+E ++L+ L IE + ++ F+ + D +LVD RL+R Sbjct: 130 IINRAEAGKLEFNPNWLDLKLLFQQFIEEIQLSVSDQYYFDFICSAQ-DTKALVDERLVR 188 Query: 1060 HILENILSNAIKYSAPGSTITLDISKDEEHLLFQVRDEGIGIPLQDQEKLFEAFHRASNV 1119 IL N+LSNAIKYS G I + +S D E ++F+V D+GIGI +DQ+++FE FHR NV Sbjct: 189 SILSNLLSNAIKYSPGGGQIKIALSLDSEQIIFEVTDQGIGISPEDQKQIFEPFHRGKNV 248 Query: 1120 GDIPGTGLGLSIVKRYVEFQGGTIEVISMPGKGTTMVIKL 1159 +I GTGLGL + K+ V+ G+I + S +GTT+ I L Sbjct: 249 RNITGTGLGLMVAKKCVDLHSGSILLKSAVDQGTTVTICL 288 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 138 bits (348), Expect = 9e-35 Identities = 159/631 (25%), Positives = 283/631 (44%), Gaps = 61/631 (9%) Query: 564 IILITIDFIVLEVNYRAVELSGYDQEELIGHSLLDLRLLTPEFY---AQQRHFWRTLKRE 620 +I + + F+ L + + ++ +G S L + L T + HF E Sbjct: 162 VIAVMLAFVALLFRFHSAKIFHTTHGPALGSSALVMGLSTSGMHYTAMTATHFICRPWGE 221 Query: 621 QISQLTDVRLVKKSGELISVDISASVITYENHSIVQCIVHDITLQKTIQAQLQRENYFRR 680 Q D++ V I+V IS +++T ++ ++ +I++Q Q L + R Sbjct: 222 FFIQGIDIQEVA-----IAVTISITLLT---GGVMLFVLREISIQNQQQKILVATESWYR 273 Query: 681 QLLEKMVEGLFVCYEVEQFPFLQFTVWNPMMKNITGYSQEE-----INQCGWYETLYSHG 735 Q++E EG+ V + N ++ + GYSQ E I G E L Sbjct: 274 QIIEYAPEGIMVLDAQGNI-----ILANTSIEKLFGYSQTELIGQSIALLGLAELL---- 324 Query: 736 QPQEAVRVRMKAVALG--VDMVKEEWQII--RRDGALRTVEISTALITSNNQT--NILAV 789 Q+++ + + +G + +EE++I+ R DG+ +E+S + S +Q NI A Sbjct: 325 --QQSLHLLQEGEDVGPTCPLDQEEFEILGTRYDGSEFPIEVSLTSLPSLSQREMNIFAS 382 Query: 790 IQDITDQKRQLQIIQNNEATLRCIVENLPIFFGMRTINFSNWYYINPSFESLT----GYT 845 ++DI+ ++ Q I L+ ++++ P+ + + + NP L G + Sbjct: 383 VRDISARQEAQQQILRQREHLQSVLDSAPVGVAITVNGITQ--FANPHIGELVDLKVGDS 440 Query: 846 PDEMYEDPLLWQKIHREEYAENLEQARPNLGEWTIFSMEKKDGTQIWAQTVEFLVDDLSD 905 P ++Y D R++ E L Q + ++ M G +I FL D Sbjct: 441 PQKIYVD-----LGDRQQMLEELTQF--GRSQSRVYKMYNPRG-EIRDILATFLATDYEG 492 Query: 906 TARVVVFGQDITDIKRAEIETLRSLVKERELNEAKSQFVDIVSHEFRTPLTSIIGFGELL 965 ++ + DIT IK AE E R+ E + K+ F+ +SHE RTP+ ++IG L Sbjct: 493 QKGILGWLADITPIKAAEAEMKRAKELAEEASRIKADFLANMSHEIRTPMNAVIGMTHLA 552 Query: 966 SKYFDRLSTEKKXXXXXXXXXXXXRLKQLIDDVLSISRYDANKIEIELGNINLRNLAND- 1024 K T ++ L +I+D+L S+ +A K+ +E + +L + ++ Sbjct: 553 LK---TDLTPRQREYLHKIRFSGQHLLGVINDILDFSKIEAGKLPMESIDFDLDKVLDNV 609 Query: 1025 --LIENFSCGLGSEHNFELNYHLKPDEHSLVDVRLLRHILENILSNAIKYSAPGS---TI 1079 LI + G E F+++ +L H + D L IL N +NA+K++ G + Sbjct: 610 ATLISEKATNKGLELLFDIDRNL--PRHFIGDPLRLGQILINYANNAVKFTEQGDITIVV 667 Query: 1080 TLDISKDEEHLLF-QVRDEGIGIPLQDQEKLFEAFHRA--SNVGDIPGTGLGLSIVKRYV 1136 L +D++ +L+ V+D GIGI + LF +F +A S + GTGLGL+I KR Sbjct: 668 RLQEYRDQDVVLYLAVKDTGIGIKPEHIANLFNSFQQADSSTTRNFGGTGLGLAICKRIA 727 Query: 1137 EFQGGTIEVISMPGKGTTMVIKLPLNPAPII 1167 E GG + V S G+G+T K+ L + +I Sbjct: 728 ELMGGEVGVESEYGQGSTFWAKVCLQKSNVI 758 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 127 bits (318), Expect = 3e-31 Identities = 162/701 (23%), Positives = 290/701 (41%), Gaps = 96/701 (13%) Query: 538 EKEQVSITLTTQEAKYRALVRDAGDAIILITIDFIVLEVNYRAVELSGYDQEELIG--HS 595 +K + + T QE + D + + + ++ VN + VE+SGY +EELIG H Sbjct: 318 QKVEEFLKSTLQELAVQKTALDEAAIVAITDTEGVITYVNDKFVEVSGYSREELIGNTHR 377 Query: 596 LLDLRLLTPEFYAQQRHFWRTLKREQISQLTDVRLVKKSGELISVDISASVITYENHSIV 655 L+ +PEF+ Q FW+T++ ++ + K+G VD + +N + Sbjct: 378 LVSSGYHSPEFFQQ---FWQTIRAGKVWH-GQINNRAKAGNTYWVDSTVVPFLDDNGNPY 433 Query: 656 Q--CIVHDITLQKTIQAQLQRENYFRRQLLEKMVEGLFVCYEVEQFPF-----LQFTVWN 708 Q I +IT K + L+ R + + L+V + ++ F L+F Sbjct: 434 QYLAIRFEITSSKQAEKSLRESEARFRMMADTSPIMLWVADQDKKMTFVNQSWLEFRGAT 493 Query: 709 PMMKNITGYSQE-EINQCGWYETLYSHG---QPQEAVRVRMKAVA--------LGVDMVK 756 ++ GY + + G Y +YS + + + R + V +GV Sbjct: 494 LAEESGNGYLEGIHPDDKGHYLGVYSQAFGDRRRFELEYRYRRVDQQYRWIVNVGVPRYL 553 Query: 757 EEWQIIRRDGA-LRTVEISTALITSNNQTNILAVIQDITDQ-KRQLQI----------IQ 804 E+ + + G+ L + A + N + +++ I+ + +R LQ + Sbjct: 554 EDGKFMGYVGSCLDITDRKQAQDILQKKLNQILLMRKISQEIRRSLQPTLIFQTAARQVG 613 Query: 805 NNEATLRCIVENLPIFFGMRTINFSNWYYINPSFESL-TGYTPDEMYEDPLLWQ------ 857 N A RC++ N ++ + Y+ F SL G E DP + Q Sbjct: 614 NVFAVSRCLIHNYSEATTLQVPVVAE--YLGGQFTSLLAGEIAVEQAYDPTIIQGDRAMA 671 Query: 858 ---------KIHREEYAENLEQARPNLGEWT--------IFSMEKKDGTQIWAQTVEFLV 900 H + + + Q + L T I ++ + D ++W L+ Sbjct: 672 VVDLDQDLNSTHTKAFYQRF-QVKSFLAVRTSYQGKANGIIALHQCDRQRVWTADEIELL 730 Query: 901 DDLSDTARVVVFGQDITDIKRAEIETLRSLVKERE--------LNEAKSQFVDIVSHEFR 952 + +++ + + + + +R L E E N AK +F+ ++SHE R Sbjct: 731 EAIAEQMGIALAQAALLEKERERRRELAQKNLELEKATWAAEAANRAKGEFLAMMSHEIR 790 Query: 953 TPLTSIIGFGELLSKYFDRLSTEKKXXXXXXXXXXXXRLKQLIDDVLSISRYDANKIEIE 1012 TP+ +IG ELL L ++ L +I+D+L S+ +A+K+ +E Sbjct: 791 TPMNGVIGMTELLIMTDLNL---QQLDYVQTIRQSGETLLTIINDILDFSKIEADKLVLE 847 Query: 1013 LGNINLRNLANDLIENFSCGLGSEHNFELNYHLKPDEHSLV--DVRLLRHILENILSNAI 1070 LR L ++E F ++H EL Y + P + + D LR IL N++ NA+ Sbjct: 848 TQAFELRPLIETVLEMFGPIARAKH-LELTYGIDPQTPARILGDQVRLRQILSNLIGNAL 906 Query: 1071 KYSAPGSTIT----------------LDISKDEEHLLFQVRDEGIGIPLQDQEKLFEAFH 1114 K++ G + L++ + F +RD GIGIPL Q++LF++F Sbjct: 907 KFTEKGEVVLTVKGEPFDPAESYHTILNLPHPSHRICFNLRDTGIGIPLDRQDRLFKSFS 966 Query: 1115 R--ASNVGDIPGTGLGLSIVKRYVEFQGGTIEVISMPGKGT 1153 + +S GTGLGL I +R + GG + V S PG G+ Sbjct: 967 QVDSSTTRKYGGTGLGLVISQRLTQMMGGVLTVTSEPGVGS 1007 >SYNE-PCC-01-001280 sll1871 Length = 674 Score = 122 bits (305), Expect = 8e-30 Identities = 89/250 (35%), Positives = 134/250 (53%), Gaps = 15/250 (6%) Query: 925 ETLRSLVKEREL--------NEAKSQFVDIVSHEFRTPLTSIIGFGELLSKYFDRLSTEK 976 E L + VK EL N KS F+ +SHE RTPL +IIG+ E+L + + L +E+ Sbjct: 415 EELENTVKALELASSEAEAANATKSIFLANMSHELRTPLNAIIGYSEMLIEEAEDLDSEE 474 Query: 977 KXXXXXXXXXXXXRLKQLIDDVLSISRYDANKIEIELGNINLRNLANDLIENFSCGLGSE 1036 L LI+D+L IS+ +A K+E+ L NL+ L +++ S L + Sbjct: 475 LVPDLDKILRSGKSLLALINDLLDISKIEAGKMELYLETFNLKELIAGILDTISPLLKNN 534 Query: 1037 HN-FELNYHLKPDEHSLVDVRLLRHILENILSNAIKYSAPG--STITLDISKDE-EHLLF 1092 +N E+ L+ +E D+ LR + N+LSNA K++ G S I + DE + L F Sbjct: 535 NNKLEVEISLESEE-VYGDLIKLRQGILNLLSNASKFTKDGIISFIVEEFKVDEKDWLSF 593 Query: 1093 QVRDEGIGIPLQDQEKLFEAFHRA--SNVGDIPGTGLGLSIVKRYVEFQGGTIEVISMPG 1150 QV+D GIG+ + KLF+ F +A S GTGLGL+I +++ + GG I + S G Sbjct: 594 QVKDTGIGLTEEQMSKLFQPFTQADSSTTRKYGGTGLGLAITRKFCQMMGGDIYLTSEIG 653 Query: 1151 KGTTMVIKLP 1160 G++ IKLP Sbjct: 654 VGSSFTIKLP 663 >SYNE-PCC-01-002778 slr1969 Length = 750 Score = 121 bits (303), Expect = 1e-29 Identities = 80/244 (32%), Positives = 122/244 (50%), Gaps = 7/244 (2%) Query: 929 SLVKERELNEAKSQFVDIVSHEFRTPLTSIIGFGELLSKYFDR---LSTEKKXXXXXXXX 985 +L+ + N KSQF++ +SHE RTPLTSIIG L ++FD L K+ Sbjct: 368 TLMAAQAANLLKSQFINNISHELRTPLTSIIGLSATLLRWFDHPASLPPAKQQYYLLNIQ 427 Query: 986 XXXXRLKQLIDDVLSISRYDANKIEIELGNINLRNLANDLIENF-SCGLGSEHNFELNYH 1044 +L I+ ++ +S+ ++ + + + +L LA +I + + + N EL+Y Sbjct: 428 ENGKKLLDQINSIIQLSQLESGQTALNCQSFSLHTLAQTVIHSLLGVAIKQQINLELDYQ 487 Query: 1045 LKPDEHSL-VDVRLLRHILENILSNAIKYSAPGSTITLDISKDEEHLLFQVRDEGIGIPL 1103 + + D L IL +L+NA+K++ T+ L I K+ +FQV D GIGI Sbjct: 488 INVGQDQFCADQERLDQILTQLLNNALKFTPAEGTVILRIWKESNQAIFQVEDTGIGINE 547 Query: 1104 QDQEKLFEAFHRA--SNVGDIPGTGLGLSIVKRYVEFQGGTIEVISMPGKGTTMVIKLPL 1161 Q LFEAF A S G+GL++ K+ VE GG IEV S PG+GT +P Sbjct: 548 QQLPVLFEAFKVAGDSYTSFYETGGVGLALTKQLVELHGGYIEVESSPGQGTIFTTVIPQ 607 Query: 1162 NPAP 1165 P Sbjct: 608 QNFP 611 >SYNE-PCC-01-000295 sll0474 Length = 806 Score = 112 bits (280), Expect = 7e-27 Identities = 98/349 (28%), Positives = 159/349 (45%), Gaps = 24/349 (6%) Query: 827 NFSNWYYINPSFESLTGYTPDEMYEDPLLWQKIHREEYAENLEQARPNLGEWTIFSMEKK 886 N W E G + + P+ WQ I ++LE P + T +E Sbjct: 311 NLITWLGFEQPLEPADGDFFIHLGDRPMFWQAIE-----QSLED--PTMELSTELRLEAA 363 Query: 887 DGTQIWAQTVEFLVDDLSDTARVVVFGQ--DITDIKRAEIETLRSLVKERELNEAKSQFV 944 +G +I+ + + A V + G DIT+IK+AE + S + + K +F+ Sbjct: 364 NG-EIYHCLLRGQIHQEQGEAFVKIIGTIADITEIKKAEEQLKLSNKILAKATQLKDEFL 422 Query: 945 DIVSHEFRTPLTSIIGFGELLSKYFDRLSTEKKXXXXXXXXXXXXRLKQLIDDVLSISRY 1004 +SHE RTPL SI+G E L K+ L LI+D+L +S+ Sbjct: 423 ANMSHELRTPLNSILGMIETLQNQVYGPLNGKQVQSLEIVENSGRHLLSLINDILDLSKI 482 Query: 1005 DANKIEIELGNINLRNLANDLIENFSCGLGSEHNFELNYHLKPD-EHSLVDVRLLRHILE 1063 +A +++++L ++ L N + F + L+ + P+ LVD R L +L Sbjct: 483 EAGRMDLDLNPTSVSALVNHSL-TFVQQFAIQKQINLSSEIIPNLPDVLVDKRRLCQVLI 541 Query: 1064 NILSNAIKYSAPGSTITL--DISKDE--------EHLLFQVRDEGIGIPLQDQEKLFEAF 1113 N+L+NAIK++ G + + D+ K++ L F V D GIGI +FE F Sbjct: 542 NLLNNAIKFTPEGGKVVVQADLIKEQGKENSQSPPQLSFTVFDTGIGIEADRLNNIFEPF 601 Query: 1114 HRASNVGD--IPGTGLGLSIVKRYVEFQGGTIEVISMPGKGTTMVIKLP 1160 + + + GTGLGLS+VK+ VE GG++ V S +G+ I +P Sbjct: 602 VQIDSALNRRYDGTGLGLSLVKKIVELHGGSVTVTSKLNEGSRFKITIP 650 >SYNE-PCC-01-000891 sll1353 Length = 998 Score = 108 bits (269), Expect = 1e-25 Identities = 83/259 (32%), Positives = 130/259 (50%), Gaps = 17/259 (6%) Query: 915 DITDIKRAEIETLRSLVKEREL-NEAKSQFVDIVSHEFRTPLTSIIGFGELLSKYFDRLS 973 +I + +R EI+ LR + EL N KS+F+ +SHE RTP+ +I+GF +LL + LS Sbjct: 575 EIEERQRIEIK-LREAKESAELANRVKSEFLANISHEIRTPMNAILGFCDLLLQKDLSLS 633 Query: 974 TEKKXXXXXXXXXXXXRLKQLIDDVLSISRYDANKIEIELGNINLRNLANDLIENFSCGL 1033 KK L LIDD+L IS+ +A K+ I L ++LR + ++ + F Sbjct: 634 QTKKYLNAIGSSSKI--LLALIDDILDISKIEAGKLVIHLEPVDLRVIIREIKQIFDYKA 691 Query: 1034 GSEHNFELNYHLKPDEHSLV--DVRLLRHILENILSNAIKYSAPGST--------ITLDI 1083 S+ + L + + + D LR IL N++ NA+K++ G I + Sbjct: 692 ESK-SLLLTIQIDETLNQAIYFDAVRLRQILFNLVGNALKFTEEGQVFIYIGVEGIQVRS 750 Query: 1084 SKDEEHLLFQVRDEGIGIPLQDQEKLFEAF--HRASNVGDIPGTGLGLSIVKRYVEFQGG 1141 L +V D GIGI +DQ K+F+ F + + GTGLGL+I +R GG Sbjct: 751 QGTYISLAIEVTDTGIGIAPEDQAKIFDVFTQSQGQSTRKYGGTGLGLTITRRLTALLGG 810 Query: 1142 TIEVISMPGKGTTMVIKLP 1160 I + S G+G+T ++ P Sbjct: 811 EISLSSRLGEGSTFILHFP 829 >SYNE-PCC-01-001509 slr0210 Length = 417 Score = 107 bits (266), Expect = 3e-25 Identities = 72/218 (33%), Positives = 108/218 (49%), Gaps = 5/218 (2%) Query: 947 VSHEFRTPLTSIIGFGELLSKYFDRLSTEKKXXXXXXXXXXXXRLKQLIDDVLSISRYDA 1006 + HEFRTPLT+IIGF +L K+ L L++D L +S+ DA Sbjct: 193 IHHEFRTPLTAIIGFARMLRDELYGKLNPKQHQYVQGTLNSAEHLLSLVNDFLDLSKIDA 252 Query: 1007 NKIEIELGNINLRNLANDLIENFSCGLGSEHNFELNYHLKPD-EHSLVDVRLLRHILENI 1065 E+ + + +L +I E LN + + VD R + IL N+ Sbjct: 253 RCEELFYEQVAVEDLCLAVISMVQTK-AKEKQLALNLTIDDGVDFCYVDQRRWKQILINL 311 Query: 1066 LSNAIKYSAPGSTITLDISKDEEHLLFQVRDEGIGIPLQDQEKLFEAFHRASNVGDI--P 1123 LSN +K++ GS +TL + ++ L+F V D GIGI +DQ LF+ F + S+ Sbjct: 312 LSNGVKFTPKGS-VTLAVKATDKALIFSVIDTGIGIDPEDQRDLFQPFKQISHPPSFAEK 370 Query: 1124 GTGLGLSIVKRYVEFQGGTIEVISMPGKGTTMVIKLPL 1161 GTGLGL++ +R + GG I++ S PG G+ LPL Sbjct: 371 GTGLGLALSRRLAQLHGGDIQLTSTPGVGSCFSAILPL 408 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 98.6 bits (244), Expect = 1e-22 Identities = 71/216 (32%), Positives = 107/216 (49%), Gaps = 12/216 (5%) Query: 937 NEAKSQFVDIVSHEFRTPLTSIIGFGELLSKYFDRLSTEKKXXXXXXXXXXXXRLKQLID 996 N +KS+F+ +SHE RTP+ +IIG LL D T ++ L LI+ Sbjct: 318 NRSKSEFLATMSHEIRTPMNAIIGMTGLL---LDTDLTTQQKYFAQTIRNSGETLLTLIN 374 Query: 997 DVLSISRYDANKIEIELGNINLRNLANDLIENFSCGLGSEHNFELNYHLKPDEHSLV-DV 1055 D+L S+ +A K+++E+ +L + ++ + + L P +L DV Sbjct: 375 DILDFSKIEAGKLDLEVYPFDLGQCLEEALDVVVPSARQKSLTLIRRFLTPIPPNLQGDV 434 Query: 1056 RLLRHILENILSNAIKYSAPG------STITLDISKDEEHLLFQVRDEGIGIPLQDQEKL 1109 LR IL N+LSNA+K++ G + D +K E + F V+D GIGI Q+ L Sbjct: 435 TRLRQILVNLLSNAVKFTEAGQVKVTVEVVDHDAAKGEYQICFAVQDTGIGIAPNQQQAL 494 Query: 1110 FEAFHR--ASNVGDIPGTGLGLSIVKRYVEFQGGTI 1143 F+AF + +S GTGLGL+I R GGTI Sbjct: 495 FQAFSQGNSSITRRFGGTGLGLAICVRLTALMGGTI 530 Score = 55.5 bits (132), Expect = 1e-09 Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 13/187 (6%) Query: 9 VLLVDDQRENLVALSRALDSLPVEIITANSGQEAIXXXXXXEFALMILAQEMSELDGLNT 68 +L+VDD +EN+ +S L+ SG EA+ + L++L M +DGL Sbjct: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQPDLILLDLMMPGMDGLEV 79 Query: 69 AKILRSFPLAEQTPIIFLA---RQEIITKAMAEINILGLVDFLAQPPNQNFLQVKAKLYL 125 L+ P P+IFL ++ + +A A+ G VD++ +P + L + K +L Sbjct: 80 CDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAK----GAVDYVTKPFSPPELLARVKTHL 135 Query: 126 QLFQQKQTLQYYNNYLESSVKSVHFDVKNNHSEQLSEIILANISDTVFVTDLSGKFTFIC 185 +L Q + L ++ LE + + + S +L I++ N+ V +TD G + Sbjct: 136 ELKQTRDNL--HHTLLEQARTA---EALACTSTRLG-ILVQNMQAGVLMTDAQGTIVVVN 189 Query: 186 SNIDNIF 192 +F Sbjct: 190 PEFARLF 196 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 96.7 bits (239), Expect = 4e-22 Identities = 88/285 (30%), Positives = 136/285 (47%), Gaps = 39/285 (13%) Query: 914 QDITDIKRAEI------ETLRSLVKERE-------------------LNEAKSQFVDIVS 948 QD+T+++ A+I E L ++ER +AKS+F+ +S Sbjct: 407 QDVTELQEAQISLEHLNEKLEQRIQERTQELENSQESLLEAKLVAEGATKAKSEFLANMS 466 Query: 949 HEFRTPLTSIIGFGELLSKYFDRLSTEKKXXXXXXXXXXXXRLKQLIDDVLSISRYDANK 1008 HE RTP+ +IIG EL+ T ++ L +I+++L S+ +A K Sbjct: 467 HEIRTPMNAIIGMSELV---LQTDLTSQQRNYLQKVQYAGELLLGIINNILDFSKMEAGK 523 Query: 1009 IEIELGNINLRNLANDLIENFSCGLGSE-HNFELNYHLKPD-EHSLVDVRL-LRHILENI 1065 +E+E ++ + +L + G+ +E LN+HL P LV RL L IL N+ Sbjct: 524 LELEQKPFSVEEVMGNL--HSILGIQAEAKGLTLNFHLDPRIPPILVGDRLRLSQILINL 581 Query: 1066 LSNAIKYSAPGS-TITLDISKDEEH---LLFQVRDEGIGIPLQDQEKLFEAFHR--ASNV 1119 +NA+K++ G TI + K E L F V D GIG+ Q KLF+ F++ S Sbjct: 582 GNNAVKFTNQGEITIRGQLLKTENEQTKLQFSVTDTGIGLTPDQQSKLFQWFNQGETSTS 641 Query: 1120 GDIPGTGLGLSIVKRYVEFQGGTIEVISMPGKGTTMVIKLPLNPA 1164 GTGLGL+I K E GG I + S+ G+G+T + L A Sbjct: 642 RQYGGTGLGLAISKSLTELMGGDIWLESVVGQGSTFHFTVCLGTA 686 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 93.2 bits (230), Expect = 4e-21 Identities = 78/249 (31%), Positives = 121/249 (48%), Gaps = 27/249 (10%) Query: 930 LVKERELNE----AKSQFVDIVSHEFRTPLTSIIGFGELLSKYFDRLSTEKKXXXXXXXX 985 LV+ +E+ E AKS FV +SHE R+PL +IIGF +L+ + + ++ Sbjct: 351 LVRAKEIAESEAKAKSTFVANMSHELRSPLNAIIGFSQLMLR--TKNLPMEQYENAGIIQ 408 Query: 986 XXXXRLKQLIDDVLSISRYDANKIEIELGNINLRNLANDLIENFSCGLGSEHNFELNYHL 1045 L LI+++L S+ +A K + N +L L +DL + +E EL + Sbjct: 409 RSGEYLLNLINNILDFSKIEAGKTHLNRHNFDLYLLLDDLEDMLHLKAANE-GIELIFIR 467 Query: 1046 KPDEHSLV--DVRLLRHILENILSNAIKYSAPGSTI-----------------TLDISKD 1086 D V D LR IL N+LSNAIK++ G + T K+ Sbjct: 468 DHDLPRYVYGDEIKLRQILLNLLSNAIKFTTEGEVVLTSNFRNAEQQEVINPETSTEPKN 527 Query: 1087 EEHLLFQVRDEGIGIPLQDQEKLFEAFHRASNVGDIP-GTGLGLSIVKRYVEFQGGTIEV 1145 + L F ++D G GI + LFEAF + + + GTGLGL+I +++++ GG I V Sbjct: 528 KYWLDFTIKDTGKGISEVELSHLFEAFSQTESGRNAQEGTGLGLAITRQFIKLMGGDINV 587 Query: 1146 ISMPGKGTT 1154 S+ +GTT Sbjct: 588 SSVVDQGTT 596 Score = 46.2 bits (108), Expect = 6e-07 Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 1/111 (0%) Query: 5 PSPKVLLVDDQRENLVALSRALDSLPVEIITANSGQEAIXXXXXXEFALMILAQEMSELD 64 P K+L+VDD+ N L + L EI A++GQEAI E L+ + M +D Sbjct: 628 PVYKILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMD 687 Query: 65 GLNTAKILRSFPLAEQTPIIFLARQEIITKAMAEINILGLVDFLAQPPNQN 115 G K ++ T ++ L ++ + A + G DFL +P +N Sbjct: 688 GYEATKYIKGQVKGNATAVVALT-ASVLEEEKAIVLSAGCDDFLRKPFREN 737 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 92.4 bits (228), Expect = 7e-21 Identities = 78/257 (30%), Positives = 121/257 (47%), Gaps = 21/257 (8%) Query: 921 RAEIETLRSLVKERE--LNEAKSQFVDIVSHEFRTPLTSIIGFGELLSKYFDRLSTEKKX 978 R + ET + KE N AK++F+ +SHE RTPL +IIGF +LL + S Sbjct: 142 RHQAETTLTQAKEAADAANRAKTEFLASISHELRTPLNAIIGFSQLLHR---DPSLAPHR 198 Query: 979 XXXXXXXXXXXRLKQLIDDVLSISRYDANKIEIELGNINLRNLANDLIENFSCGLGSEHN 1038 L +LI+D+L +S+ +A + + I+ L ++L F E Sbjct: 199 PTLDIINRSGEHLLELINDILEMSKIEAGRTTLNEKIIDCHRLLDNLQALFQL-RAQEKQ 257 Query: 1039 FELNYHLKPD--EHSLVDVRLLRHILENILSNAIKYSAPGSTITLDI------SKDEEH- 1089 L P+ E D LR +L N+L+NAIK++A G +TL + DE Sbjct: 258 LLLKVERSPEVPEWIKTDGGKLRQVLINLLANAIKFTAQGG-VTLKVKCLTAPQTDEGQG 316 Query: 1090 ----LLFQVRDEGIGIPLQDQEKLFEAFHRA-SNVGDIPGTGLGLSIVKRYVEFQGGTIE 1144 L F V D G GI + ++LF F + + + G GLGL I +++V+ GG I+ Sbjct: 317 ASIWLHFLVSDTGPGIAAHEMDELFVPFAQTETGLKSCQGNGLGLPISQKFVQLMGGQIQ 376 Query: 1145 VISMPGKGTTMVIKLPL 1161 V S +G+ +P+ Sbjct: 377 VRSKVDQGSAFFFAIPV 393 Score = 47.8 bits (112), Expect = 2e-07 Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 1/104 (0%) Query: 8 KVLLVDDQRENLVALSRALDSLPVEIITANSGQEAIXXXXXXEFALMILAQEMSELDGLN 67 KVL+VDD+ E+ + L + L SL + A +G+ AI ++++ +M LDG + Sbjct: 419 KVLVVDDRPESRLLLRQLLTSLGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRS 478 Query: 68 TAKILRSFPLAEQTPIIFLARQEIITKAMAEINILGLVDFLAQP 111 T + +++ P + T II L AEI G DFL++P Sbjct: 479 TTQKIKASPQGQHTIIIALT-ASAFEGERAEILSAGCDDFLSKP 521 >SYNE-PCC-01-002220 slr1212 Length = 844 Score = 91.7 bits (226), Expect = 1e-20 Identities = 151/689 (21%), Positives = 270/689 (39%), Gaps = 112/689 (16%) Query: 496 DITERKLAEIQLKTINENLEVLIEERTXXXXXXXXXXXXXIIEKEQVSITLTT---QEAK 552 +I ER+ AEI L+ +N NLE +E+RT I +K + L Q A+ Sbjct: 141 EIKERQTAEIALQELNNNLEKRVEDRTTQLAKINQQLEQEIEDKTRAKEDLEKNKDQLAQ 200 Query: 553 YRALVRDAGDAIILITIDFIVLEVNYRAVELSGYDQEELIGHSLLDLRLLTPEFYAQQRH 612 A+V + DAII T+D + N A L GY EE+IG + +L+ E ++ Sbjct: 201 LAAIVESSQDAIISKTLDGNITSWNESAERLFGYTAEEMIGSHI--TKLIPEELILEEDL 258 Query: 613 FWRTLKREQISQLTDVRLVKKSGELISVDISASVITYENHSIVQC--IVHDITLQKTIQA 670 +++ Q + + +K G I V ++ S I E+ ++V IV DIT + ++ Sbjct: 259 IAECIRQGQRINTYETQRQRKDGTKIDVALTISPIRDEHKNVVGASKIVRDITARLDVEN 318 Query: 671 QLQRENYFRRQLLEKMVEGLFVCYEVEQFPFLQFTVWNPMMKN-----ITGYSQEEINQC 725 L+ YF +EK+ Y + L W + N I GY+ EE Sbjct: 319 ALRESQYF----IEKLAN-----YSPQILYILDPIAWKNIYVNYQSFEILGYTPEEFKN- 368 Query: 726 GWYETLYSHGQPQEAVRV----RMKAVALGVDMVKEEWQIIRRDGA---LRTVEISTALI 778 G E L + P + + + ++ E+++ ++G+ LR+ E+ A Sbjct: 369 GGTELLLNIVHPDDIPTLYENKNFWQKSQEGQVLTTEYRMRHKNGSWRWLRSREVVFARD 428 Query: 779 TSNNQTNILAVIQDITDQKRQLQIIQ---NNEATLRCIVENLPIFFGMRTINFSNWYYIN 835 T +L QDI+D K Q Q + E+ LR I + + + TI + I Sbjct: 429 DYGQVTKVLGTAQDISDSKEQEQRLYEQGRRESLLREITQRIRQSLDLPTIFNTVVQEIR 488 Query: 836 PSFES----LTGYTPDEMYE-------------DPLLWQKIHR----EEYAENLEQARPN 874 E+ + ++PD + P++ I YA+ +Q R Sbjct: 489 QFLEADRVVIFQFSPDSDFSVGNIVAESVLAPFKPIINSAIEETCFSNNYAQRYQQGRIQ 548 Query: 875 LGE----------------------------------WTIFSMEKKDGTQIWAQTVEFLV 900 + E W + + + D +++W QT L+ Sbjct: 549 VIEDIHQSHLRQCHIDFLARLQVRANLVLPLINDAILWGLLCIHQCDSSRVWEQTEIDLL 608 Query: 901 DDLSDTARVVVFGQDITDIKRAEIETLRSL-VKERELNEAKSQFVDIVSHEFRTPLTSII 959 +++ + + + + + E+ + L V+ E K + + H + L + Sbjct: 609 KQITNQFEIAIQQATLYEQAQQELASKNQLFVQLTNELEQKKVLLKEIHHRVKNNLQIM- 667 Query: 960 GFGELLSKYFDRLSTEKKXXXXXXXXXXXXRLKQLIDDVLSISRYDANKIEIELGNIN-- 1017 LL F + S + LI + L S +L NI+ Sbjct: 668 --SSLLYLQFSKAS--PAIQQLSEEYQNRIQSMALIHEQLYRSE--------DLANIDFS 715 Query: 1018 --LRNLANDLIENFSCGLGSEHNFELNYHLK-PDEHSLVDVRLLRHILENILSNAIKYSA 1074 L+NL +++ +++ C S L +K P E S+ L I++ ++SNA+K++ Sbjct: 716 QYLKNLTHNICQSYGCNTDSIKIKLLVEQVKVPLEQSIP----LGLIIQELVSNALKHAF 771 Query: 1075 PGS--TITLDISKDEEHLLFQVRDEGIGI 1101 P + I++ + H QV D G+GI Sbjct: 772 PTTEGEISIKFTSMNSHYSLQVWDNGVGI 800 >SYNE-PCC-01-001294 sll1888 Length = 432 Score = 90.5 bits (223), Expect = 3e-20 Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 35/295 (11%) Query: 892 WAQTVEFLVDDLSDTARVVVFGQDITDIKRAEI--ETLRSLVKERELNEAKSQFVDIVSH 949 W E L+ +L++ Q T I A + E ++ E + KS+F+ +H Sbjct: 152 WHPETEALLQELAE--------QTGTAIAHATLYQELTQATKAAEEASRLKSEFLASTTH 203 Query: 950 EFRTPLTSIIGFGELLSKYFDRLSTE-KKXXXXXXXXXXXXRLKQLIDDVLSISRYDANK 1008 E RTPL IIGF L+ D +E +K L LI+D+L +++ +A + Sbjct: 204 ELRTPLNGIIGFLRLILD--DMADSEAEKHEFVEEAYQSALLLLNLINDILDLAKIEAGR 261 Query: 1009 IEIELGNINLRNLANDLIENFSCGLGSEHNFELNYHL-KPDEHSLV---DVRLLRHILEN 1064 + IEL ++ + ENF+ L N L+++L P++ L+ + R L ++ N Sbjct: 262 VGIELEVVDFSEVL-QATENFA--LPQAQNKGLSFNLTAPNQGPLLVYGNQRWLLQVMLN 318 Query: 1065 ILSNAIKYSAPGSTITLDISKDEEHLLFQ-----------VRDEGIGIPLQDQEKLFEAF 1113 I+ NAIK++ G IT+ + +L++ V D GIG+ L+ Q KLF+ F Sbjct: 319 IVGNAIKFTHEGG-ITVAVEVMPRTVLWEGVQKPGLLKVSVGDTGIGVSLEQQSKLFKKF 377 Query: 1114 HR--ASNVGDIPGTGLGLSIVKRYVEFQGGTIEVISM-PGKGTTMVIKLPLNPAP 1165 + S+ GTGLGL I ++ VE GG + SM G G+T+ + L P Sbjct: 378 VQIDGSHSKAYGGTGLGLVISQKLVETMGGKVAFFSMGEGLGSTVTFTVLLEELP 432 >SYNE-PCC-01-001690 slr0473 Length = 748 Score = 87.0 bits (214), Expect = 3e-19 Identities = 62/248 (25%), Positives = 115/248 (46%), Gaps = 7/248 (2%) Query: 916 ITDIKRAEIETLRSLVKERELNEAK-SQFVDIVSHEFRTPLTSIIGFGELLSKYFDRLST 974 I ++ + E L L + E + A +F I SH+ + PL + + +LL + Sbjct: 504 IVNLILRQAEELAQLARNLERSNADLKKFAYIASHDLQEPLNQVSNYVQLLEMRYSEALD 563 Query: 975 EKKXXXXXXXXXXXXRLKQLIDDVLSISRYDANKIEIELGNINLRNLANDLIENFSCGLG 1034 E ++ LIDD+L+ ++ D ++ ++ + + + + N + Sbjct: 564 EDAKDFIDFAVTGVSLMQTLIDDILTYAKVDTQYAQLTFTDV--QEVVDKALANLKQRI- 620 Query: 1035 SEHNFELNYHLKPDEHSLVDVRLLRHILENILSNAIKYSAPGST-ITLDISKDEEHLLFQ 1093 E E+ P + D L + +N+++N IK++ S I + + E+ +F Sbjct: 621 EESGAEIEVGSMPAV--MADQIQLMQVFQNLIANGIKFAGDKSPKIKIWGDRQEDAWVFA 678 Query: 1094 VRDEGIGIPLQDQEKLFEAFHRASNVGDIPGTGLGLSIVKRYVEFQGGTIEVISMPGKGT 1153 V+D GIGI Q E++F F R + GTG+GL+I K+ +E G I + S PG+G+ Sbjct: 679 VQDNGIGIDPQFFERIFVIFQRLHTRDEYKGTGMGLAICKKIIEGHQGQIWLESNPGEGS 738 Query: 1154 TMVIKLPL 1161 T +P+ Sbjct: 739 TFYFSIPI 746 >SYNE-PCC-01-000983 sll1473 Length = 481 Score = 62.0 bits (149), Expect = 1e-11 Identities = 63/243 (25%), Positives = 117/243 (48%), Gaps = 34/243 (13%) Query: 656 QCIVHDITLQKTIQAQLQRENYFRRQLLEKMVEGLFVCYEVEQFPFLQFTVWNPMMKNIT 715 Q + +I+ ++ +A L+ N+ + L+ G+F +Q +WNP + I Sbjct: 243 QSLRMEISERQKTEAALRHTNHTLQSLIAASPRGIFTLNLADQIQ-----IWNPTAERIF 297 Query: 716 GYSQEEINQCGWYETLYSHGQPQEAVRVRMKAVALGVDMVKEEWQIIRRDGALRTVEIST 775 G+++ EI E L S+ ++ + + K ++ G+ E + ++DG+ + +S Sbjct: 298 GWTETEI--IAHPELLTSNILLEDYQQFKQKVLS-GMVSPSLELKCQKKDGSWIEIVLSA 354 Query: 776 A--LITSNNQTNILAVIQDITDQKRQLQ--------IIQNNEATLRCIVENLPIFF-GMR 824 A L + N ++AV+ DIT+QKRQ + ++ N+A + I E PI G R Sbjct: 355 APLLDSEENIAGLVAVVADITEQKRQAEQIRLLQSVVVNTNDAVV--ITEAEPIDDPGPR 412 Query: 825 TINFSNWYYINPSFESLTGYTPDEMY-EDPLLWQ--KIHREEYAENLEQARPNLGEWTIF 881 + Y+N +F +TGYT +EM + P + Q K R E L++ R + +W Sbjct: 413 IL------YVNEAFTKITGYTAEEMLGKTPRVLQGPKTSRTE----LDRVRQAISQWQSV 462 Query: 882 SME 884 ++E Sbjct: 463 TVE 465 Score = 49.7 bits (117), Expect = 5e-08 Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 20/225 (8%) Query: 506 QLKTINENLEVLIEERTXXXXXXXXXXXXXIIEKEQVSITLTTQEAKYRALVRDAGDAII 565 QL+ +N++LE +E+RT I E+++ L ++L+ + I Sbjct: 219 QLQQLNKDLENRVEKRTQQLAATNQSLRMEISERQKTEAALRHTNHTLQSLIAASPRGIF 278 Query: 566 LITIDFIVLEVNYRAVELSGYDQEELIGH-SLLDLRLLTPEFYAQQRHFWRTLKREQISQ 624 + + + N A + G+ + E+I H LL +L ++ + F + + +S Sbjct: 279 TLNLADQIQIWNPTAERIFGWTETEIIAHPELLTSNILLEDY----QQFKQKVLSGMVSP 334 Query: 625 LTDVRLVKKSGELISVDISASVI--TYENHSIVQCIVHDITLQKTIQAQLQRENYFRRQL 682 +++ KK G I + +SA+ + + EN + + +V DIT QK Q+ +L Sbjct: 335 SLELKCQKKDGSWIEIVLSAAPLLDSEENIAGLVAVVADITEQKRQAEQI--------RL 386 Query: 683 LEKMV---EGLFVCYEVEQF--PFLQFTVWNPMMKNITGYSQEEI 722 L+ +V V E E P + N ITGY+ EE+ Sbjct: 387 LQSVVVNTNDAVVITEAEPIDDPGPRILYVNEAFTKITGYTAEEM 431 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 51.2 bits (121), Expect = 2e-08 Identities = 65/266 (24%), Positives = 108/266 (40%), Gaps = 69/266 (25%) Query: 261 RDISEWARKEQAIRNSEANFRDIFASIKDGLLVL---------DEDNYICYA-NAQAVKL 310 R++ + E+ + S A + S DG+ + D +++ C N K Sbjct: 137 REVRKRREAEEVLYQSRALLSSVLNSALDGIAAMQAVRNPQTGDIEDFRCLVINPILSKA 196 Query: 311 LNCTLEELVGTIG--------SPLEDTEFSLLVDDGTIYTVDV--SVTEITWYGQTA-KL 359 N + E+L+G + P +F LV+ GT T D+ + WY A KL Sbjct: 197 FNRSREDLIGRVLLKRFLQRLDPQLFDQFVNLVETGTFLTQDIYFPIANSDWYHFVAVKL 256 Query: 360 -----VSLRDISDRKRMENQLRENQNKYYRLLENLDNGVIVHNANAEIVYANPKAESFLG 414 V++RDI+DRKRME +L + N+ +LL N+D G Sbjct: 257 GDGFAVTVRDITDRKRMELEL-QAANQQLQLLANID-----------------------G 292 Query: 415 LTDLEGRDIDDEYWMFFDKEGEKLEKEEFPVAQVLANQSSLKNFEMGIYRPDTDQLLWAY 474 LT + R DEY +E ++ +E+ P++ +L + K AY Sbjct: 293 LTHIANRRRFDEY---LAQEWQRHCREQKPLSLILVDIDYFK----------------AY 333 Query: 475 INAYPEFYNEDTIQEIIVTFSDITER 500 + Y +D +Q++ T DI +R Sbjct: 334 NDLYGHQKGDDCLQKVANTLVDIAKR 359 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 46.6 bits (109), Expect = 4e-07 Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 10/151 (6%) Query: 9 VLLVDDQRENLVALSRALDSLPVEIITANSGQEAIXXXXXXEFALMILAQEMSELDGLNT 68 +LLVDD+ LS+AL I A+ G+ + ++ L+IL + ++ GL Sbjct: 4 ILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGLEI 63 Query: 69 AKILRSFPLAEQTPIIFLARQEIITKAMAEINILGLVDFLAQPPNQNFLQVKAKLYLQLF 128 + +R L TP++FL ++ + +A ++ G D+L +P L + + L+ Sbjct: 64 CRQIRI--LGHSTPVLFLTAKDTLDDRVAGLD-AGGDDYLIKPFELRELLARVRALLRRQ 120 Query: 129 QQKQTL-----QYYNNYLESSVKSVHFDVKN 154 +T+ NN L SV +V DV N Sbjct: 121 SHGETITETLGAVKNNLL--SVNNVSLDVAN 149 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 42.7 bits (99), Expect = 6e-06 Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 7/120 (5%) Query: 8 KVLLVDDQRENLVALSRALDSLPVEIITANSGQEAIXXXXXXEFALMILAQEMSELDGLN 67 K+LLVDD E LS L+ ++ TAN+G EA+ + L++L M +L+G+ Sbjct: 3 KLLLVDDDIELTELLSTLLELEGFDVETANNGLEAL-QKLNESYKLVLLDVMMPKLNGIE 61 Query: 68 TAKILRSFPLAEQTPIIFL-ARQEIITKAMAEINILGLVDFLAQPPNQNFLQVKAKLYLQ 126 T K +R P++ L AR E I + + LG D L +P N L + K L+ Sbjct: 62 TLKEIRK---VSNVPVMMLTARGEDIDRVLG--LELGADDCLPKPFNDRELIARIKAILR 116 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.319 0.137 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 112,081 Number of Sequences: 78 Number of extensions: 5429 Number of successful extensions: 149 Number of sequences better than 1.0e-05: 20 Number of HSP's better than 0.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 13 Number of HSP's that attempted gapping in prelim test: 46 Number of HSP's gapped (non-prelim): 55 length of query: 1178 length of database: 48,235 effective HSP length: 73 effective length of query: 1105 effective length of database: 42,541 effective search space: 47007805 effective search space used: 47007805 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 98 (42.4 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-001575 slr0312 (209 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-001575 slr0312 400 e-114 HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator pr... 137 3e-35 SYNE-PCC-01-000608 sll0921 130 2e-33 SYNE-PCC-01-001075 sll1592 128 2e-32 SYNE-PCC-01-001160 sll1708 119 6e-30 SYNE-PCC-01-002731 slr1909 82 2e-18 SYNE-PCC-01-002635 slr1783 72 2e-15 SYNE-PCC-01-002489 slr1588 67 3e-14 SYNE-PCC-01-001039 sll1544 67 6e-14 SYNE-PCC-01-000511 sll0782 58 2e-11 SYNE-PCC-01-001132 sll1672 57 3e-11 SYNE-PCC-01-002033 slr0947 55 1e-10 SYNE-PCC-01-000800 sll1228 55 1e-10 SYNE-PCC-01-002873 slr2098 55 2e-10 SYNE-PCC-01-002618 slr1760 55 2e-10 SYNE-PCC-01-000414 sll0649 53 9e-10 SYNE-PCC-01-002221 slr1213 52 2e-09 SYNE-PCC-01-001461 slr0115 52 2e-09 SYNE-PCC-01-002672 slr1837 51 2e-09 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 49 1e-08 SYNE-PCC-01-002951 ssl0564 47 4e-08 SYNE-PCC-01-002617 slr1759 46 1e-07 SYNE-PCC-01-001306 sll1905 45 1e-07 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 45 1e-07 SYNE-PCC-01-002086 slr1042 45 2e-07 SYNE-PCC-01-002879 slr2104 43 7e-07 SYNE-PCC-01-002788 slr1982 43 9e-07 SYNE-PCC-01-002486 slr1584 42 2e-06 SYNE-PCC-01-000242 sll0396 40 4e-06 SYNE-PCC-01-000518 sll0789 40 8e-06 SYNE-PCC-01-000877 sll1330 39 1e-05 >SYNE-PCC-01-001575 slr0312 Length = 209 Score = 400 bits (1029), Expect = e-114 Identities = 209/209 (100%), Positives = 209/209 (100%) Query: 1 MSQATTIRVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDL 60 MSQATTIRVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDL Sbjct: 1 MSQATTIRVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDL 60 Query: 61 RMPEVEGVAAISAICAIVKFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAI 120 RMPEVEGVAAISAICAIVKFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAI Sbjct: 61 RMPEVEGVAAISAICAIVKFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAI 120 Query: 121 RTVHRGQKYIPPDVGAKLVQRLSNPELSERELEVLGSLAQGMSNADIATALSIGEGTVKS 180 RTVHRGQKYIPPDVGAKLVQRLSNPELSERELEVLGSLAQGMSNADIATALSIGEGTVKS Sbjct: 121 RTVHRGQKYIPPDVGAKLVQRLSNPELSERELEVLGSLAQGMSNADIATALSIGEGTVKS 180 Query: 181 HVNRILNKLDVGDRTQAVIVAVKRGIVSL 209 HVNRILNKLDVGDRTQAVIVAVKRGIVSL Sbjct: 181 HVNRILNKLDVGDRTQAVIVAVKRGIVSL 209 >HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator protein (narP) Length = 208 Score = 137 bits (345), Expect = 3e-35 Identities = 73/198 (36%), Positives = 118/198 (59%), Gaps = 4/198 (2%) Query: 7 IRVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPEVE 66 ++VL+ DDH + R+G+ ++ D + +V+A +G + I++ + PDV ++DL M + Sbjct: 5 LKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLS 64 Query: 67 GVAAISAICAIVKFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHRG 126 G+ + + A ARI++LT D+ DIY + AGA GYLLK+TEPD LL I+ + +G Sbjct: 65 GLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRIAQG 124 Query: 127 QKYIPPDVGAKLVQRL--SNP--ELSERELEVLGSLAQGMSNADIATALSIGEGTVKSHV 182 + + + L++R NP L++RE+ VL +A G+SN IA L I E TVK H+ Sbjct: 125 EVILSDSIKNLLLERTHEDNPLDSLTDREMGVLRQIATGLSNKQIAAQLFISEETVKVHI 184 Query: 183 NRILNKLDVGDRTQAVIV 200 +L KL+V R A ++ Sbjct: 185 RNLLRKLNVHSRVAATVL 202 >SYNE-PCC-01-000608 sll0921 Length = 222 Score = 130 bits (328), Expect = 2e-33 Identities = 71/219 (32%), Positives = 117/219 (53%), Gaps = 17/219 (7%) Query: 7 IRVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPEVE 66 IR+ + +D + RQGL + +P + + +A NG + + ++ +PDV ++D+ +P++ Sbjct: 4 IRIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMN 63 Query: 67 GVAAISAICA--IVKFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVH 124 G+ + + R+++LT D +E + AGA Y +K++ + L+ AI+ H Sbjct: 64 GIDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQATH 123 Query: 125 RGQKYIPPDVGAKLVQRLSNPE---------------LSERELEVLGSLAQGMSNADIAT 169 G +I P + ++ E L+ERELEVL + G SNADIA Sbjct: 124 GGFAWIDPAIARIVLAHAPGAEPSEPSSPSRTSLSYGLTERELEVLQLIVDGCSNADIAE 183 Query: 170 ALSIGEGTVKSHVNRILNKLDVGDRTQAVIVAVKRGIVS 208 L I GTVK+HV ILNKL DRTQA + A++ G+V+ Sbjct: 184 KLYITVGTVKTHVRNILNKLCANDRTQAAVRAIRSGLVN 222 >SYNE-PCC-01-001075 sll1592 Length = 226 Score = 128 bits (321), Expect = 2e-32 Identities = 79/221 (35%), Positives = 127/221 (57%), Gaps = 16/221 (7%) Query: 5 TTIRVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPE 64 T+IR+L+ +D +FR GL T ++++P + V +AE+GE AIA + DV ++D+ +P Sbjct: 6 TSIRILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPG 65 Query: 65 VEGVAAISAICAIVKFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVH 124 + G+ A I I +++LT++ I R ++A A+GY +K + L+ AIR+V Sbjct: 66 IGGIEACHQIKKIHPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLAIRSVA 125 Query: 125 RG------------QKYIPPDVGAKLVQRLSNPE----LSERELEVLGSLAQGMSNADIA 168 G Q V L++ + L++RELE+L +A+G SN +IA Sbjct: 126 AGAFWWDAIASQEIQTAFQHSSSTGAVLPLADADGENPLTKRELEILSLVAKGKSNQEIA 185 Query: 169 TALSIGEGTVKSHVNRILNKLDVGDRTQAVIVAVKRGIVSL 209 L I GTV+ HV+ IL KL+V DRTQA ++A++R +VSL Sbjct: 186 DELYIAPGTVRVHVHTILRKLEVRDRTQAALLAIERRLVSL 226 >SYNE-PCC-01-001160 sll1708 Length = 226 Score = 119 bits (299), Expect = 6e-30 Identities = 65/210 (30%), Positives = 110/210 (52%), Gaps = 9/210 (4%) Query: 7 IRVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPEVE 66 +++LI +D + + GL + ++I + +NG A+ PD+ +MD+ +P ++ Sbjct: 17 MKILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPGLD 76 Query: 67 GVAAISAICAIVKFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHRG 126 G+ A I I+VLT++ +I L +GA Y +K + L+ AI G Sbjct: 77 GIEATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIAAAQDG 136 Query: 127 QKYIPPDVGAKLVQRLSNP---------ELSERELEVLGSLAQGMSNADIATALSIGEGT 177 Y+ P + +V+ L P LSERE++VL + +G SN +IA L + T Sbjct: 137 ATYLDPQIARVVVENLKPPVPEGQADVSSLSEREIDVLKLIVEGKSNQEIAQTLYLSTNT 196 Query: 178 VKSHVNRILNKLDVGDRTQAVIVAVKRGIV 207 +K+HV I+NKL V DR QA ++A++ G+V Sbjct: 197 IKTHVRGIMNKLSVDDRVQAAVIALRSGLV 226 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 81.6 bits (200), Expect = 2e-18 Identities = 53/180 (29%), Positives = 96/180 (53%), Gaps = 9/180 (5%) Query: 35 IAQAENGEQAIALFEEHQPDVTLMDLRMPEVEGVAAISAICAI--VKFARIIVLTTYDSD 92 + A NG +A+ L PD+ + D+ MPE++G A I + + + ++ L+ Sbjct: 34 VTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIPVMFLSAKGQS 93 Query: 93 EDIYRGLQAGAKGYLLKETEPDELLNAIRTVHRGQKYI------PPDVGAKLVQRLSNPE 146 + +GL GA Y+ K EP+EL +++ R + P + A+ VQ + E Sbjct: 94 HNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQADRLLQHNNHPLEDNAR-VQVARDVE 152 Query: 147 LSERELEVLGSLAQGMSNADIATALSIGEGTVKSHVNRILNKLDVGDRTQAVIVAVKRGI 206 L+ E +V+ +AQG++N +IA L + + TV+SHV+ +LNK + +RT+ A+++ I Sbjct: 153 LTPTETKVIQLVAQGLANREIADHLKVSQRTVESHVSNMLNKTGLHNRTELARWAIQKSI 212 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 71.6 bits (174), Expect = 2e-15 Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 29/232 (12%) Query: 2 SQATTIRVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLR 61 + A I +L+ DD R+ + + D +V A N +A + H P + + D+ Sbjct: 51 AMAEPISLLLVDDEPGVRESVQAFLEDSGDFKVDLAA-NATEAWDYLQHHLPALVISDIM 109 Query: 62 MPEVEGVAAISAICAIVKFAR--IIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNA 119 MP+V+G + + +F ++ LT D +G Q G +L K +PDEL Sbjct: 110 MPQVDGYQFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAI 169 Query: 120 IRTVHRGQKYIPPDVGAK-------------LVQRLSNP------------ELSERELEV 154 +R + Q+ D G++ L +++ P + + RE V Sbjct: 170 VRNLLARQQ-ASSDAGSESAKLQEIYQEIRALKEQIGQPSGIHTTPSPIKLDFTPREQSV 228 Query: 155 LGSLAQGMSNADIATALSIGEGTVKSHVNRILNKLDVGDRTQAVIVAVKRGI 206 L ++QG+ N +IA L V+ +V+R+ K RT+ V A++ G+ Sbjct: 229 LDLVSQGLMNKEIAAQLKTSVRNVEKYVSRLFTKTGTNSRTELVRFALQHGL 280 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 67.4 bits (163), Expect = 3e-14 Identities = 48/173 (27%), Positives = 87/173 (50%), Gaps = 16/173 (9%) Query: 9 VLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFE--EHQPDVTLMDLRMPEVE 66 +L+ +D AI R+ + ++ + I +AENG A+ L E PD+ + D+ MPE++ Sbjct: 4 ILVVEDEAIIRELIGETLSLEN--YKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMD 61 Query: 67 GVAAISAICAIVKFARI--IVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVH 124 G I+A+ K A I I LT + +D +G+ +GA YL+K + ++LLNA+ + Sbjct: 62 GHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSRL 121 Query: 125 RGQ----KYIPPDVGAKLVQR------LSNPELSERELEVLGSLAQGMSNADI 167 + Q + + + L +R + P L+ E E+ L G++ + Sbjct: 122 QKQAKLSAFYQGSISSSLTERPRRSGTIGTPTLTPDEAEIWRDLEVGLNTGQV 174 >SYNE-PCC-01-001039 sll1544 Length = 228 Score = 66.6 bits (161), Expect = 6e-14 Identities = 48/195 (24%), Positives = 98/195 (50%), Gaps = 3/195 (1%) Query: 17 IFRQGLATIINRDPDMQVIAQAENGEQAIALFEEH-QPDVTLMDLRMPEVEGVAAISAIC 75 +F +A I ++ P+ + + +A+ FE+ +P V ++ R+ + G+ + + Sbjct: 34 LFAVSVARISSQRPNKKKVKIFTLQSEALTYFEQQPEPLVVVICQRLEDGSGLDLLKQLK 93 Query: 76 AIVKFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLN-AIRTVHRGQKYIPPDV 134 A + + ++L D + Q GA L+ + + +N A+ + +G+ YI + Sbjct: 94 AHARSPQCLLLLLNDHAAIVEEAQQYGADAIFLESSLGNGEINLAVECLLQGRTYIDSRL 153 Query: 135 GAKLVQRLSNP-ELSERELEVLGSLAQGMSNADIATALSIGEGTVKSHVNRILNKLDVGD 193 A R S EL++RE+ +L +A+G +N++I L + TV+ +V I+ KL+ D Sbjct: 154 EAIADYRKSQKDELTQREVAILRLVAEGKTNSEIGQELHLASSTVREYVQTIMRKLNARD 213 Query: 194 RTQAVIVAVKRGIVS 208 RT A I ++ G ++ Sbjct: 214 RTSAAIAGLREGYLT 228 >SYNE-PCC-01-000511 sll0782 Length = 369 Score = 58.2 bits (139), Expect = 2e-11 Identities = 31/67 (46%), Positives = 43/67 (64%) Query: 141 RLSNPELSERELEVLGSLAQGMSNADIATALSIGEGTVKSHVNRILNKLDVGDRTQAVIV 200 +L+ LSERE E++ LAQG+ + DIA L I E TVK HVN L+KL+ +R QA+ Sbjct: 303 KLNKHLLSEREKEIVSLLAQGLRDRDIAEELHISESTVKFHVNGTLHKLNAKNRYQAIYQ 362 Query: 201 AVKRGIV 207 A +G + Sbjct: 363 ATVQGFI 369 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 57.4 bits (137), Expect = 3e-11 Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 5/125 (4%) Query: 8 RVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPEVEG 67 ++L+ DD ++ RQ L ++ P I +A NG++AIAL+E +P + MD+RMP ++G Sbjct: 631 KILVVDDKSVNRQLLIKLLA--PFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDG 688 Query: 68 VAAISAICAIVK--FARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHR 125 A I VK ++ LT +E+ L AG +L K + + +++ T H Sbjct: 689 YEATKYIKGQVKGNATAVVALTASVLEEEKAIVLSAGCDDFLRKPFRENTIFDSL-TKHL 747 Query: 126 GQKYI 130 G Y+ Sbjct: 748 GVTYV 752 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 55.5 bits (132), Expect = 1e-10 Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 3/115 (2%) Query: 11 IADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPEVEGVAA 70 + DD A R+ L T ++ + A +GE+AIA F E PD+ ++D+ MP+++G Sbjct: 1 MVDDEASIRRILETRLSMIG--YEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGV 58 Query: 71 ISAICAIVKFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHR 125 + II+LT D GL+ GA Y++K P EL IR+V R Sbjct: 59 CQELRKESDIP-IIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLR 112 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 55.5 bits (132), Expect = 1e-10 Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 13/164 (7%) Query: 8 RVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPEVEG 67 +VL+ DD R L ++ V+ +AENGE AIAL+E P V LMD++MP ++G Sbjct: 419 KVLVVDDRPESRLLLRQLLTSLGF--VVQEAENGEMAIALWESWHPQVILMDMQMPVLDG 476 Query: 68 VAAISAICAIV--KFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLN------A 119 + I A + II LT + + L AG +L K P+EL+ A Sbjct: 477 RSTTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIALLAKHLA 536 Query: 120 IRTVHRGQKYIPPDVGAKLVQRLSNPELSERELEVLGSLAQGMS 163 + +GQ PP + ++ P LSE+ + S Q M+ Sbjct: 537 VALPSQGQ---PPASPLRPFPVITAPSLSEQLAKTPQSWRQKMA 577 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 55.1 bits (131), Expect = 2e-10 Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 4/152 (2%) Query: 8 RVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPEVEG 67 R+L+ +D+ I Q +A + RD V A NG A+ + + LMD++MPE++G Sbjct: 926 RILLVEDNEI-NQEVAAELLRDVGFNVDVAA-NGLIALERLNNNAYALVLMDMQMPEMDG 983 Query: 68 VAAISAICAIVKFAR--IIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHR 125 + A AI ++A+ I+ +T D R LQAG +L K EP+EL N + Sbjct: 984 IEATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEELWNKLLHWIP 1043 Query: 126 GQKYIPPDVGAKLVQRLSNPELSERELEVLGS 157 + P+ + S+PE+S + L S Sbjct: 1044 VDSPLAPETIEESAINTSDPEISIPHIPGLNS 1075 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 54.7 bits (130), Expect = 2e-10 Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 4/109 (3%) Query: 3 QATTIRVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRM 62 + ++L+ DD R L + ++ + A NGE+A+ F E +P+V L+D M Sbjct: 8 ETAAAKILVVDDDGFMRMQLRVYLQKEGHR--VELATNGEEALTKFAEIKPEVVLLDAVM 65 Query: 63 PEVEGVAAISAICAIVK--FARIIVLTTYDSDEDIYRGLQAGAKGYLLK 109 P ++G A A+ I + ++++T D + + R +AGA Y+ K Sbjct: 66 PVMDGFACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTK 114 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 52.8 bits (125), Expect = 9e-10 Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 4/121 (3%) Query: 9 VLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPEVEGV 68 +LI +D Q + + R+ ++ +GE + +F+E PD+ ++DL +P+++G+ Sbjct: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTN--DGETGLRIFQEQVPDLIVLDLMLPKLDGL 71 Query: 69 AAISAICAI--VKFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHRG 126 + I K I++LT + D GL GA YL+K P EL+ +R + R Sbjct: 72 EVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRALLRR 131 Query: 127 Q 127 Q Sbjct: 132 Q 132 >SYNE-PCC-01-002221 slr1213 Length = 241 Score = 51.6 bits (122), Expect = 2e-09 Identities = 28/114 (24%), Positives = 59/114 (51%), Gaps = 3/114 (2%) Query: 8 RVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMP-EVE 66 ++LI +D + Q +A ++ D ++ A +G A+ E PD+ L+D+R+ E++ Sbjct: 4 KILIVEDERLVAQHIAQLLKSD-GYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEID 62 Query: 67 GVAAISAICAIVKFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAI 120 G+ I ++ I+ LT + E + R + +GY++K ++LL+ + Sbjct: 63 GIEVAERIKSLYSIP-IVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTV 115 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 51.6 bits (122), Expect = 2e-09 Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 4/126 (3%) Query: 8 RVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPEVEG 67 R+LI DD ++ IN + + QA +G + AL + QPD+ ++DL +P+V+G Sbjct: 3 RILIIDDDPAISDLVS--INLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDG 60 Query: 68 VAAISAICAIVKFARI--IVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHR 125 + + A I ++LT +D +G +GA YL K + +E+L +R + R Sbjct: 61 FTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLR 120 Query: 126 GQKYIP 131 IP Sbjct: 121 RTDRIP 126 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 51.2 bits (121), Expect = 2e-09 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 2/121 (1%) Query: 9 VLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPEVEGV 68 +L+ DD + L+ + I A+ G+ +A+ Q D+ ++D +P+V G+ Sbjct: 4 ILLVDDENALTEPLSKALGHQG--HTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGL 61 Query: 69 AAISAICAIVKFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHRGQK 128 I + ++ LT D+ +D GL AG YL+K E ELL +R + R Q Sbjct: 62 EICRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFELRELLARVRALLRRQS 121 Query: 129 Y 129 + Sbjct: 122 H 122 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 48.9 bits (115), Expect = 1e-08 Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 4/126 (3%) Query: 5 TTIRVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPE 64 TT ++L+ +D + R L I + + + +AENG + + H ++ +MD+ +P Sbjct: 2 TTPKILVVEDEIVTRNTLKGIF--EAEGYDVFEAENGVEMHHILANHNINLVVMDINLPG 59 Query: 65 VEGVAAISAICAIVKFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDEL-LNAIRTV 123 G+ + + +I LT D++ D GL+ GA YL K P EL + A + Sbjct: 60 KNGLLLARELREELSLP-LIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLL 118 Query: 124 HRGQKY 129 HR + Sbjct: 119 HRAMPH 124 >SYNE-PCC-01-002951 ssl0564 Length = 89 Score = 47.4 bits (111), Expect = 4e-08 Identities = 25/63 (39%), Positives = 41/63 (65%) Query: 147 LSERELEVLGSLAQGMSNADIATALSIGEGTVKSHVNRILNKLDVGDRTQAVIVAVKRGI 206 LS+RELE+L +A G++N +++ L I + TV +HV+ IL K + +R + V A++ G Sbjct: 12 LSDRELEILDLVAIGLTNQEVSERLEISKRTVDNHVSNILTKTNTENRVELVRWALQWGK 71 Query: 207 VSL 209 V L Sbjct: 72 VCL 74 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 45.8 bits (107), Expect = 1e-07 Identities = 30/118 (25%), Positives = 60/118 (50%), Gaps = 5/118 (4%) Query: 7 IRVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPEVE 66 +++L+A+D+ + ++ ++N +A A NG++ I E+ D+ LMD++MP ++ Sbjct: 1190 LQILLAEDNLVNQKVAHQMLNNLG--YPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMD 1247 Query: 67 GVAA---ISAICAIVKFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIR 121 G+ A I + + RI+ +T D L AG GY+ K ++L ++ Sbjct: 1248 GITACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQLRKVLQ 1305 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 45.4 bits (106), Expect = 1e-07 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 3/132 (2%) Query: 40 NGEQAIALFEEHQPDVTLMDLRMPEVEGVAAISAI--CAIVKFARIIVLTTYDSDEDIYR 97 +G +A+ + QPD+ L+DL MP ++G+ + + +I LT + +D+ + Sbjct: 49 SGPEALQRVTQAQPDLILLDLMMPGMDGLEVCDRLKQDPQTRDIPVIFLTASNEKQDLLQ 108 Query: 98 GLQAGAKGYLLKETEPDELLNAIRTVHRGQKYIPPDVGAKLVQRLSNPELSERELEVLGS 157 GA Y+ K P ELL ++T H K ++ L+++ E LG Sbjct: 109 AFAKGAVDYVTKPFSPPELLARVKT-HLELKQTRDNLHHTLLEQARTAEALACTSTRLGI 167 Query: 158 LAQGMSNADIAT 169 L Q M + T Sbjct: 168 LVQNMQAGVLMT 179 Score = 44.7 bits (104), Expect = 2e-07 Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 5/121 (4%) Query: 4 ATTIRVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMP 63 ++ + +L+A+D+ I +Q ++ + + NG++A++ + DV LMD+ MP Sbjct: 737 SSNLTILLAEDNLINQQVAKLLLKKLG--YPVDVVNNGQEALSALAKGDYDVVLMDVEMP 794 Query: 64 EVEGVAAISAICAIVKFAR---IIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAI 120 E++G+ A I + II +T Y + D R L +G Y+ K + L A+ Sbjct: 795 EMDGLTATEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKPIRLEALQQAL 854 Query: 121 R 121 + Sbjct: 855 Q 855 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 45.4 bits (106), Expect = 1e-07 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 5/122 (4%) Query: 6 TIRVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPEV 65 T ++LI +D R+ +A +++ + +A + + AI +E+ P + L+D +P Sbjct: 2 TRKILIVEDECAIREMIALFLSQK--YYDVIEASDFKTAINKIKEN-PKLILLDWMLPGR 58 Query: 66 EGVAAISAICAIVKFARI--IVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTV 123 G+ I I +A I I+LT ++ED L AGA Y+ K P LL I V Sbjct: 59 SGIQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAV 118 Query: 124 HR 125 R Sbjct: 119 WR 120 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 45.1 bits (105), Expect = 2e-07 Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 4/119 (3%) Query: 9 VLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPEVEGV 68 VL+ +D + R+ ++ I+ +D QV + G +A+ + PD+ ++D+ MP + G Sbjct: 30 VLLVEDSSSQREMISGIL-KDHGWQVTIACD-GVEALEKLQNFSPDLVVLDIVMPRMNGY 87 Query: 69 AAISAICAIVKFARIIVLTTYDSDEDIYR--GLQAGAKGYLLKETEPDELLNAIRTVHR 125 I + K + V+ E+ R G++ GA Y+ K +P EL+ I+ + R Sbjct: 88 EVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLLR 146 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 43.1 bits (100), Expect = 7e-07 Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 12/136 (8%) Query: 1 MSQATTIRVLIADDHAIFRQGLATII-NRDPDMQVIAQAENGEQAIALFEEHQPDVTLMD 59 ++Q +L+ +D+ I R+ ++ ++ +QV A NG++A+ L + D LMD Sbjct: 712 ITQLEGASILLVEDNEINREFAHDLLTSKGLRVQV---ANNGQEALTLLTSNTYDAILMD 768 Query: 60 LRMPEVEGVAAISAI--CAIVKFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELL 117 ++MP + G A AI + II +T D + L AG +L K +PD L Sbjct: 769 IQMPMLNGYDATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLF 828 Query: 118 NAIRTVHRGQKYIPPD 133 + +IPP+ Sbjct: 829 QTL------AHWIPPN 838 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 42.7 bits (99), Expect = 9e-07 Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 4/118 (3%) Query: 8 RVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPEVEG 67 +VL+ +D+ + R L+ + R VIA +GEQA+ + P + LMD+ +P ++G Sbjct: 6 KVLLVEDNEMNRDMLSRRLIRKGYEVVIAV--DGEQAVTMAISESPQLILMDMSLPIIDG 63 Query: 68 VAAISAICAIVKFAR--IIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTV 123 A I A II LT + D R + AG Y K E LL + + Sbjct: 64 WTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEAL 121 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 42.0 bits (97), Expect = 2e-06 Identities = 27/119 (22%), Positives = 56/119 (47%), Gaps = 2/119 (1%) Query: 7 IRVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPEVE 66 +R+L+ +D + LA ++ + + A + A + D+ ++D+ +PE++ Sbjct: 1 MRILLVEDDLPLAETLAEALS--DQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELD 58 Query: 67 GVAAISAICAIVKFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHR 125 G+ + I+++T D+ D GL AGA Y++K + EL +R + R Sbjct: 59 GITLCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLR 117 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 40.4 bits (93), Expect = 4e-06 Identities = 23/87 (26%), Positives = 42/87 (48%) Query: 35 IAQAENGEQAIALFEEHQPDVTLMDLRMPEVEGVAAISAICAIVKFARIIVLTTYDSDED 94 ++ A +G + +E PD+ +++ +P + G+ + + II++T D E+ Sbjct: 29 VSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLELCRRLREMGSRIPIILITAKDDVEE 88 Query: 95 IYRGLQAGAKGYLLKETEPDELLNAIR 121 GL AGA Y++K DE IR Sbjct: 89 RVMGLDAGADDYIVKPFNSDEFFARIR 115 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 39.7 bits (91), Expect = 8e-06 Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 4/128 (3%) Query: 7 IRVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTL--MDLRMPE 64 +R+L+ +D L + R+ V+ ++G A + ++ + TL D +P Sbjct: 1 MRLLLVEDEPDLGMALEKALRREN--YVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPG 58 Query: 65 VEGVAAISAICAIVKFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVH 124 + G+ + I++LT D D GL AGA YL+K ELL +R++ Sbjct: 59 LSGLELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAELLARLRSLQ 118 Query: 125 RGQKYIPP 132 R + P Sbjct: 119 RRSPELQP 126 >SYNE-PCC-01-000877 sll1330 Length = 250 Score = 39.3 bits (90), Expect = 1e-05 Identities = 45/190 (23%), Positives = 80/190 (42%), Gaps = 21/190 (11%) Query: 34 VIAQAENGEQAIALFEEHQPDVTLMDLRMPEVEGVAAISAICAIVKFARIIVLTTYDSDE 93 ++ Q QA F P + ++D + + +G+ + + + I +L+ D+++ Sbjct: 29 LVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGDGIELCRWLYQQHQ-SMIFILSAKDTEK 87 Query: 94 DIYRGLQAGAKGYLLKETEPDELLNAIRTVHRGQKYIPP----DVGA---KLVQRL---- 142 DI GL+AGA YL K E L I + R + + D G LVQR Sbjct: 88 DIVHGLKAGADDYLTKPFGMQEFLARIECLIRRVRTVAAPLLLDYGVLKIDLVQRRVEYQ 147 Query: 143 -SNPELSERELEVLGSLAQGMSNADIATAL--------SIGEGTVKSHVNRILNKLDVGD 193 + +L+ +E +L L Q +A T L T+ +HV + K++ Sbjct: 148 GNFVDLTPQEFSLLYVLTQAEGSALSRTELLRRAWPEAIDNPRTIDTHVLSLRKKIETDP 207 Query: 194 RTQAVIVAVK 203 R ++I V+ Sbjct: 208 RQPSLIQTVR 217 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.318 0.135 0.365 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 17,567 Number of Sequences: 78 Number of extensions: 695 Number of successful extensions: 53 Number of sequences better than 1.0e-05: 31 Number of HSP's better than 0.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 23 Number of HSP's gapped (non-prelim): 34 length of query: 209 length of database: 48,235 effective HSP length: 59 effective length of query: 150 effective length of database: 43,633 effective search space: 6544950 effective search space used: 6544950 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 90 (39.3 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-001690 slr0473 (748 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-001690 slr0473 1496 0.0 SYNE-PCC-01-000295 sll0474 92 7e-21 SYNE-PCC-01-001517 slr0222 91 1e-20 SYNE-PCC-01-001306 sll1905 91 2e-20 SYNE-PCC-01-000800 sll1228 89 5e-20 SYNE-PCC-01-002879 slr2104 89 6e-20 SYNE-PCC-01-002873 slr2098 89 6e-20 SYNE-PCC-01-000542 sll0821 87 2e-19 SYNE-PCC-01-001509 slr0210 86 4e-19 SYNE-PCC-01-001280 sll1871 86 4e-19 SYNE-PCC-01-000891 sll1353 82 4e-18 SYNE-PCC-01-002617 slr1759 81 1e-17 SYNE-PCC-01-001294 sll1888 79 6e-17 SYNE-PCC-01-000985 sll1475 76 3e-16 SYNE-PCC-01-002778 slr1969 74 1e-15 SYNE-PCC-01-001132 sll1672 71 1e-14 SYNE-PCC-01-002220 slr1212 57 2e-10 SYNE-PCC-01-000983 sll1473 43 4e-06 >SYNE-PCC-01-001690 slr0473 Length = 748 Score = 1496 bits (3873), Expect = 0.0 Identities = 748/748 (100%), Positives = 748/748 (100%) Query: 1 MATTVQLSDQSLRQLETLAIHTAHLIQPHGLVVVLQEPDLTISQISANCTGILGRSPEDL 60 MATTVQLSDQSLRQLETLAIHTAHLIQPHGLVVVLQEPDLTISQISANCTGILGRSPEDL Sbjct: 1 MATTVQLSDQSLRQLETLAIHTAHLIQPHGLVVVLQEPDLTISQISANCTGILGRSPEDL 60 Query: 61 LGRTLGEVFDSFQIDPIQSRLTAGQISSLNPSKLWARVMGDDFVIFDGVFHRNSDGLLVC 120 LGRTLGEVFDSFQIDPIQSRLTAGQISSLNPSKLWARVMGDDFVIFDGVFHRNSDGLLVC Sbjct: 61 LGRTLGEVFDSFQIDPIQSRLTAGQISSLNPSKLWARVMGDDFVIFDGVFHRNSDGLLVC 120 Query: 121 ELEPAYTSDNLPFLGFYHMANAALNRLRQQANLRDFYDVIVEEVRRMTGFDRVMLYRFDE 180 ELEPAYTSDNLPFLGFYHMANAALNRLRQQANLRDFYDVIVEEVRRMTGFDRVMLYRFDE Sbjct: 121 ELEPAYTSDNLPFLGFYHMANAALNRLRQQANLRDFYDVIVEEVRRMTGFDRVMLYRFDE 180 Query: 181 NNHGDVIAEDKRDDMEPYLGLHYPESDIPQPARRLFIHNPIRVIPDVYGVAVPLTPAVNP 240 NNHGDVIAEDKRDDMEPYLGLHYPESDIPQPARRLFIHNPIRVIPDVYGVAVPLTPAVNP Sbjct: 181 NNHGDVIAEDKRDDMEPYLGLHYPESDIPQPARRLFIHNPIRVIPDVYGVAVPLTPAVNP 240 Query: 241 STNRAVDLTESILRSAYHCHLTYLKNMGVGASLTISLIKDGHLWGLIACHHQTPKVIPFE 300 STNRAVDLTESILRSAYHCHLTYLKNMGVGASLTISLIKDGHLWGLIACHHQTPKVIPFE Sbjct: 241 STNRAVDLTESILRSAYHCHLTYLKNMGVGASLTISLIKDGHLWGLIACHHQTPKVIPFE 300 Query: 301 LRKACEFFGRVVFSNISAQEDTETFDYRVQLAEHEAVLLDKMTTAADFVEGLTNHPDRLL 360 LRKACEFFGRVVFSNISAQEDTETFDYRVQLAEHEAVLLDKMTTAADFVEGLTNHPDRLL Sbjct: 301 LRKACEFFGRVVFSNISAQEDTETFDYRVQLAEHEAVLLDKMTTAADFVEGLTNHPDRLL 360 Query: 361 GLTGSQGAAICFGEKLILVGETPDEKAVQYLLQWLENREVQDVFFTSSLSQIYPDAVNFK 420 GLTGSQGAAICFGEKLILVGETPDEKAVQYLLQWLENREVQDVFFTSSLSQIYPDAVNFK Sbjct: 361 GLTGSQGAAICFGEKLILVGETPDEKAVQYLLQWLENREVQDVFFTSSLSQIYPDAVNFK 420 Query: 421 SVASGLLAIPIARHNFLLWFRPEVLQTVNWGGDPNHAYEATQEDGKIELHPRQSFDLWKE 480 SVASGLLAIPIARHNFLLWFRPEVLQTVNWGGDPNHAYEATQEDGKIELHPRQSFDLWKE Sbjct: 421 SVASGLLAIPIARHNFLLWFRPEVLQTVNWGGDPNHAYEATQEDGKIELHPRQSFDLWKE 480 Query: 481 IVRLQSLPWQSVEIQSALALKKAIVNLILRQAEELAQLARNLERSNADLKKFAYIASHDL 540 IVRLQSLPWQSVEIQSALALKKAIVNLILRQAEELAQLARNLERSNADLKKFAYIASHDL Sbjct: 481 IVRLQSLPWQSVEIQSALALKKAIVNLILRQAEELAQLARNLERSNADLKKFAYIASHDL 540 Query: 541 QEPLNQVSNYVQLLEMRYSEALDEDAKDFIDFAVTGVSLMQTLIDDILTYAKVDTQYAQL 600 QEPLNQVSNYVQLLEMRYSEALDEDAKDFIDFAVTGVSLMQTLIDDILTYAKVDTQYAQL Sbjct: 541 QEPLNQVSNYVQLLEMRYSEALDEDAKDFIDFAVTGVSLMQTLIDDILTYAKVDTQYAQL 600 Query: 601 TFTDVQEVVDKALANLKQRIEESGAEIEVGSMPAVMADQIQLMQVFQNLIANGIKFAGDK 660 TFTDVQEVVDKALANLKQRIEESGAEIEVGSMPAVMADQIQLMQVFQNLIANGIKFAGDK Sbjct: 601 TFTDVQEVVDKALANLKQRIEESGAEIEVGSMPAVMADQIQLMQVFQNLIANGIKFAGDK 660 Query: 661 SPKIKIWGDRQEDAWVFAVQDNGIGIDPQFFERIFVIFQRLHTRDEYKGTGMGLAICKKI 720 SPKIKIWGDRQEDAWVFAVQDNGIGIDPQFFERIFVIFQRLHTRDEYKGTGMGLAICKKI Sbjct: 661 SPKIKIWGDRQEDAWVFAVQDNGIGIDPQFFERIFVIFQRLHTRDEYKGTGMGLAICKKI 720 Query: 721 IEGHQGQIWLESNPGEGSTFYFSIPIGN 748 IEGHQGQIWLESNPGEGSTFYFSIPIGN Sbjct: 721 IEGHQGQIWLESNPGEGSTFYFSIPIGN 748 >SYNE-PCC-01-000295 sll0474 Length = 806 Score = 91.7 bits (226), Expect = 7e-21 Identities = 71/254 (27%), Positives = 123/254 (48%), Gaps = 17/254 (6%) Query: 509 LRQAEELAQLARNLERSNADLK-KFAYIASHDLQEPLNQVSNYVQLLEMRYSEALDEDAK 567 +++AEE +L+ + LK +F SH+L+ PLN + ++ L+ + L+ Sbjct: 397 IKKAEEQLKLSNKILAKATQLKDEFLANMSHELRTPLNSILGMIETLQNQVYGPLNGKQV 456 Query: 568 DFIDFAVTGVSLMQTLIDDILTYAKVDTQYAQLTF--TDVQEVVDKALANLKQRIEESGA 625 ++ + +LI+DIL +K++ L T V +V+ +L ++Q + Sbjct: 457 QSLEIVENSGRHLLSLINDILDLSKIEAGRMDLDLNPTSVSALVNHSLTFVQQFAIQKQI 516 Query: 626 EIE---VGSMPAVMADQIQLMQVFQNLIANGIKFAGD------KSPKIKIWGDRQEDA-- 674 + + ++P V+ D+ +L QV NL+ N IKF + ++ IK G + Sbjct: 517 NLSSEIIPNLPDVLVDKRRLCQVLINLLNNAIKFTPEGGKVVVQADLIKEQGKENSQSPP 576 Query: 675 -WVFAVQDNGIGIDPQFFERIFVIFQRLHT--RDEYKGTGMGLAICKKIIEGHQGQIWLE 731 F V D GIGI+ IF F ++ + Y GTG+GL++ KKI+E H G + + Sbjct: 577 QLSFTVFDTGIGIEADRLNNIFEPFVQIDSALNRRYDGTGLGLSLVKKIVELHGGSVTVT 636 Query: 732 SNPGEGSTFYFSIP 745 S EGS F +IP Sbjct: 637 SKLNEGSRFKITIP 650 >SYNE-PCC-01-001517 slr0222 Length = 1178 Score = 90.9 bits (224), Expect = 1e-20 Identities = 63/248 (25%), Positives = 119/248 (47%), Gaps = 7/248 (2%) Query: 504 IVNLILRQAEELAQLARNLERSNADLKKFAYIASHDLQEPLNQVSNYVQLLEMRYSEALD 563 I ++ + E L L + E + A +F I SH+ + PL + + +LL + Sbjct: 916 ITDIKRAEIETLRSLVKERELNEAK-SQFVDIVSHEFRTPLTSIIGFGELLSKYFDRLST 974 Query: 564 EDAKDFIDFAVTGVSLMQTLIDDILTYAKVDTQYAQLTFTDV--QEVVDKALANLKQRI- 620 E + +I+ ++ LIDD+L+ ++ D ++ ++ + + + + N + Sbjct: 975 EKKQQYINNIQNSSQRLKQLIDDVLSISRYDANKIEIELGNINLRNLANDLIENFSCGLG 1034 Query: 621 EESGAEIEVGSMPAV--MADQIQLMQVFQNLIANGIKFAGDKSPKIKIWGDRQEDAWVFA 678 E E+ P + D L + +N+++N IK++ S I + + E+ +F Sbjct: 1035 SEHNFELNYHLKPDEHSLVDVRLLRHILENILSNAIKYSAPGST-ITLDISKDEEHLLFQ 1093 Query: 679 VQDNGIGIDPQFFERIFVIFQRLHTRDEYKGTGMGLAICKKIIEGHQGQIWLESNPGEGS 738 V+D GIGI Q E++F F R + GTG+GL+I K+ +E G I + S PG+G+ Sbjct: 1094 VRDEGIGIPLQDQEKLFEAFHRASNVGDIPGTGLGLSIVKRYVEFQGGTIEVISMPGKGT 1153 Query: 739 TFYFSIPI 746 T +P+ Sbjct: 1154 TMVIKLPL 1161 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 90.5 bits (223), Expect = 2e-20 Identities = 85/340 (25%), Positives = 144/340 (42%), Gaps = 35/340 (10%) Query: 434 HNFLLWFRPEVLQTVNWGGDPNHAYEATQEDGKIELHPRQSFDLWKEIVRLQSLPWQSVE 493 HNFL PE L V + +E + + F L+++I + + + + ++ Sbjct: 229 HNFLAIESPEPLLKVELALEDGRFFERDYVPIMLGDSSQGHFWLYRDISQRKQV--EMIQ 286 Query: 494 IQSALALKKAIVNLILRQAEELAQLARNLERSNADLKKFAYIASHDLQEPLNQVSNYVQL 553 QS L +++ + + Q +EL E +N +F SH+++ P+N + L Sbjct: 287 GQS-LEMERRMRQQLAEQNQELVAATTAAEAANRSKSEFLATMSHEIRTPMNAIIGMTGL 345 Query: 554 LEMRYSEALDEDAKDFIDFAVTGVSLMQTLIDDILTYAKVDTQYAQLTFTD------VQE 607 L L K F + TLI+DIL ++K++ L ++E Sbjct: 346 L---LDTDLTTQQKYFAQTIRNSGETLLTLINDILDFSKIEAGKLDLEVYPFDLGQCLEE 402 Query: 608 VVDKALANLKQRIEESGAEIEVGSMPAVMADQIQLMQVFQNLIANGIKFAGDKSPKIKIW 667 +D + + +Q+ P + D +L Q+ NL++N +KF K+ + Sbjct: 403 ALDVVVPSARQKSLTLIRRFLTPIPPNLQGDVTRLRQILVNLLSNAVKFTEAGQVKVTVE 462 Query: 668 -----GDRQEDAWVFAVQDNGIGIDPQFFERIFVIFQRLHTR--DEYKGTGMGLAICKKI 720 + E FAVQD GIGI P + +F F + ++ + GTG+GLAIC ++ Sbjct: 463 VVDHDAAKGEYQICFAVQDTGIGIAPNQQQALFQAFSQGNSSITRRFGGTGLGLAICVRL 522 Query: 721 IEGHQGQIWLESN----------------PGEGSTFYFSI 744 G IW ESN EGSTFYF++ Sbjct: 523 TALMGGTIWAESNGCVVGNPPELWQIGQPTIEGSTFYFTV 562 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 89.0 bits (219), Expect = 5e-20 Identities = 83/266 (31%), Positives = 123/266 (46%), Gaps = 25/266 (9%) Query: 497 ALALKKAIVNLILRQAEELAQLARNLERSNADLKKFAYIASHDLQEPLNQVSNYVQLLEM 556 A+A + L QA+E A A N +F SH+L+ PLN + + QLL Sbjct: 137 AIAQARHQAETTLTQAKEAADAA------NRAKTEFLASISHELRTPLNAIIGFSQLLHR 190 Query: 557 RYSEALDEDAKDFIDFAVTGVSLMQTLIDDILTYAKVDTQYAQLT--FTDVQEVVDKALA 614 S A D I+ + G L++ LI+DIL +K++ L D ++D A Sbjct: 191 DPSLAPHRPTLDIINRS--GEHLLE-LINDILEMSKIEAGRTTLNEKIIDCHRLLDNLQA 247 Query: 615 NLKQRIEESGAEIEVGSMPAV----MADQIQLMQVFQNLIANGIKFA--GDKSPKIKIWG 668 + R +E ++V P V D +L QV NL+AN IKF G + K+K Sbjct: 248 LFQLRAQEKQLLLKVERSPEVPEWIKTDGGKLRQVLINLLANAIKFTAQGGVTLKVKCLT 307 Query: 669 DRQEDA------WV-FAVQDNGIGIDPQFFERIFVIFQRLHTR-DEYKGTGMGLAICKKI 720 Q D W+ F V D G GI + +FV F + T +G G+GL I +K Sbjct: 308 APQTDEGQGASIWLHFLVSDTGPGIAAHEMDELFVPFAQTETGLKSCQGNGLGLPISQKF 367 Query: 721 IEGHQGQIWLESNPGEGSTFYFSIPI 746 ++ GQI + S +GS F+F+IP+ Sbjct: 368 VQLMGGQIQVRSKVDQGSAFFFAIPV 393 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 88.6 bits (218), Expect = 6e-20 Identities = 66/243 (27%), Positives = 120/243 (49%), Gaps = 16/243 (6%) Query: 518 LARNLERSNADLKKFAYIA--SHDLQEPLNQVSNYVQLLEMRYSEALDEDAKDFIDFAVT 575 L L A K ++A SH+++ P+N + + + E+ L ++++ Sbjct: 445 LEAKLVAEGATKAKSEFLANMSHEIRTPMNAI---IGMSELVLQTDLTSQQRNYLQKVQY 501 Query: 576 GVSLMQTLIDDILTYAKVDTQYAQLTFT--DVQEVVDKALANLKQRIEESGA----EIEV 629 L+ +I++IL ++K++ +L V+EV+ + L + E G ++ Sbjct: 502 AGELLLGIINNILDFSKMEAGKLELEQKPFSVEEVMGNLHSILGIQAEAKGLTLNFHLDP 561 Query: 630 GSMPAVMADQIQLMQVFQNLIANGIKFAGDKSPKIK---IWGDRQEDAWVFAVQDNGIGI 686 P ++ D+++L Q+ NL N +KF I+ + + ++ F+V D GIG+ Sbjct: 562 RIPPILVGDRLRLSQILINLGNNAVKFTNQGEITIRGQLLKTENEQTKLQFSVTDTGIGL 621 Query: 687 DPQFFERIFVIFQR--LHTRDEYKGTGMGLAICKKIIEGHQGQIWLESNPGEGSTFYFSI 744 P ++F F + T +Y GTG+GLAI K + E G IWLES G+GSTF+F++ Sbjct: 622 TPDQQSKLFQWFNQGETSTSRQYGGTGLGLAISKSLTELMGGDIWLESVVGQGSTFHFTV 681 Query: 745 PIG 747 +G Sbjct: 682 CLG 684 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 88.6 bits (218), Expect = 6e-20 Identities = 70/249 (28%), Positives = 124/249 (49%), Gaps = 24/249 (9%) Query: 509 LRQAEELAQLARNLERSNADLKKFAYIASHDLQEPLNQVSNYVQLLEMRYSEALDEDAKD 568 +++A+ELA+ A R AD F SH+++ P+N V + + + L ++ Sbjct: 513 MKRAKELAEEA---SRIKAD---FLANMSHEIRTPMNAV---IGMTHLALKTDLTPRQRE 563 Query: 569 FIDFAVTGVSLMQTLIDDILTYAKVDTQYAQLTFTDVQEVVDKALANLKQRIEESGA--- 625 ++ + +I+DIL ++K++ +L + +DK L N+ I E Sbjct: 564 YLHKIRFSGQHLLGVINDILDFSKIEA--GKLPMESIDFDLDKVLDNVATLISEKATNKG 621 Query: 626 -----EIEVGSMPAVMADQIQLMQVFQNLIANGIKFA--GDKSPKIKIWGDRQEDAWVF- 677 +I+ + D ++L Q+ N N +KF GD + +++ R +D ++ Sbjct: 622 LELLFDIDRNLPRHFIGDPLRLGQILINYANNAVKFTEQGDITIVVRLQEYRDQDVVLYL 681 Query: 678 AVQDNGIGIDPQFFERIFVIFQRLH--TRDEYKGTGMGLAICKKIIEGHQGQIWLESNPG 735 AV+D GIGI P+ +F FQ+ T + GTG+GLAICK+I E G++ +ES G Sbjct: 682 AVKDTGIGIKPEHIANLFNSFQQADSSTTRNFGGTGLGLAICKRIAELMGGEVGVESEYG 741 Query: 736 EGSTFYFSI 744 +GSTF+ + Sbjct: 742 QGSTFWAKV 750 >SYNE-PCC-01-000542 sll0821 Length = 1276 Score = 87.0 bits (214), Expect = 2e-19 Identities = 53/156 (33%), Positives = 82/156 (52%), Gaps = 9/156 (5%) Query: 144 LNRLRQQANLRDFYDVIVEEVRRMTGFDRVMLYRFDENNHGDVIAED-KRDDMEPYLGLH 202 +N+ + LR+ VIVEE R G DRV +Y+F + G+V+AE R + LGLH Sbjct: 15 INKFHRALTLRETLQVIVEEARIFLGVDRVKIYKFASDGSGEVLAEAVNRAALPSLLGLH 74 Query: 203 YPESDIPQPARRLFIHNPIRVIPDVYG---VAVPLTPAVNPSTNRAVDLTESILRSAYHC 259 +P DIP AR + + DV + L+ ++P+ + T + C Sbjct: 75 FPVEDIPPQAREELGNQRKMIAVDVAHRRKKSHELSGRISPTEHSNGHYT-----TVDSC 129 Query: 260 HLTYLKNMGVGASLTISLIKDGHLWGLIACHHQTPK 295 H+ YL MGV +SLT+ +++D LWG++A HH P+ Sbjct: 130 HIQYLLAMGVLSSLTVPVMQDQQLWGIMAVHHSKPR 165 Score = 52.0 bits (123), Expect = 6e-09 Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 25/152 (16%) Query: 145 NRLRQQANLRDFYDVIVEEVRRMTGFDRVMLYRFDENNHGDVIAEDKRDDMEPYLGLHYP 204 N++R N+ D V EVR+ DRV+L++F+ G V+ E D + Sbjct: 932 NKIRASLNINDILYSTVTEVRQFLNTDRVVLFKFNSQWSGQVVTESHNDFCRSIINDEID 991 Query: 205 ESDIPQPARRLFIHNPIRVIPDVYGVAVPLTPAVNPSTNRAVDLTESILRSAYHCHLTYL 264 + RL+ +R + D+ DL + CH L Sbjct: 992 DPCFKGHYLRLYREGRVRAVSDI----------------EKADLAD--------CHKELL 1027 Query: 265 KNMGVGASLTISLIKDGHLWGLIACHH-QTPK 295 ++ V A+L + ++ + +LWGL+ H +TP+ Sbjct: 1028 RHYQVKANLVVPVVFNENLWGLLIAHECKTPR 1059 >SYNE-PCC-01-001509 slr0210 Length = 417 Score = 85.9 bits (211), Expect = 4e-19 Identities = 56/217 (25%), Positives = 104/217 (47%), Gaps = 11/217 (5%) Query: 538 HDLQEPLNQVSNYVQLLEMRYSEALDEDAKDFIDFAVTGVSLMQTLIDDILTYAKVDTQY 597 H+ + PL + + ++L L+ ++ + + +L++D L +K+D + Sbjct: 195 HEFRTPLTAIIGFARMLRDELYGKLNPKQHQYVQGTLNSAEHLLSLVNDFLDLSKIDARC 254 Query: 598 AQLTFTDVQ------EVVDKALANLKQRIEESGAEIEVGSMPAVMADQIQLMQVFQNLIA 651 +L + V V+ K++ I+ G + DQ + Q+ NL++ Sbjct: 255 EELFYEQVAVEDLCLAVISMVQTKAKEKQLALNLTIDDG-VDFCYVDQRRWKQILINLLS 313 Query: 652 NGIKFAGDKSPKIKIWGDRQEDAWVFAVQDNGIGIDPQFFERIFVIFQRLHTRDEY--KG 709 NG+KF S + + + A +F+V D GIGIDP+ +F F+++ + KG Sbjct: 314 NGVKFTPKGSVTLAV--KATDKALIFSVIDTGIGIDPEDQRDLFQPFKQISHPPSFAEKG 371 Query: 710 TGMGLAICKKIIEGHQGQIWLESNPGEGSTFYFSIPI 746 TG+GLA+ +++ + H G I L S PG GS F +P+ Sbjct: 372 TGLGLALSRRLAQLHGGDIQLTSTPGVGSCFSAILPL 408 >SYNE-PCC-01-001280 sll1871 Length = 674 Score = 85.9 bits (211), Expect = 4e-19 Identities = 84/300 (28%), Positives = 150/300 (50%), Gaps = 32/300 (10%) Query: 473 QSFDLWKEIVRLQSLPWQSVEIQSALALKK-AIVNLILRQ-----AEELAQLARNLERSN 526 +SF+L +R + + + LA K+ A+ N L + EEL + LE ++ Sbjct: 369 KSFNLMTNELRESNSSLEKKNQELELAQKQLAVANSCLEEKVQQRTEELENTVKALELAS 428 Query: 527 ADLK-----KFAYIA--SHDLQEPLNQVSNYVQLLEMRYSEALDEDAKDFID----FAVT 575 ++ + K ++A SH+L+ PLN + Y ++L EA D D+++ + + Sbjct: 429 SEAEAANATKSIFLANMSHELRTPLNAIIGYSEML---IEEAEDLDSEELVPDLDKILRS 485 Query: 576 GVSLMQTLIDDILTYAKVDTQYAQL---TFTDVQEVVDKALANLKQRIEESGAEIEVG-- 630 G SL+ LI+D+L +K++ +L TF +++E++ L + ++ + ++EV Sbjct: 486 GKSLL-ALINDLLDISKIEAGKMELYLETF-NLKELIAGILDTISPLLKNNNNKLEVEIS 543 Query: 631 -SMPAVMADQIQLMQVFQNLIANGIKFAGDK--SPKIKIWGDRQEDAWVFAVQDNGIGID 687 V D I+L Q NL++N KF D S ++ + ++D F V+D GIG+ Sbjct: 544 LESEEVYGDLIKLRQGILNLLSNASKFTKDGIISFIVEEFKVDEKDWLSFQVKDTGIGLT 603 Query: 688 PQFFERIFVIFQRLH--TRDEYKGTGMGLAICKKIIEGHQGQIWLESNPGEGSTFYFSIP 745 + ++F F + T +Y GTG+GLAI +K + G I+L S G GS+F +P Sbjct: 604 EEQMSKLFQPFTQADSSTTRKYGGTGLGLAITRKFCQMMGGDIYLTSEIGVGSSFTIKLP 663 >SYNE-PCC-01-000891 sll1353 Length = 998 Score = 82.4 bits (202), Expect = 4e-18 Identities = 67/256 (26%), Positives = 122/256 (47%), Gaps = 23/256 (8%) Query: 505 VNLILRQAEELAQLARNLERSNADLKKFAYIASHDLQEPLNQVSNYVQLLEMRYSEALDE 564 + + LR+A+E A+LA ++ +F SH+++ P+N + + LL + + Sbjct: 582 IEIKLREAKESAELANRVK------SEFLANISHEIRTPMNAILGFCDLLLQK--DLSLS 633 Query: 565 DAKDFIDFAVTGVSLMQTLIDDILTYAKVDTQYAQLTFTDVQ-EVVDKALANLKQRIEES 623 K +++ + ++ LIDDIL +K++ + V V+ + + + ES Sbjct: 634 QTKKYLNAIGSSSKILLALIDDILDISKIEAGKLVIHLEPVDLRVIIREIKQIFDYKAES 693 Query: 624 GA-----EIEVGSMPAVMADQIQLMQVFQNLIANGIKFAGDKSPKIKIWGD----RQEDA 674 + +I+ A+ D ++L Q+ NL+ N +KF + I I + R + Sbjct: 694 KSLLLTIQIDETLNQAIYFDAVRLRQILFNLVGNALKFTEEGQVFIYIGVEGIQVRSQGT 753 Query: 675 WV---FAVQDNGIGIDPQFFERIFVIFQRLHTRD--EYKGTGMGLAICKKIIEGHQGQIW 729 ++ V D GIGI P+ +IF +F + + +Y GTG+GL I +++ G+I Sbjct: 754 YISLAIEVTDTGIGIAPEDQAKIFDVFTQSQGQSTRKYGGTGLGLTITRRLTALLGGEIS 813 Query: 730 LESNPGEGSTFYFSIP 745 L S GEGSTF P Sbjct: 814 LSSRLGEGSTFILHFP 829 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 80.9 bits (198), Expect = 1e-17 Identities = 79/314 (25%), Positives = 138/314 (43%), Gaps = 41/314 (13%) Query: 464 DGKIELHPRQSFDLWK--EIVRLQSLPWQ-SVEIQSALALKKAIVNLILRQAEELAQLAR 520 +G I LH +W EI L+++ Q + + A L+K + ELAQ Sbjct: 708 NGIIALHQCDRQRVWTADEIELLEAIAEQMGIALAQAALLEKE-----RERRRELAQKNL 762 Query: 521 NLERS-------NADLKKFAYIASHDLQEPLNQVSNYVQLLEMRYSEALDEDAKDFIDFA 573 LE++ N +F + SH+++ P+N V +LL M L+ D++ Sbjct: 763 ELEKATWAAEAANRAKGEFLAMMSHEIRTPMNGVIGMTELLIMT---DLNLQQLDYVQTI 819 Query: 574 VTGVSLMQTLIDDILTYAKVDTQYAQLTFT--DVQEVVDKALANLKQRIEESGAEIEVGS 631 + T+I+DIL ++K++ L +++ +++ L E+ G Sbjct: 820 RQSGETLLTIINDILDFSKIEADKLVLETQAFELRPLIETVLEMFGPIARAKHLELTYGI 879 Query: 632 MPA----VMADQIQLMQVFQNLIANGIKFAGDKSPKIKIWGDRQEDAW------------ 675 P ++ DQ++L Q+ NLI N +KF + + G+ + A Sbjct: 880 DPQTPARILGDQVRLRQILSNLIGNALKFTEKGEVVLTVKGEPFDPAESYHTILNLPHPS 939 Query: 676 ---VFAVQDNGIGIDPQFFERIFVIFQRLH--TRDEYKGTGMGLAICKKIIEGHQGQIWL 730 F ++D GIGI +R+F F ++ T +Y GTG+GL I +++ + G + + Sbjct: 940 HRICFNLRDTGIGIPLDRQDRLFKSFSQVDSSTTRKYGGTGLGLVISQRLTQMMGGVLTV 999 Query: 731 ESNPGEGSTFYFSI 744 S PG GS F F I Sbjct: 1000 TSEPGVGSNFRFCI 1013 >SYNE-PCC-01-001294 sll1888 Length = 432 Score = 78.6 bits (192), Expect = 6e-17 Identities = 67/253 (26%), Positives = 122/253 (48%), Gaps = 25/253 (9%) Query: 513 EELAQLARNLERSNADLKKFAYIASHDLQEPLNQVSNYVQLL--EMRYSEALDEDAKDFI 570 +EL Q + E ++ +F +H+L+ PLN + +++L+ +M SEA + +F+ Sbjct: 178 QELTQATKAAEEASRLKSEFLASTTHELRTPLNGIIGFLRLILDDMADSEA---EKHEFV 234 Query: 571 DFAVTGVSLMQTLIDDILTYAKVDTQYA--QLTFTDVQEVVDKALANLKQRIEESGAEIE 628 + A L+ LI+DIL AK++ +L D EV+ + + G Sbjct: 235 EEAYQSALLLLNLINDILDLAKIEAGRVGIELEVVDFSEVLQATENFALPQAQNKGLSFN 294 Query: 629 VGSMP----AVMADQIQLMQVFQNLIANGIKF--------AGDKSPKIKIW-GDRQEDAW 675 + + V +Q L+QV N++ N IKF A + P+ +W G ++ Sbjct: 295 LTAPNQGPLLVYGNQRWLLQVMLNIVGNAIKFTHEGGITVAVEVMPRTVLWEGVQKPGLL 354 Query: 676 VFAVQDNGIGIDPQFFERIFVIFQRL---HTRDEYKGTGMGLAICKKIIEGHQGQI-WLE 731 +V D GIG+ + ++F F ++ H++ Y GTG+GL I +K++E G++ + Sbjct: 355 KVSVGDTGIGVSLEQQSKLFKKFVQIDGSHSK-AYGGTGLGLVISQKLVETMGGKVAFFS 413 Query: 732 SNPGEGSTFYFSI 744 G GST F++ Sbjct: 414 MGEGLGSTVTFTV 426 >SYNE-PCC-01-000985 sll1475 Length = 297 Score = 76.3 bits (186), Expect = 3e-16 Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 7/236 (2%) Query: 510 RQAEELAQLARNLERSNADLK-KFAYIASHDLQEPLNQVSNYVQLLEMRYSEALDEDAKD 568 R+ E +LA E+ + LK +F +ASH+ + PL+ QLLE LD D + Sbjct: 49 RRRTEEVRLALEREKELSRLKTRFFSMASHEFRTPLSTALAAAQLLENSEVAWLDPDKRS 108 Query: 569 F-IDFAVTGVSLMQTLIDDILTYAKVDTQYAQLT--FTDVQEVVDKALANLKQRIEESGA 625 + V M L+DDIL + + + + D++ + + + ++ + + Sbjct: 109 RNLHRIQNSVKNMVQLLDDILIINRAEAGKLEFNPNWLDLKLLFQQFIEEIQLSVSDQYY 168 Query: 626 EIEVGSMPAVMA--DQIQLMQVFQNLIANGIKFAGDKSPKIKIWGDRQEDAWVFAVQDNG 683 + S A D+ + + NL++N IK++ +IKI + +F V D G Sbjct: 169 FDFICSAQDTKALVDERLVRSILSNLLSNAIKYSPGGG-QIKIALSLDSEQIIFEVTDQG 227 Query: 684 IGIDPQFFERIFVIFQRLHTRDEYKGTGMGLAICKKIIEGHQGQIWLESNPGEGST 739 IGI P+ ++IF F R GTG+GL + KK ++ H G I L+S +G+T Sbjct: 228 IGISPEDQKQIFEPFHRGKNVRNITGTGLGLMVAKKCVDLHSGSILLKSAVDQGTT 283 >SYNE-PCC-01-002778 slr1969 Length = 750 Score = 74.3 bits (181), Expect = 1e-15 Identities = 83/304 (27%), Positives = 135/304 (44%), Gaps = 34/304 (11%) Query: 470 HPRQSFDLWKE----------IVRLQSLPWQSVEIQSALALKKAIVNLILRQAEELAQLA 519 HPRQ D K + +QSL + V+ Q K ++ + +EL Sbjct: 315 HPRQWLDSEKNFLGQIGEHLAVAIVQSLLYSEVQKQ-----KNNFEKRVIERTKELRDTL 369 Query: 520 RNLERSNADLKKFAYIASHDLQEPLNQVSNY-VQLLEMRYSEALDEDAKD---FIDFAVT 575 + +N +F SH+L+ PL + LL A AK ++ Sbjct: 370 MAAQAANLLKSQFINNISHELRTPLTSIIGLSATLLRWFDHPASLPPAKQQYYLLNIQEN 429 Query: 576 GVSLMQTLIDDILTYAKVDTQYAQLT------FTDVQEVVDKALA-NLKQRIE-ESGAEI 627 G L+ I+ I+ +++++ L T Q V+ L +KQ+I E +I Sbjct: 430 GKKLLDQ-INSIIQLSQLESGQTALNCQSFSLHTLAQTVIHSLLGVAIKQQINLELDYQI 488 Query: 628 EVGSMPAVMADQIQLMQVFQNLIANGIKFAGDKSPKI-KIWGDRQEDAWVFAVQDNGIGI 686 VG ADQ +L Q+ L+ N +KF + I +IW ++ + +F V+D GIGI Sbjct: 489 NVGQ-DQFCADQERLDQILTQLLNNALKFTPAEGTVILRIW--KESNQAIFQVEDTGIGI 545 Query: 687 DPQFFERIFVIFQRLHTR--DEYKGTGMGLAICKKIIEGHQGQIWLESNPGEGSTFYFSI 744 + Q +F F+ Y+ G+GLA+ K+++E H G I +ES+PG+G+ F I Sbjct: 546 NEQQLPVLFEAFKVAGDSYTSFYETGGVGLALTKQLVELHGGYIEVESSPGQGTIFTTVI 605 Query: 745 PIGN 748 P N Sbjct: 606 PQQN 609 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 71.2 bits (173), Expect = 1e-14 Identities = 82/294 (27%), Positives = 133/294 (45%), Gaps = 43/294 (14%) Query: 483 RLQSLPWQSVEIQSALALKKAI-VNLILRQAEELAQLARNLERSNADLKK-FAYIASHDL 540 +LQ L +Q E++ A K I N L++ +L + A+ + S A K F SH+L Sbjct: 319 KLQEL-YQQRELERAQREKILIEYNESLQKQVDLVR-AKEIAESEAKAKSTFVANMSHEL 376 Query: 541 QEPLNQVSNYVQLLEMRYSEALDEDAKDFIDFAVTGVSLMQTLIDDILTYAKVDTQYAQL 600 + PLN + + QL+ +R E ++ +G L+ LI++IL ++K++ L Sbjct: 377 RSPLNAIIGFSQLM-LRTKNLPMEQYENAGIIQRSGEYLLN-LINNILDFSKIEAGKTHL 434 Query: 601 TFT--DVQEVVDKALANLKQRIEESGAE---IEVGSMPA-VMADQIQLMQVFQNLIANGI 654 D+ ++D L + G E I +P V D+I+L Q+ NL++N I Sbjct: 435 NRHNFDLYLLLDDLEDMLHLKAANEGIELIFIRDHDLPRYVYGDEIKLRQILLNLLSNAI 494 Query: 655 KFAGD-----------------------KSPKIKIWGDRQEDAWVFAVQDNGIGIDPQFF 691 KF + PK K W D F ++D G GI Sbjct: 495 KFTTEGEVVLTSNFRNAEQQEVINPETSTEPKNKYWLD-------FTIKDTGKGISEVEL 547 Query: 692 ERIFVIFQRLHT-RDEYKGTGMGLAICKKIIEGHQGQIWLESNPGEGSTFYFSI 744 +F F + + R+ +GTG+GLAI ++ I+ G I + S +G+TF FSI Sbjct: 548 SHLFEAFSQTESGRNAQEGTGLGLAITRQFIKLMGGDINVSSVVDQGTTFSFSI 601 >SYNE-PCC-01-002220 slr1212 Length = 844 Score = 57.0 bits (136), Expect = 2e-10 Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 27/148 (18%) Query: 146 RLRQQANLRDFYDVIVEEVRRMTGFDRVMLYRFDENNH---GDVIAEDKRDDMEPYLGLH 202 R+RQ +L ++ +V+E+R+ DRV++++F ++ G+++AE +P + Sbjct: 469 RIRQSLDLPTIFNTVVQEIRQFLEADRVVIFQFSPDSDFSVGNIVAESVLAPFKPIINSA 528 Query: 203 YPESDIPQPARRLFIHNPIRVIPDVYGVAVPLTPAVNPSTNRAVDLTESILRSAYHCHLT 262 E+ + + I+VI D++ +S LR CH+ Sbjct: 529 IEETCFSNNYAQRYQQGRIQVIEDIH---------------------QSHLRQ---CHID 564 Query: 263 YLKNMGVGASLTISLIKDGHLWGLIACH 290 +L + V A+L + LI D LWGL+ H Sbjct: 565 FLARLQVRANLVLPLINDAILWGLLCIH 592 >SYNE-PCC-01-000983 sll1473 Length = 481 Score = 42.7 bits (99), Expect = 4e-06 Identities = 32/162 (19%), Positives = 58/162 (35%), Gaps = 36/162 (22%) Query: 141 NAALNRLRQQANLRDFYDVIVEEVRRMTGFDRVMLYRFDENNHGDVIAEDKRDDMEPYLG 200 N +RQ NL + V EV+ + DRV++YR ++ G I E + LG Sbjct: 47 NQITQHIRQSLNLETVLNTTVAEVKTLLQVDRVLIYRIWQDGTGSAITESVNANYPSILG 106 Query: 201 LHYPESDIPQPARRLFIHNPIRVIPDVYGVAVPLTPAVNPSTNRAVDLTESILRSAYHCH 260 + + P + + +R I D+ + + C Sbjct: 107 RTFSDEVFPVEYHQAYTKGKVRAINDIDQDDIEI------------------------CL 142 Query: 261 LTYLKNMGVGASLTISLIKDG------------HLWGLIACH 290 ++K GV + L + +++ +LWGL+ H Sbjct: 143 ADFVKQFGVKSKLVVPILQHNRASSLDNESEFPYLWGLLITH 184 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.321 0.138 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,571 Number of Sequences: 78 Number of extensions: 3128 Number of successful extensions: 76 Number of sequences better than 1.0e-05: 18 Number of HSP's better than 0.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 21 Number of HSP's gapped (non-prelim): 25 length of query: 748 length of database: 48,235 effective HSP length: 70 effective length of query: 678 effective length of database: 42,775 effective search space: 29001450 effective search space used: 29001450 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 96 (41.6 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-001777 slr0599 (535 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-001777 slr0599 807 0.0 SCER-S28-01-000850 ORFP:YDL101C DUN1, Chr IV from 280306-281847... 52 3e-09 >SYNE-PCC-01-001777 slr0599 Length = 535 Score = 807 bits (2085), Expect = 0.0 Identities = 420/535 (78%), Positives = 420/535 (78%) Query: 1 MVTPLKLLNNRYRIIETLGRGGFGETFLAQDTHMPSARKCVIKHLKPVLENPEIPSWLRE 60 MVTPLKLLNNRYRIIETLGRGGFGETFLAQDTHMPSARKCVIKHLKPVLENPEIPSWLRE Sbjct: 1 MVTPLKLLNNRYRIIETLGRGGFGETFLAQDTHMPSARKCVIKHLKPVLENPEIPSWLRE 60 Query: 61 RFHREAATLEELGENHPQIPQLYAYFSEGEDFYLVQEWIPGLTLTQAHAQKGNFSSTAVE 120 RFHREAATLEELGENHPQIPQLYAYFSEGEDFYLVQEWIPGLTLTQAHAQKGNFSSTAVE Sbjct: 61 RFHREAATLEELGENHPQIPQLYAYFSEGEDFYLVQEWIPGLTLTQAHAQKGNFSSTAVE 120 Query: 121 ELLLGILPVLEFIHQRRIIHRDIKPDNIILREADGKPILIDFGIIKETMGTLVNPDGRSA 180 ELLLGILPVLEFIHQRRIIHRDIKPDNIILREADGKPILIDFGIIKETMGTLVNPDGRSA Sbjct: 121 ELLLGILPVLEFIHQRRIIHRDIKPDNIILREADGKPILIDFGIIKETMGTLVNPDGRSA 180 Query: 181 YSVALGTPGYMASEQAAGRPVFSSDLYSLGLTAIFLLTGKTPQYLTSDSRTGEILWRQGA 240 YSVALGTPGYMASEQAAGRPVFSSDLYSLGLTAIFLLTGKTPQYLTSDSRTGEILWRQGA Sbjct: 181 YSVALGTPGYMASEQAAGRPVFSSDLYSLGLTAIFLLTGKTPQYLTSDSRTGEILWRQGA 240 Query: 241 PQVSPTLAKVIDQAVRYHPRERFNSATAMAQTLQGNFSNVPMTKGDRPGNTVANGKTKSN 300 PQVSPTLAKVIDQAVRYHPRERFNSATAMAQTLQGNFSNVPMTKGDRPGNTVANGKTKSN Sbjct: 241 PQVSPTLAKVIDQAVRYHPRERFNSATAMAQTLQGNFSNVPMTKGDRPGNTVANGKTKSN 300 Query: 301 HQPTAPTLVVGTPYNANDTQATKVYTQEFTGYTETQEGSPLMKWVVMPLVVLLVIGGGMA 360 HQPTAPTLVVGTPYNANDTQATKVYTQEFTGYTETQEGSPLMKWVVMPLVVLLVIGGGMA Sbjct: 301 HQPTAPTLVVGTPYNANDTQATKVYTQEFTGYTETQEGSPLMKWVVMPLVVLLVIGGGMA 360 Query: 361 AGFWVTSQRRNNXXXXXXXXXXXXXXXXXXXXXRPNLFXXXXXXXXXXXXXXXXXXXXXX 420 AGFWVTSQRRNN RPNLF Sbjct: 361 AGFWVTSQRRNNPPPAVEEPTEETPIPLPSLEPRPNLFETPSPIPTPATPSPEPTPSPSP 420 Query: 421 XXXXXXXXXXXXXXXMEPEPSLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480 MEPEPSLD Sbjct: 421 SPETTSSPTEDTITPMEPEPSLDEPAPIPEPKPSPSPTISPQPSPTISIPVTPAPVPKPS 480 Query: 481 XXXXXXXXXXXXXXXXXXXXNTVPVIPPPENPSAETEPNLPAPPVGEKPIDPEQN 535 NTVPVIPPPENPSAETEPNLPAPPVGEKPIDPEQN Sbjct: 481 PSPTPKPTVPPQISPTPQPSNTVPVIPPPENPSAETEPNLPAPPVGEKPIDPEQN 535 >SCER-S28-01-000850 ORFP:YDL101C DUN1, Chr IV from 280306-281847, reverse complement Length = 513 Score = 52.4 bits (124), Expect = 3e-09 Identities = 62/227 (27%), Positives = 93/227 (40%), Gaps = 41/227 (18%) Query: 76 HPQIPQLYAYFSEGEDF-----YLVQEWIPGLTLTQAHAQKGNFSSTAVEELLLGILPVL 130 HP I L F E YLV E I L + +K + L +L L Sbjct: 257 HPNIVNLLDSFVEPISKSQIQKYLVLEKIDDGELFERIVRKTCLRQDESKALFKQLLTGL 316 Query: 131 EFIHQRRIIHRDIKPDNIILR------------------EADGKPILIDFGIIKETMGTL 172 +++H++ IIHRDIKP+NI+L E D + + DFG+ K T Sbjct: 317 KYLHEQNIIHRDIKPENILLNITRRENPSQVQLGPWDEDEIDIQVKIADFGLAKFT---- 372 Query: 173 VNPDGRSAYSVAL-GTPGYMASEQAAGRPVFSS-DLYSLGLTAIFLLTGKTP--QYLTSD 228 G ++ L GTP Y+A E + S DL+S G+ L G P L Sbjct: 373 ----GEMQFTNTLCGTPSYVAPEVLTKKGYTSKVDLWSAGVILYVCLCGFPPFSDQLGPP 428 Query: 229 SRTGEILWRQGA------PQVSPTLAKVIDQAVRYHPRERFNSATAM 269 S +IL + A ++ ++ +I + +P ER+N A+ Sbjct: 429 SLKEQILQAKYAFYSPYWDKIDDSVLHLISNLLVLNPDERYNIDEAL 475 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.316 0.135 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,543 Number of Sequences: 78 Number of extensions: 1741 Number of successful extensions: 9 Number of sequences better than 1.0e-05: 2 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 5 Number of HSP's gapped (non-prelim): 4 length of query: 535 length of database: 48,235 effective HSP length: 67 effective length of query: 468 effective length of database: 43,009 effective search space: 20128212 effective search space used: 20128212 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 95 (41.2 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-002033 slr0947 (234 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-002033 slr0947 459 e-132 SYNE-PCC-01-001461 slr0115 180 3e-48 SYNE-PCC-01-000414 sll0649 177 3e-47 SYNE-PCC-01-001437 slr0081 161 2e-42 SYNE-PCC-01-000242 sll0396 159 6e-42 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 145 1e-37 SYNE-PCC-01-002486 slr1584 133 4e-34 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 126 5e-32 SYNE-PCC-01-000877 sll1330 125 1e-31 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 124 2e-31 SYNE-PCC-01-002672 slr1837 117 3e-29 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 114 2e-28 SYNE-PCC-01-000518 sll0789 114 4e-28 SYNE-PCC-01-002731 slr1909 103 4e-25 SYNE-PCC-01-002086 slr1042 96 1e-22 SYNE-PCC-01-000523 sll0797 94 4e-22 SYNE-PCC-01-001133 sll1673 93 9e-22 SYNE-PCC-01-002489 slr1588 89 2e-20 SYNE-PCC-01-002635 slr1783 87 4e-20 SYNE-PCC-01-001306 sll1905 84 4e-19 SYNE-PCC-01-002618 slr1760 78 3e-17 SYNE-PCC-01-002788 slr1982 75 2e-16 SYNE-PCC-01-000800 sll1228 67 5e-14 SYNE-PCC-01-001132 sll1672 62 2e-12 SYNE-PCC-01-002617 slr1759 59 1e-11 SYNE-PCC-01-002879 slr2104 59 2e-11 SYNE-PCC-01-002221 slr1213 58 3e-11 SYNE-PCC-01-001575 slr0312 55 2e-10 SYNE-PCC-01-001075 sll1592 53 8e-10 SYNE-PCC-01-002873 slr2098 53 1e-09 HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator pr... 51 3e-09 SYNE-PCC-01-001160 sll1708 49 1e-08 SYNE-PCC-01-000608 sll0921 46 1e-07 SYNE-PCC-01-001517 slr0222 43 8e-07 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 459 bits (1180), Expect = e-132 Identities = 234/234 (100%), Positives = 234/234 (100%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ Sbjct: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 Query: 61 ELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKNGMP 120 ELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKNGMP Sbjct: 61 ELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKNGMP 120 Query: 121 GIPSSGVLQIATIRIDTNKRQVYKGDERIRLTGMEFSLLELLVSRSGEPFSRSEILQEVW 180 GIPSSGVLQIATIRIDTNKRQVYKGDERIRLTGMEFSLLELLVSRSGEPFSRSEILQEVW Sbjct: 121 GIPSSGVLQIATIRIDTNKRQVYKGDERIRLTGMEFSLLELLVSRSGEPFSRSEILQEVW 180 Query: 181 GYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGYLFQRILEPGEEP 234 GYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGYLFQRILEPGEEP Sbjct: 181 GYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGYLFQRILEPGEEP 234 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 180 bits (457), Expect = 3e-48 Identities = 95/234 (40%), Positives = 143/234 (61%), Gaps = 6/234 (2%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 ++DD+ +I ++ L M GY+V A DG + A + PDL++LD+M+PK+DG+ VCQ Sbjct: 6 IIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFTVCQ 65 Query: 61 ELRKE---SDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKN 117 LR++ +DIP++MLTALG + D+I G + GADDY+ KPF +E+ AR+R++LRR D+ Sbjct: 66 RLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLRRTDRI 125 Query: 118 GMPGIPSSGVLQIATIRIDTNKRQVYKGDERIRLTGMEFSLLELLVSRSGEPFSRSEILQ 177 S +L + + + + + I+LT +EF LL L+ R G+ S S+IL+ Sbjct: 126 PQ-AAKHSEILNQGPLTLVPERFEAIWFGKSIKLTHLEFELLHCLLQRHGQTVSPSDILR 184 Query: 178 EVWGYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGYLFQRILEPG 231 EVWGY P+ ++T + VHI LR KLE +P P I T G GY + E G Sbjct: 185 EVWGYEPDDDIET--IRVHIRHLRTKLEPNPRRPRFIKTVYGAGYCLELSTEEG 236 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 177 bits (449), Expect = 3e-47 Identities = 97/232 (41%), Positives = 144/232 (62%), Gaps = 12/232 (5%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 +V+D+ I +++ L + + DGE + F E PDL+VLD+M+PKLDG VC Sbjct: 16 IVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLEVCT 75 Query: 61 ELRKE---SDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKN 117 +R++ D I+MLTA G+ DRI GL GADDY+VKPFSP+EL AR+R++LRR + Sbjct: 76 RIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRALLRRQLRQ 135 Query: 118 GMPGIPSSGVLQIATIRIDTNKRQV--YKGD--ERIRLTGMEFSLLELLVSRSGEPFSRS 173 G P + + ++D ++ Q Y+GD E + LTG+EF+LL +S G ++R+ Sbjct: 136 GQ---PVGQIYRTNHFQVDLDQHQASRYQGDRQEELELTGLEFNLLATFMSYPGRVWNRT 192 Query: 174 EILQEVWGYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGYLFQ 225 ++++++WG + D RVVD HI RLR K+E DP+NP I T G GY F+ Sbjct: 193 QLIEKLWG--NDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGYKFE 242 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 161 bits (408), Expect = 2e-42 Identities = 93/232 (40%), Positives = 139/232 (59%), Gaps = 13/232 (5%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHE--SDP-----DLVVLDVMMPKL 53 +V+DE SIR + L GYEV DG +A+A E DP DL++LD+M+P++ Sbjct: 35 VVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIMLPQV 94 Query: 54 DGYGVCQELRKESD-IPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLR 112 +G VC+ LR D PI++++A G +++TGLE+GADDY+ KPFS KEL AR R+++R Sbjct: 95 NGLDVCRSLRFGGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARCRAMIR 154 Query: 113 RVDKNGMPGIPSSGVLQIATIRIDTNKRQVYKGDERIRLTGMEFSLLELLVSRSGEPFSR 172 R G+ G + + + + + +V E + L EF LLEL +S +SR Sbjct: 155 R---QGLAGNNIAPFRKFRDLVLYPQECRVLMRGEEVSLAPKEFRLLELFMSYPRRVWSR 211 Query: 173 SEILQEVWGYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGYLF 224 ++++ +WG + D++ VDVHI LR KLE+DPS PE ++T RG GY F Sbjct: 212 EQLIEHIWGI--DFMGDSKTVDVHIRWLREKLEQDPSQPEYLVTVRGFGYRF 261 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 159 bits (403), Expect = 6e-42 Identities = 90/226 (39%), Positives = 134/226 (59%), Gaps = 10/226 (4%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 +V++E + R +E L GY+V A DG + E PDL++++ +P + G +C+ Sbjct: 7 VVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLELCR 66 Query: 61 ELRKE-SDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKNGM 119 LR+ S IPII++TA DV +R+ GL+ GADDY+VKPF+ E ARIR LRR Sbjct: 67 RLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRRTHTT-- 124 Query: 120 PGIPSSGVLQIATIRIDTNKRQVYKGDERIRLTGMEFSLLELLVSRSGEPFSRSEILQEV 179 S VLQ A +R + + R++ +GD I LT EF LL+ L+S + + +R +IL+ V Sbjct: 125 ----SDEVLQFADLRFNRSTREIQRGDRLIDLTAKEFELLDYLLSHARQVLTREQILERV 180 Query: 180 WGYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGYLFQ 225 WGY + D+ +++V+I LR KLE P LI T RG GY+ + Sbjct: 181 WGY--DFMGDSNIIEVYIRYLRLKLEA-AGEPRLIQTVRGVGYVLR 223 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 145 bits (366), Expect = 1e-37 Identities = 91/222 (40%), Positives = 131/222 (59%), Gaps = 4/222 (1%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 +VDD+ + +L T L + G++V TA +G EA+ +ES LV+LDVMMPKL+G + Sbjct: 6 LVDDDIELTELLSTLLELEGFDVETANNGLEALQKLNESYK-LVLLDVMMPKLNGIETLK 64 Query: 61 ELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKNGMP 120 E+RK S++P++MLTA G+ DR+ GLELGADD + KPF+ +EL ARI+++LRR + Sbjct: 65 EIRKVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRR-SASPSN 123 Query: 121 GIPSSGVLQIATIRIDTNKRQVYKGDERIRLTGMEFSLLELLVSRSGEPFSRSEILQEVW 180 I + +L I + + +E + LT EF +L LL+ G SR E+ EV Sbjct: 124 NISNVEILSFDGITLHFSHGIATYNEENLNLTDYEFKILCLLLKSKGNVVSREELSLEVM 183 Query: 181 GYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGY 222 P D R +D+HIS LR KL + + P T RG GY Sbjct: 184 -EKPLTPFD-RSLDMHISNLRRKLPKRKNKPSWFKTLRGKGY 223 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 133 bits (335), Expect = 4e-34 Identities = 88/230 (38%), Positives = 123/230 (53%), Gaps = 9/230 (3%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 +V+D+ + L LS Y V A D A + DLV+LDVM+P+LDG +CQ Sbjct: 5 LVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGITLCQ 64 Query: 61 ELRKESDI-PIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKNGM 119 + R S + PI+M+TA + D+ITGL+ GADDYVVKP EL AR+R++LRR Sbjct: 65 KWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRRGCATCQ 124 Query: 120 PGIPSSGVLQIATIRIDTNKRQVYKGDERIRLTGMEFSLLELLVSRSGEPFSRSEILQEV 179 P VL+ IR+D + +V +E + LT E+S+LELL+ SRS I+ + Sbjct: 125 P------VLEWGPIRLDPSTYEVSYDNEVLSLTRKEYSILELLLRNGRRVLSRSMIIDSI 178 Query: 180 WGYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGYLFQRILE 229 W DT V VH+ LR KL+ + + I T G GY + E Sbjct: 179 WKLESPPEEDT--VKVHVRSLRQKLKSAGLSADAIETVHGIGYRLANLTE 226 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 126 bits (317), Expect = 5e-32 Identities = 86/231 (37%), Positives = 123/231 (53%), Gaps = 13/231 (5%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 +V+DE +IR ++ LS Y+V+ A+D + AI E+ P L++LD M+P G Q Sbjct: 7 IVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKEN-PKLILLDWMLPGRSGIQFIQ 65 Query: 61 ELRKESD---IPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKN 117 ++K+ IPIIMLTA D I L GADDY+ KPFSP+ L ARI +V RR+ + Sbjct: 66 YIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWRRIYEQ 125 Query: 118 GMPGIPSSGVLQIATIRIDTNKRQVYKGDERIRLTGMEFSLLELLVSRSGEPFSRSEILQ 177 S +QI + ID N ++V+ + I L+ EF LL + + +SR ++L Sbjct: 126 ------QSQFIQIDELSIDENAQRVFFQQQEINLSSTEFKLLHFFMRHPEKVYSREQLLN 179 Query: 178 EVWGYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGYLFQRIL 228 +W E V+ R VD +I RLR L I T RG+GY F L Sbjct: 180 RIWHNDLE--VEYRTVDSYIRRLRRNLAPFQCE-HYIQTVRGSGYRFSSYL 227 >SYNE-PCC-01-000877 sll1330 Length = 250 Score = 125 bits (314), Expect = 1e-31 Identities = 79/224 (35%), Positives = 116/224 (51%), Gaps = 8/224 (3%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 +V+ +R +L L GY V + +A F+ P L V+D + DG +C+ Sbjct: 8 VVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGDGIELCR 67 Query: 61 ELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKNGMP 120 L ++ I +L+A D + GL+ GADDY+ KPF +E ARI ++RRV P Sbjct: 68 WLYQQHQSMIFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRRVRTVAAP 127 Query: 121 GIPSSGVLQIATIRIDTNKRQVYKGDERIRLTGMEFSLLELLVSRSGEPFSRSEILQEVW 180 + GVL+I ++ +R Y+G+ + LT EFSLL +L G SR+E+L+ W Sbjct: 128 LLLDYGVLKIDLVQ----RRVEYQGN-FVDLTPQEFSLLYVLTQAEGSALSRTELLRRAW 182 Query: 181 GYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGYLF 224 PE + R +D H+ LR K+E DP P LI T R GY F Sbjct: 183 ---PEAIDNPRTIDTHVLSLRKKIETDPRQPSLIQTVRNVGYRF 223 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 124 bits (312), Expect = 2e-31 Identities = 76/228 (33%), Positives = 128/228 (56%), Gaps = 14/228 (6%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 +++D+ I L+ L+ +G+ V DG+ +A + D VVLD+ +PKLDG V Q Sbjct: 5 LIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLEVLQ 64 Query: 61 ELRKE-SDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKNGM 119 + R D+P+++LTA + +R+ GL+ GADDY+ KPF+ E+ AR+++++RR + G Sbjct: 65 QWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRR--RYGY 122 Query: 120 PGIPSSGVLQIATIRIDTNKRQVYKGDERIRLTGMEFSLLELLVSRSGEPFSRSEILQEV 179 V++ A +++D N+R V+ ++ I LT E+ LLEL + SRS I +++ Sbjct: 123 ----HHSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSRSSIEEKL 178 Query: 180 WGYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGYLFQRI 227 + E + + +DVHI LR KL + I T G GY ++ Sbjct: 179 SSWDEE--ISSGALDVHIYNLRQKL-----GKQFIRTVHGVGYALGQV 219 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 117 bits (294), Expect = 3e-29 Identities = 73/231 (31%), Positives = 121/231 (52%), Gaps = 10/231 (4%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 +VDDE ++ L L G+ + A G+ +A DL++LD M+P++ G +C+ Sbjct: 6 LVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGLEICR 65 Query: 61 ELR-KESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDK--- 116 ++R P++ LTA + DR+ GL+ G DDY++KPF +EL AR+R++LRR Sbjct: 66 QIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFELRELLARVRALLRRQSHGET 125 Query: 117 -NGMPGIPSSGVLQIATIRIDTNKRQVYKGDERIRLTGMEFSLLELLVSRSGEPFSRSEI 175 G + +L + + +D + Y +RI L+ E +LL L + G+ S EI Sbjct: 126 ITETLGAVKNNLLSVNNVSLDVANQVAYCQGQRIALSEKEVALLTLFLQAPGQILSHEEI 185 Query: 176 LQEVW-GYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGYLFQ 225 +W G +P + V+ + LR K+E+ P+ P LI + G GY F+ Sbjct: 186 YSHLWPGESPP---SSNVLAALVRLLRRKIEQ-PNAPRLINSVYGKGYCFE 232 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 114 bits (286), Expect = 2e-28 Identities = 74/230 (32%), Positives = 117/230 (50%), Gaps = 12/230 (5%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 +V+DE R L+ GY+V A +G E + +LVV+D+ +P +G + + Sbjct: 8 VVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGLLLAR 67 Query: 61 ELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKNGMP 120 ELR+E +P+I LT + D+I GLE+GADDY+ KPF+P+EL R R++L R MP Sbjct: 68 ELREELSLPLIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHR----AMP 123 Query: 121 GIPSSGVL-----QIATIRIDTNKRQVYKGD-ERIRLTGMEFSLLELLVSRSGEPFSRSE 174 + ++D N + + + +L EF + G+ +R E Sbjct: 124 HQEKENTFGREFYRFNGWKLDLNSHSLITPEGQEFKLPRSEFRAMLHFCENPGKLQTREE 183 Query: 175 ILQEVWGYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGYLF 224 +L+++ G E R VDV I R+R E+ P+ P +I+T G GY F Sbjct: 184 LLKKMTG--RELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGYRF 231 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 114 bits (284), Expect = 4e-28 Identities = 84/229 (36%), Positives = 118/229 (51%), Gaps = 13/229 (5%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHES--DPDLVVLDVMMPKLDGYGV 58 +V+DE + LE L Y V DG A + + + L + D M+P L G + Sbjct: 5 LVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSGLEL 64 Query: 59 CQELR-KESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKN 117 CQ+LR + S +PI+MLTA +ADR+ GL+ GADDY++KPF EL AR+RS+ RR Sbjct: 65 CQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAELLARLRSLQRR---- 120 Query: 118 GMPGIPSSGVLQIATIRIDTNKRQVYKGDE-RIRLTGMEFSLLELLVSRSGEPFSRSEIL 176 P + LQ+ +D V ++ RI LT EF LLE + + S +I Sbjct: 121 -SPELQPQ-QLQVGQWWLDYGTFAVVTPEQARITLTAKEFQLLEYFMKHPQQILSSEQIK 178 Query: 177 QEVWGYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGYLFQ 225 ++W + E + VV + LR KLEE S+ LI T G GY FQ Sbjct: 179 NQLWALSAES--TSNVVAAQVRLLRRKLEE-YSHGNLIETVYGLGYRFQ 224 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 103 bits (258), Expect = 4e-25 Identities = 64/206 (31%), Positives = 111/206 (53%), Gaps = 26/206 (12%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 +VDD+ ++ +++ L GY+V TA +G EA+ + PD++V D+MMP++DGY + Sbjct: 12 LVDDDPNLLLLVKDYLEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIE 71 Query: 61 ELRKESD---IPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKN 117 ++R+ D IP++ L+A G +R+ GL +GAD Y+ KPF P+EL A+++S LR+ D+ Sbjct: 72 QVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQADR- 130 Query: 118 GMPGIPSSGVLQIATIRIDTNKRQVYKGDERIRLTGMEFSLLELLVSRSGEPFSRSEILQ 177 +LQ ++ N R D + LT E +++L+ + + EI Sbjct: 131 ---------LLQHNNHPLEDNARVQVARD--VELTPTETKVIQLV----AQGLANREIAD 175 Query: 178 EVWGYTPERHVDTRVVDVHISRLRAK 203 + V R V+ H+S + K Sbjct: 176 HL-------KVSQRTVESHVSNMLNK 194 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 95.9 bits (237), Expect = 1e-22 Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 3/115 (2%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 +V+D +S R ++ L G++V A DG EA+ PDLVVLD++MP+++GY VC+ Sbjct: 32 LVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEVCR 91 Query: 61 ELR---KESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLR 112 ++ K ++P+IM ++ G+ DR G+ GAD Y+ KPF P EL I+ +LR Sbjct: 92 RIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLLR 146 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 94.0 bits (232), Expect = 4e-22 Identities = 75/236 (31%), Positives = 118/236 (50%), Gaps = 22/236 (9%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHE--SDPDLVVLDVMMPKLDGYGV 58 +V+DE + ++ L Y V DG +A ++ L ++D ++P L G + Sbjct: 5 LVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSGLEL 64 Query: 59 CQELRKESD-IPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKN 117 CQ+LR + + +P++MLTALG+ +R+ GL+ GADDY+ KPF EL AR+R++ RR Sbjct: 65 CQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAELLARLRALQRR-SPQ 123 Query: 118 GMPGI---------PSSGVLQIATIRIDTNKRQVYKGDERIRLTGMEFSLLELLVSRSGE 168 P I PS+ +L + TI N + + I LT EF + + L+ Sbjct: 124 FQPQILTLGNFSLDPSNNLLSV-TISEPLNLER-----QEIALTVREFQIFQYLMQNPER 177 Query: 169 PFSRSEILQEVWGYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGYLF 224 S S+I Q++W E + VV + +R KL + + P I T G GY F Sbjct: 178 IISGSKIRQQLWDLDEEPM--SNVVAAQMRLIRRKLAQQ-NCPCPIKTVPGQGYRF 230 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 92.8 bits (229), Expect = 9e-22 Identities = 46/110 (41%), Positives = 68/110 (61%), Gaps = 3/110 (2%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 +VDD + ++L L +GY V + G+ A+ T PDL++LD+ MP +DGY VC+ Sbjct: 13 LVDDLPNNLQLLSDLLINLGYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQVCE 72 Query: 61 ELRKE---SDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARI 107 ++KE DIPII ++ALGD D++ E G DY+ KPF +E+ ARI Sbjct: 73 MIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQIEEVVARI 122 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 88.6 bits (218), Expect = 2e-20 Identities = 47/121 (38%), Positives = 76/121 (62%), Gaps = 5/121 (4%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESD--PDLVVLDVMMPKLDGYGV 58 +V+DEA IR ++ LS+ Y+++ A +G A+ + + PDL++ DVMMP++DG+G+ Sbjct: 6 VVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGHGL 65 Query: 59 CQELRKESD---IPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVD 115 L+K + IP I LTALG + D G+ GADDY++KPF ++L + S L++ Sbjct: 66 ITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSRLQKQA 125 Query: 116 K 116 K Sbjct: 126 K 126 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 87.4 bits (215), Expect = 4e-20 Identities = 50/134 (37%), Positives = 78/134 (58%), Gaps = 4/134 (2%) Query: 1 MVDDEASIRRILETRLSMIG-YEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVC 59 +VDDE +R ++ L G ++V AA+ EA P LV+ D+MMP++DGY Sbjct: 60 LVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGYQFL 119 Query: 60 QELRKES---DIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDK 116 Q+LR+++ +P++ LTA G DRI G + G D ++ KPF P ELEA +R++L R Sbjct: 120 QKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLARQQA 179 Query: 117 NGMPGIPSSGVLQI 130 + G S+ + +I Sbjct: 180 SSDAGSESAKLQEI 193 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 84.0 bits (206), Expect = 4e-19 Identities = 45/114 (39%), Positives = 64/114 (56%), Gaps = 3/114 (2%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 +VDD ++ L GY G EA+ ++ PDL++LD+MMP +DG VC Sbjct: 22 VVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQPDLILLDLMMPGMDGLEVCD 81 Query: 61 ELRKE---SDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVL 111 L+++ DIP+I LTA + D + GA DYV KPFSP EL AR+++ L Sbjct: 82 RLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVKTHL 135 Score = 57.4 bits (137), Expect = 4e-11 Identities = 34/112 (30%), Positives = 61/112 (54%), Gaps = 4/112 (3%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 + +D +++ + L +GY V +G+EA++ + D D+V++DV MP++DG + Sbjct: 744 LAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTATE 803 Query: 61 ELRK---ESDIP-IIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIR 108 +R+ S+ P II +TA DR L G +DYV KP + L+ ++ Sbjct: 804 HIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKPIRLEALQQALQ 855 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 77.8 bits (190), Expect = 3e-17 Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 3/114 (2%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 +VDD+ +R L L G+ V A +GEEA+ F E P++V+LD +MP +DG+ CQ Sbjct: 16 VVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGFACCQ 75 Query: 61 ELRKESDIP---IIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVL 111 L K P ++M+T L D A E GA DYV KP L R++ +L Sbjct: 76 ALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLL 129 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 74.7 bits (182), Expect = 2e-16 Identities = 40/114 (35%), Positives = 63/114 (55%), Gaps = 3/114 (2%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 +V+D R +L RL GYEVV A DGE+A+ P L+++D+ +P +DG+ + Sbjct: 9 LVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGWTATK 68 Query: 61 ELRKESD---IPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVL 111 +++ D IPII LTA +DR + G DDY KP K L ++ +++ Sbjct: 69 QIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEALI 122 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 67.0 bits (162), Expect = 5e-14 Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 6/148 (4%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 +VDD R +L L+ +G+ V A +GE AIA + P ++++D+ MP LDG Q Sbjct: 422 VVDDRPESRLLLRQLLTSLGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRSTTQ 481 Query: 61 ELR---KESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLR-RVDK 116 +++ + II LTA +R L G DD++ KPF P+EL A + L + Sbjct: 482 KIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIALLAKHLAVALPS 541 Query: 117 NGMPGIPSSGVLQIATIRIDTNKRQVYK 144 G P P+S + I + Q+ K Sbjct: 542 QGQP--PASPLRPFPVITAPSLSEQLAK 567 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 62.0 bits (149), Expect = 2e-12 Identities = 33/101 (32%), Positives = 60/101 (59%), Gaps = 3/101 (2%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 +VDD++ R++L L+ G+E+ A++G+EAIA + +P L+ +D+ MP +DGY + Sbjct: 634 VVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYEATK 693 Query: 61 ELR---KESDIPIIMLTALGDVADRITGLELGADDYVVKPF 98 ++ K + ++ LTA ++ L G DD++ KPF Sbjct: 694 YIKGQVKGNATAVVALTASVLEEEKAIVLSAGCDDFLRKPF 734 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 59.3 bits (142), Expect = 1e-11 Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 4/107 (3%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 + +D +++ L+ +GY V A +G+E I + DLV++D+ MP +DG C+ Sbjct: 1194 LAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGITACR 1253 Query: 61 ELRK----ESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKEL 103 +R+ E I+ +TA DR L+ G D Y+ KP S +L Sbjct: 1254 HIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQL 1300 Score = 45.4 bits (106), Expect = 2e-07 Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 13/99 (13%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHES-DPDLVVLDVMMPKLDGYGVC 59 +VDD + RRIL+ + G GE A+ F D D +LD+ MP +DG + Sbjct: 1038 IVDDNETNRRILQDQCQAWGLVCHCFTSGESALDWFARCPDLDAAILDLQMPNMDGITLA 1097 Query: 60 QELR---KESDIPIIMLTALGDVADRITGLELGADDYVV 95 LR + D+PII+L+ +GL GAD+ V Sbjct: 1098 HHLRQFAQGKDLPIILLS---------SGLVAGADELSV 1127 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 58.5 bits (140), Expect = 2e-11 Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 3/103 (2%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 +V+D R L+ G V A +G+EA+ + D +++D+ MP L+GY + Sbjct: 722 LVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYDATR 781 Query: 61 ELRKES---DIPIIMLTALGDVADRITGLELGADDYVVKPFSP 100 +R++ ++PII +TA D+ L+ G +D++ KP P Sbjct: 782 AIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKP 824 >SYNE-PCC-01-002221 slr1213 Length = 241 Score = 57.8 bits (138), Expect = 3e-11 Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 2/105 (1%) Query: 1 MVDDEASIRRILETRLSMIGYEV-VTAADGEEAIATFHESDPDLVVLDVMMP-KLDGYGV 58 +V+DE + + + L GYE+ V A+DG A+ E PDLV+LD+ + ++DG V Sbjct: 7 IVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEIDGIEV 66 Query: 59 CQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKEL 103 + ++ IPI+ LTA D + YV+KPF ++L Sbjct: 67 AERIKSLYSIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQL 111 >SYNE-PCC-01-001575 slr0312 Length = 209 Score = 55.5 bits (132), Expect = 2e-10 Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 9/118 (7%) Query: 1 MVDDEASIRRILETRLSMIG--YEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGY-- 56 + DD A R+ L T ++ + A +GE+AIA F E PD+ ++D+ MP+++G Sbjct: 11 IADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPEVEGVAA 70 Query: 57 --GVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLR 112 +C ++ II+LT D GL+ GA Y++K P EL IR+V R Sbjct: 71 ISAICAIVKFAR---IIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHR 125 >SYNE-PCC-01-001075 sll1592 Length = 226 Score = 53.1 bits (126), Expect = 8e-10 Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 3/113 (2%) Query: 1 MVDDEASIRRILETRLSMI-GYEVV-TAADGEEAIATFHESDPDLVVLDVMMPKLDGYGV 58 +V+D+ R L TRLS G +V A DGE AIA ++ D+V+LDV +P + G Sbjct: 12 LVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPGIGGIEA 71 Query: 59 CQELRK-ESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSV 110 C +++K +P+++LT+ A +E A Y VK + + L IRSV Sbjct: 72 CHQIKKIHPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLAIRSV 124 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 52.8 bits (125), Expect = 1e-09 Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 3/106 (2%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 +V+D + + L +G+ V AA+G A+ + + LV++D+ MP++DG Sbjct: 929 LVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIEATI 988 Query: 61 ELRKE---SDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKEL 103 +R+ + +PI+ +TA DR L+ G +D++ KP P+EL Sbjct: 989 AIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEEL 1034 Score = 50.4 bits (119), Expect = 5e-09 Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 8/119 (6%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPD-----LVVLDVMMPKLDG 55 +VDD R +++ L + + V T G EA+ E+D + +V +D MP +DG Sbjct: 775 VVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPNMDG 834 Query: 56 YGVCQELRK---ESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVL 111 V + L+ I ++TA G + LG DD +VKP SP L + VL Sbjct: 835 LEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISPSVLFDSLARVL 893 >HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator protein (narP) Length = 208 Score = 51.2 bits (121), Expect = 3e-09 Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 3/113 (2%) Query: 1 MVDDEASIRRILETRLSMI-GYEVVT-AADGEEAIATFHESDPDLVVLDVMMPKLDGYGV 58 ++DD +RR ++ + + +EVV + G E I+ ++ PD+++LD+ M L G Sbjct: 9 LIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLSGLDT 68 Query: 59 CQELRKES-DIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSV 110 + LR E D I++LT D T ++ GAD Y++K P L +I+ + Sbjct: 69 LKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRI 121 >SYNE-PCC-01-001160 sll1708 Length = 226 Score = 49.3 bits (116), Expect = 1e-08 Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 24/222 (10%) Query: 1 MVDDEASIRRILETRLSMIG-YEVVTAAD-GEEAIATFHESDPDLVVLDVMMPKLDGYGV 58 +V+D+ ++ LE L +E++ D G A+ +PDL+V+D+ +P LDG Sbjct: 21 IVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPGLDGIEA 80 Query: 59 CQELRKES-DIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKN 117 +++++ S I I++LT+ + I L GAD Y VK + + L I + ++ Sbjct: 81 TKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIAAA-----QD 135 Query: 118 GMPGIPSSGVLQIATIRIDTNKRQVYKGDERI-RLTGMEFSLLELLVSRSGEPFSRSEIL 176 G + QIA + ++ K V +G + L+ E +L+L+V E S EI Sbjct: 136 GATYLDP----QIARVVVENLKPPVPEGQADVSSLSEREIDVLKLIV----EGKSNQEIA 187 Query: 177 QEVWGYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTAR 218 Q + ++ T + H+ + KL D ++ R Sbjct: 188 QTL-------YLSTNTIKTHVRGIMNKLSVDDRVQAAVIALR 222 >SYNE-PCC-01-000608 sll0921 Length = 222 Score = 45.8 bits (107), Expect = 1e-07 Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 5/101 (4%) Query: 1 MVDDEASIRRILETRLSMI-GYEVV-TAADGEEAIATFHESDPDLVVLDVMMPKLDGYGV 58 +++DE IR+ L+ L+M +E V AA+G + ++ PD+V++D+ +P ++G V Sbjct: 8 LIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNGIDV 67 Query: 59 CQELRK---ESDIPIIMLTALGDVADRITGLELGADDYVVK 96 Q+L+K +++LT + GAD Y +K Sbjct: 68 TQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMK 108 >SYNE-PCC-01-001517 slr0222 Length = 1178 Score = 43.1 bits (100), Expect = 8e-07 Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 4/116 (3%) Query: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 +VDD+ L L + E++TA G+EAIAT ++ L++L M +LDG + Sbjct: 11 LVDDQRENLVALSRALDSLPVEIITANSGQEAIATAATTEFALMILAQEMSELDGLNTAK 70 Query: 61 ELRK---ESDIPIIMLTALGDVADRITGLE-LGADDYVVKPFSPKELEARIRSVLR 112 LR PII L + + + LG D++ +P + L+ + + L+ Sbjct: 71 ILRSFPLAEQTPIIFLARQEIITKAMAEINILGLVDFLAQPPNQNFLQVKAKLYLQ 126 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.318 0.139 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,410 Number of Sequences: 78 Number of extensions: 1007 Number of successful extensions: 95 Number of sequences better than 1.0e-05: 34 Number of HSP's better than 0.0 without gapping: 25 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 12 Number of HSP's gapped (non-prelim): 38 length of query: 234 length of database: 48,235 effective HSP length: 60 effective length of query: 174 effective length of database: 43,555 effective search space: 7578570 effective search space used: 7578570 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 91 (39.7 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-002086 slr1042 (147 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-002086 slr1042 300 1e-84 SYNE-PCC-01-000414 sll0649 100 4e-24 SYNE-PCC-01-001306 sll1905 97 2e-23 SYNE-PCC-01-002033 slr0947 96 5e-23 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 96 5e-23 SYNE-PCC-01-002731 slr1909 96 7e-23 SYNE-PCC-01-002635 slr1783 91 2e-21 SYNE-PCC-01-001461 slr0115 91 2e-21 SYNE-PCC-01-001437 slr0081 90 4e-21 SYNE-PCC-01-001133 sll1673 86 4e-20 SYNE-PCC-01-000242 sll0396 79 7e-18 SYNE-PCC-01-002873 slr2098 74 2e-16 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 73 5e-16 SYNE-PCC-01-002489 slr1588 72 6e-16 SYNE-PCC-01-002788 slr1982 71 1e-15 SYNE-PCC-01-002879 slr2104 69 7e-15 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 69 7e-15 SYNE-PCC-01-002672 slr1837 68 2e-14 SYNE-PCC-01-002486 slr1584 67 3e-14 SYNE-PCC-01-002221 slr1213 67 4e-14 SYNE-PCC-01-000523 sll0797 65 1e-13 SYNE-PCC-01-001132 sll1672 61 1e-12 SYNE-PCC-01-000800 sll1228 61 2e-12 SYNE-PCC-01-002618 slr1760 60 3e-12 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 60 4e-12 SYNE-PCC-01-002617 slr1759 57 4e-11 SYNE-PCC-01-000518 sll0789 55 1e-10 SYNE-PCC-01-000877 sll1330 51 2e-09 SYNE-PCC-01-000608 sll0921 47 3e-08 SYNE-PCC-01-001575 slr0312 45 1e-07 SYNE-PCC-01-002778 slr1969 43 5e-07 HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator pr... 43 5e-07 SYNE-PCC-01-001160 sll1708 39 8e-06 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 300 bits (769), Expect = 1e-84 Identities = 147/147 (100%), Positives = 147/147 (100%) Query: 1 MMENKPGRIRQFASDPGLQCQAERTFMNAVLLVEDSSSQREMISGILKDHGWQVTIACDG 60 MMENKPGRIRQFASDPGLQCQAERTFMNAVLLVEDSSSQREMISGILKDHGWQVTIACDG Sbjct: 1 MMENKPGRIRQFASDPGLQCQAERTFMNAVLLVEDSSSQREMISGILKDHGWQVTIACDG 60 Query: 61 VEALEKLQNFSPDLVVLDIVMPRMNGYEVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGM 120 VEALEKLQNFSPDLVVLDIVMPRMNGYEVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGM Sbjct: 61 VEALEKLQNFSPDLVVLDIVMPRMNGYEVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGM 120 Query: 121 RQGADAYIAKPFQPMELVGTIKQLLRN 147 RQGADAYIAKPFQPMELVGTIKQLLRN Sbjct: 121 RQGADAYIAKPFQPMELVGTIKQLLRN 147 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 99.8 bits (247), Expect = 4e-24 Identities = 48/120 (40%), Positives = 73/120 (60%) Query: 27 MNAVLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNG 86 M +L+VED ++I L+ + + DG L Q PDL+VLD+++P+++G Sbjct: 11 MPNILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDG 70 Query: 87 YEVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLLR 146 EVC RI+ P +K+ ++M ++KGEE DR G+ GAD Y+ KPF P ELV ++ LLR Sbjct: 71 LEVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRALLR 130 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 97.4 bits (241), Expect = 2e-23 Identities = 44/113 (38%), Positives = 71/113 (62%) Query: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 +L+V+D +IS +L+ G+ T G EAL+++ PDL++LD++MP M+G EV Sbjct: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQPDLILLDLMMPGMDGLEV 79 Query: 90 CRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIK 142 C R+K DP+T+++PVI ++ E+ D +GA Y+ KPF P EL+ +K Sbjct: 80 CDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVK 132 Score = 51.2 bits (121), Expect = 2e-09 Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 1/105 (0%) Query: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 +LL ED+ +++ +LK G+ V + +G EAL L D+V++D+ MP M+G Sbjct: 742 ILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTA 801 Query: 90 CRRI-KSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQ 133 I +S +++ +I ++ E DR + G + Y++KP + Sbjct: 802 TEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKPIR 846 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 95.9 bits (237), Expect = 5e-23 Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 3/115 (2%) Query: 32 LVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEVCR 91 +V+D +S R ++ L G++V A DG EA+ PDLVVLD++MP+++GY VC+ Sbjct: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 Query: 92 RIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLLR 146 ++ K ++P+IM ++ G+ DR G+ GAD Y+ KPF P EL I+ +LR Sbjct: 61 ELR---KESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLR 112 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 95.9 bits (237), Expect = 5e-23 Identities = 52/120 (43%), Positives = 79/120 (65%), Gaps = 4/120 (3%) Query: 27 MNAVLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNG 86 M+ +LLV+D E++S +L+ G+ V A +G+EAL+KL N S LV+LD++MP++NG Sbjct: 1 MSKLLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKL-NESYKLVLLDVMMPKLNG 59 Query: 87 YEVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLLR 146 E + I+ K NVPV+M +++GE+ DR G+ GAD + KPF EL+ IK +LR Sbjct: 60 IETLKEIR---KVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILR 116 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 95.5 bits (236), Expect = 7e-23 Identities = 46/117 (39%), Positives = 73/117 (62%) Query: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 +LLV+D + ++ L+ G+QVT A +G EAL+ L PD++V DI+MP M+GY Sbjct: 10 LLLVDDDPNLLLLVKDYLEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAF 69 Query: 90 CRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLLR 146 +++ +P +PV+ S+KG+ +R G+ GAD Y+AKPF+P EL ++ LR Sbjct: 70 IEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLR 126 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 90.5 bits (223), Expect = 2e-21 Identities = 42/118 (35%), Positives = 77/118 (65%), Gaps = 1/118 (0%) Query: 29 AVLLVEDSSSQREMISGILKDHG-WQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGY 87 ++LLV+D RE + L+D G ++V +A + EA + LQ+ P LV+ DI+MP+++GY Sbjct: 57 SLLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGY 116 Query: 88 EVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLL 145 + ++++ D + +++PV+ +++G DR G + G DA+++KPF P EL ++ LL Sbjct: 117 QFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLL 174 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 90.5 bits (223), Expect = 2e-21 Identities = 39/120 (32%), Positives = 76/120 (63%) Query: 27 MNAVLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNG 86 M +L+++D + +++S L+ G+ V A DG++ PDL++LD+++P+++G Sbjct: 1 MPRILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDG 60 Query: 87 YEVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLLR 146 + VC+R++ D +T ++PV+M ++ G+ D+ G GAD Y+ KPF E++ ++ LLR Sbjct: 61 FTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLR 120 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 89.7 bits (221), Expect = 4e-21 Identities = 49/124 (39%), Positives = 75/124 (60%), Gaps = 9/124 (7%) Query: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPD-------LVVLDIVMP 82 +L+VED S RE I L++ G++V DG +AL LQ FS D L++LDI++P Sbjct: 33 ILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIMLP 92 Query: 83 RMNGYEVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIK 142 ++NG +VCR ++ N P+++ S+KG E ++ G+ GAD YI KPF ELV + Sbjct: 93 QVNGLDVCRSLRFGGD--NTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARCR 150 Query: 143 QLLR 146 ++R Sbjct: 151 AMIR 154 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 86.3 bits (212), Expect = 4e-20 Identities = 44/113 (38%), Positives = 68/113 (60%) Query: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 +LLV+D + +++S +L + G+ V G AL LQ PDL++LDI MP M+GY+V Sbjct: 11 ILLVDDLPNNLQLLSDLLINLGYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQV 70 Query: 90 CRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIK 142 C IK + + +++P+I S+ G+ FD+ G YI KPFQ E+V I+ Sbjct: 71 CEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQIEEVVARIE 123 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 79.0 bits (193), Expect = 7e-18 Identities = 40/117 (34%), Positives = 67/117 (57%), Gaps = 2/117 (1%) Query: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 VL+VE+ + LK G+ V++A DG++ + Q F PDL++++ +P M+G E+ Sbjct: 5 VLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLEL 64 Query: 90 CRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLLR 146 CRR++ +P+I+ ++K + +R G+ GAD YI KPF E I+ LR Sbjct: 65 CRRLRE--MGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLR 119 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 74.3 bits (181), Expect = 2e-16 Identities = 36/108 (33%), Positives = 68/108 (62%) Query: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 +LLVED+ +E+ + +L+D G+ V +A +G+ ALE+L N + LV++D+ MP M+G E Sbjct: 927 ILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIEA 986 Query: 90 CRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMEL 137 I+ +P+ +P++ ++ + DR ++ G + ++ KP +P EL Sbjct: 987 TIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEEL 1034 Score = 46.2 bits (108), Expect = 5e-08 Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 5/121 (4%) Query: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKL-----QNFSPDLVVLDIVMPRM 84 VL+V+D+ R ++ +L+ + V G EAL L +N +V +D MP M Sbjct: 773 VLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPNM 832 Query: 85 NGYEVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQL 144 +G EV RR+K+ + + ++ G E G D + KP P L ++ ++ Sbjct: 833 DGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISPSVLFDSLARV 892 Query: 145 L 145 L Sbjct: 893 L 893 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 72.8 bits (177), Expect = 5e-16 Identities = 41/116 (35%), Positives = 64/116 (55%), Gaps = 3/116 (2%) Query: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 +L+VED R + GI + G+ V A +GVE L N + +LVV+DI +P NG + Sbjct: 6 ILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGLLL 65 Query: 90 CRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLL 145 R ++ + ++P+I + + E D+ G+ GAD Y+ KPF P EL + LL Sbjct: 66 ARELREE---LSLPLIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLL 118 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 72.4 bits (176), Expect = 6e-16 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 2/122 (1%) Query: 27 MNAVLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFS--PDLVVLDIVMPRM 84 M+ +L+VED + RE+I L +++ A +G AL L + PDL++ D++MP M Sbjct: 1 MSTILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEM 60 Query: 85 NGYEVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQL 144 +G+ + ++ + KT +P I ++ G D GM GAD Y+ KPF+ +L+ + Sbjct: 61 DGHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSR 120 Query: 145 LR 146 L+ Sbjct: 121 LQ 122 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 71.2 bits (173), Expect = 1e-15 Identities = 38/119 (31%), Positives = 67/119 (56%) Query: 27 MNAVLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNG 86 M VLLVED+ R+M+S L G++V IA DG +A+ + SP L+++D+ +P ++G Sbjct: 4 MAKVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDG 63 Query: 87 YEVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLL 145 + ++IK P ++P+I ++ DR + G D Y KP + L+ ++ L+ Sbjct: 64 WTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEALI 122 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 68.9 bits (167), Expect = 7e-15 Identities = 36/113 (31%), Positives = 63/113 (55%) Query: 29 AVLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYE 88 ++LLVED+ RE +L G +V +A +G EAL L + + D +++DI MP +NGY+ Sbjct: 719 SILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYD 778 Query: 89 VCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTI 141 R I+ +N+P+I ++ D+ + G + ++ KP +P L T+ Sbjct: 779 ATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLFQTL 831 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 68.9 bits (167), Expect = 7e-15 Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 1/117 (0%) Query: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 +L+VED + REMI+ L + V A D A+ K++ +P L++LD ++P +G + Sbjct: 5 ILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKE-NPKLILLDWMLPGRSGIQF 63 Query: 90 CRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLLR 146 + IK +P+IM ++K E D + GAD YI KPF P L+ I+ + R Sbjct: 64 IQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWR 120 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 67.8 bits (164), Expect = 2e-14 Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 2/120 (1%) Query: 27 MNAVLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNG 86 M +LLV+D ++ E +S L G + +A G L DL++LD ++P+++G Sbjct: 1 MANILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSG 60 Query: 87 YEVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLLR 146 E+CR+I+ + PV+ ++K DR G+ G D Y+ KPF+ EL+ ++ LLR Sbjct: 61 LEICRQIRI--LGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFELRELLARVRALLR 118 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 67.0 bits (162), Expect = 3e-14 Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 2/117 (1%) Query: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 +LLVED E ++ L D + V IA D A + DLV+LD+++P ++G + Sbjct: 3 ILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGITL 62 Query: 90 CRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLLR 146 C++ +S + +P++M +++ D+ G+ GAD Y+ KP EL ++ LLR Sbjct: 63 CQKWRS--HSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLR 117 >SYNE-PCC-01-002221 slr1213 Length = 241 Score = 66.6 bits (161), Expect = 4e-14 Identities = 42/122 (34%), Positives = 69/122 (56%), Gaps = 9/122 (7%) Query: 30 VLLVEDSSSQREMISGILKDHGWQV-TIACDGVEALEKLQNFSPDLVVLDI-VMPRMNGY 87 +L+VED + I+ +LK G+++ IA DG AL+K+ F PDLV+LDI + ++G Sbjct: 5 ILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEIDGI 64 Query: 88 EVCRRIKSDPKTKNVPVIMCS--SKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLL 145 EV RIKS ++P++ + S GE +R + Y+ KPF+ +L+ T+ + Sbjct: 65 EVAERIKS---LYSIPIVYLTAFSDGETLER--AQKTNPQGYVIKPFRREQLLSTVAIAI 119 Query: 146 RN 147 N Sbjct: 120 AN 121 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 64.7 bits (156), Expect = 1e-13 Identities = 37/119 (31%), Positives = 69/119 (57%), Gaps = 4/119 (3%) Query: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPD--LVVLDIVMPRMNGY 87 +LLVED + I +L + V DG +A + L+N + L ++D ++P ++G Sbjct: 3 ILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSGL 62 Query: 88 EVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLLR 146 E+C+++++ + ++PV+M ++ GE +R G+ GAD Y+ KPF EL+ ++ L R Sbjct: 63 ELCQKLRT--QGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAELLARLRALQR 119 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 61.2 bits (147), Expect = 1e-12 Identities = 30/104 (28%), Positives = 59/104 (56%) Query: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 +L+V+D S R+++ +L G+++ A +G EA+ +++ P L+ +D+ MP M+GYE Sbjct: 632 ILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYEA 691 Query: 90 CRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQ 133 + IK K V+ ++ E ++ + G D ++ KPF+ Sbjct: 692 TKYIKGQVKGNATAVVALTASVLEEEKAIVLSAGCDDFLRKPFR 735 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 60.8 bits (146), Expect = 2e-12 Identities = 31/116 (26%), Positives = 67/116 (57%) Query: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 VL+V+D R ++ +L G+ V A +G A+ +++ P ++++D+ MP ++G Sbjct: 420 VLVVDDRPESRLLLRQLLTSLGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRST 479 Query: 90 CRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLL 145 ++IK+ P+ ++ +I ++ E +R + G D +++KPF+P EL+ + + L Sbjct: 480 TQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIALLAKHL 535 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 60.1 bits (144), Expect = 3e-12 Identities = 35/116 (30%), Positives = 58/116 (50%) Query: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 +L+V+D R + L+ G +V +A +G EAL K P++V+LD VMP M+G+ Sbjct: 14 ILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGFAC 73 Query: 90 CRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLL 145 C+ + + + V+M + +E GA Y+ KP L +K+LL Sbjct: 74 CQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLL 129 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 59.7 bits (143), Expect = 4e-12 Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 2/117 (1%) Query: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 +LL+ED + + L G+ V DG + L + D VVLD+ +P+++G EV Sbjct: 3 ILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLEV 62 Query: 90 CRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLLR 146 ++ +S+ + +VPV++ +++ +R G++ GAD Y+ KPF E+ ++ L+R Sbjct: 63 LQQWRSNHQ--DVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIR 117 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 56.6 bits (135), Expect = 4e-11 Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 1/109 (0%) Query: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 +LL ED+ +++ +L + G+ V IA +G E ++ L+ DLV++D+ MP M+G Sbjct: 1192 ILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGITA 1251 Query: 90 CRRIKSD-PKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMEL 137 CR I+ P + ++ ++ DR + G D YI+KP +L Sbjct: 1252 CRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQL 1300 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 55.1 bits (131), Expect = 1e-10 Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 4/119 (3%) Query: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQN--FSPDLVVLDIVMPRMNGY 87 +LLVED + L+ + V DG A L + L + D ++P ++G Sbjct: 3 LLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSGL 62 Query: 88 EVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLLR 146 E+C++++ + ++P++M ++K + DR G+ GAD Y+ KPF EL+ ++ L R Sbjct: 63 ELCQKLRG--QRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAELLARLRSLQR 119 >SYNE-PCC-01-000877 sll1330 Length = 250 Score = 51.2 bits (121), Expect = 2e-09 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 3/117 (2%) Query: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 + +VE + R ++S L+ G+ V +A + N P L V+D + +G E+ Sbjct: 6 ISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGDGIEL 65 Query: 90 CRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLLR 146 CR + ++ + + S+K E D G++ GAD Y+ KPF E + I+ L+R Sbjct: 66 CRWLYQQHQSM---IFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIR 119 >SYNE-PCC-01-000608 sll0921 Length = 222 Score = 47.0 bits (110), Expect = 3e-08 Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 4/116 (3%) Query: 30 VLLVEDSSSQREMISGILK---DHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNG 86 + L+ED R+ + L W V A +G L +Q PD+V++DI +P MNG Sbjct: 6 IALIEDEDLIRQGLQDALTMEPSFEW-VGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNG 64 Query: 87 YEVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIK 142 +V +++K P V++ + +E GADAY K + L+ I+ Sbjct: 65 IDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQ 120 >SYNE-PCC-01-001575 slr0312 Length = 209 Score = 45.1 bits (105), Expect = 1e-07 Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 4/119 (3%) Query: 30 VLLVEDSSSQREMISGIL-KDHGWQVTIACD-GVEALEKLQNFSPDLVVLDIVMPRMNGY 87 VL+ +D + R+ ++ I+ +D QV + G +A+ + PD+ ++D+ MP + G Sbjct: 9 VLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPEVEGV 68 Query: 88 EVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLLR 146 I + K + V+ E+ R G++ GA Y+ K +P EL+ I+ + R Sbjct: 69 AAISAICAIVKFARIIVLTTYDSDEDIYR--GLQAGAKGYLLKETEPDELLNAIRTVHR 125 >SYNE-PCC-01-002778 slr1969 Length = 750 Score = 42.7 bits (99), Expect = 5e-07 Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 2/123 (1%) Query: 22 AERTFMNAVLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVM 81 A F ++V+++E +I +L +QV D AL++++ P L+++D Sbjct: 624 AAMPFNSSVIVIEQDEEIATLICELLTVANYQVIWLIDTTNALQQVELLQPGLIIVDGDF 683 Query: 82 PRMNGYEVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTI 141 + EV R IK + V V + S + ++G D Y+ KP QP L+ + Sbjct: 684 VDVT--EVTRGIKKSRRISKVTVFLLSESLSSAEWQALSQKGIDDYLLKPLQPELLLQRV 741 Query: 142 KQL 144 + + Sbjct: 742 QSI 744 >HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator protein (narP) Length = 208 Score = 42.7 bits (99), Expect = 5e-07 Identities = 29/117 (24%), Positives = 57/117 (48%), Gaps = 4/117 (3%) Query: 30 VLLVEDSSSQREMISGI--LKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGY 87 VLL++D R I + L D+ V G E + SPD+++LD+ M ++G Sbjct: 7 VLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLSGL 66 Query: 88 EVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQL 144 + + ++++ + ++ S + D + + GAD Y+ K +P L+ IK++ Sbjct: 67 DTLKGLRAEGVDARILILTVSD--AKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRI 121 >SYNE-PCC-01-001160 sll1708 Length = 226 Score = 38.9 bits (89), Expect = 8e-06 Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 4/103 (3%) Query: 30 VLLVEDSSSQREMISGILKDHG-WQVTIACD-GVEALEKLQNFSPDLVVLDIVMPRMNGY 87 +L+VED + + L H +++ D G A+++ +PDL+V+DI +P ++G Sbjct: 19 ILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPGLDGI 78 Query: 88 EVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAK 130 E ++IK + + +++ +S + + GADAY K Sbjct: 79 EATKQIKQ--TSPQIHIVVLTSHTLPNEIIAALSSGADAYCVK 119 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.321 0.137 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,520 Number of Sequences: 78 Number of extensions: 539 Number of successful extensions: 58 Number of sequences better than 1.0e-05: 33 Number of HSP's better than 0.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 13 Number of HSP's gapped (non-prelim): 36 length of query: 147 length of database: 48,235 effective HSP length: 56 effective length of query: 91 effective length of database: 43,867 effective search space: 3991897 effective search space used: 3991897 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 89 (38.9 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-002220 slr1212 (844 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-002220 slr1212 1624 0.0 SYNE-PCC-01-000542 sll0821 143 2e-36 SYNE-PCC-01-000983 sll1473 141 7e-36 SYNE-PCC-01-002617 slr1759 140 2e-35 SYNE-PCC-01-002778 slr1969 126 3e-31 SYNE-PCC-01-001517 slr0222 104 1e-24 SYNE-PCC-01-001690 slr0473 57 2e-10 SYNE-PCC-01-002879 slr2104 45 7e-07 SYNE-PCC-01-002873 slr2098 45 7e-07 SYNE-PCC-01-000891 sll1353 45 9e-07 >SYNE-PCC-01-002220 slr1212 Length = 844 Score = 1624 bits (4205), Expect = 0.0 Identities = 824/844 (97%), Positives = 824/844 (97%) Query: 1 MAITAFTLGDFFQANSYIPHGHCYLWQTPLVWLHVSADFFTAIAYYSIPLTLLYFLRKRQ 60 MAITAFTLGDFFQANSYIPHGHCYLWQTPLVWLHVSADFFTAIAYYSIPLTLLYFLRKRQ Sbjct: 1 MAITAFTLGDFFQANSYIPHGHCYLWQTPLVWLHVSADFFTAIAYYSIPLTLLYFLRKRQ 60 Query: 61 DIPFPNIIFLFSTFILCCGTSHFFDIITLWYPIYWISGTVKASMAIVSIITVFELIQIVP 120 DIPFPNIIFLFSTFILCCGTSHFFDIITLWYPIYWISGTVKASMAIVSIITVFELIQIVP Sbjct: 61 DIPFPNIIFLFSTFILCCGTSHFFDIITLWYPIYWISGTVKASMAIVSIITVFELIQIVP 120 Query: 121 NALNLKSPTELATLNLALNQEIKERQTAEIALQELNNNLEKRVEDRTTQLAKINQQLEQE 180 NALNLKSPTELATLNLALNQEIKERQTAEIALQELNNNLEKRVEDRTTQLAKINQQLEQE Sbjct: 121 NALNLKSPTELATLNLALNQEIKERQTAEIALQELNNNLEKRVEDRTTQLAKINQQLEQE 180 Query: 181 IEDKTRAKEDLEKNKDQLAQLAAIVESSQDAIISKTLDGNITSWNESAERLFGYTAEEMI 240 IEDKTRAKEDLEKNKDQLAQLAAIVESSQDAIISKTLDGNITSWNESAERLFGYTAEEMI Sbjct: 181 IEDKTRAKEDLEKNKDQLAQLAAIVESSQDAIISKTLDGNITSWNESAERLFGYTAEEMI 240 Query: 241 GSHXXXXXXXXXXXXXXXXXXXXRQGQRINTYETQRQRKDGTKIDVALTISPIRDEHKNV 300 GSH RQGQRINTYETQRQRKDGTKIDVALTISPIRDEHKNV Sbjct: 241 GSHITKLIPEELILEEDLIAECIRQGQRINTYETQRQRKDGTKIDVALTISPIRDEHKNV 300 Query: 301 VGASKIVRDITARLDVENALRESQYFIEKLANYSPQILYILDPIAWKNIYVNYQSFEILG 360 VGASKIVRDITARLDVENALRESQYFIEKLANYSPQILYILDPIAWKNIYVNYQSFEILG Sbjct: 301 VGASKIVRDITARLDVENALRESQYFIEKLANYSPQILYILDPIAWKNIYVNYQSFEILG 360 Query: 361 YTPEEFKNGGTELLLNIVHPDDIPTLYENKNFWQKSQEGQVLTTEYRMRHKNGSWRWLRS 420 YTPEEFKNGGTELLLNIVHPDDIPTLYENKNFWQKSQEGQVLTTEYRMRHKNGSWRWLRS Sbjct: 361 YTPEEFKNGGTELLLNIVHPDDIPTLYENKNFWQKSQEGQVLTTEYRMRHKNGSWRWLRS 420 Query: 421 REVVFARDDYGQVTKVLGTAQDISDSKEQEQRLYEQGRRESLLREITQRIRQSLDLPTIF 480 REVVFARDDYGQVTKVLGTAQDISDSKEQEQRLYEQGRRESLLREITQRIRQSLDLPTIF Sbjct: 421 REVVFARDDYGQVTKVLGTAQDISDSKEQEQRLYEQGRRESLLREITQRIRQSLDLPTIF 480 Query: 481 NTVVQEIRQFLEADRVVIFQFSPDSDFSVGNIVAESVLAPFKPIINSAIEETCFSNNYAQ 540 NTVVQEIRQFLEADRVVIFQFSPDSDFSVGNIVAESVLAPFKPIINSAIEETCFSNNYAQ Sbjct: 481 NTVVQEIRQFLEADRVVIFQFSPDSDFSVGNIVAESVLAPFKPIINSAIEETCFSNNYAQ 540 Query: 541 RYQQGRIQVIEDIHQSHLRQCHIDFLARLQVRANLVLPLINDAILWGLLCIHQCDSSRVW 600 RYQQGRIQVIEDIHQSHLRQCHIDFLARLQVRANLVLPLINDAILWGLLCIHQCDSSRVW Sbjct: 541 RYQQGRIQVIEDIHQSHLRQCHIDFLARLQVRANLVLPLINDAILWGLLCIHQCDSSRVW 600 Query: 601 EQTEIDLLKQITNQFEIAIQQATLYEQAQQELASKNQLFVQLTNELEQKKVLLKEIHHRV 660 EQTEIDLLKQITNQFEIAIQQATLYEQAQQELASKNQLFVQLTNELEQKKVLLKEIHHRV Sbjct: 601 EQTEIDLLKQITNQFEIAIQQATLYEQAQQELASKNQLFVQLTNELEQKKVLLKEIHHRV 660 Query: 661 KNNLQIMSSLLYLQFSKASPAIQQLSEEYQNRIQSMALIHEQLYRSEDLANIDFSQYLKN 720 KNNLQIMSSLLYLQFSKASPAIQQLSEEYQNRIQSMALIHEQLYRSEDLANIDFSQYLKN Sbjct: 661 KNNLQIMSSLLYLQFSKASPAIQQLSEEYQNRIQSMALIHEQLYRSEDLANIDFSQYLKN 720 Query: 721 LTHNICQSYGCNTDSIKIKLLVEQVKVPLEQSIPLGLIIQELVSNALKHAFPTTEGEISI 780 LTHNICQSYGCNTDSIKIKLLVEQVKVPLEQSIPLGLIIQELVSNALKHAFPTTEGEISI Sbjct: 721 LTHNICQSYGCNTDSIKIKLLVEQVKVPLEQSIPLGLIIQELVSNALKHAFPTTEGEISI 780 Query: 781 KFTSMNSHYSLQVWDNGVGISRDIDLENTDSLGMQLIYSLTEQLQGELHYEYVGGAQFGL 840 KFTSMNSHYSLQVWDNGVGISRDIDLENTDSLGMQLIYSLTEQLQGELHYEYVGGAQFGL Sbjct: 781 KFTSMNSHYSLQVWDNGVGISRDIDLENTDSLGMQLIYSLTEQLQGELHYEYVGGAQFGL 840 Query: 841 EFSL 844 EFSL Sbjct: 841 EFSL 844 >SYNE-PCC-01-000542 sll0821 Length = 1276 Score = 143 bits (361), Expect = 2e-36 Identities = 71/180 (39%), Positives = 115/180 (63%), Gaps = 3/180 (1%) Query: 450 EQRLYEQGRRESLLREITQRIRQSLDLPTIFNTVVQEIRQFLEADRVVIFQFSPDSDFSV 509 ++RL ++ +E L+ +I +IR SL++ I + V E+RQFL DRVV+F+F+ S +S Sbjct: 914 KERLQQRNVKEKLVLKIANKIRASLNINDILYSTVTEVRQFLNTDRVVLFKFN--SQWS- 970 Query: 510 GNIVAESVLAPFKPIINSAIEETCFSNNYAQRYQQGRIQVIEDIHQSHLRQCHIDFLARL 569 G +V ES + IIN I++ CF +Y + Y++GR++ + DI ++ L CH + L Sbjct: 971 GQVVTESHNDFCRSIINDEIDDPCFKGHYLRLYREGRVRAVSDIEKADLADCHKELLRHY 1030 Query: 570 QVRANLVLPLINDAILWGLLCIHQCDSSRVWEQTEIDLLKQITNQFEIAIQQATLYEQAQ 629 QV+ANLV+P++ + LWGLL H+C + R W++ ++ LL ++ Q IAI Q LYEQ + Sbjct: 1031 QVKANLVVPVVFNENLWGLLIAHECKTPRYWQEEDLQLLMELATQVAIAIHQGELYEQLE 1090 Score = 70.1 bits (170), Expect = 3e-14 Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 27/195 (13%) Query: 460 ESLLREITQRIRQSLDLPTIFNTVVQEIRQFLEADRVVIFQFSPDSDFSVGNIVAESVLA 519 E LR + + ++L L +V+E R FL DRV I++F+ D G ++AE+V Sbjct: 8 EDFLRNVINKFHRALTLRETLQVIVEEARIFLGVDRVKIYKFASDGS---GEVLAEAVNR 64 Query: 520 -----------PFKPIINSAIEET-----CFSNNYAQRYQQ-----GRIQVIEDI--HQS 556 P + I A EE + + A R ++ GRI E H + Sbjct: 65 AALPSLLGLHFPVEDIPPQAREELGNQRKMIAVDVAHRRKKSHELSGRISPTEHSNGHYT 124 Query: 557 HLRQCHIDFLARLQVRANLVLPLINDAILWGLLCIHQCDSSRVWEQTEIDLLKQITNQFE 616 + CHI +L + V ++L +P++ D LWG++ +H R EQ E + + ++ + Sbjct: 125 TVDSCHIQYLLAMGVLSSLTVPVMQDQQLWGIMAVHHSKPRRFTEQ-EWETMALLSKEVS 183 Query: 617 IAIQQATLYEQAQQE 631 +AI Q+ L Q Q+ Sbjct: 184 LAITQSQLSRQVHQQ 198 >SYNE-PCC-01-000983 sll1473 Length = 481 Score = 141 bits (356), Expect = 7e-36 Identities = 80/239 (33%), Positives = 128/239 (53%), Gaps = 29/239 (12%) Query: 450 EQRLYEQGRRESLLREITQRIRQSLDLPTIFNTVVQEIRQFLEADRVVIFQFSPDSDFSV 509 E + +Q +RE + +ITQ IRQSL+L T+ NT V E++ L+ DRV+I++ D Sbjct: 33 EISIKQQTQRERFINQITQHIRQSLNLETVLNTTVAEVKTLLQVDRVLIYRIWQDG---T 89 Query: 510 GNIVAESVLAPFKPIINSAIEETCFSNNYAQRYQQGRIQVIEDIHQSHLRQCHIDFLARL 569 G+ + ESV A + I+ + F Y Q Y +G+++ I DI Q + C DF+ + Sbjct: 90 GSAITESVNANYPSILGRTFSDEVFPVEYHQAYTKGKVRAINDIDQDDIEICLADFVKQF 149 Query: 570 QVRANLVLPLIND------------AILWGLLCIHQCDSSRVWEQTEIDLLKQITNQFEI 617 V++ LV+P++ LWGLL HQC +R W+ E++L+KQ+ NQ I Sbjct: 150 GVKSKLVVPILQHNRASSLDNESEFPYLWGLLITHQCAFTRPWQPWEVELMKQLANQVAI 209 Query: 618 AIQQATLYEQAQ--------------QELASKNQLFVQLTNELEQKKVLLKEIHHRVKN 662 AIQQ+ LYEQ Q Q+LA+ NQ +E ++ + L+ +H +++ Sbjct: 210 AIQQSELYEQLQQLNKDLENRVEKRTQQLAATNQSLRMEISERQKTEAALRHTNHTLQS 268 Score = 95.9 bits (237), Expect = 4e-22 Identities = 73/244 (29%), Positives = 112/244 (45%), Gaps = 13/244 (5%) Query: 128 PTELATLNLALNQEIKERQTAEI--ALQELNNNLEKRVEDRTTQLAKINQQLEQEIEDKT 185 P E+ + NQ Q +E+ LQ+LN +LE RVE RT QLA NQ L EI ++ Sbjct: 194 PWEVELMKQLANQVAIAIQQSELYEQLQQLNKDLENRVEKRTQQLAATNQSLRMEISERQ 253 Query: 186 RAKEDLEKNKDQLAQLAAIVESSQDAIISKTLDGNITSWNESAERLFGYTAEEMIGSHXX 245 + + L L L A +S I + L I WN +AER+FG+T E+I +H Sbjct: 254 KTEAALRHTNHTLQSLIA---ASPRGIFTLNLADQIQIWNPTAERIFGWTETEII-AHPE 309 Query: 246 XXXXXXXXXXXXXXXXXXRQGQRINTYETQRQRKDGTKIDVALTISPIRDEHKNVVGASK 305 G + E + Q+KDG+ I++ L+ +P+ D +N+ G Sbjct: 310 LLTSNILLEDYQQFKQKVLSGMVSPSLELKCQKKDGSWIEIVLSAAPLLDSEENIAGLVA 369 Query: 306 IVRDITARLDVENALRESQYFIEKLANYSPQILYI----LDPIAWKNIYVNYQSFEILGY 361 +V DIT + +R Q + N + ++ +D + +YVN +I GY Sbjct: 370 VVADITEQKRQAEQIRLLQSVV---VNTNDAVVITEAEPIDDPGPRILYVNEAFTKITGY 426 Query: 362 TPEE 365 T EE Sbjct: 427 TAEE 430 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 140 bits (352), Expect = 2e-35 Identities = 127/471 (26%), Positives = 212/471 (45%), Gaps = 18/471 (3%) Query: 171 AKINQQLEQEIEDKTRAKEDLEKNKDQLAQLAAIVESSQDAIISKTLDGNITSWNESAER 230 +K ++QL + I+ + + +E L+ +LA ++ + I+ T +G IT N+ Sbjct: 304 SKHSEQLSESIKQQQKVEEFLKSTLQELAVQKTALDEAAIVAITDT-EGVITYVNDKFVE 362 Query: 231 LFGYTAEEMIGSHXXXXXXXXXXXXXXXXXXXXRQGQRINTYETQRQRKDGTKIDVALTI 290 + GY+ EE+IG+ + ++ + + K G V T+ Sbjct: 363 VSGYSREELIGNTHRLVSSGYHSPEFFQQFWQTIRAGKVWHGQINNRAKAGNTYWVDSTV 422 Query: 291 SPIRDEHKNVVGASKIVRDITARLDVENALRESQYFIEKLANYSPQILYILDPIAWKNIY 350 P D++ N I +IT+ E +LRES+ +A+ SP +L++ D K + Sbjct: 423 VPFLDDNGNPYQYLAIRFEITSSKQAEKSLRESEARFRMMADTSPIMLWVADQDK-KMTF 481 Query: 351 VNYQSFEILGYTPEEFKNGGTELLLNIVHPDDIPTLYENKNFWQKSQEGQVLTTEYRMRH 410 VN E G T E G L +HPDD + + Q + + EYR R Sbjct: 482 VNQSWLEFRGATLAEESGNG---YLEGIHPDDKG--HYLGVYSQAFGDRRRFELEYRYRR 536 Query: 411 KNGSWRWLRSREVVFARDDYGQVTKVLGTAQDISDSKEQEQRLYEQGRRESLLREITQRI 470 + +RW+ + V +D G+ +G+ DI+D K+ + L ++ + L+R+I+Q I Sbjct: 537 VDQQYRWIVNVGVPRYLED-GKFMGYVGSCLDITDRKQAQDILQKKLNQILLMRKISQEI 595 Query: 471 RQSLDLPTIFNTVVQEIRQFLEADRVVIFQFSPDSDFSVGNIVAESVLAPFKPIINSAIE 530 R+SL IF T +++ R +I +S + V +VAE + F ++ Sbjct: 596 RRSLQPTLIFQTAARQVGNVFAVSRCLIHNYSEATTLQVP-VVAEYLGGQFTSLLAG--- 651 Query: 531 ETCFSNNYAQRYQQG-RIQVIEDIHQSHLRQCHID-FLARLQVRANLVLPLINDAILWGL 588 E Y QG R + D+ Q L H F R QV++ L + G+ Sbjct: 652 EIAVEQAYDPTIIQGDRAMAVVDLDQD-LNSTHTKAFYQRFQVKSFLAVRTSYQGKANGI 710 Query: 589 LCIHQCDSSRVWEQTEIDLLKQITNQFEIAIQQATLYE---QAQQELASKN 636 + +HQCD RVW EI+LL+ I Q IA+ QA L E + ++ELA KN Sbjct: 711 IALHQCDRQRVWTADEIELLEAIAEQMGIALAQAALLEKERERRRELAQKN 761 >SYNE-PCC-01-002778 slr1969 Length = 750 Score = 126 bits (316), Expect = 3e-31 Identities = 109/399 (27%), Positives = 175/399 (43%), Gaps = 60/399 (15%) Query: 456 QGRRESLLREITQRIRQSLDLPTIFNTVVQEIRQFLEADRVVIFQF-------------- 501 Q + LL ++ +IRQSLDL I N V +++FL DR+VI+QF Sbjct: 155 QASQVKLLSQVIAQIRQSLDLSEILNNAVTAVQKFLFVDRLVIYQFHYSQPSLTPLEENQ 214 Query: 502 --SPDSDFSVGNIVAESVLAP-FKPIINSAIEETCFSN--NYAQRYQQGRIQVIEDIHQS 556 +P G + E+ +P ++ E CFS +Y Q+Y +G + + DI Sbjct: 215 IPAPRPRQQYGEVTYEARRSPEIDTMLGIMTENDCFSQVFSYEQKYLKGAVVAVSDIENH 274 Query: 557 HLRQ-CHIDFLARLQVRANLVLPLINDAILWGLLCIHQCDSSRVWEQTEIDLLKQITNQF 615 + C + L R QVRA LV P+I + LWGLL HQC R W +E + L QI Sbjct: 275 YSSSYCLVGLLQRYQVRAKLVAPIIVEGQLWGLLIAHQCHHPRQWLDSEKNFLGQIGEHL 334 Query: 616 EIAIQQATLYEQAQQELASKNQLFVQLTNELEQ-----------KKVLLKEIHHRVKNNL 664 +AI Q+ LY + Q++ + + ++ T EL K + I H ++ L Sbjct: 335 AVAIVQSLLYSEVQKQKNNFEKRVIERTKELRDTLMAAQAANLLKSQFINNISHELRTPL 394 Query: 665 Q--IMSSLLYLQFSKASPAIQQLSEEYQNRIQSMALIHEQLYRSEDLAN--IDFSQYLKN 720 I S L++ ++ ++Y + I E + D N I SQ Sbjct: 395 TSIIGLSATLLRWFDHPASLPPAKQQYY-----LLNIQENGKKLLDQINSIIQLSQLESG 449 Query: 721 LTHNICQSYGCNT------DSIKIKLLVEQVKVPLEQSIPLG------------LIIQEL 762 T CQS+ +T S+ + +Q+ + L+ I +G I+ +L Sbjct: 450 QTALNCQSFSLHTLAQTVIHSLLGVAIKQQINLELDYQINVGQDQFCADQERLDQILTQL 509 Query: 763 VSNALKHAFPTTEGEISIKFTSMNSHYSLQVWDNGVGIS 801 ++NALK F EG + ++ ++ QV D G+GI+ Sbjct: 510 LNNALK--FTPAEGTVILRIWKESNQAIFQVEDTGIGIN 546 >SYNE-PCC-01-001517 slr0222 Length = 1178 Score = 104 bits (260), Expect = 1e-24 Identities = 159/692 (22%), Positives = 278/692 (40%), Gaps = 118/692 (17%) Query: 141 EIKERQTAEIALQELNNNLEKRVEDRTTQLAKINQQLEQEIEDKTRAKEDLEKNKDQLAQ 200 +I ER+ AEI L+ +N NLE +E+RT++L N QL QEI +K + L Q A+ Sbjct: 496 DITERKLAEIQLKTINENLEVLIEERTSELESSNSQLLQEIIEKEQVSITL---TTQEAK 552 Query: 201 LAAIVESSQDAIISKTLDGNITSWNESAERLFGYTAEEMIGSHXXXXXXXX--XXXXXXX 258 A+V + DAII T+D + N A L GY EE+IG Sbjct: 553 YRALVRDAGDAIILITIDFIVLEVNYRAVELSGYDQEELIGHSLLDLRLLTPEFYAQQRH 612 Query: 259 XXXXXRQGQRINTYETQRQRKDGTKIDVALTISPIRDEHKNVVGASKIVRDITARLDVEN 318 ++ Q + + +K G I V ++ S I E+ ++V IV DIT + ++ Sbjct: 613 FWRTLKREQISQLTDVRLVKKSGELISVDISASVITYENHSIVQC--IVHDITLQKTIQA 670 Query: 319 ALRESQYF----IEKLAN-----YSPQILYILDPIAWKNIYVNYQSFEILGYTPEEFKN- 368 L+ YF +EK+ Y + L W + N I GY+ EE Sbjct: 671 QLQRENYFRRQLLEKMVEGLFVCYEVEQFPFLQFTVWNPMMKN-----ITGYSQEEINQC 725 Query: 369 GGTELLLNIVHPDDIPTLYENKNFWQKSQEGQVLTTEYRMRHKNGSWRWLRSREVVFARD 428 G E L + P + + + ++ E+++ ++G+ LR+ E+ A Sbjct: 726 GWYETLYSHGQPQEAVRV----RMKAVALGVDMVKEEWQIIRRDGA---LRTVEISTALI 778 Query: 429 DYGQVTKVLGTAQDISDSKEQEQRLYEQGRRESLLREITQRIRQSLDLPTIFNTVVQEIR 488 T +L QDI+D K Q Q + E+ LR I + + + TI + I Sbjct: 779 TSNNQTNILAVIQDITDQKRQLQIIQ---NNEATLRCIVENLPIFFGMRTINFSNWYYIN 835 Query: 489 QFLEADRVVIFQFSPDSDFSVGNIVAESVLAPFKPIINSAIEETCFSNNYAQRYQQGRIQ 548 E+ + ++PD + P++ I YA+ +Q R Sbjct: 836 PSFES----LTGYTPDEMYE-------------DPLLWQKIHR----EEYAENLEQARPN 874 Query: 549 VIEDIHQSHLRQCHIDFLARLQVRANLVLPLINDAILWGLLCIHQCDSSRVWEQTEIDLL 608 + E W + + + D +++W QT L+ Sbjct: 875 LGE----------------------------------WTIFSMEKKDGTQIWAQTVEFLV 900 Query: 609 KQITNQFEIAIQQATLYEQAQQELASKNQLFVQLTNELEQKKVLLKEIHHRVKNNLQIM- 667 +++ + + + + + E+ + L V+ E K + + H + L + Sbjct: 901 DDLSDTARVVVFGQDITDIKRAEIETLRSL-VKERELNEAKSQFVDIVSHEFRTPLTSII 959 Query: 668 --SSLLYLQFSKASPAIQQLSEEYQNRIQSMA-----LIHEQLYRSE--------DLANI 712 LL F + S + ++Y N IQ+ + LI + L S +L NI Sbjct: 960 GFGELLSKYFDRLS---TEKKQQYINNIQNSSQRLKQLIDDVLSISRYDANKIEIELGNI 1016 Query: 713 DFSQYLKNLTHNICQSYGCNTDSIKIKLLVEQVKVPLEQSIP----LGLIIQELVSNALK 768 + L+NL +++ +++ C S L +K P E S+ L I++ ++SNA+K Sbjct: 1017 N----LRNLANDLIENFSCGLGSEHNFELNYHLK-PDEHSLVDVRLLRHILENILSNAIK 1071 Query: 769 HAFPTTEGEISIKFTSMNSHYSLQVWDNGVGI 800 ++ P + I++ + H QV D G+GI Sbjct: 1072 YSAPGS--TITLDISKDEEHLLFQVRDEGIGI 1101 >SYNE-PCC-01-001690 slr0473 Length = 748 Score = 57.0 bits (136), Expect = 2e-10 Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 27/148 (18%) Query: 469 RIRQSLDLPTIFNTVVQEIRQFLEADRVVIFQFSPDSDFSVGNIVAESVLAPFKPIINSA 528 R+RQ +L ++ +V+E+R+ DRV++++F ++ G+++AE +P + Sbjct: 146 RLRQQANLRDFYDVIVEEVRRMTGFDRVMLYRFDENNH---GDVIAEDKRDDMEPYLGLH 202 Query: 529 IEETCFSNNYAQRYQQGRIQVIEDIH---------------------QSHLRQ---CHID 564 E+ + + I+VI D++ +S LR CH+ Sbjct: 203 YPESDIPQPARRLFIHNPIRVIPDVYGVAVPLTPAVNPSTNRAVDLTESILRSAYHCHLT 262 Query: 565 FLARLQVRANLVLPLINDAILWGLLCIH 592 +L + V A+L + LI D LWGL+ H Sbjct: 263 YLKNMGVGASLTISLIKDGHLWGLIACH 290 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 45.4 bits (106), Expect = 7e-07 Identities = 31/114 (27%), Positives = 59/114 (51%), Gaps = 6/114 (5%) Query: 131 LATLNLALNQEIKERQTAEIALQELNNNLEKRVEDRTTQLAKINQQLEQEIEDKTRAKED 190 L L+ Q++ E Q A+I+L+ LN LE+R+++RT +L + L +E K A+ Sbjct: 398 LPLLSRGTIQDVTELQEAQISLEHLNEKLEQRIQERTQELENSQESL---LEAKLVAEGA 454 Query: 191 LEKNKDQLAQLAAIVESSQDAIISKT---LDGNITSWNESAERLFGYTAEEMIG 241 + + LA ++ + + +AII + L ++TS + + Y E ++G Sbjct: 455 TKAKSEFLANMSHEIRTPMNAIIGMSELVLQTDLTSQQRNYLQKVQYAGELLLG 508 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 45.4 bits (106), Expect = 7e-07 Identities = 70/312 (22%), Positives = 123/312 (39%), Gaps = 51/312 (16%) Query: 204 IVESSQDAIISKTLDGNITSWNESAERLFGYTAEEMIGSHXXXXXXXXXXXXXXXXXXXX 263 I+E + + I+ GNI N S E+LFGY+ E+IG Sbjct: 275 IIEYAPEGIMVLDAQGNIILANTSIEKLFGYSQTELIGQ---SIALLGLAELLQQSLHLL 331 Query: 264 RQGQRI--------NTYETQRQRKDGTK--IDVALTISPIRDEHKNVVGASKIVRDITAR 313 ++G+ + +E R DG++ I+V+LT P + + + AS VRDI+AR Sbjct: 332 QEGEDVGPTCPLDQEEFEILGTRYDGSEFPIEVSLTSLPSLSQREMNIFAS--VRDISAR 389 Query: 314 LDVENALRESQYFIEKLANYSPQILYILDPIAWKNIYVNYQSFEILGYTPEEFKNGGTEL 373 + + + + ++ + + +P + I + G T +F N Sbjct: 390 QEAQQQILRQREHLQSVLDSAPVGVAI----------------TVNGIT--QFANPHIGE 431 Query: 374 LLNIVHPDDIPTLYENKNFWQK-----SQEGQVLTTEYRMRHKNGSWRWLRSREVVFARD 428 L+++ D +Y + Q+ +Q G+ + Y+M + G +R F Sbjct: 432 LVDLKVGDSPQKIYVDLGDRQQMLEELTQFGRSQSRVYKMYNPRGE---IRDILATFLAT 488 Query: 429 DYGQVTKVLGTAQDISDSKEQEQRLYEQGRRESLLREITQRIR------QSLDLPTIFNT 482 DY +LG DI+ K E + +R L E RI+ S ++ T N Sbjct: 489 DYEGQKGILGWLADITPIKAAEAEM----KRAKELAEEASRIKADFLANMSHEIRTPMNA 544 Query: 483 VVQEIRQFLEAD 494 V+ L+ D Sbjct: 545 VIGMTHLALKTD 556 >SYNE-PCC-01-000891 sll1353 Length = 998 Score = 45.1 bits (105), Expect = 9e-07 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 1/86 (1%) Query: 129 TELATLNLALNQEIKERQTAEIALQELNNNLEKRVEDRTTQLAKINQQLEQEIEDKTRAK 188 +E+ TLN N+ + Q +++ +NLE RV +RT L IN+QL EIE++ R + Sbjct: 524 SEVITLNENFNEMLITLQNQFKIIKQAKDNLEMRVAERTHTLIVINKQLAGEIEERQRIE 583 Query: 189 EDLEKNKDQLAQLAAIVESSQDAIIS 214 L + K+ A+LA V+S A IS Sbjct: 584 IKLREAKES-AELANRVKSEFLANIS 608 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.320 0.135 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,457 Number of Sequences: 78 Number of extensions: 3882 Number of successful extensions: 129 Number of sequences better than 1.0e-05: 10 Number of HSP's better than 0.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 80 Number of HSP's gapped (non-prelim): 25 length of query: 844 length of database: 48,235 effective HSP length: 70 effective length of query: 774 effective length of database: 42,775 effective search space: 33107850 effective search space used: 33107850 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 97 (42.0 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-002221 slr1213 (241 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-002221 slr1213 474 e-136 SYNE-PCC-01-001306 sll1905 73 1e-15 SYNE-PCC-01-002086 slr1042 67 7e-14 SYNE-PCC-01-000414 sll0649 66 9e-14 SYNE-PCC-01-000242 sll0396 64 3e-13 SYNE-PCC-01-002489 slr1588 63 1e-12 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 61 3e-12 SYNE-PCC-01-001133 sll1673 60 8e-12 SYNE-PCC-01-002033 slr0947 58 3e-11 SYNE-PCC-01-001075 sll1592 57 5e-11 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 56 1e-10 SYNE-PCC-01-002618 slr1760 54 4e-10 SYNE-PCC-01-001160 sll1708 53 8e-10 SYNE-PCC-01-002672 slr1837 52 2e-09 SYNE-PCC-01-001575 slr0312 52 2e-09 SYNE-PCC-01-002788 slr1982 50 5e-09 SYNE-PCC-01-001461 slr0115 50 5e-09 SYNE-PCC-01-000523 sll0797 49 1e-08 SYNE-PCC-01-002731 slr1909 49 1e-08 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 47 6e-08 SYNE-PCC-01-001437 slr0081 47 7e-08 SYNE-PCC-01-000608 sll0921 43 8e-07 HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator pr... 43 1e-06 SYNE-PCC-01-000800 sll1228 42 2e-06 SYNE-PCC-01-002879 slr2104 41 3e-06 SYNE-PCC-01-001132 sll1672 40 5e-06 SYNE-PCC-01-002617 slr1759 40 9e-06 >SYNE-PCC-01-002221 slr1213 Length = 241 Score = 474 bits (1220), Expect = e-136 Identities = 241/241 (100%), Positives = 241/241 (100%) Query: 1 MVTKILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGE 60 MVTKILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGE Sbjct: 1 MVTKILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGE 60 Query: 61 IDGIEVAERIKSLYSIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTVAIAIA 120 IDGIEVAERIKSLYSIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTVAIAIA Sbjct: 61 IDGIEVAERIKSLYSIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTVAIAIA 120 Query: 121 NHQQQRKPEEDTLSTSTGHYRLQPTLDYIEEHLDQGITVEFLAGAIGMSTAYFCRFFQKE 180 NHQQQRKPEEDTLSTSTGHYRLQPTLDYIEEHLDQGITVEFLAGAIGMSTAYFCRFFQKE Sbjct: 121 NHQQQRKPEEDTLSTSTGHYRLQPTLDYIEEHLDQGITVEFLAGAIGMSTAYFCRFFQKE 180 Query: 181 MGCSPYQFIIQQRVERAKAILLERELSISEVALRCGFSSHSQLNHHFRNLLGITPKEYRS 240 MGCSPYQFIIQQRVERAKAILLERELSISEVALRCGFSSHSQLNHHFRNLLGITPKEYRS Sbjct: 181 MGCSPYQFIIQQRVERAKAILLERELSISEVALRCGFSSHSQLNHHFRNLLGITPKEYRS 240 Query: 241 R 241 R Sbjct: 241 R 241 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 72.8 bits (177), Expect = 1e-15 Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 22/186 (11%) Query: 5 ILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEIDGI 64 IL+V+D + I++LL+ +GY + S G AL+++ + PDL+LLD+ + G +DG+ Sbjct: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTS-GPEALQRVTQAQPDLILLDLMMPG-MDGL 77 Query: 65 EVAERIKS---LYSIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTVAIAIAN 121 EV +R+K IP+++LTA ++ + L +A YV KPF +LL+ V + Sbjct: 78 EVCDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVKTHLEL 137 Query: 122 HQ----------QQRKPEEDTLSTSTGHYRLQPTLDYIEEHLDQGITVEFLAGAIGMSTA 171 Q +Q + E TST L + +++ G+ + G I + Sbjct: 138 KQTRDNLHHTLLEQARTAEALACTST-------RLGILVQNMQAGVLMTDAQGTIVVVNP 190 Query: 172 YFCRFF 177 F R F Sbjct: 191 EFARLF 196 Score = 50.8 bits (120), Expect = 4e-09 Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 9/129 (6%) Query: 5 ILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEIDGI 64 IL+ ED + Q LLK GY + V+ ++G AL +A+ D+VL+D+ + E+DG+ Sbjct: 742 ILLAEDNLINQQVAKLLLKKLGYPVDVV-NNGQEALSALAKGDYDVVLMDVEMP-EMDGL 799 Query: 65 EVAERIKSLYSIP----IVYLTAFSDGETLERAQKTNPQGYVIKPFRRE---QLLSTVAI 117 E I+ I+ +TA+S ER + YV KP R E Q L A Sbjct: 800 TATEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKPIRLEALQQALQVAAT 859 Query: 118 AIANHQQQR 126 A+ + Q R Sbjct: 860 ALQSTSQDR 868 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 66.6 bits (161), Expect = 7e-14 Identities = 42/122 (34%), Positives = 69/122 (56%), Gaps = 9/122 (7%) Query: 5 ILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEIDGI 64 +L+VED + I+ +LK G+++ IA DG AL+K+ F PDLV+LDI + ++G Sbjct: 30 VLLVEDSSSQREMISGILKDHGWQV-TIACDGVEALEKLQNFSPDLVVLDI-VMPRMNGY 87 Query: 65 EVAERIKS---LYSIPIVYLTAFSDGETLER--AQKTNPQGYVIKPFRREQLLSTVAIAI 119 EV RIKS ++P++ + S GE +R + Y+ KPF+ +L+ T+ + Sbjct: 88 EVCRRIKSDPKTKNVPVIMCS--SKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLL 145 Query: 120 AN 121 N Sbjct: 146 RN 147 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 66.2 bits (160), Expect = 9e-14 Identities = 41/127 (32%), Positives = 71/127 (55%), Gaps = 5/127 (3%) Query: 5 ILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEIDGI 64 ILIVED++ +AQ I + L+ + + C++ +DG T L+ E PDL++LD+ + ++DG+ Sbjct: 14 ILIVEDDQEIAQLIRETLEREQFT-CIVTNDGETGLRIFQEQVPDLIVLDLMLP-KLDGL 71 Query: 65 EVAERIKSLYSIPIVY-LTAFSDGETLER--AQKTNPQGYVIKPFRREQLLSTVAIAIAN 121 EV RI+ Y L + GE ++R T Y++KPF +L++ V + Sbjct: 72 EVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRALLRR 131 Query: 122 HQQQRKP 128 +Q +P Sbjct: 132 QLRQGQP 138 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 64.3 bits (155), Expect = 3e-13 Identities = 35/120 (29%), Positives = 67/120 (55%), Gaps = 3/120 (2%) Query: 1 MVTKILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGE 60 M ++L+VE+E +A+ + LK +GY++ V A DG + EF PDL++++ + G Sbjct: 1 MSHRVLVVEEEEKLARFMELELKYEGYDVSV-ARDGLKGFTQAQEFPPDLIIVNGALPG- 58 Query: 61 IDGIEVAERIKSLYS-IPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTVAIAI 119 + G+E+ R++ + S IPI+ +TA D E Y++KPF ++ + + + + Sbjct: 59 MSGLELCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQL 118 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 62.8 bits (151), Expect = 1e-12 Identities = 38/119 (31%), Positives = 67/119 (56%), Gaps = 7/119 (5%) Query: 2 VTKILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKI--AEFYPDLVLLDIRIKG 59 ++ IL+VEDE ++ + I + L + Y+I + A +GA AL + E PDL++ D+ + Sbjct: 1 MSTILVVEDEAIIRELIGETLSLENYKI-LEAENGAVALGLLNSLEVMPDLIICDVMMP- 58 Query: 60 EIDG---IEVAERIKSLYSIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTV 115 E+DG I ++ +IP ++LTA + + + Y+IKPF++E LL+ V Sbjct: 59 EMDGHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAV 117 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 61.2 bits (147), Expect = 3e-12 Identities = 46/118 (38%), Positives = 62/118 (52%), Gaps = 6/118 (5%) Query: 1 MVTKILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGE 60 M KILIVEDE + + IA L Y++ + ASD TA+ KI E P L+LLD + G Sbjct: 1 MTRKILIVEDECAIREMIALFLSQKYYDV-IEASDFKTAINKIKE-NPKLILLDWMLPGR 58 Query: 61 IDGIEVAERIK---SLYSIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTV 115 GI+ + IK S +IPI+ LTA S E Y+ KPF + LL+ + Sbjct: 59 -SGIQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARI 115 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 59.7 bits (143), Expect = 8e-12 Identities = 44/144 (30%), Positives = 77/144 (53%), Gaps = 14/144 (9%) Query: 5 ILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEIDGI 64 IL+V+D Q ++ LL + GY + + S G AL+ + PDL+LLDI++ ++DG Sbjct: 11 ILLVDDLPNNLQLLSDLLINLGYTVRSVTS-GKMALRTLQVKRPDLILLDIKMP-DMDGY 68 Query: 65 EVAERIKS---LYSIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTV------ 115 +V E IK L IPI++++A D +A + Y+ KPF+ E++++ + Sbjct: 69 QVCEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQIEEVVARIEGQFTI 128 Query: 116 ---AIAIANHQQQRKPEEDTLSTS 136 IA+ ++R+ E+ L S Sbjct: 129 QRQRIALKREVRKRREAEEVLYQS 152 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 57.8 bits (138), Expect = 3e-11 Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 2/105 (1%) Query: 7 IVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEIDGIEV 66 +V+DE + + + L GYE+ V A+DG A+ E PDLV+LD+ + ++DG V Sbjct: 1 MVDDEASIRRILETRLSMIGYEV-VTAADGEEAIATFHESDPDLVVLDVMMP-KLDGYGV 58 Query: 67 AERIKSLYSIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQL 111 + ++ IPI+ LTA D + YV+KPF ++L Sbjct: 59 CQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKEL 103 >SYNE-PCC-01-001075 sll1592 Length = 226 Score = 57.0 bits (136), Expect = 5e-11 Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 3/114 (2%) Query: 4 KILIVEDERLVAQH-IAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEID 62 +IL+VED+ L + +L + G ++ A DG TA+ + + D+V+LD+ + G I Sbjct: 9 RILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPG-IG 67 Query: 63 GIEVAERIKSLY-SIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTV 115 GIE +IK ++ +P++ LT+ S + R + QGY +K E L+ + Sbjct: 68 GIEACHQIKKIHPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLAI 121 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 55.8 bits (133), Expect = 1e-10 Identities = 55/237 (23%), Positives = 114/237 (48%), Gaps = 32/237 (13%) Query: 2 VTKILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEI 61 ++K+L+V+D+ + + ++ LL+ +G+++ A++G AL+K+ E Y LVLLD+ + ++ Sbjct: 1 MSKLLLVDDDIELTELLSTLLELEGFDV-ETANNGLEALQKLNESYK-LVLLDVMMP-KL 57 Query: 62 DGIEVAERIKSLYSIPIVYLTAFSDGETLER--AQKTNPQGYVIKPFRREQLLSTVAIAI 119 +GIE + I+ + ++P++ LTA GE ++R + + KPF +L++ + + Sbjct: 58 NGIETLKEIRKVSNVPVMMLTA--RGEDIDRVLGLELGADDCLPKPFNDRELIARIKAIL 115 Query: 120 ANHQQQRKPEEDTLSTSTGHYRLQPTLDYIEEHLDQGITVEFLAGAIGMSTAYFCRFFQK 179 ++ P + + +E GIT+ F G + ++ Sbjct: 116 ---RRSASPSNN--------------ISNVEILSFDGITLHFSHG--------IATYNEE 150 Query: 180 EMGCSPYQFIIQQRVERAKAILLERELSISEVALRCGFSSHSQLNHHFRNLLGITPK 236 + + Y+F I + ++K ++ RE EV + L+ H NL PK Sbjct: 151 NLNLTDYEFKILCLLLKSKGNVVSREELSLEVMEKPLTPFDRSLDMHISNLRRKLPK 207 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 54.3 bits (129), Expect = 4e-10 Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 5/129 (3%) Query: 4 KILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEIDG 63 KIL+V+D+ + + L+ +G+ + +A++G AL K AE P++VLLD + +DG Sbjct: 13 KILVVDDDGFMRMQLRVYLQKEGHRV-ELATNGEEALTKFAEIKPEVVLLD-AVMPVMDG 70 Query: 64 IEVAERIKSLYSIP---IVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTVAIAIA 120 + + +Y P ++ +T D +++RA + YV KP L V + Sbjct: 71 FACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLLY 130 Query: 121 NHQQQRKPE 129 ++ Q + E Sbjct: 131 QNRLQHQLE 139 >SYNE-PCC-01-001160 sll1708 Length = 226 Score = 53.1 bits (126), Expect = 8e-10 Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 3/117 (2%) Query: 4 KILIVEDERLVAQHIAQLLKS-DGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEID 62 KILIVED+ L+ + Q L + + +EI +G A+++ A PDL+++DI + G +D Sbjct: 18 KILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPG-LD 76 Query: 63 GIEVAERIKSLY-SIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTVAIA 118 GIE ++IK I IV LT+ + + A + Y +K E+L+ +A A Sbjct: 77 GIEATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIAAA 133 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 51.6 bits (122), Expect = 2e-09 Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 4/133 (3%) Query: 2 VTKILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEI 61 + IL+V+DE + + +++ L G+ I V A G T L DL++LD + ++ Sbjct: 1 MANILLVDDENALTEPLSKALGHQGHTIDV-ADQGKTGLAMAIAGQYDLLILDWMLP-QV 58 Query: 62 DGIEVAERIKSL-YSIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTVAIAIA 120 G+E+ +I+ L +S P+++LTA + Y+IKPF +LL+ V A+ Sbjct: 59 SGLEICRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFELRELLARVR-ALL 117 Query: 121 NHQQQRKPEEDTL 133 Q + +TL Sbjct: 118 RRQSHGETITETL 130 >SYNE-PCC-01-001575 slr0312 Length = 209 Score = 51.6 bits (122), Expect = 2e-09 Identities = 28/114 (24%), Positives = 59/114 (51%), Gaps = 3/114 (2%) Query: 4 KILIVEDERLVAQHIAQLLKSD-GYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEID 62 ++LI +D + Q +A ++ D ++ A +G A+ E PD+ L+D+R+ E++ Sbjct: 8 RVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMP-EVE 66 Query: 63 GIEVAERIKSLYSIP-IVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTV 115 G+ I ++ I+ LT + E + R + +GY++K ++LL+ + Sbjct: 67 GVAAISAICAIVKFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAI 120 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 50.4 bits (119), Expect = 5e-09 Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 5/121 (4%) Query: 2 VTKILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEI 61 + K+L+VED + +++ L GYE+ VIA DG A+ P L+L+D+ + I Sbjct: 4 MAKVLLVEDNEMNRDMLSRRLIRKGYEV-VIAVDGEQAVTMAISESPQLILMDMSLP-II 61 Query: 62 DGIEVAERIKSLYS---IPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTVAIA 118 DG ++IK IPI+ LTA + ERA Y KP ++LL + Sbjct: 62 DGWTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEAL 121 Query: 119 I 119 I Sbjct: 122 I 122 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 50.4 bits (119), Expect = 5e-09 Identities = 31/115 (26%), Positives = 61/115 (53%), Gaps = 5/115 (4%) Query: 4 KILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEIDG 63 +ILI++D+ ++ ++ L+ GY++ A DG + PDL++LD+ + ++DG Sbjct: 3 RILIIDDDPAISDLVSINLEMAGYDVQQ-AVDGIKGQALAVQLQPDLIMLDLMLP-KVDG 60 Query: 64 IEVAERIKS---LYSIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTV 115 V +R++ IP++ LTA + + + Y+ KPF E++L+ V Sbjct: 61 FTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARV 115 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 49.3 bits (116), Expect = 1e-08 Identities = 37/160 (23%), Positives = 81/160 (50%), Gaps = 10/160 (6%) Query: 4 KILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPD--LVLLDIRIKGEI 61 +IL+VEDE + I ++L S+ Y + + +DG+ A + + + L ++D + G + Sbjct: 2 RILLVEDETDLGMAIKKVLVSEKYVVDWV-TDGSQAWDYLENQWTEYTLAIVDWLLPG-L 59 Query: 62 DGIEVAERIKSL-YSIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTVAIAIA 120 G+E+ +++++ S+P++ LTA + E Y+ KPF +LL+ + Sbjct: 60 SGLELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAELLARLRAL-- 117 Query: 121 NHQQQRKPEEDTLSTSTGHYRLQPTLDYIEEHLDQGITVE 160 Q+R P+ + G++ L P+ + + + + + +E Sbjct: 118 ---QRRSPQFQPQILTLGNFSLDPSNNLLSVTISEPLNLE 154 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 48.9 bits (115), Expect = 1e-08 Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 10/173 (5%) Query: 5 ILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEIDGI 64 +L+V+D+ + + L+ GY++ A +G AL + PD+++ DI + E+DG Sbjct: 10 LLLVDDDPNLLLLVKDYLEYQGYQVTT-AGNGREALDLLTTTVPDMIVCDIMMP-EMDGY 67 Query: 65 EVAERIKS---LYSIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTVAIAIAN 121 E+++ + IP+++L+A + Y+ KPF E+L + V + Sbjct: 68 AFIEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQ 127 Query: 122 H----QQQRKPEEDTLSTSTGH-YRLQPTLDYIEEHLDQGITVEFLAGAIGMS 169 Q P ED L PT + + + QG+ +A + +S Sbjct: 128 ADRLLQHNNHPLEDNARVQVARDVELTPTETKVIQLVAQGLANREIADHLKVS 180 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 47.0 bits (110), Expect = 6e-08 Identities = 28/108 (25%), Positives = 57/108 (52%), Gaps = 2/108 (1%) Query: 4 KILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEIDG 63 KIL+VEDE + + + +++GY++ A +G +A +LV++DI + G+ +G Sbjct: 5 KILVVEDEIVTRNTLKGIFEAEGYDV-FEAENGVEMHHILANHNINLVVMDINLPGK-NG 62 Query: 64 IEVAERIKSLYSIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQL 111 + +A ++ S+P+++LT + + Y+ KPF +L Sbjct: 63 LLLARELREELSLPLIFLTGRDNEVDKILGLEIGADDYLTKPFNPREL 110 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 46.6 bits (109), Expect = 7e-08 Identities = 34/120 (28%), Positives = 65/120 (54%), Gaps = 14/120 (11%) Query: 4 KILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYP-------DLVLLDIR 56 +IL+VEDE + + I L+ +GYE+ + DG AL + EF DL++LDI Sbjct: 32 RILVVEDEVSIRETIVLSLQEEGYEVYAV-DDGRDALALLQEFSEDPGQAAVDLIILDIM 90 Query: 57 IKGEIDGIEVAERIK-SLYSIPIVYLTAFSDGETLERAQ--KTNPQGYVIKPFRREQLLS 113 + +++G++V ++ + PI+ ++A G +E+ + Y+ KPF ++L++ Sbjct: 91 LP-QVNGLDVCRSLRFGGDNTPILIVSA--KGSEMEKVTGLEVGADDYITKPFSLKELVA 147 >SYNE-PCC-01-000608 sll0921 Length = 222 Score = 43.1 bits (100), Expect = 8e-07 Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 5/116 (4%) Query: 4 KILIVEDERLVAQHIAQLLKSD-GYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEID 62 +I ++EDE L+ Q + L + +E A++G L + + PD+V++DI + +++ Sbjct: 5 RIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLP-DMN 63 Query: 63 GIEVAERIKS---LYSIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTV 115 GI+V +++K +V LT ET+ A Y +K R E L+ + Sbjct: 64 GIDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAI 119 >HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator protein (narP) Length = 208 Score = 42.7 bits (99), Expect = 1e-06 Identities = 26/114 (22%), Positives = 56/114 (49%), Gaps = 3/114 (2%) Query: 4 KILIVEDERLVAQHIAQLLK-SDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEID 62 K+L+++D L+ + I QL++ D +E+ S G + + PD+++LD+ +KG + Sbjct: 6 KVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKG-LS 64 Query: 63 GIEVAERIKSL-YSIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTV 115 G++ + +++ I+ LT + GY++K + LL + Sbjct: 65 GLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQI 118 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 42.0 bits (97), Expect = 2e-06 Identities = 35/131 (26%), Positives = 68/131 (51%), Gaps = 9/131 (6%) Query: 4 KILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEIDG 63 K+L+V+D + QLL S G+ + A +G A+ ++P ++L+D+++ +DG Sbjct: 419 KVLVVDDRPESRLLLRQLLTSLGF-VVQEAENGEMAIALWESWHPQVILMDMQMP-VLDG 476 Query: 64 IEVAERIKSL----YSIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTVA--I 117 ++IK+ ++I I + +GE E ++ KPFR E+L++ +A + Sbjct: 477 RSTTQKIKASPQGQHTIIIALTASAFEGERAE-ILSAGCDDFLSKPFRPEELIALLAKHL 535 Query: 118 AIANHQQQRKP 128 A+A Q + P Sbjct: 536 AVALPSQGQPP 546 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 41.2 bits (95), Expect = 3e-06 Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 5/126 (3%) Query: 5 ILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEIDGI 64 IL+VED + + LL S G + V A++G AL + D +L+DI++ ++G Sbjct: 720 ILLVEDNEINREFAHDLLTSKGLRVQV-ANNGQEALTLLTSNTYDAILMDIQMP-MLNGY 777 Query: 65 EVAERIKSLY---SIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTVAIAIAN 121 + I+ ++PI+ +TA + E+A ++ KP + + L T+A I Sbjct: 778 DATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLFQTLAHWIPP 837 Query: 122 HQQQRK 127 + + K Sbjct: 838 NSAREK 843 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 40.4 bits (93), Expect = 5e-06 Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 5/117 (4%) Query: 2 VTKILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEI 61 V KIL+V+D+ + Q + +LL G+EI AS+G A+ + P L+ +D+R+ + Sbjct: 629 VYKILVVDDKSVNRQLLIKLLAPFGFEI-EEASNGQEAIALWESWEPHLIFMDMRMP-VM 686 Query: 62 DGIEVAERIKSLY---SIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTV 115 DG E + IK + +V LTA E ++ KPFR + ++ Sbjct: 687 DGYEATKYIKGQVKGNATAVVALTASVLEEEKAIVLSAGCDDFLRKPFRENTIFDSL 743 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 39.7 bits (91), Expect = 9e-06 Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 8/113 (7%) Query: 4 KILIVEDERLVAQHIA-QLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEID 62 +IL+ ED LV Q +A Q+L + GY + IA++G + + + + DLVL+D+++ +D Sbjct: 1191 QILLAEDN-LVNQKVAHQMLNNLGYPVA-IANNGQEVIDALEKKFYDLVLMDMQMP-VMD 1247 Query: 63 GIEVAERIKSLYSIP----IVYLTAFSDGETLERAQKTNPQGYVIKPFRREQL 111 GI I+ + IV +TA + + GY+ KP QL Sbjct: 1248 GITACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQL 1300 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.322 0.138 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,040 Number of Sequences: 78 Number of extensions: 952 Number of successful extensions: 57 Number of sequences better than 1.0e-05: 27 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 26 Number of HSP's that attempted gapping in prelim test: 30 Number of HSP's gapped (non-prelim): 28 length of query: 241 length of database: 48,235 effective HSP length: 60 effective length of query: 181 effective length of database: 43,555 effective search space: 7883455 effective search space used: 7883455 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 91 (39.7 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-002486 slr1584 (234 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-002486 slr1584 463 e-133 SYNE-PCC-01-000518 sll0789 162 7e-43 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 162 7e-43 SYNE-PCC-01-000242 sll0396 159 8e-42 SYNE-PCC-01-000523 sll0797 156 6e-41 SYNE-PCC-01-001461 slr0115 153 4e-40 SYNE-PCC-01-002672 slr1837 146 5e-38 SYNE-PCC-01-001437 slr0081 144 2e-37 SYNE-PCC-01-002033 slr0947 133 4e-34 SYNE-PCC-01-000414 sll0649 125 1e-31 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 113 5e-28 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 108 2e-26 SYNE-PCC-01-000877 sll1330 105 2e-25 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 91 3e-21 SYNE-PCC-01-002635 slr1783 77 4e-17 SYNE-PCC-01-002489 slr1588 71 4e-15 SYNE-PCC-01-002731 slr1909 69 1e-14 SYNE-PCC-01-002873 slr2098 67 4e-14 SYNE-PCC-01-002086 slr1042 67 5e-14 SYNE-PCC-01-001160 sll1708 65 1e-13 SYNE-PCC-01-002617 slr1759 64 4e-13 SYNE-PCC-01-001306 sll1905 62 1e-12 SYNE-PCC-01-002788 slr1982 62 2e-12 SYNE-PCC-01-001133 sll1673 61 3e-12 HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator pr... 60 8e-12 SYNE-PCC-01-002618 slr1760 56 1e-10 SYNE-PCC-01-002879 slr2104 55 2e-10 SYNE-PCC-01-001075 sll1592 52 2e-09 SYNE-PCC-01-000608 sll0921 47 7e-08 SYNE-PCC-01-001575 slr0312 42 2e-06 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 463 bits (1191), Expect = e-133 Identities = 234/234 (100%), Positives = 234/234 (100%) Query: 1 MRILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGI 60 MRILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGI Sbjct: 1 MRILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGI 60 Query: 61 TLCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRRGC 120 TLCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRRGC Sbjct: 61 TLCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRRGC 120 Query: 121 ATCQPVLEWGPIRLDPSTYEVSYDNEVLSLTRKEYSILELLLRNGRRVLSRSMIIDSIWK 180 ATCQPVLEWGPIRLDPSTYEVSYDNEVLSLTRKEYSILELLLRNGRRVLSRSMIIDSIWK Sbjct: 121 ATCQPVLEWGPIRLDPSTYEVSYDNEVLSLTRKEYSILELLLRNGRRVLSRSMIIDSIWK 180 Query: 181 LESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGYRLANLTEKSLCQGKN 234 LESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGYRLANLTEKSLCQGKN Sbjct: 181 LESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGYRLANLTEKSLCQGKN 234 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 162 bits (411), Expect = 7e-43 Identities = 92/223 (41%), Positives = 133/223 (59%), Gaps = 4/223 (1%) Query: 1 MRILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASR--LEYDLVILDVMLPELD 58 MR+LLVED+ L L +AL + Y VD D +LAW Y + + Y L I D M+P L Sbjct: 1 MRLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLS 60 Query: 59 GITLCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRR 118 G+ LCQK R +PILM+TA+D I D++ GLDAGADDY++KP + EL AR+R+L RR Sbjct: 61 GLELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAELLARLRSLQRR 120 Query: 119 GCATCQPVLEWGPIRLDPSTYEVSYDNEV-LSLTRKEYSILELLLRNGRRVLSRSMIIDS 177 L+ G LD T+ V + ++LT KE+ +LE +++ +++LS I + Sbjct: 121 SPELQPQQLQVGQWWLDYGTFAVVTPEQARITLTAKEFQLLEYFMKHPQQILSSEQIKNQ 180 Query: 178 IWKLESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGYR 220 +W L + + V VR LR+KL+ + IETV+G+GYR Sbjct: 181 LWALSAESTSNVVAAQVRLLRRKLEEYS-HGNLIETVYGLGYR 222 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 162 bits (411), Expect = 7e-43 Identities = 89/224 (39%), Positives = 134/224 (59%), Gaps = 5/224 (2%) Query: 1 MRILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGI 60 MRILL+EDD + L L+ + VD TD + YD V+LD+ LP+LDG+ Sbjct: 1 MRILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGL 60 Query: 61 TLCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRRGC 120 + Q+WRS+ +P+L++TARDT+++++ GL +GADDY+ KP L E+ AR++AL+RR Sbjct: 61 EVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRRY 120 Query: 121 ATCQPVLEWGPIRLDPSTYEVSYDNEVLSLTRKEYSILELLLRNGRRVLSRSMIIDSIWK 180 V+E ++LD + V +N+ +SLT +EY +LEL + N RVLSRS I + + Sbjct: 121 GYHHSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSRSSIEEKLSS 180 Query: 181 LESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGYRLANL 224 + + VH+ +LRQK L I TVHG+GY L + Sbjct: 181 WDEEISSGALDVHIYNLRQK-----LGKQFIRTVHGVGYALGQV 219 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 159 bits (402), Expect = 8e-42 Identities = 81/220 (36%), Positives = 136/220 (61%), Gaps = 1/220 (0%) Query: 2 RILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGIT 61 R+L+VE++ LA + L + Y V +A D + A DL+I++ LP + G+ Sbjct: 4 RVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLE 63 Query: 62 LCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRRGCA 121 LC++ R +PI+++TA+D + +++ GLDAGADDY+VKP + E FAR+R LRR Sbjct: 64 LCRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRRTHT 123 Query: 122 TCQPVLEWGPIRLDPSTYEVSYDNEVLSLTRKEYSILELLLRNGRRVLSRSMIIDSIWKL 181 T VL++ +R + ST E+ + ++ LT KE+ +L+ LL + R+VL+R I++ +W Sbjct: 124 TSDEVLQFADLRFNRSTREIQRGDRLIDLTAKEFELLDYLLSHARQVLTREQILERVWGY 183 Query: 182 ESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGYRL 221 + + + ++V++R LR KL++AG I+TV G+GY L Sbjct: 184 DFMGDSNIIEVYIRYLRLKLEAAG-EPRLIQTVRGVGYVL 222 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 156 bits (394), Expect = 6e-41 Identities = 90/230 (39%), Positives = 129/230 (56%), Gaps = 11/230 (4%) Query: 1 MRILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASR--LEYDLVILDVMLPELD 58 MRILLVED+ L + + L + Y VD TD S AWDY EY L I+D +LP L Sbjct: 1 MRILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLS 60 Query: 59 GITLCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRR 118 G+ LCQK R+ +P+LM+TA +++ GLDAGADDY+ KP + EL AR+RAL RR Sbjct: 61 GLELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAELLARLRALQRR 120 Query: 119 GCATCQPVLEWGPIRLDPS--------TYEVSYDNEVLSLTRKEYSILELLLRNGRRVLS 170 +L G LDPS + ++ + + ++LT +E+ I + L++N R++S Sbjct: 121 SPQFQPQILTLGNFSLDPSNNLLSVTISEPLNLERQEIALTVREFQIFQYLMQNPERIIS 180 Query: 171 RSMIIDSIWKLESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGYR 220 S I +W L+ P + V +R +R+KL I+TV G GYR Sbjct: 181 GSKIRQQLWDLDEEPMSNVVAAQMRLIRRKLAQQNCPC-PIKTVPGQGYR 229 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 153 bits (387), Expect = 4e-40 Identities = 89/233 (38%), Positives = 135/233 (57%), Gaps = 7/233 (3%) Query: 2 RILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGIT 61 RIL+++DD +++ ++ L Y V A D A +L+ DL++LD+MLP++DG T Sbjct: 3 RILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFT 62 Query: 62 LCQKWRSHSYL--MPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRRG 119 +CQ+ R +P+LM+TA I DKI G D+GADDY+ KP D+ E+ ARVRALLRR Sbjct: 63 VCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLRRT 122 Query: 120 -----CATCQPVLEWGPIRLDPSTYEVSYDNEVLSLTRKEYSILELLLRNGRRVLSRSMI 174 A +L GP+ L P +E + + + LT E+ +L LL+ + +S S I Sbjct: 123 DRIPQAAKHSEILNQGPLTLVPERFEAIWFGKSIKLTHLEFELLHCLLQRHGQTVSPSDI 182 Query: 175 IDSIWKLESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGYRLANLTEK 227 + +W E + +T++VH+R LR KL+ I+TV+G GY L TE+ Sbjct: 183 LREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIKTVYGAGYCLELSTEE 235 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 146 bits (369), Expect = 5e-38 Identities = 84/227 (37%), Positives = 131/227 (57%), Gaps = 11/227 (4%) Query: 3 ILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGITL 62 ILLV+D+ L E L++AL Q +T+D+A A +YDL+ILD MLP++ G+ + Sbjct: 4 ILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGLEI 63 Query: 63 CQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRRGC-- 120 C++ R + P+L +TA+DT++D++ GLDAG DDY++KP +L EL ARVRALLRR Sbjct: 64 CRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFELRELLARVRALLRRQSHG 123 Query: 121 --------ATCQPVLEWGPIRLDPSTYEVSYDNEVLSLTRKEYSILELLLRNGRRVLSRS 172 A +L + LD + + ++L+ KE ++L L L+ ++LS Sbjct: 124 ETITETLGAVKNNLLSVNNVSLDVANQVAYCQGQRIALSEKEVALLTLFLQAPGQILSHE 183 Query: 173 MIIDSIWKLESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGY 219 I +W ESPP + + VR LR+K++ + I +V+G GY Sbjct: 184 EIYSHLWPGESPPSSNVLAALVRLLRRKIEQPN-APRLINSVYGKGY 229 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 144 bits (364), Expect = 2e-37 Identities = 87/229 (37%), Positives = 137/229 (59%), Gaps = 10/229 (4%) Query: 2 RILLVEDDLPLAETLAEALSDQ---LYTVDIATDA-SLAWDYAS---RLEYDLVILDVML 54 RIL+VED++ + ET+ +L ++ +Y VD DA +L +++ + DL+ILD+ML Sbjct: 32 RILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIML 91 Query: 55 PELDGITLCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRA 114 P+++G+ +C+ R PIL+++A+ + +K+TGL+ GADDY+ KP L EL AR RA Sbjct: 92 PQVNGLDVCRSLRFGGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARCRA 151 Query: 115 LLRR-GCA--TCQPVLEWGPIRLDPSTYEVSYDNEVLSLTRKEYSILELLLRNGRRVLSR 171 ++RR G A P ++ + L P V E +SL KE+ +LEL + RRV SR Sbjct: 152 MIRRQGLAGNNIAPFRKFRDLVLYPQECRVLMRGEEVSLAPKEFRLLELFMSYPRRVWSR 211 Query: 172 SMIIDSIWKLESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGYR 220 +I+ IW ++ + TV VH+R LR+KL+ + + TV G GYR Sbjct: 212 EQLIEHIWGIDFMGDSKTVDVHIRWLREKLEQDPSQPEYLVTVRGFGYR 260 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 133 bits (335), Expect = 4e-34 Identities = 88/230 (38%), Positives = 123/230 (53%), Gaps = 9/230 (3%) Query: 5 LVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGITLCQ 64 +V+D+ + L LS Y V A D A + DLV+LDVM+P+LDG +CQ Sbjct: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 Query: 65 KWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRRGCATCQ 124 + R S + PI+M+TA + D+ITGL+ GADDYVVKP EL AR+R++LRR Sbjct: 61 ELRKESDI-PIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKNGM 119 Query: 125 P------VLEWGPIRLDPSTYEVSYDNEVLSLTRKEYSILELLLRNGRRVLSRSMIIDSI 178 P VL+ IR+D + +V +E + LT E+S+LELL+ SRS I+ + Sbjct: 120 PGIPSSGVLQIATIRIDTNKRQVYKGDERIRLTGMEFSLLELLVSRSGEPFSRSEILQEV 179 Query: 179 WKLESPPEEDT--VKVHVRSLRQKLKSAGLSADAIETVHGIGYRLANLTE 226 W DT V VH+ LR KL+ + + I T G GY + E Sbjct: 180 WGYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGYLFQRILE 229 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 125 bits (314), Expect = 1e-31 Identities = 81/227 (35%), Positives = 122/227 (53%), Gaps = 9/227 (3%) Query: 3 ILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGITL 62 IL+VEDD +A+ + E L + +T + D DL++LD+MLP+LDG+ + Sbjct: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLEV 73 Query: 63 CQKWRSH--SYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRRGC 120 C + R S ILM+TA+ D+I GL GADDY+VKP EL ARVRALLRR Sbjct: 74 CTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRALLRRQL 133 Query: 121 ATCQPV---LEWGPIRLDPSTYEVSY----DNEVLSLTRKEYSILELLLRNGRRVLSRSM 173 QPV ++D ++ S E L LT E+++L + RV +R+ Sbjct: 134 RQGQPVGQIYRTNHFQVDLDQHQASRYQGDRQEELELTGLEFNLLATFMSYPGRVWNRTQ 193 Query: 174 IIDSIWKLESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGYR 220 +I+ +W + +E V H+R LR+K++ + I+TV G+GY+ Sbjct: 194 LIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGYK 240 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 113 bits (283), Expect = 5e-28 Identities = 76/225 (33%), Positives = 126/225 (56%), Gaps = 7/225 (3%) Query: 2 RILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGIT 61 ++LLV+DD+ L E L+ L + + V+ A + A + Y LV+LDVM+P+L+GI Sbjct: 3 KLLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKLNE-SYKLVLLDVMMPKLNGIE 61 Query: 62 LCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRRGCA 121 ++ R S + P++M+TAR D++ GL+ GADD + KP + EL AR++A+LRR + Sbjct: 62 TLKEIRKVSNV-PVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRRSAS 120 Query: 122 TCQ-----PVLEWGPIRLDPSTYEVSYDNEVLSLTRKEYSILELLLRNGRRVLSRSMIID 176 +L + I L S +Y+ E L+LT E+ IL LLL++ V+SR + Sbjct: 121 PSNNISNVEILSFDGITLHFSHGIATYNEENLNLTDYEFKILCLLLKSKGNVVSREELSL 180 Query: 177 SIWKLESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGYRL 221 + + P + ++ +H+ +LR+KL +T+ G GY L Sbjct: 181 EVMEKPLTPFDRSLDMHISNLRRKLPKRKNKPSWFKTLRGKGYAL 225 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 108 bits (270), Expect = 2e-26 Identities = 72/224 (32%), Positives = 117/224 (52%), Gaps = 4/224 (1%) Query: 2 RILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGIT 61 +IL+VED+ + E +A LS + Y V A+D A + L++LD MLP GI Sbjct: 4 KILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKE-NPKLILLDWMLPGRSGIQ 62 Query: 62 LCQ--KWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRRG 119 Q K + +PI+M+TA+ T D I L+AGADDY+ KP L AR+ A+ RR Sbjct: 63 FIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWRRI 122 Query: 120 CATCQPVLEWGPIRLDPSTYEVSYDNEVLSLTRKEYSILELLLRNGRRVLSRSMIIDSIW 179 ++ + +D + V + + ++L+ E+ +L +R+ +V SR +++ IW Sbjct: 123 YEQQSQFIQIDELSIDENAQRVFFQQQEINLSSTEFKLLHFFMRHPEKVYSREQLLNRIW 182 Query: 180 KLESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGYRLAN 223 + E TV ++R LR+ L + I+TV G GYR ++ Sbjct: 183 HNDLEVEYRTVDSYIRRLRRNL-APFQCEHYIQTVRGSGYRFSS 225 >SYNE-PCC-01-000877 sll1330 Length = 250 Score = 105 bits (261), Expect = 2e-25 Identities = 64/190 (33%), Positives = 103/190 (54%), Gaps = 5/190 (2%) Query: 47 LVILDVMLPELDGITLCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLG 106 L ++D L + DGI LC +W + I +++A+DT D + GL AGADDY+ KP + Sbjct: 50 LAVIDSDLTDGDGIELC-RWLYQQHQSMIFILSAKDTEKDIVHGLKAGADDYLTKPFGMQ 108 Query: 107 ELFARVRALLRRGCATCQP-VLEWGPIRLDPSTYEVSYDNEVLSLTRKEYSILELLLRNG 165 E AR+ L+RR P +L++G +++D V Y + LT +E+S+L +L + Sbjct: 109 EFLARIECLIRRVRTVAAPLLLDYGVLKIDLVQRRVEYQGNFVDLTPQEFSLLYVLTQAE 168 Query: 166 RRVLSRSMIIDSIWKLESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGYRLAN-- 223 LSR+ ++ W E+ T+ HV SLR+K+++ I+TV +GYR + Sbjct: 169 GSALSRTELLRRAWP-EAIDNPRTIDTHVLSLRKKIETDPRQPSLIQTVRNVGYRFNSSI 227 Query: 224 LTEKSLCQGK 233 L EK + K Sbjct: 228 LEEKKVVAEK 237 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 90.9 bits (224), Expect = 3e-21 Identities = 64/227 (28%), Positives = 112/227 (49%), Gaps = 9/227 (3%) Query: 2 RILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGIT 61 +IL+VED++ TL + Y V A + + +LV++D+ LP +G+ Sbjct: 5 KILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGLL 64 Query: 62 LCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRRGCA 121 L ++ R L P++ +T RD DKI GL+ GADDY+ KP + EL R R LL R Sbjct: 65 LARELREELSL-PLIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHRAMP 123 Query: 122 TCQPVLEWG-------PIRLDPSTYE-VSYDNEVLSLTRKEYSILELLLRNGRRVLSRSM 173 + +G +LD +++ ++ + + L R E+ + N ++ +R Sbjct: 124 HQEKENTFGREFYRFNGWKLDLNSHSLITPEGQEFKLPRSEFRAMLHFCENPGKLQTREE 183 Query: 174 IIDSIWKLESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGYR 220 ++ + E P++ TV V +R +R+ + + + I T+HG GYR Sbjct: 184 LLKKMTGRELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGYR 230 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 77.4 bits (189), Expect = 4e-17 Identities = 46/119 (38%), Positives = 68/119 (57%), Gaps = 3/119 (2%) Query: 3 ILLVEDDLPLAETLAEALSDQL-YTVDIATDASLAWDYASRLEYDLVILDVMLPELDGIT 61 +LLV+D+ + E++ L D + VD+A +A+ AWDY LVI D+M+P++DG Sbjct: 58 LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGYQ 117 Query: 62 LCQKWRSHSYL--MPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRR 118 QK R + +P++ +TAR D+I G G D ++ KP D EL A VR LL R Sbjct: 118 FLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLAR 176 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 70.9 bits (172), Expect = 4e-15 Identities = 44/121 (36%), Positives = 72/121 (59%), Gaps = 6/121 (4%) Query: 3 ILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEY--DLVILDVMLPELDG- 59 IL+VED+ + E + E LS + Y + A + ++A + LE DL+I DVM+PE+DG Sbjct: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 Query: 60 --ITLCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLR 117 IT QK + + +P + +TA T+ D G+++GADDY++KP +L V + L+ Sbjct: 64 GLITALQK-NAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSRLQ 122 Query: 118 R 118 + Sbjct: 123 K 123 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 68.9 bits (167), Expect = 1e-14 Identities = 55/200 (27%), Positives = 103/200 (51%), Gaps = 17/200 (8%) Query: 3 ILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGITL 62 +LLV+DD L + + L Q Y V A + A D + D+++ D+M+PE+DG Sbjct: 10 LLLVDDDPNLLLLVKDYLEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAF 69 Query: 63 CQKWRSHSYL--MPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRRGC 120 ++ R + + +P++ ++A+ ++++ GL+ GAD Y+ KP + EL A+V++ LR+ Sbjct: 70 IEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQAD 129 Query: 121 ATCQPVLEWGPIRLDPSTYEVSYDNEVLSLTRKEYSILELLLRNGRRVLSRSMIIDSIWK 180 Q P+ D + +V+ D E LT E +++L+ + L+ I D + Sbjct: 130 RLLQH--NNHPLE-DNARVQVARDVE---LTPTETKVIQLVAQG----LANREIADHL-- 177 Query: 181 LESPPEEDTVKVHVRSLRQK 200 + TV+ HV ++ K Sbjct: 178 ---KVSQRTVESHVSNMLNK 194 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 67.4 bits (163), Expect = 4e-14 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 18/148 (12%) Query: 2 RILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGI- 60 RILLVED+ E AE L D + VD+A + +A + + Y LV++D+ +PE+DGI Sbjct: 926 RILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIE 985 Query: 61 -TLCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRRG 119 T+ + +PI+ MTA D+ L AG +D++ KP++ EL+ + Sbjct: 986 ATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEELWNK-------- 1037 Query: 120 CATCQPVLEWGPI--RLDPSTYEVSYDN 145 +L W P+ L P T E S N Sbjct: 1038 ------LLHWIPVDSPLAPETIEESAIN 1059 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 67.0 bits (162), Expect = 5e-14 Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 2/117 (1%) Query: 3 ILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGITL 62 +LLVED E ++ L D + V IA D A + DLV+LD+++P ++G + Sbjct: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 Query: 63 CQKWRS--HSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLR 117 C++ +S + +P++M +++ D+ G+ GAD Y+ KP EL ++ LLR Sbjct: 90 CRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLLR 146 >SYNE-PCC-01-001160 sll1708 Length = 226 Score = 65.5 bits (158), Expect = 1e-13 Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 35/214 (16%) Query: 1 MRILLVEDDLPLAETLAEALS--DQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELD 58 M+IL+VEDD + L +AL ++ + + A A+ L DL+++D+ LP LD Sbjct: 17 MKILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPGLD 76 Query: 59 GITLCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRR 118 GI ++ + S + I+++T+ N+ I L +GAD Y VK L L + A Sbjct: 77 GIEATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIAA---- 132 Query: 119 GCATCQPVLEWGPIRLDPSTYEVSYDN----------EVLSLTRKEYSILELLLR-NGRR 167 + G LDP V +N +V SL+ +E +L+L++ + Sbjct: 133 --------AQDGATYLDPQIARVVVENLKPPVPEGQADVSSLSEREIDVLKLIVEGKSNQ 184 Query: 168 VLSRSMIIDSIWKLESPPEEDTVKVHVRSLRQKL 201 +++++ + + +T+K HVR + KL Sbjct: 185 EIAQTLYLST----------NTIKTHVRGIMNKL 208 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 63.9 bits (154), Expect = 4e-13 Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 3/111 (2%) Query: 1 MRILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGI 60 ++ILL ED+L + + L++ Y V IA + D + YDLV++D+ +P +DGI Sbjct: 1190 LQILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGI 1249 Query: 61 TLCQKWRSHSYL---MPILMMTARDTINDKITGLDAGADDYVVKPVDLGEL 108 T C+ R L I+ MTA D+ LDAG D Y+ KP+ + +L Sbjct: 1250 TACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQL 1300 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 62.4 bits (150), Expect = 1e-12 Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 2/116 (1%) Query: 3 ILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGITL 62 IL+V+D ++E L + Y+ T A ++ + DL++LD+M+P +DG+ + Sbjct: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQPDLILLDLMMPGMDGLEV 79 Query: 63 CQKWRSHSYL--MPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALL 116 C + + +P++ +TA + D + GA DYV KP EL ARV+ L Sbjct: 80 CDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVKTHL 135 Score = 55.5 bits (132), Expect = 2e-10 Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 5/112 (4%) Query: 1 MRILLVEDDLPLAETLAEALSDQL-YTVDIATDASLAWDYASRLEYDLVILDVMLPELDG 59 + ILL ED+L + + +A+ L +L Y VD+ + A ++ +YD+V++DV +PE+DG Sbjct: 740 LTILLAEDNL-INQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDG 798 Query: 60 ITLCQKWR---SHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGEL 108 +T + R S I+ +TA D+ L +G +DYV KP+ L L Sbjct: 799 LTATEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKPIRLEAL 850 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 62.0 bits (149), Expect = 2e-12 Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 2/117 (1%) Query: 2 RILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGIT 61 ++LLVED+ + L+ L + Y V IA D A A L+++D+ LP +DG T Sbjct: 6 KVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGWT 65 Query: 62 LCQKWRSH--SYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALL 116 ++ + H +PI+ +TA +D+ + AG DDY KP+++ L ++ AL+ Sbjct: 66 ATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEALI 122 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 61.2 bits (147), Expect = 3e-12 Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 3/112 (2%) Query: 4 LLVEDDLPL-AETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGITL 62 +L+ DDLP + L++ L + YTV T +A DL++LD+ +P++DG + Sbjct: 11 ILLVDDLPNNLQLLSDLLINLGYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQV 70 Query: 63 CQKWRSHSYL--MPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARV 112 C+ + L +PI+ ++A DK+ + G DY+ KP + E+ AR+ Sbjct: 71 CEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQIEEVVARI 122 >HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator protein (narP) Length = 208 Score = 59.7 bits (143), Expect = 8e-12 Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 20/204 (9%) Query: 1 MRILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWD---YASRLEYDLVILDVMLPEL 57 +++LL+ DD PL + L + ++ D S + A + D++ILD+ + L Sbjct: 5 LKVLLI-DDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGL 63 Query: 58 DGITLCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLR 117 G+ + R+ IL++T D ND T +DAGAD Y++K + L +++ + + Sbjct: 64 SGLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRIAQ 123 Query: 118 RGCATCQPVLEWGPIRLDPSTYEVSYDNEVLSLTRKEYSILELLLRNGRRVLSRSMIIDS 177 + L T+E DN + SLT +E +L + LS I Sbjct: 124 GEVILSDSIKN----LLLERTHE---DNPLDSLTDREMGVLRQIATG----LSNKQIAAQ 172 Query: 178 IWKLESPPEEDTVKVHVRSLRQKL 201 ++ E+TVKVH+R+L +KL Sbjct: 173 LF-----ISEETVKVHIRNLLRKL 191 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 55.8 bits (133), Expect = 1e-10 Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 6/119 (5%) Query: 2 RILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGIT 61 +IL+V+DD + L L + + V++AT+ A + ++ ++V+LD ++P +DG Sbjct: 13 KILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGFA 72 Query: 62 LCQK----WRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALL 116 CQ +++ S L +LM+T D +AGA DYV KP+ L RV+ LL Sbjct: 73 CCQALMKIYQNPSPL--VLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLL 129 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 55.1 bits (131), Expect = 2e-10 Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 2/109 (1%) Query: 3 ILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGITL 62 ILLVED+ E + L+ + V +A + A + YD +++D+ +P L+G Sbjct: 720 ILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYDA 779 Query: 63 CQKWRSHSY--LMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELF 109 + R Y +PI+ MTA D+ LDAG +D++ KP+ LF Sbjct: 780 TRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLF 828 >SYNE-PCC-01-001075 sll1592 Length = 226 Score = 51.6 bits (122), Expect = 2e-09 Identities = 59/216 (27%), Positives = 91/216 (42%), Gaps = 30/216 (13%) Query: 1 MRILLVEDDLPLAETLAEALSDQ--LYTVDIATDASLAWDYASRLEYDLVILDVMLPELD 58 +RILLVEDD L LS + L A D A Y ++ +D+VILDV LP + Sbjct: 8 IRILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPGIG 67 Query: 59 GITLCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRR 118 GI C + + +P+L++T+ ++A A Y VK V L +R++ Sbjct: 68 GIEACHQIKKIHPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLAIRSV--- 124 Query: 119 GCATCQPVLEWGPI---RLDPSTYEVSYDNEVL---------SLTRKEYSILELLLRNGR 166 W I + + S VL LT++E IL L+ + Sbjct: 125 ----AAGAFWWDAIASQEIQTAFQHSSSTGAVLPLADADGENPLTKRELEILSLVAKG-- 178 Query: 167 RVLSRSMIIDSIWKLESPPEEDTVKVHVRSLRQKLK 202 S I D ++ TV+VHV ++ +KL+ Sbjct: 179 --KSNQEIADELYIAPG-----TVRVHVHTILRKLE 207 >SYNE-PCC-01-000608 sll0921 Length = 222 Score = 46.6 bits (109), Expect = 7e-08 Identities = 53/223 (23%), Positives = 97/223 (43%), Gaps = 19/223 (8%) Query: 1 MRILLVEDDLPLAETLAEALSDQ--LYTVDIATDASLAWDYASRLEYDLVILDVMLPELD 58 +RI L+ED+ + + L +AL+ + V A + L + D+VI+D+ LP+++ Sbjct: 4 IRIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMN 63 Query: 59 GITLCQKWRSH--SYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALL 116 GI + Q+ + + ++++T D + AGAD Y +K L ++A Sbjct: 64 GIDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQA-T 122 Query: 117 RRGCATCQP-----VLEWGPIRLDPSTYEVSYDNEVLSLTRKEYSILELLLRNGRRVLSR 171 G A P VL P S + LT +E +L+L++ S Sbjct: 123 HGGFAWIDPAIARIVLAHAPGAEPSEPSSPSRTSLSYGLTERELEVLQLIVDG----CSN 178 Query: 172 SMIIDSIWKLESPPEEDTVKVHVRSLRQKLKSAGLSADAIETV 214 + I + ++ TVK HVR++ KL + + A+ + Sbjct: 179 ADIAEKLYITVG-----TVKTHVRNILNKLCANDRTQAAVRAI 216 >SYNE-PCC-01-001575 slr0312 Length = 209 Score = 42.0 bits (97), Expect = 2e-06 Identities = 27/119 (22%), Positives = 56/119 (47%), Gaps = 2/119 (1%) Query: 1 MRILLVEDDLPLAETLAEALS--DQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELD 58 +R+L+ +D + LA ++ + + A + A + D+ ++D+ +PE++ Sbjct: 7 IRVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPEVE 66 Query: 59 GITLCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLR 117 G+ + I+++T D+ D GL AGA Y++K + EL +R + R Sbjct: 67 GVAAISAICAIVKFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHR 125 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.320 0.137 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,671 Number of Sequences: 78 Number of extensions: 811 Number of successful extensions: 81 Number of sequences better than 1.0e-05: 30 Number of HSP's better than 0.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 14 Number of HSP's gapped (non-prelim): 33 length of query: 234 length of database: 48,235 effective HSP length: 60 effective length of query: 174 effective length of database: 43,555 effective search space: 7578570 effective search space used: 7578570 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 91 (39.7 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-002489 slr1588 (421 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-002489 slr1588 816 0.0 SYNE-PCC-01-000542 sll0821 176 1e-46 SYNE-PCC-01-002731 slr1909 96 3e-22 SYNE-PCC-01-001461 slr0115 96 3e-22 SYNE-PCC-01-002033 slr0947 89 3e-20 SYNE-PCC-01-000414 sll0649 82 2e-18 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 82 4e-18 SYNE-PCC-01-002635 slr1783 74 1e-15 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 73 1e-15 SYNE-PCC-01-001437 slr0081 73 2e-15 SYNE-PCC-01-001306 sll1905 73 2e-15 SYNE-PCC-01-002086 slr1042 72 2e-15 SYNE-PCC-01-002672 slr1837 71 7e-15 SYNE-PCC-01-002486 slr1584 71 7e-15 SYNE-PCC-01-001575 slr0312 67 8e-14 SYNE-PCC-01-001133 sll1673 67 8e-14 SYNE-PCC-01-002873 slr2098 66 2e-13 SYNE-PCC-01-001132 sll1672 66 2e-13 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 64 7e-13 SYNE-PCC-01-000518 sll0789 64 9e-13 SYNE-PCC-01-002221 slr1213 63 2e-12 SYNE-PCC-01-000242 sll0396 63 2e-12 SYNE-PCC-01-002879 slr2104 62 3e-12 SYNE-PCC-01-000800 sll1228 60 1e-11 SYNE-PCC-01-000523 sll0797 59 2e-11 SYNE-PCC-01-002788 slr1982 59 4e-11 HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator pr... 57 1e-10 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 56 2e-10 SYNE-PCC-01-002618 slr1760 55 3e-10 SYNE-PCC-01-000608 sll0921 54 9e-10 SYNE-PCC-01-002778 slr1969 46 2e-07 SYNE-PCC-01-000877 sll1330 44 9e-07 SYNE-PCC-01-002617 slr1759 42 5e-06 SYNE-PCC-01-001160 sll1708 42 5e-06 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 816 bits (2107), Expect = 0.0 Identities = 410/421 (97%), Positives = 410/421 (97%) Query: 1 MSTILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEM 60 MSTILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEM Sbjct: 1 MSTILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEM 60 Query: 61 DGHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSR 120 DGHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSR Sbjct: 61 DGHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSR 120 Query: 121 LQKQAKLSAFYQGSISSSLTERPRRSGTIGTPTLTPDEAEIWRDLEVGLNTGQVFLFYQP 180 LQKQAKLSAFYQGSISSSLTERPRRSGTIGTPTLTPDEAEIWRDLEVGLNTGQVFLFYQP Sbjct: 121 LQKQAKLSAFYQGSISSSLTERPRRSGTIGTPTLTPDEAEIWRDLEVGLNTGQVFLFYQP 180 Query: 181 KVSIHNHCLAGCEALIRWHHPRKGFVSPGLFIPIAEKTGFISVVGEWVIETVLRQCQQWQ 240 KVSIHNHCLAGCEALIRWHHPRKGFVSPGLFIPIAEKTGFISVVGEWVIETVLRQCQQWQ Sbjct: 181 KVSIHNHCLAGCEALIRWHHPRKGFVSPGLFIPIAEKTGFISVVGEWVIETVLRQCQQWQ 240 Query: 241 YQGLDPIQVAINISARQFHGEDLICILRLGTHKYDVSPQQXXXXXXXXXXXKNVQDSIKQ 300 YQGLDPIQVAINISARQFHGEDLICILRLGTHKYDVSPQQ KNVQDSIKQ Sbjct: 241 YQGLDPIQVAINISARQFHGEDLICILRLGTHKYDVSPQQLEVELTETLLVKNVQDSIKQ 300 Query: 301 LNELRAEGFSVAIDDFGTGYSSLSYLQQFPFDVLKIDQSFVRHIDKNAKNKTITASIINL 360 LNELRAEGFSVAIDDFGTGYSSLSYLQQFPFDVLKIDQSFVRHIDKNAKNKTITASIINL Sbjct: 301 LNELRAEGFSVAIDDFGTGYSSLSYLQQFPFDVLKIDQSFVRHIDKNAKNKTITASIINL 360 Query: 361 AHELELRVTAEGVETWAEYDTIAHMGCDELQGYLFSRPLPVADFTELLSRGTDVPILPLR 420 AHELELRVTAEGVETWAEYDTIAHMGCDELQGYLFSRPLPVADFTELLSRGTDVPILPLR Sbjct: 361 AHELELRVTAEGVETWAEYDTIAHMGCDELQGYLFSRPLPVADFTELLSRGTDVPILPLR 420 Query: 421 R 421 R Sbjct: 421 R 421 >SYNE-PCC-01-000542 sll0821 Length = 1276 Score = 176 bits (446), Expect = 1e-46 Identities = 98/249 (39%), Positives = 142/249 (57%), Gaps = 10/249 (4%) Query: 157 DEAEIWRDLEVGLNTGQVFLFYQPKVSIHNHCLAGCEALIRWHHPRKGFVSPGLFIPIAE 216 D + DL L + L++QP+V++ L G EAL+RW HPR G V+P +FIP+AE Sbjct: 606 DRLTLESDLRQALTNQEFVLYFQPQVALDTGKLLGVEALVRWQHPRLGQVAPDVFIPLAE 665 Query: 217 KTGFISVVGEWVIETVLRQCQQWQYQGLDPIQVAINISARQFHGED-----LICILRLGT 271 + G I+ +G+WV+ET Q + + +++A+NISARQF E L C+ R G Sbjct: 666 ELGLINHLGQWVLETACATHQHFFRETGRRLRMAVNISARQFQDEKWLNSVLECLKRTG- 724 Query: 272 HKYDVSPQQXXXXXXXXXXXKNVQDSIKQLNELRAEGFSVAIDDFGTGYSSLSYLQQFPF 331 + P+ ++++ ++ L+ LR EG VAIDDFGTGYSSLS L+Q P Sbjct: 725 ----MPPEDLELEITESLMMEDIKGTVVLLHRLREEGVQVAIDDFGTGYSSLSILKQLPI 780 Query: 332 DVLKIDQSFVRHIDKNAKNKTITASIINLAHELELRVTAEGVETWAEYDTIAHMGCDELQ 391 LKID+SFV + + I +I+LA+ L L AEG+E+ A+ + MGC Q Sbjct: 781 HRLKIDKSFVNDLLNEGADTAIIQYVIDLANGLNLETVAEGIESEAQLQRLQKMGCHLGQ 840 Query: 392 GYLFSRPLP 400 GY +RPLP Sbjct: 841 GYFLTRPLP 849 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 95.5 bits (236), Expect = 3e-22 Identities = 56/171 (32%), Positives = 95/171 (55%), Gaps = 7/171 (4%) Query: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 +L+V+D+ + L+ + L + Y++ A NG AL LL + +PD+I+CD+MMPEMDG+ Sbjct: 10 LLLVDDDPNLLLLVKDYLEYQGYQVTTAGNGREALDLLTT--TVPDMIVCDIMMPEMDGY 67 Query: 64 GLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSRLQK 123 I +++N + IP +FL+A G + KG+N GAD Y+ KPF+ E+L V S L++ Sbjct: 68 AFIEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQ 127 Query: 124 QAKLSAFYQGSISSSLTERPRRSGTIGTPTLTPDEAEIWRDLEVGLNTGQV 174 +L + + + R LTP E ++ + + GL ++ Sbjct: 128 ADRLLQHNNHPLEDNARVQVARD-----VELTPTETKVIQLVAQGLANREI 173 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 95.5 bits (236), Expect = 3e-22 Identities = 56/163 (34%), Positives = 95/163 (58%), Gaps = 13/163 (7%) Query: 1 MSTILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEM 60 M IL+++D+ I +L+ L + Y + +A +G L ++++ PDLI+ D+M+P++ Sbjct: 1 MPRILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQAL--AVQLQPDLIMLDLMLPKV 58 Query: 61 DGHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSR 120 DG + L+++ +TA IP + LTALG +QD +G +SGADDYL KPF E++L V + Sbjct: 59 DGFTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRAL 118 Query: 121 LQKQAKLSAFYQGSISSSLTERPRRSGTIGTPTLTPDEAE-IW 162 L++ ++ Q + S + + G TL P+ E IW Sbjct: 119 LRRTDRIP---QAAKHSEILNQ-------GPLTLVPERFEAIW 151 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 88.6 bits (218), Expect = 3e-20 Identities = 47/121 (38%), Positives = 76/121 (62%), Gaps = 5/121 (4%) Query: 6 VVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGHGL 65 +V+DEA IR ++ LS+ Y+++ A +G A+ + + PDL++ DVMMP++DG+G+ Sbjct: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESD--PDLVVLDVMMPKLDGYGV 58 Query: 66 ITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSRLQKQA 125 L+K + IP I LTALG + D G+ GADDY++KPF ++L + S L++ Sbjct: 59 CQELRKESD---IPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVD 115 Query: 126 K 126 K Sbjct: 116 K 116 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 82.4 bits (202), Expect = 2e-18 Identities = 45/126 (35%), Positives = 74/126 (58%), Gaps = 2/126 (1%) Query: 1 MSTILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEM 60 M IL+VED+ I +LI ETL E + + +G L + E +PDLI+ D+M+P++ Sbjct: 11 MPNILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQ--EQVPDLIVLDLMLPKL 68 Query: 61 DGHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSR 120 DG + T +++ + + LTA G D G+++GADDYL+KPF +L+ V + Sbjct: 69 DGLEVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRAL 128 Query: 121 LQKQAK 126 L++Q + Sbjct: 129 LRRQLR 134 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 81.6 bits (200), Expect = 4e-18 Identities = 47/116 (40%), Positives = 67/116 (57%), Gaps = 3/116 (2%) Query: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 IL+VEDE IRE+I LS + Y ++EA + A+ N ++ P LI+ D M+P G Sbjct: 5 ILIVEDECAIREMIALFLSQKYYDVIEASDFKTAI---NKIKENPKLILLDWMLPGRSGI 61 Query: 64 GLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNS 119 I ++K AAIP I LTA T +D +N+GADDY+ KPF + LL + + Sbjct: 62 QFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEA 117 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 73.6 bits (179), Expect = 1e-15 Identities = 60/200 (30%), Positives = 99/200 (49%), Gaps = 21/200 (10%) Query: 3 TILVVEDEAIIRELIGETLSLE-NYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMD 61 ++L+V+DE +RE + L ++K+ A N A L +P L+I D+MMP++D Sbjct: 57 SLLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQ--HHLPALVISDIMMPQVD 114 Query: 62 GHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSRL 121 G+ + L+++A+ ++P +FLTA G D +G +G D +L KPF ++L V + L Sbjct: 115 GYQFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLL 174 Query: 122 QKQ----------AKLSAFYQGSISSSLTERPRRSGTIGTPT-----LTPDEAEIWRDLE 166 +Q AKL YQ I + + + SG TP+ TP E + + Sbjct: 175 ARQQASSDAGSESAKLQEIYQ-EIRALKEQIGQPSGIHTTPSPIKLDFTPREQSVLDLVS 233 Query: 167 VGLNTGQVFLFYQPKVSIHN 186 GL ++ Q K S+ N Sbjct: 234 QGLMNKEIAA--QLKTSVRN 251 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 73.2 bits (178), Expect = 1e-15 Identities = 46/128 (35%), Positives = 71/128 (55%), Gaps = 6/128 (4%) Query: 1 MSTILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEM 60 MS +L+V+D+ + EL+ L LE + + A NG AL LN L++ DVMMP++ Sbjct: 1 MSKLLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKLNESY---KLVLLDVMMPKL 57 Query: 61 DGHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSR 120 +G I L++ K + +P + LTA G D G+ GADD L KPF +L+ + + Sbjct: 58 NG---IETLKEIRKVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAI 114 Query: 121 LQKQAKLS 128 L++ A S Sbjct: 115 LRRSASPS 122 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 72.8 bits (177), Expect = 2e-15 Identities = 43/126 (34%), Positives = 70/126 (55%), Gaps = 7/126 (5%) Query: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMP-----DLIICDVMMP 58 ILVVEDE IRE I +L E Y++ ++G AL LL P DLII D+M+P Sbjct: 33 ILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIMLP 92 Query: 59 EMDGHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVN 118 +++G + +L+ P + ++A G+ + G+ GADDY+ KPF ++L+ Sbjct: 93 QVNGLDVCRSLRFGGDNT--PILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARCR 150 Query: 119 SRLQKQ 124 + +++Q Sbjct: 151 AMIRRQ 156 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 72.8 bits (177), Expect = 2e-15 Identities = 46/119 (38%), Positives = 63/119 (52%), Gaps = 2/119 (1%) Query: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 ILVV+D +I E L E Y +G AL + + PDLI+ D+MMP MDG Sbjct: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVT--QAQPDLILLDLMMPGMDGL 77 Query: 64 GLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSRLQ 122 + L+++ +T IP IFLTA QD + GA DY+ KPF +LL V + L+ Sbjct: 78 EVCDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVKTHLE 136 Score = 50.1 bits (118), Expect = 1e-08 Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 3/116 (2%) Query: 3 TILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDG 62 TIL+ ED I +++ L Y + NG AL L + D+++ DV MPEMDG Sbjct: 741 TILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDY--DVVLMDVEMPEMDG 798 Query: 63 HGLITALQKNAKTAAIPFIF-LTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAV 117 ++++ + P+I +TA D + + SG +DY+ KP + E L A+ Sbjct: 799 LTATEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKPIRLEALQQAL 854 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 72.4 bits (176), Expect = 2e-15 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 2/122 (1%) Query: 1 MSTILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEM 60 M+ +L+VED + RE+I L +++ A +G AL L + PDL++ D++MP M Sbjct: 27 MNAVLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFS--PDLVVLDIVMPRM 84 Query: 61 DGHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSR 120 +G+ + ++ + KT +P I ++ G D GM GAD Y+ KPF+ +L+ + Sbjct: 85 NGYEVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQL 144 Query: 121 LQ 122 L+ Sbjct: 145 LR 146 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 70.9 bits (172), Expect = 7e-15 Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 4/125 (3%) Query: 1 MSTILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEM 60 M+ IL+V+DE + E + + L + + I A+ G GL ++ DL+I D M+P++ Sbjct: 1 MANILLVDDENALTEPLSKALGHQGHTIDVADQGKT--GLAMAIAGQYDLLILDWMLPQV 58 Query: 61 DGHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSR 120 G L Q + P +FLTA T+ D G+++G DDYLIKPF+ +LL V + Sbjct: 59 SG--LEICRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFELRELLARVRAL 116 Query: 121 LQKQA 125 L++Q+ Sbjct: 117 LRRQS 121 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 70.9 bits (172), Expect = 7e-15 Identities = 44/121 (36%), Positives = 72/121 (59%), Gaps = 6/121 (4%) Query: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 IL+VED+ + E + E LS + Y + A + ++A + LE DL+I DVM+PE+DG Sbjct: 3 ILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEY--DLVILDVMLPELDG- 59 Query: 64 GLITALQK-NAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSRLQ 122 IT QK + + +P + +TA T+ D G+++GADDY++KP +L V + L+ Sbjct: 60 --ITLCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLR 117 Query: 123 K 123 + Sbjct: 118 R 118 >SYNE-PCC-01-001575 slr0312 Length = 209 Score = 67.4 bits (163), Expect = 8e-14 Identities = 48/173 (27%), Positives = 87/173 (50%), Gaps = 16/173 (9%) Query: 4 ILVVEDEAIIRELIGETLSLEN--YKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMD 61 +L+ +D AI R+ + ++ + I +AENG A+ L E PD+ + D+ MPE++ Sbjct: 9 VLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFE--EHQPDVTLMDLRMPEVE 66 Query: 62 GHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSRL 121 G I+A+ K A I I LT + +D +G+ +GA YL+K + ++LLNA+ + Sbjct: 67 GVAAISAICAIVKFARI--IVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVH 124 Query: 122 QKQAKLSAFYQGSISSSLTERPRRSGTIGTPTLTPDEAEIWRDLEVGLNTGQV 174 + Q + + + L +R + P L+ E E+ L G++ + Sbjct: 125 RGQ----KYIPPDVGAKLVQR------LSNPELSERELEVLGSLAQGMSNADI 167 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 67.4 bits (163), Expect = 8e-14 Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 2/121 (1%) Query: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 IL+V+D +L+ + L Y + +G +AL L PDLI+ D+ MP+MDG+ Sbjct: 11 ILLVDDLPNNLQLLSDLLINLGYTVRSVTSGKMALRTLQVKR--PDLILLDIKMPDMDGY 68 Query: 64 GLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSRLQK 123 + ++K + IP IF++ALG D K G DY+ KPF+ E+++ + + Sbjct: 69 QVCEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQIEEVVARIEGQFTI 128 Query: 124 Q 124 Q Sbjct: 129 Q 129 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 65.9 bits (159), Expect = 2e-13 Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 2/112 (1%) Query: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 IL+VED I +E+ E L + + A NG +AL LN+ L++ D+ MPEMDG Sbjct: 927 ILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYA--LVLMDMQMPEMDGI 984 Query: 64 GLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLN 115 A+++N + A +P + +TA D + + +G +D+L KP + E+L N Sbjct: 985 EATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEELWN 1036 Score = 41.6 bits (96), Expect = 5e-06 Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 3/117 (2%) Query: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSL--EVMP-DLIICDVMMPEM 60 +LVV+D R ++ + L + + E+G AL L E P ++ D MP M Sbjct: 773 VLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPNM 832 Query: 61 DGHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAV 117 DG + L+ +TA G + F K + G DD L+KP L +++ Sbjct: 833 DGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISPSVLFDSL 889 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 65.9 bits (159), Expect = 2e-13 Identities = 39/118 (33%), Positives = 67/118 (56%), Gaps = 2/118 (1%) Query: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 ILVV+D+++ R+L+ + L+ ++I EA NG A+ L S E P LI D+ MP MDG+ Sbjct: 632 ILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWE--PHLIFMDMRMPVMDGY 689 Query: 64 GLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSRL 121 ++ K A + LTA ++ +++G DD+L KPF++ + +++ L Sbjct: 690 EATKYIKGQVKGNATAVVALTASVLEEEKAIVLSAGCDDFLRKPFRENTIFDSLTKHL 747 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 64.3 bits (155), Expect = 7e-13 Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 9/131 (6%) Query: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 ILVVEDE + R + E Y + EAENG +L + + +L++ D+ +P +G Sbjct: 6 ILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNI--NLVVMDINLPGKNGL 63 Query: 64 GLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLL----NAVNS 119 L L++ ++P IFLT D G+ GADDYL KPF +L N ++ Sbjct: 64 LLARELREEL---SLPLIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHR 120 Query: 120 RLQKQAKLSAF 130 + Q K + F Sbjct: 121 AMPHQEKENTF 131 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 63.9 bits (154), Expect = 9e-13 Identities = 41/124 (33%), Positives = 69/124 (55%), Gaps = 2/124 (1%) Query: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 +L+VEDE + + + L ENY + ++G +A L+ V L I D M+P + G Sbjct: 3 LLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSGL 62 Query: 64 GLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSRLQK 123 L L+ + +++P + LTA + D +G+++GADDYLIKPF +LL + S ++ Sbjct: 63 ELCQKLR--GQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAELLARLRSLQRR 120 Query: 124 QAKL 127 +L Sbjct: 121 SPEL 124 >SYNE-PCC-01-002221 slr1213 Length = 241 Score = 62.8 bits (151), Expect = 2e-12 Identities = 38/119 (31%), Positives = 67/119 (56%), Gaps = 7/119 (5%) Query: 1 MSTILVVEDEAIIRELIGETLSLENYKI-LEAENGAVALGLLNSLEVMPDLIICDVMMP- 58 ++ IL+VEDE ++ + I + L + Y+I + A +GA AL + E PDL++ D+ + Sbjct: 2 VTKILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKI--AEFYPDLVLLDIRIKG 59 Query: 59 EMDGHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAV 117 E+DG I ++ +IP ++LTA + + + Y+IKPF++E LL+ V Sbjct: 60 EIDG---IEVAERIKSLYSIPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTV 115 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 62.8 bits (151), Expect = 2e-12 Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 4/120 (3%) Query: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 +LVVE+E + + L E Y + A +G G + E PDLII + +P M G Sbjct: 5 VLVVEEEEKLARFMELELKYEGYDVSVARDGLK--GFTQAQEFPPDLIIVNGALPGMSGL 62 Query: 64 GLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSRLQK 123 L L++ + IP I +TA +++ G+++GADDY++KPF ++ + +L++ Sbjct: 63 ELCRRLREMG--SRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRR 120 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 62.4 bits (150), Expect = 3e-12 Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 2/116 (1%) Query: 2 STILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMD 61 ++IL+VED I RE + L+ + ++ A NG AL LL S D I+ D+ MP ++ Sbjct: 718 ASILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTY--DAILMDIQMPMLN 775 Query: 62 GHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAV 117 G+ A+++ +P I +TA D K +++G +D+L KP K + L + Sbjct: 776 GYDATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLFQTL 831 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 60.1 bits (144), Expect = 1e-11 Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 2/111 (1%) Query: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 +LVV+D R L+ + L+ + + EAENG +A+ L S P +I+ D+ MP +DG Sbjct: 420 VLVVDDRPESRLLLRQLLTSLGFVVQEAENGEMAIALWESWH--PQVILMDMQMPVLDGR 477 Query: 64 GLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLL 114 ++ + + I LTA + + +++G DD+L KPF+ E+L+ Sbjct: 478 STTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELI 528 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 59.3 bits (142), Expect = 2e-11 Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 6/132 (4%) Query: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 IL+VEDE + I + L E Y + +G+ A L + L I D ++P + G Sbjct: 3 ILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSGL 62 Query: 64 GLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSRLQK 123 L L+ + +P + LTALG ++ +G+++GADDYL KPF +LL +RL+ Sbjct: 63 ELCQKLRTQGNS--LPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAELL----ARLRA 116 Query: 124 QAKLSAFYQGSI 135 + S +Q I Sbjct: 117 LQRRSPQFQPQI 128 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 58.5 bits (140), Expect = 4e-11 Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 2/119 (1%) Query: 1 MSTILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEM 60 M+ +L+VED + R+++ L + Y+++ A +G A+ + ++ P LI+ D+ +P + Sbjct: 4 MAKVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTM--AISESPQLILMDMSLPII 61 Query: 61 DGHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNS 119 DG ++ + A IP I LTA D + + +G DDY KP + + LL + + Sbjct: 62 DGWTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEA 120 >HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator protein (narP) Length = 208 Score = 57.0 bits (136), Expect = 1e-10 Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 8/171 (4%) Query: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 +L+++D ++R I + + L++ + A+ + G+ +L+ PD+II D+ M + G Sbjct: 7 VLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLSGL 66 Query: 64 GLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSRLQK 123 + L+ A I + LT D +++GAD YL+K + + LL + Q Sbjct: 67 DTLKGLRAEGVDARI--LILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRIAQG 124 Query: 124 QAKLSAFYQGSISSSLTERPRRSGTIGTPTLTPDEAEIWRDLEVGLNTGQV 174 + LS SI + L ER + +LT E + R + GL+ Q+ Sbjct: 125 EVILS----DSIKNLLLERTHEDNPL--DSLTDREMGVLRQIATGLSNKQI 169 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 55.8 bits (133), Expect = 2e-10 Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 8/132 (6%) Query: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 IL++ED+ +I + L+ + + +G + L S D ++ D+ +P++DG Sbjct: 3 ILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPY--DAVVLDLTLPKLDGL 60 Query: 64 GLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSRLQK 123 ++ + N + +P + LTA T+ + KG+ SGADDYL KPF L V +RLQ Sbjct: 61 EVLQQWRSNHQD--VPVLILTARDTLDERVKGLQSGADDYLCKPF----ALAEVAARLQA 114 Query: 124 QAKLSAFYQGSI 135 + Y S+ Sbjct: 115 LIRRRYGYHHSV 126 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 55.5 bits (132), Expect = 3e-10 Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 18/145 (12%) Query: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 ILVV+D+ +R + L E +++ A NG AL E+ P++++ D +MP MDG Sbjct: 14 ILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEAL--TKFAEIKPEVVLLDAVMPVMDGF 71 Query: 64 GLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPF--------------- 108 AL K + + + +T L + +GA DY+ KP Sbjct: 72 ACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLLYQ 131 Query: 109 -KQEDLLNAVNSRLQKQAKLSAFYQ 132 + + L +VN L++ AK+ Q Sbjct: 132 NRLQHQLESVNQMLERLAKVDQLTQ 156 >SYNE-PCC-01-000608 sll0921 Length = 222 Score = 53.9 bits (128), Expect = 9e-10 Identities = 34/118 (28%), Positives = 65/118 (55%), Gaps = 4/118 (3%) Query: 4 ILVVEDEAIIRELIGETLSLE-NYK-ILEAENGAVALGLLNSLEVMPDLIICDVMMPEMD 61 I ++EDE +IR+ + + L++E +++ + EA NG LGL+ + PD++I D+ +P+M+ Sbjct: 6 IALIEDEDLIRQGLQDALTMEPSFEWVGEAANGR--LGLVMMQQTRPDVVIIDIGLPDMN 63 Query: 62 GHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNS 119 G + L+K + LT + ++GAD Y +K + E L+ A+ + Sbjct: 64 GIDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQA 121 >SYNE-PCC-01-002778 slr1969 Length = 750 Score = 45.8 bits (107), Expect = 2e-07 Identities = 34/122 (27%), Positives = 63/122 (51%), Gaps = 4/122 (3%) Query: 2 STILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMD 61 S+++V+E + I LI E L++ NY+++ + AL + L+ P LII D +D Sbjct: 630 SSVIVIEQDEEIATLICELLTVANYQVIWLIDTTNALQQVELLQ--PGLIIVDGDF--VD 685 Query: 62 GHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSRL 121 + ++K+ + + + L+ + +++ G DDYL+KP + E LL V S Sbjct: 686 VTEVTRGIKKSRRISKVTVFLLSESLSSAEWQALSQKGIDDYLLKPLQPELLLQRVQSIQ 745 Query: 122 QK 123 Q+ Sbjct: 746 QE 747 >SYNE-PCC-01-000877 sll1330 Length = 250 Score = 43.9 bits (102), Expect = 9e-07 Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 5/126 (3%) Query: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 I VVE +R L+ L Y + + A N+ +P L + D + + DG Sbjct: 6 ISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQ--LPTLAVIDSDLTDGDGI 63 Query: 64 GLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSRLQK 123 L L + ++ L+A T +D G+ +GADDYL KPF ++ L + +++ Sbjct: 64 ELCRWLYQQHQSM---IFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRR 120 Query: 124 QAKLSA 129 ++A Sbjct: 121 VRTVAA 126 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 41.6 bits (96), Expect = 5e-06 Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 9/114 (7%) Query: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 IL+ ED + +++ + L+ Y + A NG + L + DL++ D+ MP MDG Sbjct: 1192 ILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALE--KKFYDLVLMDMQMPVMDG- 1248 Query: 64 GLITALQKNAKTAAIP----FIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDL 113 ITA + +T + + +TA D ++ +++G D Y+ KP L Sbjct: 1249 --ITACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQL 1300 >SYNE-PCC-01-001160 sll1708 Length = 226 Score = 41.6 bits (96), Expect = 5e-06 Identities = 35/118 (29%), Positives = 64/118 (54%), Gaps = 10/118 (8%) Query: 4 ILVVEDEAIIRELIGETLSL-ENYKIL-EAENGAVALGLLNSLEVM-PDLIICDVMMPEM 60 IL+VED+ +++ + + L E ++I+ +NG G + V+ PDLI+ D+ +P + Sbjct: 19 ILIVEDDPLMQLGLEQALGAHERFEIIGRVDNG---YGAVQQAAVLNPDLIVMDIGLPGL 75 Query: 61 DGHGLITALQKNAKTA-AIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAV 117 DG I A ++ +T+ I + LT+ + ++SGAD Y +K E L+ A+ Sbjct: 76 DG---IEATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAI 130 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.321 0.138 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,144 Number of Sequences: 78 Number of extensions: 1591 Number of successful extensions: 78 Number of sequences better than 1.0e-05: 34 Number of HSP's better than 0.0 without gapping: 21 Number of HSP's successfully gapped in prelim test: 13 Number of HSP's that attempted gapping in prelim test: 19 Number of HSP's gapped (non-prelim): 39 length of query: 421 length of database: 48,235 effective HSP length: 65 effective length of query: 356 effective length of database: 43,165 effective search space: 15366740 effective search space used: 15366740 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 94 (40.8 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-002617 slr1759 (1462 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-002617 slr1759 2740 0.0 SYNE-PCC-01-001306 sll1905 371 e-104 SYNE-PCC-01-002873 slr2098 352 5e-99 SYNE-PCC-01-002879 slr2104 274 2e-75 SYNE-PCC-01-001132 sll1672 200 2e-53 SYNE-PCC-01-000891 sll1353 197 3e-52 SYNE-PCC-01-001280 sll1871 184 2e-48 SYNE-PCC-01-001294 sll1888 182 5e-48 SYNE-PCC-01-000800 sll1228 180 3e-47 SYNE-PCC-01-000295 sll0474 155 8e-40 SYNE-PCC-01-002778 slr1969 146 4e-37 SYNE-PCC-01-001509 slr0210 127 2e-31 SYNE-PCC-01-001517 slr0222 121 2e-29 SYNE-PCC-01-002220 slr1212 105 8e-25 SYNE-PCC-01-000985 sll1475 80 3e-17 SYNE-PCC-01-002788 slr1982 79 8e-17 SYNE-PCC-01-001690 slr0473 79 1e-16 SYNE-PCC-01-002635 slr1783 64 3e-12 SYNE-PCC-01-002486 slr1584 64 3e-12 SYNE-PCC-01-001133 sll1673 61 3e-11 SYNE-PCC-01-000414 sll0649 60 4e-11 SYNE-PCC-01-002033 slr0947 59 8e-11 SYNE-PCC-01-000523 sll0797 57 3e-10 SYNE-PCC-01-002086 slr1042 57 5e-10 SYNE-PCC-01-002731 slr1909 56 9e-10 SYNE-PCC-01-002672 slr1837 55 1e-09 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 53 8e-09 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 52 1e-08 SYNE-PCC-01-001160 sll1708 52 2e-08 SYNE-PCC-01-001437 slr0081 50 4e-08 SYNE-PCC-01-001461 slr0115 49 9e-08 SYNE-PCC-01-002618 slr1760 49 1e-07 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 48 2e-07 SYNE-PCC-01-001075 sll1592 47 4e-07 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 47 4e-07 SYNE-PCC-01-001575 slr0312 46 9e-07 SYNE-PCC-01-000242 sll0396 46 9e-07 SYNE-PCC-01-000518 sll0789 45 2e-06 SYNE-PCC-01-000983 sll1473 44 4e-06 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 2740 bits (7103), Expect = 0.0 Identities = 1388/1462 (94%), Positives = 1388/1462 (94%) Query: 1 MVISATVISMKXXXXXXXXXXXXXXXXGAGLSVMTVHTWLFLYNQVQERLKQVLTNRLTN 60 MVISATVISMK GAGLSVMTVHTWLFLYNQVQERLKQVLTNRLTN Sbjct: 1 MVISATVISMKSPLRRLLLSPVLPILIGAGLSVMTVHTWLFLYNQVQERLKQVLTNRLTN 60 Query: 61 IHEQIENQLNIHVRQLEQMAGRWERSPTGTEQTDWRLDARAQAEGFDGYQTIQWVDPKFV 120 IHEQIENQLNIHVRQLEQMAGRWERSPTGTEQTDWRLDARAQAEGFDGYQTIQWVDPKFV Sbjct: 61 IHEQIENQLNIHVRQLEQMAGRWERSPTGTEQTDWRLDARAQAEGFDGYQTIQWVDPKFV 120 Query: 121 VRWVEPLPDDEHDIDYANQYPHQIQSLELAARQKNTILSGVVDLDQGEKGFLVYVPLFIG 180 VRWVEPLPDDEHDIDYANQYPHQIQSLELAARQKNTILSGVVDLDQGEKGFLVYVPLFIG Sbjct: 121 VRWVEPLPDDEHDIDYANQYPHQIQSLELAARQKNTILSGVVDLDQGEKGFLVYVPLFIG 180 Query: 181 DRFDGFVVGVFQLDQFIGSVRPLSGNKPDQDSGLRSFGLRIFEGNQLIYNDVPDDWEQDI 240 DRFDGFVVGVFQLDQFIGSVRPLSGNKPDQDSGLRSFGLRIFEGNQLIYNDVPDDWEQDI Sbjct: 181 DRFDGFVVGVFQLDQFIGSVRPLSGNKPDQDSGLRSFGLRIFEGNQLIYNDVPDDWEQDI 240 Query: 241 VVTQELAWANSLPQAEAMTSRWQLQLVPGPILLDQYGSSQWILFSGLLMAWAVAIAVYYL 300 VVTQELAWANSLPQAEAMTSRWQLQLVPGPILLDQYGSSQWILFSGLLMAWAVAIAVYYL Sbjct: 241 VVTQELAWANSLPQAEAMTSRWQLQLVPGPILLDQYGSSQWILFSGLLMAWAVAIAVYYL 300 Query: 301 QKSSKHSEQLSESIKQQQKVEEFLKSTLQELAVQKTALDEAAIVAITDTEGVITYVNDKF 360 QKSSKHSEQLSESIKQQQKVEEFLKSTLQELAVQKTALDEAAIVAITDTEGVITYVNDKF Sbjct: 301 QKSSKHSEQLSESIKQQQKVEEFLKSTLQELAVQKTALDEAAIVAITDTEGVITYVNDKF 360 Query: 361 VEVSGYSREELIGNTHRLVSSGYHSPEFFQQFWQTIRAGKVWHGQINNRAKAGNTYWVDS 420 VEVSGYSREELIGNTHRLVSSGYHSPEFFQQFWQTIRAGKVWHGQINNRAKAGNTYWVDS Sbjct: 361 VEVSGYSREELIGNTHRLVSSGYHSPEFFQQFWQTIRAGKVWHGQINNRAKAGNTYWVDS 420 Query: 421 TVVPFLDDNGNPYQYLAIRFEITSSKQAEKSLRESEARFRMMADTSPIMLWVADQDKKMT 480 TVVPFLDDNGNPYQYLAIRFEITSSKQAEKSLRESEARFRMMADTSPIMLWVADQDKKMT Sbjct: 421 TVVPFLDDNGNPYQYLAIRFEITSSKQAEKSLRESEARFRMMADTSPIMLWVADQDKKMT 480 Query: 481 FVNQSWLEFRGATLAEESGNGYLEGIHPDDKGHYLGVYSQAFGDXXXXXXXXXXXXVDQQ 540 FVNQSWLEFRGATLAEESGNGYLEGIHPDDKGHYLGVYSQAFGD VDQQ Sbjct: 481 FVNQSWLEFRGATLAEESGNGYLEGIHPDDKGHYLGVYSQAFGDRRRFELEYRYRRVDQQ 540 Query: 541 YRWIVNVGVPRYLEDGKFMGYVGSCLDITDRKQAQDILQKKLNQILLMRKISQEIRRSLQ 600 YRWIVNVGVPRYLEDGKFMGYVGSCLDITDRKQAQDILQKKLNQILLMRKISQEIRRSLQ Sbjct: 541 YRWIVNVGVPRYLEDGKFMGYVGSCLDITDRKQAQDILQKKLNQILLMRKISQEIRRSLQ 600 Query: 601 PTLIFQTAARQVGNVFAVSRCLIHNYSEATTLQVPVVAEYLGGQFTSLLAGEIAVEQAYD 660 PTLIFQTAARQVGNVFAVSRCLIHNYSEATTLQVPVVAEYLGGQFTSLLAGEIAVEQAYD Sbjct: 601 PTLIFQTAARQVGNVFAVSRCLIHNYSEATTLQVPVVAEYLGGQFTSLLAGEIAVEQAYD 660 Query: 661 PTIIQGDRAMAVVDLDQDLNSTHTKAFYQRFQVKSFLAVRTSYQGKANGIIALHQCDRQR 720 PTIIQGDRAMAVVDLDQDLNSTHTKAFYQRFQVKSFLAVRTSYQGKANGIIALHQCDRQR Sbjct: 661 PTIIQGDRAMAVVDLDQDLNSTHTKAFYQRFQVKSFLAVRTSYQGKANGIIALHQCDRQR 720 Query: 721 VWTADXXXXXXXXXXQMGIXXXXXXXXXXXXXXXXXXXXXNLELEKATWAAEAANRAKGE 780 VWTAD QMGI NLELEKATWAAEAANRAKGE Sbjct: 721 VWTADEIELLEAIAEQMGIALAQAALLEKERERRRELAQKNLELEKATWAAEAANRAKGE 780 Query: 781 FLAMMSHEIRTPMNGVIGMTELLIMTDLNLQQLDYVQTIRQSGETLLTIINDILDFSKIE 840 FLAMMSHEIRTPMNGVIGMTELLIMTDLNLQQLDYVQTIRQSGETLLTIINDILDFSKIE Sbjct: 781 FLAMMSHEIRTPMNGVIGMTELLIMTDLNLQQLDYVQTIRQSGETLLTIINDILDFSKIE 840 Query: 841 ADKLVLETQAFELRPLIETVLEMFGPIARAKHLELTYGIDPQTPARILGDQVRLRQILSN 900 ADKLVLETQAFELRPLIETVLEMFGPIARAKHLELTYGIDPQTPARILGDQVRLRQILSN Sbjct: 841 ADKLVLETQAFELRPLIETVLEMFGPIARAKHLELTYGIDPQTPARILGDQVRLRQILSN 900 Query: 901 LIGNALKFTEKGEVVLTVKGEPFDPAESYHTILNLPHPSHRICFNLRDTGIGIPLDRQDR 960 LIGNALKFTEKGEVVLTVKGEPFDPAESYHTILNLPHPSHRICFNLRDTGIGIPLDRQDR Sbjct: 901 LIGNALKFTEKGEVVLTVKGEPFDPAESYHTILNLPHPSHRICFNLRDTGIGIPLDRQDR 960 Query: 961 LFKSFSQVDSSTTRKYGGTGLGLVISQRLTQMMGGVLTVTSEPGVGSNFRFCILTTAQAP 1020 LFKSFSQVDSSTTRKYGGTGLGLVISQRLTQMMGGVLTVTSEPGVGSNFRFCILTTAQAP Sbjct: 961 LFKSFSQVDSSTTRKYGGTGLGLVISQRLTQMMGGVLTVTSEPGVGSNFRFCILTTAQAP 1020 Query: 1021 ALAEADSVQQMKGKQVLIVDDNETNRRILQDQCQAWGLVCHCFTSGESALDWFARCPDLD 1080 ALAEADSVQQMKGKQVLIVDDNETNRRILQDQCQAWGLVCHCFTSGESALDWFARCPDLD Sbjct: 1021 ALAEADSVQQMKGKQVLIVDDNETNRRILQDQCQAWGLVCHCFTSGESALDWFARCPDLD 1080 Query: 1081 AAILDLQMPNMDGITLAHHLRQFAQGKDLPIILLSSGLVAGADELSVFQTVLNKPVRQSL 1140 AAILDLQMPNMDGITLAHHLRQFAQGKDLPIILLSSGLVAGADELSVFQTVLNKPVRQSL Sbjct: 1081 AAILDLQMPNMDGITLAHHLRQFAQGKDLPIILLSSGLVAGADELSVFQTVLNKPVRQSL 1140 Query: 1141 IFDSLVNIFQGSIGLADYAPQFDQLDLPEFVPDGDGLPTEDNATSLQPALQILLAEDNLV 1200 IFDSLVNIFQGSIGLADYAPQFDQLDLPEFVPDGDGLPTEDNATSLQPALQILLAEDNLV Sbjct: 1141 IFDSLVNIFQGSIGLADYAPQFDQLDLPEFVPDGDGLPTEDNATSLQPALQILLAEDNLV 1200 Query: 1201 NQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGITACRHIRQTLP 1260 NQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGITACRHIRQTLP Sbjct: 1201 NQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGITACRHIRQTLP 1260 Query: 1261 LERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQLRKVLQDTSALITSPQAREDI 1320 LERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQLRKVLQDTSALITSPQAREDI Sbjct: 1261 LERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQLRKVLQDTSALITSPQAREDI 1320 Query: 1321 VTLGDKITVVEEQTMVKPTDVTESPLDPTAIAFLRDDLCGGDLTLFGEMVACYCQESQKL 1380 VTLGDKITVVEEQTMVKPTDVTESPLDPTAIAFLRDDLCGGDLTLFGEMVACYCQESQKL Sbjct: 1321 VTLGDKITVVEEQTMVKPTDVTESPLDPTAIAFLRDDLCGGDLTLFGEMVACYCQESQKL 1380 Query: 1381 IEELVQGLEVDDFAVIRRTAHXXXXXXXXXXXXXXXTFCQQLEKNAGSGNLGLGSPPQLV 1440 IEELVQGLEVDDFAVIRRTAH TFCQQLEKNAGSGNLGLGSPPQLV Sbjct: 1381 IEELVQGLEVDDFAVIRRTAHSLKSSSASLGAQQLSTFCQQLEKNAGSGNLGLGSPPQLV 1440 Query: 1441 DRCRQLHIAVVEALAPFTIPSP 1462 DRCRQLHIAVVEALAPFTIPSP Sbjct: 1441 DRCRQLHIAVVEALAPFTIPSP 1462 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 371 bits (952), Expect = e-104 Identities = 260/680 (38%), Positives = 357/680 (52%), Gaps = 67/680 (9%) Query: 761 NLELEKATWAAEAANRAKGEFLAMMSHEIRTPMNGVIGMTELLIMTDLNLQQLDYVQTIR 820 N EL AT AAEAANR+K EFLA MSHEIRTPMN +IGMT LL+ TDL QQ + QTIR Sbjct: 304 NQELVAATTAAEAANRSKSEFLATMSHEIRTPMNAIIGMTGLLLDTDLTTQQKYFAQTIR 363 Query: 821 QSGETLLTIINDILDFSKIEADKLVLETQAFELRPLIETVLEMFGPIARAKHLELTYGID 880 SGETLLT+INDILDFSKIEA KL LE F+L +E L++ P AR K L L Sbjct: 364 NSGETLLTLINDILDFSKIEAGKLDLEVYPFDLGQCLEEALDVVVPSARQKSLTLIRRFL 423 Query: 881 PQTPARILGDQVRLRQILSNLIGNALKFTEKGEVVLTVKGEPFDPAESYHTILNLPHPSH 940 P + GD RLRQIL NL+ NA+KFTE G+V +TV+ D A+ + Sbjct: 424 TPIPPNLQGDVTRLRQILVNLLSNAVKFTEAGQVKVTVEVVDHDAAKG----------EY 473 Query: 941 RICFNLRDTGIGIPLDRQDRLFKSFSQVDSSTTRKYGGTGLGLVISQRLTQMMGGVLTVT 1000 +ICF ++DTGIGI ++Q LF++FSQ +SS TR++GGTGLGL I RLT +MGG + Sbjct: 474 QICFAVQDTGIGIAPNQQQALFQAFSQGNSSITRRFGGTGLGLAICVRLTALMGGTIWAE 533 Query: 1001 SEPGV----------------GSNFRFCILTTAQAPALAEADSVQQ--MKGKQVLIVDDN 1042 S V GS F F + T +++ G+ VL+ D + Sbjct: 534 SNGCVVGNPPELWQIGQPTIEGSTFYFTVNLTVLPSCAYSVHNLRHSLFIGRSVLVADYD 593 Query: 1043 ETNRRILQDQCQAWGLVCHCFTSGESAL---DWFARCPDLDAAILDLQMPNMDGITLAHH 1099 E +++ +W L T A D +R + L L P +G Sbjct: 594 EGRGTRMRNLLASWRLQAEQITFSSPAKLGEDLKSRLTQKNYGALILHCPYPEG--RGKQ 651 Query: 1100 LRQFAQGK---------DLPIILLSSGLVAGADELSVFQTVLNKPVRQSLIFDSLVNIFQ 1150 F GK D+P+++ + ++ + S + + ++ + D L N Sbjct: 652 FTDFDLGKITTWAPTEQDIPVLVATDIYLSPGERYSGDKPPVQAWIKSPINPDELENTLV 711 Query: 1151 GSIGLADYAPQFDQLDLPEFVPDGDGLPTEDNATSLQP----ALQILLAEDNLVNQKVAH 1206 +G Q + P V TE + L P L ILLAEDNL+NQ+VA Sbjct: 712 DVLG---------QTEPPTLV------STEAISGPLFPYSSSNLTILLAEDNLINQQVAK 756 Query: 1207 QMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGITACRHIRQTLPLERQPR 1266 +L LGYPV + NNGQE + AL K YD+VLMD++MP MDG+TA HIR++ +P Sbjct: 757 LLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTATEHIRRSQGRSERPW 816 Query: 1267 IVAMTANAMPGDRQECLDAGMDGYISKPISINQLRKVLQ-DTSALITSPQAREDIVTLGD 1325 I+A+TA +M GDR+ CL +GM+ Y+SKPI + L++ LQ +AL ++ Q R V+ Sbjct: 817 IIAVTAYSMEGDRERCLASGMNDYVSKPIRLEALQQALQVAATALQSTSQDRMATVSCVS 876 Query: 1326 KITVVEEQTMVKPTD---VTESPLDPTAIAFLRD-DLCGGDLTLFGEMVACYCQESQKLI 1381 + P D T P+D I LRD D G L L E++ YCQ + +L+ Sbjct: 877 AFEAKPSPSSPCPEDPAGTTLPPIDQDIICSLRDLDRENGQLIL-REIIDIYCQTAPELL 935 Query: 1382 EELVQGLEVDDFAVIRRTAH 1401 + + + D+ + AH Sbjct: 936 QRIKLAIANQDWGNLSSAAH 955 Score = 57.4 bits (137), Expect = 3e-10 Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 1/118 (0%) Query: 1183 ATSLQPALQILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQ 1242 AT + IL+ +D N V ++L GY +G E + + + DL+L+D+ Sbjct: 11 ATFEPESFLILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQPDLILLDLM 70 Query: 1243 MPVMDGITACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQL 1300 MP MDG+ C ++Q P R ++ +TA+ D + G Y++KP S +L Sbjct: 71 MPGMDGLEVCDRLKQD-PQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPEL 127 Score = 50.8 bits (120), Expect = 3e-08 Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 3/82 (3%) Query: 1036 VLIVDDNETNRRILQDQCQAWGLVCHCFTSGESALDWFARC-PDLDAAILDLQMPNMDGI 1094 +L+VDD + N ++ + + G TSG AL + PDL +LDL MP MDG+ Sbjct: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQPDL--ILLDLMMPGMDGL 77 Query: 1095 TLAHHLRQFAQGKDLPIILLSS 1116 + L+Q Q +D+P+I L++ Sbjct: 78 EVCDRLKQDPQTRDIPVIFLTA 99 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 352 bits (903), Expect = 5e-99 Identities = 246/658 (37%), Positives = 345/658 (52%), Gaps = 64/658 (9%) Query: 763 ELEKATWAAEAANRAKGEFLAMMSHEIRTPMNGVIGMTELLIMTDLNLQQLDYVQTIRQS 822 E+++A AE A+R K +FLA MSHEIRTPMN VIGMT L + TDL +Q +Y+ IR S Sbjct: 512 EMKRAKELAEEASRIKADFLANMSHEIRTPMNAVIGMTHLALKTDLTPRQREYLHKIRFS 571 Query: 823 GETLLTIINDILDFSKIEADKLVLETQAFELRPLIETVLEMFGPIARAKHLELTYGIDPQ 882 G+ LL +INDILDFSKIEA KL +E+ F+L +++ V + A K LEL + ID Sbjct: 572 GQHLLGVINDILDFSKIEAGKLPMESIDFDLDKVLDNVATLISEKATNKGLELLFDIDRN 631 Query: 883 TPARILGDQVRLRQILSNLIGNALKFTEKGEVVLTVKGEPFDPAESYHTILNLPHPSHRI 942 P +GD +RL QIL N NA+KFTE+G++ + V+ + + +L L Sbjct: 632 LPRHFIGDPLRLGQILINYANNAVKFTEQGDITIVVRLQEY---RDQDVVLYLA------ 682 Query: 943 CFNLRDTGIGIPLDRQDRLFKSFSQVDSSTTRKYGGTGLGLVISQRLTQMMGGVLTVTSE 1002 ++DTGIGI + LF SF Q DSSTTR +GGTGLGL I +R+ ++MGG + V SE Sbjct: 683 ---VKDTGIGIKPEHIANLFNSFQQADSSTTRNFGGTGLGLAICKRIAELMGGEVGVESE 739 Query: 1003 PGVGSNF--RFCILTTAQAPALAEADSVQQMKGKQVLIVDDNETNRRILQDQCQAWGLVC 1060 G GS F + C+ + P + ++GK+VL+VDDN+ R +++D + V Sbjct: 740 YGQGSTFWAKVCLQKSNVIPHRLVLS--KDLEGKRVLVVDDNDHARLVMKDLLEQMKFVV 797 Query: 1061 HCFTSGESALDWFARCP----DLDAAILDLQMPNMDGITLAHHLRQFAQGKDLPIILLSS 1116 SG AL++ A +D QMPNMDG+ +A L+ I ++++ Sbjct: 798 ETVESGPEALNFLAEADRENHPHSIVFIDWQMPNMDGLEVARRLKAMGLNHQPSIFIVTA 857 Query: 1117 GLVAGADELSV------FQTVLNKPVRQSLIFDSLVNIFQGSIGLADYAPQFDQLDLPEF 1170 G +EL V VL KP+ S++FDSL + LA Q Sbjct: 858 ---YGREELFVKAKSLGIDDVLVKPISPSVLFDSLARVLGDPTALAQEMRQ--------- 905 Query: 1171 VPDGDGLPTEDNATSLQPAL---QILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVID 1227 G+ ED A + +ILL EDN +NQ+VA ++L ++G+ V +A NG ++ Sbjct: 906 ---SSGIGAEDLALEKLRRIRGARILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALE 962 Query: 1228 ALEKKFYDLVLMDMQMPVMDGITACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGM 1287 L Y LVLMDMQMP MDGI A IRQ P Q IVAMTAN M GDR+ CL AGM Sbjct: 963 RLNNNAYALVLMDMQMPEMDGIEATIAIRQN-PRYAQLPIVAMTANVMQGDRERCLQAGM 1021 Query: 1288 DGYISKPISINQL-RKVLQDTSALITSPQAREDIVTLGDKITVVEEQTMVKPTDVTESPL 1346 + ++ KPI +L K+L + SP A E I E++ + +D S Sbjct: 1022 NDHLGKPIEPEELWNKLLHWIP--VDSPLAPETI-----------EESAINTSDPEIS-- 1066 Query: 1347 DPTAIAFLRDD---LCGGDLTLFGEMVACYCQESQKLIEELVQGLEVDDFAVIRRTAH 1401 P DD G +L+ +M+ + + E+ Q L D+ R AH Sbjct: 1067 IPHIPGLNSDDGLRRVLGKKSLYLKMLHKFVASQSSFLPEITQALGEKDYGFAERLAH 1124 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 274 bits (700), Expect = 2e-75 Identities = 157/403 (38%), Positives = 242/403 (60%), Gaps = 32/403 (7%) Query: 764 LEKATWAAEAANRAKGEFLAMMSHEIRTPMNGVIGMTELLIMTDLNLQQLDYVQTIRQSG 823 L +A AE A +AK EFLA MSHEIRTPMN +IGM+EL++ TDL QQ +Y+Q ++ +G Sbjct: 444 LLEAKLVAEGATKAKSEFLANMSHEIRTPMNAIIGMSELVLQTDLTSQQRNYLQKVQYAG 503 Query: 824 ETLLTIINDILDFSKIEADKLVLETQAFELRPLIETVLEMFGPIARAKHLELTYGIDPQT 883 E LL IIN+ILDFSK+EA KL LE + F + ++ + + G A AK L L + +DP+ Sbjct: 504 ELLLGIINNILDFSKMEAGKLELEQKPFSVEEVMGNLHSILGIQAEAKGLTLNFHLDPRI 563 Query: 884 PARILGDQVRLRQILSNLIGNALKFTEKGEVVLTVKGEPFDPAESYHTILNLPHPSHRIC 943 P ++GD++RL QIL NL NA+KFT +GE+ T++G+ +L + ++ Sbjct: 564 PPILVGDRLRLSQILINLGNNAVKFTNQGEI--TIRGQ----------LLKTENEQTKLQ 611 Query: 944 FNLRDTGIGIPLDRQDRLFKSFSQVDSSTTRKYGGTGLGLVISQRLTQMMGGVLTVTSEP 1003 F++ DTGIG+ D+Q +LF+ F+Q ++ST+R+YGGTGLGL IS+ LT++MGG + + S Sbjct: 612 FSVTDTGIGLTPDQQSKLFQWFNQGETSTSRQYGGTGLGLAISKSLTELMGGDIWLESVV 671 Query: 1004 GVGSNFRFCILTTAQAPALAE----------------ADSVQQMKGKQVLIVDDNETNRR 1047 G GS F F + +PA+A+ ++ Q++G +L+V+DNE NR Sbjct: 672 GQGSTFHFTVCLGTASPAVAQDYLVSRVSILEAKPSVTQAITQLEGASILLVEDNEINRE 731 Query: 1048 ILQDQCQAWGLVCHCFTSGESALDWFARCPDLDAAILDLQMPNMDGITLAHHLRQFAQGK 1107 D + GL +G+ AL DA ++D+QMP ++G +RQ + Sbjct: 732 FAHDLLTSKGLRVQVANNGQEALT-LLTSNTYDAILMDIQMPMLNGYDATRAIRQQEYHR 790 Query: 1108 DLPIILLSSGLVAGADELSV---FQTVLNKPVRQSLIFDSLVN 1147 +LPII +++ +AG E ++ L KP++ L+F +L + Sbjct: 791 NLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLFQTLAH 833 Score = 106 bits (264), Expect = 6e-25 Identities = 62/156 (39%), Positives = 90/156 (57%), Gaps = 1/156 (0%) Query: 1149 FQGSIGLADYAPQFDQLDLPEFVPDGDGLPTEDNATSLQPALQILLAEDNLVNQKVAHQM 1208 F ++ L +P Q L V + P+ A + ILL EDN +N++ AH + Sbjct: 677 FHFTVCLGTASPAVAQDYLVSRVSILEAKPSVTQAITQLEGASILLVEDNEINREFAHDL 736 Query: 1209 LNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGITACRHIRQTLPLERQPRIV 1268 L + G V +ANNGQE + L YD +LMD+QMP+++G A R IRQ R I+ Sbjct: 737 LTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYDATRAIRQQ-EYHRNLPII 795 Query: 1269 AMTANAMPGDRQECLDAGMDGYISKPISINQLRKVL 1304 AMTANAM GD+++ LDAGM+ +++KPI + L + L Sbjct: 796 AMTANAMAGDQEKALDAGMNDHLTKPIKPDLLFQTL 831 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 200 bits (509), Expect = 2e-53 Identities = 140/407 (34%), Positives = 223/407 (54%), Gaps = 35/407 (8%) Query: 762 LELEKATWAAEAANRAKGEFLAMMSHEIRTPMNGVIGMTELLIMT-DLNLQQLDYVQTIR 820 ++L +A AE+ +AK F+A MSHE+R+P+N +IG ++L++ T +L ++Q + I+ Sbjct: 349 VDLVRAKEIAESEAKAKSTFVANMSHELRSPLNAIIGFSQLMLRTKNLPMEQYENAGIIQ 408 Query: 821 QSGETLLTIINDILDFSKIEADKLVLETQAFELRPLIETVLEMFGPIARAKHLELTYGID 880 +SGE LL +IN+ILDFSKIEA K L F+L L++ + +M A + +EL + D Sbjct: 409 RSGEYLLNLINNILDFSKIEAGKTHLNRHNFDLYLLLDDLEDMLHLKAANEGIELIFIRD 468 Query: 881 PQTPARILGDQVRLRQILSNLIGNALKFTEKGEVVLTVKGEPFDPAESYHTI----LNLP 936 P + GD+++LRQIL NL+ NA+KFT +GEVVLT F AE I P Sbjct: 469 HDLPRYVYGDEIKLRQILLNLLSNAIKFTTEGEVVLT---SNFRNAEQQEVINPETSTEP 525 Query: 937 HPSHRICFNLRDTGIGIPLDRQDRLFKSFSQVDSSTTRKYGGTGLGLVISQRLTQMMGGV 996 + + F ++DTG GI LF++FSQ +S + GTGLGL I+++ ++MGG Sbjct: 526 KNKYWLDFTIKDTGKGISEVELSHLFEAFSQTESGRNAQ-EGTGLGLAITRQFIKLMGGD 584 Query: 997 LTVTSEPGVGSNFRFCILTTAQAPALA-EADSVQQMKG-------KQVLIVDDNETNRRI 1048 + V+S G+ F F IL L+ E +S +++ ++L+VDD NR++ Sbjct: 585 INVSSVVDQGTTFSFSILVDLGEITLSREPNSAKKVLALTPGQPVYKILVVDDKSVNRQL 644 Query: 1049 LQDQCQAWGLVCHCFTSGESALD-WFARCPDLDAAILDLQMPNMDGITLAHHLRQFAQGK 1107 L +G ++G+ A+ W + P L +D++MP MDG +++ +G Sbjct: 645 LIKLLAPFGFEIEEASNGQEAIALWESWEPHL--IFMDMRMPVMDGYEATKYIKGQVKGN 702 Query: 1108 DLPIILLSSG---------LVAGADELSVFQTVLNKPVRQSLIFDSL 1145 ++ L++ L AG D+ L KP R++ IFDSL Sbjct: 703 ATAVVALTASVLEEEKAIVLSAGCDDF------LRKPFRENTIFDSL 743 Score = 71.2 bits (173), Expect = 2e-14 Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 1/114 (0%) Query: 1187 QPALQILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVM 1246 QP +IL+ +D VN+++ ++L G+ + A+NGQE I E L+ MDM+MPVM Sbjct: 627 QPVYKILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVM 686 Query: 1247 DGITACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQL 1300 DG A ++I+ + +VA+TA+ + ++ L AG D ++ KP N + Sbjct: 687 DGYEATKYIKGQVK-GNATAVVALTASVLEEEKAIVLSAGCDDFLRKPFRENTI 739 >SYNE-PCC-01-000891 sll1353 Length = 998 Score = 197 bits (500), Expect = 3e-52 Identities = 114/249 (45%), Positives = 157/249 (63%), Gaps = 9/249 (3%) Query: 762 LELEKATWAAEAANRAKGEFLAMMSHEIRTPMNGVIGMTELLIMTDLNLQQLD-YVQTIR 820 ++L +A +AE ANR K EFLA +SHEIRTPMN ++G +LL+ DL+L Q Y+ I Sbjct: 584 IKLREAKESAELANRVKSEFLANISHEIRTPMNAILGFCDLLLQKDLSLSQTKKYLNAIG 643 Query: 821 QSGETLLTIINDILDFSKIEADKLVLETQAFELRPLIETVLEMFGPIARAKHLELTYGID 880 S + LL +I+DILD SKIEA KLV+ + +LR +I + ++F A +K L LT ID Sbjct: 644 SSSKILLALIDDILDISKIEAGKLVIHLEPVDLRVIIREIKQIFDYKAESKSLLLTIQID 703 Query: 881 PQTPARILGDQVRLRQILSNLIGNALKFTEKGEVVLTVKGEPFDPAESYHTILNLPHPSH 940 I D VRLRQIL NL+GNALKFTE+G+V + + E S T ++L Sbjct: 704 ETLNQAIYFDAVRLRQILFNLVGNALKFTEEGQVFIYIGVEGIQ-VRSQGTYISL----- 757 Query: 941 RICFNLRDTGIGIPLDRQDRLFKSFSQVDSSTTRKYGGTGLGLVISQRLTQMMGGVLTVT 1000 + DTGIGI + Q ++F F+Q +TRKYGGTGLGL I++RLT ++GG ++++ Sbjct: 758 --AIEVTDTGIGIAPEDQAKIFDVFTQSQGQSTRKYGGTGLGLTITRRLTALLGGEISLS 815 Query: 1001 SEPGVGSNF 1009 S G GS F Sbjct: 816 SRLGEGSTF 824 >SYNE-PCC-01-001280 sll1871 Length = 674 Score = 184 bits (467), Expect = 2e-48 Identities = 111/269 (41%), Positives = 165/269 (61%), Gaps = 23/269 (8%) Query: 764 LEKATWAAEAANRAKGEFLAMMSHEIRTPMNGVIGMTELLI--MTDLNLQQL-DYVQTIR 820 LE A+ AEAAN K FLA MSHE+RTP+N +IG +E+LI DL+ ++L + I Sbjct: 424 LELASSEAEAANATKSIFLANMSHELRTPLNAIIGYSEMLIEEAEDLDSEELVPDLDKIL 483 Query: 821 QSGETLLTIINDILDFSKIEADKLVLETQAFELRPLIETVLEMFGPIARAKHLELTYGID 880 +SG++LL +IND+LD SKIEA K+ L + F L+ LI +L+ P+ + + +L I Sbjct: 484 RSGKSLLALINDLLDISKIEAGKMELYLETFNLKELIAGILDTISPLLKNNNNKLEVEIS 543 Query: 881 PQTPARILGDQVRLRQILSNLIGNALKFTEKGEVVLTVKGEPFDPAESYHTILNLPHPSH 940 ++ + GD ++LRQ + NL+ NA KFT+ G + V+ D + Sbjct: 544 LESE-EVYGDLIKLRQGILNLLSNASKFTKDGIISFIVEEFKVDEKDW------------ 590 Query: 941 RICFNLRDTGIGIPLDRQDRLFKSFSQVDSSTTRKYGGTGLGLVISQRLTQMMGGVLTVT 1000 + F ++DTGIG+ ++ +LF+ F+Q DSSTTRKYGGTGLGL I+++ QMMGG + +T Sbjct: 591 -LSFQVKDTGIGLTEEQMSKLFQPFTQADSSTTRKYGGTGLGLAITRKFCQMMGGDIYLT 649 Query: 1001 SEPGVGSNFRFCILTTAQAPALAEADSVQ 1029 SE GVGS+F T + P A+ +S + Sbjct: 650 SEIGVGSSF------TIKLPKYAQLNSAK 672 >SYNE-PCC-01-001294 sll1888 Length = 432 Score = 182 bits (463), Expect = 5e-48 Identities = 140/463 (30%), Positives = 221/463 (47%), Gaps = 43/463 (9%) Query: 559 MGYVGSCLDITDRKQAQDILQKKLNQILLMRKISQEIRR-SLQPTLIFQTAARQVGNVFA 617 MG + T R + D L + I + I++ IRR SL I+Q A +G+ Sbjct: 1 MGQPSDLTESTLRFSSLDPLHPPV--ISQLTAIAKRIRRNSLHLPTIWQEAVDSIGSTLG 58 Query: 618 VSRCLIHNYSEATTLQVPVVAEYLGGQFTSLLAGEIAVEQAYDPTIIQGDRAMAVVDLDQ 677 VSRCL+ + + + + AE+ T+ A + E + + + + + ++ Sbjct: 59 VSRCLLLT-KDFQSRHLQIEAEFCQPTVTAFAALIVPEESEIWRQLFEQHQPITLYNVQ- 116 Query: 678 DLNSTHTKAFYQRFQVKSFLAVRTSYQGKANGIIALHQCD-RQRVWTADXXXXXXXXXXQ 736 +Q + T YQ +ANG + L Q W + Q Sbjct: 117 ----------FQGEDLGGLWIFPTLYQDQANGYLCLQQVGPAPGPWHPETEALLQELAEQ 166 Query: 737 MGIXXXXXXXXXXXXXXXXXXXXXNLELEKATWAAEAANRAKGEFLAMMSHEIRTPMNGV 796 G EL +AT AAE A+R K EFLA +HE+RTP+NG+ Sbjct: 167 TGTAIAHATLYQ--------------ELTQATKAAEEASRLKSEFLASTTHELRTPLNGI 212 Query: 797 IGMTELLI--MTDLNLQQLDYVQTIRQSGETLLTIINDILDFSKIEADKLVLETQAFELR 854 IG L++ M D ++ ++V+ QS LL +INDILD +KIEA ++ +E + + Sbjct: 213 IGFLRLILDDMADSEAEKHEFVEEAYQSALLLLNLINDILDLAKIEAGRVGIELEVVDFS 272 Query: 855 PLIETVLEMFGPIARAKHLELTYGIDPQTPARILGDQVRLRQILSNLIGNALKFTEKGEV 914 +++ P A+ K L Q P + G+Q L Q++ N++GNA+KFT +G + Sbjct: 273 EVLQATENFALPQAQNKGLSFNLTAPNQGPLLVYGNQRWLLQVMLNIVGNAIKFTHEGGI 332 Query: 915 VLTVKGEPFDPAESYHTIL--NLPHPSHRICFNLRDTGIGIPLDRQDRLFKSFSQVDSST 972 + V+ P T+L + P + ++ DTGIG+ L++Q +LFK F Q+D S Sbjct: 333 TVAVEVMP-------RTVLWEGVQKPG-LLKVSVGDTGIGVSLEQQSKLFKKFVQIDGSH 384 Query: 973 TRKYGGTGLGLVISQRLTQMMGG-VLTVTSEPGVGSNFRFCIL 1014 ++ YGGTGLGLVISQ+L + MGG V + G+GS F +L Sbjct: 385 SKAYGGTGLGLVISQKLVETMGGKVAFFSMGEGLGSTVTFTVL 427 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 180 bits (456), Expect = 3e-47 Identities = 136/387 (35%), Positives = 198/387 (51%), Gaps = 25/387 (6%) Query: 764 LEKATWAAEAANRAKGEFLAMMSHEIRTPMNGVIGMTELLIMTDLNLQQLDYVQTIRQSG 823 L +A AA+AANRAK EFLA +SHE+RTP+N +IG ++LL + I +SG Sbjct: 149 LTQAKEAADAANRAKTEFLASISHELRTPLNAIIGFSQLLHRDPSLAPHRPTLDIINRSG 208 Query: 824 ETLLTIINDILDFSKIEADKLVLETQAFELRPLIETVLEMFGPIARAKHLELTYGIDPQT 883 E LL +INDIL+ SKIEA + L + + L++ + +F A+ K L L P+ Sbjct: 209 EHLLELINDILEMSKIEAGRTTLNEKIIDCHRLLDNLQALFQLRAQEKQLLLKVERSPEV 268 Query: 884 PARILGDQVRLRQILSNLIGNALKFTEKGEVVLTVK---GEPFDPAESYHTILNLPHPSH 940 P I D +LRQ+L NL+ NA+KFT +G V L VK D + L+ Sbjct: 269 PEWIKTDGGKLRQVLINLLANAIKFTAQGGVTLKVKCLTAPQTDEGQGASIWLH------ 322 Query: 941 RICFNLRDTGIGIPLDRQDRLFKSFSQVDSSTTRKYGGTGLGLVISQRLTQMMGGVLTVT 1000 F + DTG GI D LF F+Q ++ + G GLGL ISQ+ Q+MGG + V Sbjct: 323 ---FLVSDTGPGIAAHEMDELFVPFAQTETG-LKSCQGNGLGLPISQKFVQLMGGQIQVR 378 Query: 1001 SEPGVGSNFRFCI-LTTAQAPALAEADSVQQMK-----GKQVLIVDDNETNRRILQDQCQ 1054 S+ GS F F I + AP S + ++VL+VDD +R +L+ Sbjct: 379 SKVDQGSAFFFAIPVQVMAAPKPTPETSAVTLPPLDQYNQKVLVVDDRPESRLLLRQLLT 438 Query: 1055 AWGLVCHCFTSGESALD-WFARCPDLDAAILDLQMPNMDGITLAHHLRQFAQGKDLPIIL 1113 + G V +GE A+ W + P + ++D+QMP +DG + ++ QG+ II Sbjct: 439 SLGFVVQEAENGEMAIALWESWHPQV--ILMDMQMPVLDGRSTTQKIKASPQGQHTIIIA 496 Query: 1114 LSSGLVAG--ADELSV-FQTVLNKPVR 1137 L++ G A+ LS L+KP R Sbjct: 497 LTASAFEGERAEILSAGCDDFLSKPFR 523 Score = 76.6 bits (187), Expect = 5e-16 Identities = 48/142 (33%), Positives = 78/142 (54%), Gaps = 5/142 (3%) Query: 1180 EDNATSLQPALQ----ILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYD 1235 E +A +L P Q +L+ +D ++ + Q+L +LG+ V A NG+ I E Sbjct: 404 ETSAVTLPPLDQYNQKVLVVDDRPESRLLLRQLLTSLGFVVQEAENGEMAIALWESWHPQ 463 Query: 1236 LVLMDMQMPVMDGITACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPI 1295 ++LMDMQMPV+DG + + I+ + P + I+A+TA+A G+R E L AG D ++SKP Sbjct: 464 VILMDMQMPVLDGRSTTQKIKAS-PQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPF 522 Query: 1296 SINQLRKVLQDTSALITSPQAR 1317 +L +L A+ Q + Sbjct: 523 RPEELIALLAKHLAVALPSQGQ 544 >SYNE-PCC-01-000295 sll0474 Length = 806 Score = 155 bits (392), Expect = 8e-40 Identities = 94/247 (38%), Positives = 144/247 (58%), Gaps = 18/247 (7%) Query: 774 ANRAKGEFLAMMSHEIRTPMNGVIGMTELL---IMTDLNLQQLDYVQTIRQSGETLLTII 830 A + K EFLA MSHE+RTP+N ++GM E L + LN +Q+ ++ + SG LL++I Sbjct: 414 ATQLKDEFLANMSHELRTPLNSILGMIETLQNQVYGPLNGKQVQSLEIVENSGRHLLSLI 473 Query: 831 NDILDFSKIEADKLVLETQAFELRPLIETVLEMFGPIARAKHLELTYGIDPQTPARILGD 890 NDILD SKIEA ++ L+ + L+ L A K + L+ I P P +L D Sbjct: 474 NDILDLSKIEAGRMDLDLNPTSVSALVNHSLTFVQQFAIQKQINLSSEIIPNLPD-VLVD 532 Query: 891 QVRLRQILSNLIGNALKFTEKGEVVLT----VKGEPFDPAESYHTILNLPHPSHRICFNL 946 + RL Q+L NL+ NA+KFT +G V+ +K + + ++S ++ F + Sbjct: 533 KRRLCQVLINLLNNAIKFTPEGGKVVVQADLIKEQGKENSQS----------PPQLSFTV 582 Query: 947 RDTGIGIPLDRQDRLFKSFSQVDSSTTRKYGGTGLGLVISQRLTQMMGGVLTVTSEPGVG 1006 DTGIGI DR + +F+ F Q+DS+ R+Y GTGLGL + +++ ++ GG +TVTS+ G Sbjct: 583 FDTGIGIEADRLNNIFEPFVQIDSALNRRYDGTGLGLSLVKKIVELHGGSVTVTSKLNEG 642 Query: 1007 SNFRFCI 1013 S F+ I Sbjct: 643 SRFKITI 649 >SYNE-PCC-01-002778 slr1969 Length = 750 Score = 146 bits (369), Expect = 4e-37 Identities = 132/510 (25%), Positives = 218/510 (42%), Gaps = 61/510 (11%) Query: 575 QDILQKKLNQILLMRKISQEIRRSLQPTLIFQTAARQVGNVFAVSRCLIHNYSEATTLQV 634 QD LQ +Q+ L+ ++ +IR+SL + I A V V R +I+ + + Sbjct: 151 QDSLQA--SQVKLLSQVIAQIRQSLDLSEILNNAVTAVQKFLFVDRLVIYQFHYSQPSLT 208 Query: 635 PVVAEYLGGQFTSLLAGEIAVEQAYDPTI-----------------------IQGDRAMA 671 P+ + GE+ E P I ++G +A Sbjct: 209 PLEENQIPAPRPRQQYGEVTYEARRSPEIDTMLGIMTENDCFSQVFSYEQKYLKG-AVVA 267 Query: 672 VVDLDQDLNSTHTKA-FYQRFQVKSFLAVRTSYQGKANGIIALHQCDRQRVWTADXXXXX 730 V D++ +S++ QR+QV++ L +G+ G++ HQC R W Sbjct: 268 VSDIENHYSSSYCLVGLLQRYQVRAKLVAPIIVEGQLWGLLIAHQCHHPRQWLDSEKNFL 327 Query: 731 XXXXXQMGIXXXXXXXXXXXXXXXXXXXXXNL----ELEKATWAAEAANRAKGEFLAMMS 786 + + + EL AA+AAN K +F+ +S Sbjct: 328 GQIGEHLAVAIVQSLLYSEVQKQKNNFEKRVIERTKELRDTLMAAQAANLLKSQFINNIS 387 Query: 787 HEIRTPMNGVIGMTELLI------MTDLNLQQLDYVQTIRQSGETLLTIINDILDFSKIE 840 HE+RTP+ +IG++ L+ + +Q Y+ I+++G+ LL IN I+ S++E Sbjct: 388 HELRTPLTSIIGLSATLLRWFDHPASLPPAKQQYYLLNIQENGKKLLDQINSIIQLSQLE 447 Query: 841 ADKLVLETQAFELRPLIETVLEMFGPIA--RAKHLELTYGIDPQTPARILGDQVRLRQIL 898 + + L Q+F L L +TV+ +A + +LEL Y I+ + DQ RL QIL Sbjct: 448 SGQTALNCQSFSLHTLAQTVIHSLLGVAIKQQINLELDYQINVGQD-QFCADQERLDQIL 506 Query: 899 SNLIGNALKFTEKGEVVLTVKGEPFDPAESYHTILNLPHPSHRICFNLRDTGIGIPLDRQ 958 + L+ NALKFT PAE IL + S++ F + DTGIGI + Sbjct: 507 TQLLNNALKFT---------------PAEG-TVILRIWKESNQAIFQVEDTGIGINEQQL 550 Query: 959 DRLFKSFSQVDSSTTRKYGGTGLGLVISQRLTQMMGGVLTVTSEPGVGSNFRFCI----- 1013 LF++F S T Y G+GL ++++L ++ GG + V S PG G+ F I Sbjct: 551 PVLFEAFKVAGDSYTSFYETGGVGLALTKQLVELHGGYIEVESSPGQGTIFTTVIPQQNF 610 Query: 1014 LTTAQAPALAEADSVQQMKGKQVLIVDDNE 1043 T + + D+ ++I D E Sbjct: 611 PPTTKGQVQDKLDAAMPFNSSVIVIEQDEE 640 >SYNE-PCC-01-001509 slr0210 Length = 417 Score = 127 bits (320), Expect = 2e-31 Identities = 87/231 (37%), Positives = 118/231 (51%), Gaps = 21/231 (9%) Query: 782 LAMMSHEIRTPMNGVIGMTELL---IMTDLNLQQLDYVQTIRQSGETLLTIINDILDFSK 838 L+ + HE RTP+ +IG +L + LN +Q YVQ S E LL+++ND LD SK Sbjct: 190 LSHIHHEFRTPLTAIIGFARMLRDELYGKLNPKQHQYVQGTLNSAEHLLSLVNDFLDLSK 249 Query: 839 IEADKLVLETQAFELRPLIETVLEMFGPIARAKHLELTYGIDPQTPARILGDQVRLRQIL 898 I+A L + + L V+ M A+ K L L ID + DQ R +QIL Sbjct: 250 IDARCEELFYEQVAVEDLCLAVISMVQTKAKEKQLALNLTIDDGVDFCYV-DQRRWKQIL 308 Query: 899 SNLIGNALKFTEKGEVVLTVKGEPFDPAESYHTILNLPHPSHRICFNLRDTGIGIPLDRQ 958 NL+ N +KFT KG V L VK + F++ DTGIGI + Q Sbjct: 309 INLLSNGVKFTPKGSVTLAVKAT-----------------DKALIFSVIDTGIGIDPEDQ 351 Query: 959 DRLFKSFSQVDSSTTRKYGGTGLGLVISQRLTQMMGGVLTVTSEPGVGSNF 1009 LF+ F Q+ + GTGLGL +S+RL Q+ GG + +TS PGVGS F Sbjct: 352 RDLFQPFKQISHPPSFAEKGTGLGLALSRRLAQLHGGDIQLTSTPGVGSCF 402 >SYNE-PCC-01-001517 slr0222 Length = 1178 Score = 121 bits (303), Expect = 2e-29 Identities = 77/237 (32%), Positives = 123/237 (51%), Gaps = 24/237 (10%) Query: 775 NRAKGEFLAMMSHEIRTPMNGVIGMTELLIMTDLNL---QQLDYVQTIRQSGETLLTIIN 831 N AK +F+ ++SHE RTP+ +IG ELL L ++ Y+ I+ S + L +I+ Sbjct: 937 NEAKSQFVDIVSHEFRTPLTSIIGFGELLSKYFDRLSTEKKQQYINNIQNSSQRLKQLID 996 Query: 832 DILDFSKIEADKLVLETQAFELRPLIETVLEMFGPIARAKH-LELTYGIDPQTPARILGD 890 D+L S+ +A+K+ +E LR L ++E F ++H EL Y + P + + D Sbjct: 997 DVLSISRYDANKIEIELGNINLRNLANDLIENFSCGLGSEHNFELNYHLKPDEHSLV--D 1054 Query: 891 QVRLRQILSNLIGNALKFTEKGEVVLTVKGEPFDPAESYHTILNLPHPSHRICFNLRDTG 950 LR IL N++ NA+K++ G + L++ + F +RD G Sbjct: 1055 VRLLRHILENILSNAIKYSAPGSTIT----------------LDISKDEEHLLFQVRDEG 1098 Query: 951 IGIPLDRQDRLFKSFSQVDSSTTRKYGGTGLGLVISQRLTQMMGGVLTVTSEPGVGS 1007 IGIPL Q++LF++F + +S GTGLGL I +R + GG + V S PG G+ Sbjct: 1099 IGIPLQDQEKLFEAFHR--ASNVGDIPGTGLGLSIVKRYVEFQGGTIEVISMPGKGT 1153 Score = 49.3 bits (116), Expect = 9e-08 Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 11/183 (6%) Query: 304 SKHSEQLSESIKQQQKVEEFLKSTLQELAVQKTALDEAAIVAITDTEGVITYVNDKFVEV 363 S +S+ L E I+++Q + T QE + D + + + ++ VN + VE+ Sbjct: 527 SSNSQLLQEIIEKEQVS---ITLTTQEAKYRALVRDAGDAIILITIDFIVLEVNYRAVEL 583 Query: 364 SGYSREELIGNTHRLVSSGYHSPEFFQQ---FWQTIRAGKVWH-GQINNRAKAGNTYWVD 419 SGY +EELIG H L+ +PEF+ Q FW+T++ ++ + K+G VD Sbjct: 584 SGYDQEELIG--HSLLDLRLLTPEFYAQQRHFWRTLKREQISQLTDVRLVKKSGELISVD 641 Query: 420 STVVPFLDDNGNPYQYLAIRFEITSSKQAEKSLRESEARFRMMADTSPIMLWVADQDKKM 479 + +N + Q I +IT K + L+ R + + L+V + ++ Sbjct: 642 ISASVITYENHSIVQ--CIVHDITLQKTIQAQLQRENYFRRQLLEKMVEGLFVCYEVEQF 699 Query: 480 TFV 482 F+ Sbjct: 700 PFL 702 >SYNE-PCC-01-002220 slr1212 Length = 844 Score = 105 bits (263), Expect = 8e-25 Identities = 111/434 (25%), Positives = 191/434 (44%), Gaps = 19/434 (4%) Query: 304 SKHSEQLSESIKQQQKVEEFLKSTLQELAVQKTALDEAAIVAITDT-EGVITYVNDKFVE 362 +K ++QL + I+ + + +E L+ +LA ++ + I+ T +G IT N+ Sbjct: 171 AKINQQLEQEIEDKTRAKEDLEKNKDQLAQLAAIVESSQDAIISKTLDGNITSWNESAER 230 Query: 363 VSGYSREELIGN-THRLVSSGYHSPEFFQQFWQTIRAG-KVWHGQINNRAKAGNTYWVDS 420 + GY+ EE+IG+ +L+ E + IR G ++ + + K G V Sbjct: 231 LFGYTAEEMIGSHITKLIPEELILEE--DLIAECIRQGQRINTYETQRQRKDGTKIDVAL 288 Query: 421 TVVPFLDDNGNPYQYLAIRFEITSSKQAEKSLRESEARFRMMADTSPIMLWVADQDK-KM 479 T+ P D++ N I +IT+ E +LRES+ +A+ SP +L++ D K Sbjct: 289 TISPIRDEHKNVVGASKIVRDITARLDVENALRESQYFIEKLANYSPQILYILDPIAWKN 348 Query: 480 TFVNQSWLEFRGATLAEESGNG---YLEGIHPDDKG--HYLGVYSQAFGDXXXXXXXXXX 534 +VN E G T E G L +HPDD + + Q + Sbjct: 349 IYVNYQSFEILGYTPEEFKNGGTELLLNIVHPDDIPTLYENKNFWQKSQEGQVLTTEYRM 408 Query: 535 XXVDQQYRWIVNVGVPRYLED-GKFMGYVGSCLDITDRKQAQDILQKKLNQILLMRKISQ 593 + +RW+ + V +D G+ +G+ DI+D K+ + L ++ + L+R+I+Q Sbjct: 409 RHKNGSWRWLRSREVVFARDDYGQVTKVLGTAQDISDSKEQEQRLYEQGRRESLLREITQ 468 Query: 594 EIRRSLQPTLIFQTAARQVGNVFAVSRCLIHNYSEATTLQV-PVVAEYLGGQFTSLLAG- 651 IR+SL IF T +++ R +I +S + V +VAE + F ++ Sbjct: 469 RIRQSLDLPTIFNTVVQEIRQFLEADRVVIFQFSPDSDFSVGNIVAESVLAPFKPIINSA 528 Query: 652 --EIAVEQAYDPTIIQGDRAMAVVDLDQD-LNSTHTKAFYQRFQVKSFLAVRTSYQGKAN 708 E Y QG R + D+ Q L H F R QV++ L + Sbjct: 529 IEETCFSNNYAQRYQQG-RIQVIEDIHQSHLRQCHID-FLARLQVRANLVLPLINDAILW 586 Query: 709 GIIALHQCDRQRVW 722 G++ +HQCD RVW Sbjct: 587 GLLCIHQCDSSRVW 600 >SYNE-PCC-01-000985 sll1475 Length = 297 Score = 80.5 bits (197), Expect = 3e-17 Identities = 63/255 (24%), Positives = 118/255 (46%), Gaps = 24/255 (9%) Query: 763 ELEKATWAAEAANRAKGEFLAMMSHEIRTPMNGVIGMTELLIMTDLNLQQLD----YVQT 818 E+ A + +R K F +M SHE RTP++ + +LL +++ D + Sbjct: 54 EVRLALEREKELSRLKTRFFSMASHEFRTPLSTALAAAQLLENSEVAWLDPDKRSRNLHR 113 Query: 819 IRQSGETLLTIINDILDFSKIEADKLVLETQAFELRPLIETVLEMFGPIARAKHLELTYG 878 I+ S + ++ +++DIL ++ EA KL +L+ L + +E ++ + + Sbjct: 114 IQNSVKNMVQLLDDILIINRAEAGKLEFNPNWLDLKLLFQQFIEEI-QLSVSDQYYFDFI 172 Query: 879 IDPQTPARILGDQVRLRQILSNLIGNALKFTEKGEVVLTVKGEPFDPAESYHTILNLPHP 938 Q + L D+ +R ILSNL+ NA+K++ G + + L Sbjct: 173 CSAQ-DTKALVDERLVRSILSNLLSNAIKYSPGGGQIK----------------IALSLD 215 Query: 939 SHRICFNLRDTGIGIPLDRQDRLFKSFSQVDSSTTRKYGGTGLGLVISQRLTQMMGGVLT 998 S +I F + D GIGI + Q ++F+ F + R GTGLGL+++++ + G + Sbjct: 216 SEQIIFEVTDQGIGISPEDQKQIFEPFHR--GKNVRNITGTGLGLMVAKKCVDLHSGSIL 273 Query: 999 VTSEPGVGSNFRFCI 1013 + S G+ C+ Sbjct: 274 LKSAVDQGTTVTICL 288 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 79.3 bits (194), Expect = 8e-17 Identities = 45/126 (35%), Positives = 75/126 (59%), Gaps = 4/126 (3%) Query: 1186 LQPALQILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPV 1245 ++ ++LL EDN +N+ + + L GY V IA +G++ + + L+LMDM +P+ Sbjct: 1 MESMAKVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPI 60 Query: 1246 MDGITACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQLRKVLQ 1305 +DG TA + I+ P I+A+TA+AM DR+ + AG D Y +KPI +++++LQ Sbjct: 61 IDGWTATKQIKGH-PDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPI---EIKRLLQ 116 Query: 1306 DTSALI 1311 ALI Sbjct: 117 KMEALI 122 >SYNE-PCC-01-001690 slr0473 Length = 748 Score = 79.0 bits (193), Expect = 1e-16 Identities = 64/254 (25%), Positives = 114/254 (44%), Gaps = 26/254 (10%) Query: 763 ELEKATWAAEAANRAKGEFLAMMSHEIRTPMNGVIGMTELLIMT---DLNLQQLDYVQTI 819 EL + E +N +F + SH+++ P+N V +LL M L+ D++ Sbjct: 514 ELAQLARNLERSNADLKKFAYIASHDLQEPLNQVSNYVQLLEMRYSEALDEDAKDFIDFA 573 Query: 820 RQSGETLLTIINDILDFSKIEADKLVLETQAFELRPLIETVLEMFGPIARAKHLELTYGI 879 + T+I+DIL ++K++ L +++ +++ L E+ G Sbjct: 574 VTGVSLMQTLIDDILTYAKVDTQYAQLTFT--DVQEVVDKALANLKQRIEESGAEIEVGS 631 Query: 880 DPQTPARILGDQVRLRQILSNLIGNALKFTEKGEVVLTVKGEPFDPAESYHTILNLPHPS 939 P ++ DQ++L Q+ NLI N +KF + + G+ + A Sbjct: 632 MPA----VMADQIQLMQVFQNLIANGIKFAGDKSPKIKIWGDRQEDAW------------ 675 Query: 940 HRICFNLRDTGIGIPLDRQDRLFKSFSQVDSSTTRKYGGTGLGLVISQRLTQMMGGVLTV 999 F ++D GIGI +R+F F ++ T +Y GTG+GL I +++ + G + + Sbjct: 676 ---VFAVQDNGIGIDPQFFERIFVIFQRLH--TRDEYKGTGMGLAICKKIIEGHQGQIWL 730 Query: 1000 TSEPGVGSNFRFCI 1013 S PG GS F F I Sbjct: 731 ESNPGEGSTFYFSI 744 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 64.3 bits (155), Expect = 3e-12 Identities = 56/223 (25%), Positives = 104/223 (46%), Gaps = 17/223 (7%) Query: 1177 LPTEDNATSLQPALQILLAEDNLVNQKVAHQMLNNLG-YPVAIANNGQEVIDALEKKFYD 1235 LP D T++ + +LL +D ++ L + G + V +A N E D L+ Sbjct: 43 LPLHDCITAMAEPISLLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPA 102 Query: 1236 LVLMDMQMPVMDGITACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPI 1295 LV+ D+ MP +DG + +R+ + P +V +TA M GDR + G D ++SKP Sbjct: 103 LVISDIMMPQVDGYQFLQKLREDARFQSLP-VVFLTARGMTGDRIQGYQTGCDAFLSKPF 161 Query: 1296 SINQLRKVLQDTSALITSPQARED-------IVTLGDKITVVEEQTMVKPTDVTESPLDP 1348 ++L ++++ L+ QA D + + +I ++EQ + +P+ + +P P Sbjct: 162 DPDELEAIVRN---LLARQQASSDAGSESAKLQEIYQEIRALKEQ-IGQPSGIHTTP-SP 216 Query: 1349 TAIAFLRDDLCGGDLT---LFGEMVACYCQESQKLIEELVQGL 1388 + F + DL L + +A + S + +E+ V L Sbjct: 217 IKLDFTPREQSVLDLVSQGLMNKEIAAQLKTSVRNVEKYVSRL 259 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 63.9 bits (154), Expect = 3e-12 Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 3/111 (2%) Query: 1190 LQILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGI 1249 ++ILL ED+L + + L++ Y V IA + D + YDLV++D+ +P +DGI Sbjct: 1 MRILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGI 60 Query: 1250 TACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQL 1300 T C+ R L I+ MTA D+ LDAG D Y+ KP+ + +L Sbjct: 61 TLCQKWRSHSYL---MPILMMTARDTINDKITGLDAGADDYVVKPVDLGEL 108 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 60.8 bits (146), Expect = 3e-11 Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 1/109 (0%) Query: 1192 ILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGITA 1251 ILL +D N ++ +L NLGY V +G+ + L+ K DL+L+D++MP MDG Sbjct: 11 ILLVDDLPNNLQLLSDLLINLGYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQV 70 Query: 1252 CRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQL 1300 C I++ L+ P I+ ++A D+ + + G YI+KP I ++ Sbjct: 71 CEMIKKEEELQDIP-IIFISALGDTFDKVKAFECGGVDYITKPFQIEEV 118 Score = 48.5 bits (114), Expect = 1e-07 Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 4/92 (4%) Query: 1026 DSVQQMKGKQVLIVDDNETNRRILQDQCQAWGLVCHCFTSGESALDWF-ARCPDLDAAIL 1084 ++ + KG +L+VDD N ++L D G TSG+ AL + PDL +L Sbjct: 2 ENTDEKKGN-ILLVDDLPNNLQLLSDLLINLGYTVRSVTSGKMALRTLQVKRPDL--ILL 58 Query: 1085 DLQMPNMDGITLAHHLRQFAQGKDLPIILLSS 1116 D++MP+MDG + +++ + +D+PII +S+ Sbjct: 59 DIKMPDMDGYQVCEMIKKEEELQDIPIIFISA 90 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 60.5 bits (145), Expect = 4e-11 Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 1/119 (0%) Query: 1182 NATSLQPALQILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDM 1241 N T IL+ ED+ ++ + L + + N+G+ + +++ DL+++D+ Sbjct: 4 NRTEFIAMPNILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDL 63 Query: 1242 QMPVMDGITACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQL 1300 +P +DG+ C IRQ P + P I+ +TA DR L G D Y+ KP S +L Sbjct: 64 MLPKLDGLEVCTRIRQQ-PGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPREL 121 Score = 45.1 bits (105), Expect = 2e-06 Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 12/102 (11%) Query: 1036 VLIVDDNETNRRILQDQCQAWGLVCHCFTSGESALDWFA-RCPDLDAAILDLQMPNMDGI 1094 +LIV+D++ +++++ + C GE+ L F + PDL +LDL +P +DG+ Sbjct: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDL--IVLDLMLPKLDGL 71 Query: 1095 TLAHHLRQFAQGKDLPIILLSS---------GLVAGADELSV 1127 + +RQ KD I++L++ GL GAD+ V Sbjct: 72 EVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLV 113 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 59.3 bits (142), Expect = 8e-11 Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 4/107 (3%) Query: 1194 LAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGITACR 1253 + +D +++ L+ +GY V A +G+E I + DLV++D+ MP +DG C+ Sbjct: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 Query: 1254 HIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQL 1300 +R+ E I+ +TA DR L+ G D Y+ KP S +L Sbjct: 61 ELRK----ESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKEL 103 Score = 45.4 bits (106), Expect = 1e-06 Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 13/99 (13%) Query: 1038 IVDDNETNRRILQDQCQAWGLVCHCFTSGESALDWFARCPDLDAAILDLQMPNMDGITLA 1097 +VDD + RRIL+ + G GE A+ F D D +LD+ MP +DG + Sbjct: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHES-DPDLVVLDVMMPKLDGYGVC 59 Query: 1098 HHLRQFAQGKDLPIILLS---------SGLVAGADELSV 1127 LR + D+PII+L+ +GL GAD+ V Sbjct: 60 QELR---KESDIPIIMLTALGDVADRITGLELGADDYVV 95 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 57.4 bits (137), Expect = 3e-10 Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 13/141 (9%) Query: 1190 LQILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKF--YDLVLMDMQMPVMD 1247 ++ILL ED ++L + Y V +G + D LE ++ Y L ++D +P + Sbjct: 1 MRILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLS 60 Query: 1248 GITACRHIR---QTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQLRKVL 1304 G+ C+ +R +LP ++ +TA P +R E LDAG D Y++KP + +L L Sbjct: 61 GLELCQKLRTQGNSLP------VLMLTALGEPENRVEGLDAGADDYLTKPFVMAELLARL 114 Query: 1305 QDTSALITSPQAREDIVTLGD 1325 + SPQ + I+TLG+ Sbjct: 115 RALQR--RSPQFQPQILTLGN 133 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 56.6 bits (135), Expect = 5e-10 Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 1/109 (0%) Query: 1192 ILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGITA 1251 +LL ED+ +++ +L + G+ V IA +G E ++ L+ DLV++D+ MP M+G Sbjct: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 Query: 1252 CRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQL 1300 CR I+ P + ++ ++ DR + G D YI+KP +L Sbjct: 90 CRRIKSD-PKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMEL 137 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 55.8 bits (133), Expect = 9e-10 Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 1/114 (0%) Query: 1192 ILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGITA 1251 +LL +D+ + L GY V A NG+E +D L D+++ D+ MP MDG Sbjct: 10 LLLVDDDPNLLLLVKDYLEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAF 69 Query: 1252 CRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQLRKVLQ 1305 +RQ + P ++ ++A +R + L+ G D Y++KP +L +Q Sbjct: 70 IEQVRQNPDISWIP-VMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQ 122 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 55.5 bits (132), Expect = 1e-09 Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 7/134 (5%) Query: 1192 ILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGITA 1251 ILL +D + + L + G+ + +A+ G+ + YDL+++D +P + G+ Sbjct: 4 ILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGLEI 63 Query: 1252 CRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQLRKVLQDTSALI 1311 CR IR L ++ +TA DR LDAG D Y+ KP +LR++L AL+ Sbjct: 64 CRQIR---ILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPF---ELRELLARVRALL 117 Query: 1312 TSPQAREDIV-TLG 1324 E I TLG Sbjct: 118 RRQSHGETITETLG 131 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 52.8 bits (125), Expect = 8e-09 Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 5/110 (4%) Query: 1191 QILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGIT 1250 ++LL +D++ ++ +L G+ V ANNG E + L + Y LVL+D+ MP ++GI Sbjct: 3 KLLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKLNES-YKLVLLDVMMPKLNGIE 61 Query: 1251 ACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQL 1300 + IR+ + ++ +TA DR L+ G D + KP + +L Sbjct: 62 TLKEIRKVSNVP----VMMLTARGEDIDRVLGLELGADDCLPKPFNDREL 107 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 52.4 bits (124), Expect = 1e-08 Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 4/110 (3%) Query: 1191 QILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGIT 1250 +IL+ ED +V + + GY V A NG E+ L +LV+MD+ +P +G+ Sbjct: 5 KILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGLL 64 Query: 1251 ACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQL 1300 R +R+ L L ++ +T D+ L+ G D Y++KP + +L Sbjct: 65 LARELREELSLP----LIFLTGRDNEVDKILGLEIGADDYLTKPFNPREL 110 >SYNE-PCC-01-001160 sll1708 Length = 226 Score = 51.6 bits (122), Expect = 2e-08 Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 7/126 (5%) Query: 1179 TEDNATSLQPAL--QILLAEDNLVNQKVAHQML--NNLGYPVAIANNGQEVIDALEKKFY 1234 T + ++P L +IL+ ED+ + Q Q L + + +NG + Sbjct: 4 TSPHRVKIEPCLPMKILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNP 63 Query: 1235 DLVLMDMQMPVMDGITACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKP 1294 DL++MD+ +P +DGI A + I+QT P Q IV +T++ +P + L +G D Y K Sbjct: 64 DLIVMDIGLPGLDGIEATKQIKQTSP---QIHIVVLTSHTLPNEIIAALSSGADAYCVKG 120 Query: 1295 ISINQL 1300 ++ +L Sbjct: 121 ATLERL 126 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 50.4 bits (119), Expect = 4e-08 Identities = 31/122 (25%), Positives = 64/122 (52%), Gaps = 10/122 (8%) Query: 1186 LQPALQILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEK-------KFYDLVL 1238 + P+ +IL+ ED + ++ L GY V ++G++ + L++ DL++ Sbjct: 27 IPPSHRILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLII 86 Query: 1239 MDMQMPVMDGITACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISIN 1298 +D+ +P ++G+ CR +R + P I+ ++A ++ L+ G D YI+KP S+ Sbjct: 87 LDIMLPQVNGLDVCRSLR--FGGDNTP-ILIVSAKGSEMEKVTGLEVGADDYITKPFSLK 143 Query: 1299 QL 1300 +L Sbjct: 144 EL 145 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 49.3 bits (116), Expect = 9e-08 Identities = 39/149 (26%), Positives = 75/149 (50%), Gaps = 11/149 (7%) Query: 1191 QILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGIT 1250 +IL+ +D+ + L GY V A +G + + DL+++D+ +P +DG T Sbjct: 3 RILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFT 62 Query: 1251 ACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQL----RKVLQD 1306 C+ +R+ P ++ +TA D+ + D+G D Y++KP + ++ R +L+ Sbjct: 63 VCQRLRRDERTADIP-VLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLRR 121 Query: 1307 TSALITSPQA--REDIVTLGDKITVVEEQ 1333 T + PQA +I+ G +T+V E+ Sbjct: 122 TDRI---PQAAKHSEILNQG-PLTLVPER 146 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 48.9 bits (115), Expect = 1e-07 Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 1/114 (0%) Query: 1189 ALQILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDG 1248 A +IL+ +D+ + L G+ V +A NG+E + + ++VL+D MPVMDG Sbjct: 11 AAKILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDG 70 Query: 1249 ITACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQLRK 1302 C+ + + + P ++ +T +AG Y++KPI LR+ Sbjct: 71 FACCQALMK-IYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQ 123 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 48.1 bits (113), Expect = 2e-07 Identities = 30/114 (26%), Positives = 58/114 (50%), Gaps = 4/114 (3%) Query: 1192 ILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGITA 1251 +L+ +DNL+ + L LG+ V +G+ + AL YD V++D+ +P +DG+ Sbjct: 4 LLIEDDNLIGNGLQIG-LTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLEV 62 Query: 1252 CRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQLRKVLQ 1305 + R + ++ +TA +R + L +G D Y+ KP ++ ++ LQ Sbjct: 63 LQQWRSN---HQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQ 113 >SYNE-PCC-01-001075 sll1592 Length = 226 Score = 47.0 bits (110), Expect = 4e-07 Identities = 31/123 (25%), Positives = 65/123 (52%), Gaps = 5/123 (4%) Query: 1189 ALQILLAEDN-LVNQKVAHQMLNNLGYPVA-IANNGQEVIDALEKKFYDLVLMDMQMPVM 1246 +++ILL ED+ L + ++ G VA A +G+ I + ++ +D+V++D+ +P + Sbjct: 7 SIRILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPGI 66 Query: 1247 DGITACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQLRKVLQD 1306 GI AC I++ P Q ++ +T+++ P ++A GY K ++ L ++ Sbjct: 67 GGIEACHQIKKIHP---QLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLAIRS 123 Query: 1307 TSA 1309 +A Sbjct: 124 VAA 126 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 47.0 bits (110), Expect = 4e-07 Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 2/106 (1%) Query: 1191 QILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGIT 1250 +IL+ ED +++ L+ Y V A++ + I+ + K+ L+L+D +P GI Sbjct: 4 KILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKI-KENPKLILLDWMLPGRSGIQ 62 Query: 1251 ACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPIS 1296 ++I++ P I+ +TA + D CL+AG D YI+KP S Sbjct: 63 FIQYIKKQESYAAIP-IIMLTAKSTEEDCIACLNAGADDYITKPFS 107 >SYNE-PCC-01-001575 slr0312 Length = 209 Score = 45.8 bits (107), Expect = 9e-07 Identities = 30/118 (25%), Positives = 60/118 (50%), Gaps = 5/118 (4%) Query: 1190 LQILLAEDNLVNQKVAHQMLNNLG--YPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMD 1247 +++L+A+D+ + ++ ++N +A A NG++ I E+ D+ LMD++MP ++ Sbjct: 7 IRVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPEVE 66 Query: 1248 GITACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQLRKVLQ 1305 G+ A I + + RI+ +T D L AG GY+ K ++L ++ Sbjct: 67 GVAA---ISAICAIVKFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIR 121 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 45.8 bits (107), Expect = 9e-07 Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 3/109 (2%) Query: 1191 QILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGIT 1250 ++L+ E+ + L GY V++A +G + ++ DL++++ +P M G+ Sbjct: 4 RVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLE 63 Query: 1251 ACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQ 1299 CR +R+ + + I+ +TA +R LDAG D YI KP + ++ Sbjct: 64 LCRRLRE---MGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDE 109 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 44.7 bits (104), Expect = 2e-06 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 11/116 (9%) Query: 1190 LQILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKF--YDLVLMDMQMPVMD 1247 +++LL ED + L Y V +G L++ + Y L + D +P + Sbjct: 1 MRLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLS 60 Query: 1248 GITACRHIR---QTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQL 1300 G+ C+ +R +LP I+ +TA DR E LDAG D Y+ KP + +L Sbjct: 61 GLELCQKLRGQRSSLP------ILMLTAKDQIADRVEGLDAGADDYLIKPFGMAEL 110 >SYNE-PCC-01-000983 sll1473 Length = 481 Score = 43.9 bits (102), Expect = 4e-06 Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 18/168 (10%) Query: 570 DRKQAQDILQKKLNQILLMRKISQEIRRSLQPTLIFQTAARQVGNVFAVSRCLIHNYSEA 629 +R++ + ++++ + + +I+Q IR+SL + T +V + V R LI+ + Sbjct: 28 ERRRIEISIKQQTQRERFINQITQHIRQSLNLETVLNTTVAEVKTLLQVDRVLIYRIWQD 87 Query: 630 TTLQVPVVAEYLGGQFTSLLAGEIAVEQ---AYDPTIIQGDRAMAVVDLDQDLNSTHTKA 686 T + E + + S+L + E Y +G + A+ D+DQD Sbjct: 88 GTGSA--ITESVNANYPSILGRTFSDEVFPVEYHQAYTKG-KVRAINDIDQDDIEICLAD 144 Query: 687 FYQRFQVKSFLAVRTSYQGKAN------------GIIALHQCDRQRVW 722 F ++F VKS L V +A+ G++ HQC R W Sbjct: 145 FVKQFGVKSKLVVPILQHNRASSLDNESEFPYLWGLLITHQCAFTRPW 192 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.320 0.136 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 129,545 Number of Sequences: 78 Number of extensions: 5738 Number of successful extensions: 214 Number of sequences better than 1.0e-05: 39 Number of HSP's better than 0.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 20 Number of HSP's that attempted gapping in prelim test: 56 Number of HSP's gapped (non-prelim): 87 length of query: 1462 length of database: 48,235 effective HSP length: 75 effective length of query: 1387 effective length of database: 42,385 effective search space: 58787995 effective search space used: 58787995 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 99 (42.7 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-002618 slr1760 (315 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-002618 slr1760 630 0.0 SYNE-PCC-01-001133 sll1673 188 2e-50 SYNE-PCC-01-000542 sll0821 177 5e-47 SYNE-PCC-01-002033 slr0947 78 4e-17 SYNE-PCC-01-001306 sll1905 75 3e-16 SYNE-PCC-01-001461 slr0115 73 1e-15 SYNE-PCC-01-000414 sll0649 65 2e-13 SYNE-PCC-01-002788 slr1982 63 1e-12 SYNE-PCC-01-000800 sll1228 62 2e-12 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 62 3e-12 SYNE-PCC-01-002879 slr2104 61 4e-12 SYNE-PCC-01-002086 slr1042 60 9e-12 SYNE-PCC-01-002731 slr1909 60 1e-11 SYNE-PCC-01-000242 sll0396 59 3e-11 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 57 8e-11 SYNE-PCC-01-001132 sll1672 57 1e-10 SYNE-PCC-01-002486 slr1584 56 2e-10 SYNE-PCC-01-002489 slr1588 55 2e-10 SYNE-PCC-01-002873 slr2098 55 3e-10 SYNE-PCC-01-002672 slr1837 55 3e-10 SYNE-PCC-01-001437 slr0081 55 3e-10 SYNE-PCC-01-001575 slr0312 55 4e-10 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 55 4e-10 SYNE-PCC-01-002221 slr1213 54 5e-10 SYNE-PCC-01-000523 sll0797 53 1e-09 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 53 1e-09 SYNE-PCC-01-000877 sll1330 52 3e-09 SYNE-PCC-01-000518 sll0789 50 1e-08 SYNE-PCC-01-002635 slr1783 49 2e-08 SYNE-PCC-01-002617 slr1759 49 2e-08 SYNE-PCC-01-000608 sll0921 48 5e-08 SYNE-PCC-01-001075 sll1592 47 6e-08 HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator pr... 44 7e-07 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 630 bits (1624), Expect = 0.0 Identities = 315/315 (100%), Positives = 315/315 (100%) Query: 1 MNLPQPIETAAAKILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVL 60 MNLPQPIETAAAKILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVL Sbjct: 1 MNLPQPIETAAAKILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVL 60 Query: 61 LDAVMPVMDGFACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAV 120 LDAVMPVMDGFACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAV Sbjct: 61 LDAVMPVMDGFACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAV 120 Query: 121 LRQRVKRLLYQNRLQHQLESVNQMLERLAKVDQLTQLANRRQLELFLDTEWSEAIREQYP 180 LRQRVKRLLYQNRLQHQLESVNQMLERLAKVDQLTQLANRRQLELFLDTEWSEAIREQYP Sbjct: 121 LRQRVKRLLYQNRLQHQLESVNQMLERLAKVDQLTQLANRRQLELFLDTEWSEAIREQYP 180 Query: 181 FSILLCDIDYFKNYNDHYGHQGGDDCLQQVAKALTRVVHRPKDLAARYGGEEFLIVLPNT 240 FSILLCDIDYFKNYNDHYGHQGGDDCLQQVAKALTRVVHRPKDLAARYGGEEFLIVLPNT Sbjct: 181 FSILLCDIDYFKNYNDHYGHQGGDDCLQQVAKALTRVVHRPKDLAARYGGEEFLIVLPNT 240 Query: 241 DLQGAIHIGEDIQAEITRLAIPHVQSAIADHVTLSIGCASTIPRLGSDWGKLVGAADQYL 300 DLQGAIHIGEDIQAEITRLAIPHVQSAIADHVTLSIGCASTIPRLGSDWGKLVGAADQYL Sbjct: 241 DLQGAIHIGEDIQAEITRLAIPHVQSAIADHVTLSIGCASTIPRLGSDWGKLVGAADQYL 300 Query: 301 YEAKAQGRNRLVSGR 315 YEAKAQGRNRLVSGR Sbjct: 301 YEAKAQGRNRLVSGR 315 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 188 bits (478), Expect = 2e-50 Identities = 93/189 (49%), Positives = 129/189 (68%) Query: 125 VKRLLYQNRLQHQLESVNQMLERLAKVDQLTQLANRRQLELFLDTEWSEAIREQYPFSIL 184 V+ + + R++ +L++ NQ L+ LA +D LT +ANRR+ + +L EW REQ P S++ Sbjct: 264 VRDITDRKRMELELQAANQQLQLLANIDGLTHIANRRRFDEYLAQEWQRHCREQKPLSLI 323 Query: 185 LCDIDYFKNYNDHYGHQGGDDCLQQVAKALTRVVHRPKDLAARYGGEEFLIVLPNTDLQG 244 L DIDYFK YND YGHQ GDDCLQ+VA L + R DL ARYGGEEF+IVLPNT+ Q Sbjct: 324 LVDIDYFKAYNDLYGHQKGDDCLQKVANTLVDIAKRITDLVARYGGEEFVIVLPNTNRQD 383 Query: 245 AIHIGEDIQAEITRLAIPHVQSAIADHVTLSIGCASTIPRLGSDWGKLVGAADQYLYEAK 304 A+ + E++ I LAIPH S+++ +VT+SIG +S IP +++ ADQ LY AK Sbjct: 384 ALAMAENMLQAIAALAIPHEGSSVSKYVTISIGVSSIIPMPEDTIERIISEADQALYSAK 443 Query: 305 AQGRNRLVS 313 +QGRNR ++ Sbjct: 444 SQGRNRAIA 452 Score = 65.9 bits (159), Expect = 2e-13 Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 3/141 (2%) Query: 14 ILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGFAC 73 IL+VDD L L G+ V T+G+ AL +P+++LLD MP MDG+ Sbjct: 11 ILLVDDLPNNLQLLSDLLINLGYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQV 70 Query: 74 CQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLLYQNR 133 C+ + K + ++ I+ L D +AFE G +DY+TKP + + V R+ Q Sbjct: 71 CEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQ---IEEVVARIEGQFT 127 Query: 134 LQHQLESVNQMLERLAKVDQL 154 +Q Q ++ + + + + +++ Sbjct: 128 IQRQRIALKREVRKRREAEEV 148 >SYNE-PCC-01-000542 sll0821 Length = 1276 Score = 177 bits (448), Expect = 5e-47 Identities = 90/190 (47%), Positives = 123/190 (64%), Gaps = 1/190 (0%) Query: 121 LRQRVKRLLYQNRLQHQLESVNQMLERLAKVDQLTQLANRRQLELFLDTEWSEAIREQYP 180 L +V ++Q L QLE+ N L++++ +D LTQ+ NR + L+ EW R + P Sbjct: 1072 LATQVAIAIHQGELYEQLETANIRLQQISSLDALTQVGNRYLFDSTLEREWQRLQRIREP 1131 Query: 181 FSILLCDIDYFKNYNDHYGHQGGDDCLQQVAKALTRVVHRPKDLAARYGGEEFLIVLPNT 240 ++LLCD+D+FK +ND+YGH GD CL+++A A+ +V RP DL ARYGGEEF I+L T Sbjct: 1132 LALLLCDVDFFKGFNDNYGHPAGDRCLKKIADAMAKVAKRPTDLVARYGGEEFAIILSET 1191 Query: 241 DLQGAIHIGEDIQAEITRLAIPHVQSAIADHVTLSIGCASTIPRLGSDWGKLVGAADQYL 300 L+GAI++ E +Q E+ LAIPH S HVTLSIG A P + LV AAD L Sbjct: 1192 SLEGAINVTEALQVEVANLAIPHTVSG-TGHVTLSIGIAVYTPERHINPNALVKAADLAL 1250 Query: 301 YEAKAQGRNR 310 YEAKA+GRN+ Sbjct: 1251 YEAKAKGRNQ 1260 Score = 55.5 bits (132), Expect = 2e-10 Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 16/177 (9%) Query: 141 VNQMLERLAKVDQLTQLAN----RRQLELFLDTEWSEAIREQYPFSILLCDIDYFKNYND 196 V +++ + D LTQL N RQL L L +A+ E +L+ +D FK N+ Sbjct: 423 VTRLITQQTAYDPLTQLPNWIIFNRQLTLAL----LDALYEGKMVGVLVIAMDRFKRINE 478 Query: 197 HYGHQGGDDCLQQVAKALTRVVH---RPKDLAARYGGEEFLIVLPN-TDLQGAIHIGEDI 252 +GH+ GD LQ+VA L + + L +R+ G+ F I+L +D Q I + E + Sbjct: 479 SFGHKTGDGLLQEVADRLNQKLSPLAAYSPLLSRWHGDGFTILLTQISDNQEMIPLCERL 538 Query: 253 QAEITRLAIPHVQSAIADHVTLSIGCASTIPRLGSDWGKLVGAADQYLYEAKAQGRN 309 ++ P ++T S+G ST P G L+ A+ L AK QG+N Sbjct: 539 ---LSTFQEPFFLQGQPIYLTASMG-ISTAPYDGETAESLLKFAEIALTRAKCQGKN 591 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 77.8 bits (190), Expect = 4e-17 Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 3/114 (2%) Query: 16 VVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGFACCQ 75 +VDD+ +R L L G+ V A +GEEA+ F E P++V+LD +MP +DG+ CQ Sbjct: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 Query: 76 ALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLL 129 L K P ++M+T L D A E GA DYV KP L R++ +L Sbjct: 61 ELRKESDIP---IIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVL 111 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 75.1 bits (183), Expect = 3e-16 Identities = 49/140 (35%), Positives = 72/140 (51%), Gaps = 4/140 (2%) Query: 14 ILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGFAC 73 ILVVDD + L+ EG+ T+G EAL + + +P+++LLD +MP MDG Sbjct: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQPDLILLDLMMPGMDGLEV 79 Query: 74 CQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLL---- 129 C L + Q V+ +T +++ + +AF GA+DYVTKP L RVK L Sbjct: 80 CDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVKTHLELKQ 139 Query: 130 YQNRLQHQLESVNQMLERLA 149 ++ L H L + E LA Sbjct: 140 TRDNLHHTLLEQARTAEALA 159 Score = 66.6 bits (161), Expect = 1e-13 Identities = 40/140 (28%), Positives = 75/140 (53%), Gaps = 3/140 (2%) Query: 6 PIETAAAKILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVM 65 P ++ IL+ +D+ + ++ L+K G+ V++ NG+EAL+ A+ +VVL+D M Sbjct: 734 PYSSSNLTILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEM 793 Query: 66 PVMDGFACCQALMKIY-QNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQ- 123 P MDG + + + ++ P ++ +T E +R +G DYV+KPI L+Q Sbjct: 794 PEMDGLTATEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKPIRLEALQQA 853 Query: 124 -RVKRLLYQNRLQHQLESVN 142 +V Q+ Q ++ +V+ Sbjct: 854 LQVAATALQSTSQDRMATVS 873 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 72.8 bits (177), Expect = 1e-15 Identities = 37/117 (31%), Positives = 67/117 (57%) Query: 13 KILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGFA 72 +IL++DDD + + + L+ G+ V+ A +G + +++P++++LD ++P +DGF Sbjct: 3 RILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFT 62 Query: 73 CCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLL 129 CQ L + + VLM+T L + F++GA DY+TKP + RV+ LL Sbjct: 63 VCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALL 119 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 65.5 bits (158), Expect = 2e-13 Identities = 39/128 (30%), Positives = 63/128 (49%) Query: 10 AAAKILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMD 69 A IL+V+DD + +R L++E + +GE L F E P++++LD ++P +D Sbjct: 10 AMPNILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLD 69 Query: 70 GFACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLL 129 G C + + + P +LM+T +E GA DY+ KP L RV+ LL Sbjct: 70 GLEVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRALL 129 Query: 130 YQNRLQHQ 137 + Q Q Sbjct: 130 RRQLRQGQ 137 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 63.2 bits (152), Expect = 1e-12 Identities = 35/118 (29%), Positives = 65/118 (55%) Query: 12 AKILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGF 71 AK+L+V+D+ R L L ++G+ V +A +GE+A+T P+++L+D +P++DG+ Sbjct: 5 AKVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGW 64 Query: 72 ACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLL 129 + + ++ +T + +RA AG DY TKPI L Q+++ L+ Sbjct: 65 TATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEALI 122 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 62.4 bits (150), Expect = 2e-12 Identities = 36/110 (32%), Positives = 56/110 (50%) Query: 6 PIETAAAKILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVM 65 P++ K+LVVDD R+ LR L G V+ A NGE A+ + P+V+L+D M Sbjct: 412 PLDQYNQKVLVVDDRPESRLLLRQLLTSLGFVVQEAENGEMAIALWESWHPQVILMDMQM 471 Query: 66 PVMDGFACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKP 115 PV+DG + Q + Q +++ +T E AG D+++KP Sbjct: 472 PVLDGRSTTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKP 521 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 61.6 bits (148), Expect = 3e-12 Identities = 42/118 (35%), Positives = 63/118 (53%), Gaps = 4/118 (3%) Query: 12 AKILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGF 71 +K+L+VDDD + L L+ EG VE A NG EAL K E ++VLLD +MP ++G Sbjct: 2 SKLLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKLNE-SYKLVLLDVMMPKLNGI 60 Query: 72 ACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLL 129 + + K+ P V+M+T ++ E GA D + KP + L R+K +L Sbjct: 61 ETLKEIRKVSNVP---VMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAIL 115 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 61.2 bits (147), Expect = 4e-12 Identities = 53/221 (23%), Positives = 101/221 (45%), Gaps = 15/221 (6%) Query: 12 AKILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGF 71 A IL+V+D+ R L +G RV++A NG+EALT + +L+D MP+++G+ Sbjct: 718 ASILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGY 777 Query: 72 ACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLLYQ 131 +A+ + + + ++ +T ++A +AG D++TKPI +L Q + + Sbjct: 778 DATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLFQTLAHWIPP 837 Query: 132 NRLQHQLESVNQMLERLAKVDQLTQLANRRQLELFLDTEWSEAIREQYPFSILLCDIDYF 191 N + + ++ + L+ +T + + ++ + E + ++ D + Sbjct: 838 NSAREK-KNPSSNLKADLSFSSMTGINQQIGMQYIENVELYHRLLVKFG--------DRY 888 Query: 192 KNYNDHY-GHQGGDDCLQQVAKALTRVVHRPKDLAARYGGE 231 N+ D + Q DD A TR H K AA G E Sbjct: 889 SNFADQFRTEQASDD-----PTAATRYAHSIKGAAALLGIE 924 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 60.1 bits (144), Expect = 9e-12 Identities = 35/116 (30%), Positives = 58/116 (50%) Query: 14 ILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGFAC 73 +L+V+D R + L+ G +V +A +G EAL K P++V+LD VMP M+G+ Sbjct: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 Query: 74 CQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLL 129 C+ + + + V+M + +E GA Y+ KP L +K+LL Sbjct: 90 CRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLL 145 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 59.7 bits (143), Expect = 1e-11 Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 12/143 (8%) Query: 14 ILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGFAC 73 +L+VDDD + + ++ YL+ +G++V A NG EAL P++++ D +MP MDG+A Sbjct: 10 LLLVDDDPNLLLLVKDYLEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAF 69 Query: 74 CQALMKIYQNPSPL---VLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLLY 130 + ++ QNP V+ ++ + + GA Y+ KP L +V+ L Sbjct: 70 IE---QVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLR 126 Query: 131 Q--NRLQHQLESVNQMLERLAKV 151 Q LQH N LE A+V Sbjct: 127 QADRLLQHN----NHPLEDNARV 145 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 58.5 bits (140), Expect = 3e-11 Identities = 43/180 (23%), Positives = 91/180 (50%), Gaps = 23/180 (12%) Query: 13 KILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGFA 72 ++LVV+++ + + + L+ EG+ V +A +G + T+ E P++++++ +P M G Sbjct: 4 RVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLE 63 Query: 73 CCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIH----WAVLRQRVKRL 128 C+ L ++ +++IT DD +AGA DY+ KP + +A +R +++R Sbjct: 64 LCRRLREMGSRIP--IILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRRT 121 Query: 129 ------------LYQNRLQHQLESVNQMLERLAKVDQLTQ--LANRRQL---ELFLDTEW 171 L NR +++ +++++ AK +L L++ RQ+ E L+ W Sbjct: 122 HTTSDEVLQFADLRFNRSTREIQRGDRLIDLTAKEFELLDYLLSHARQVLTREQILERVW 181 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 57.0 bits (136), Expect = 8e-11 Identities = 36/126 (28%), Positives = 67/126 (53%), Gaps = 4/126 (3%) Query: 13 KILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGFA 72 KIL+V+D+ +R + ++L ++ + V A++ + A+ K E P+++LLD ++P G Sbjct: 4 KILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKE-NPKLILLDWMLPGRSGIQ 62 Query: 73 CCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVK---RLL 129 Q + K + ++M+T E AGA DY+TKP +L R++ R + Sbjct: 63 FIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWRRI 122 Query: 130 YQNRLQ 135 Y+ + Q Sbjct: 123 YEQQSQ 128 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 56.6 bits (135), Expect = 1e-10 Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 4/105 (3%) Query: 13 KILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGFA 72 KILVVDD R L L G +E A+NG+EA+ + +P ++ +D MPVMDG+ Sbjct: 631 KILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYE 690 Query: 73 CCQALMKIYQNPSPLVLMITG--LDDEASVDRAFEAGAIDYVTKP 115 + + + + V+ +T L++E ++ AG D++ KP Sbjct: 691 ATKYIKGQVKGNATAVVALTASVLEEEKAI--VLSAGCDDFLRKP 733 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 55.8 bits (133), Expect = 2e-10 Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 4/118 (3%) Query: 13 KILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGFA 72 +IL+V+DD + L L + + V++AT+ A + ++ ++V+LD ++P +DG Sbjct: 2 RILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGIT 61 Query: 73 CCQALMK-IYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLL 129 CQ Y P +LM+T D +AGA DYV KP+ L RV+ LL Sbjct: 62 LCQKWRSHSYLMP---ILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALL 116 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 55.5 bits (132), Expect = 2e-10 Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 18/145 (12%) Query: 14 ILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEAL--TKFAEIKPEVVLLDAVMPVMDGF 71 ILVV+D+ +R + L E +++ A NG AL E+ P++++ D +MP MDG Sbjct: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 Query: 72 ACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLLYQ 131 AL K + + + +T L + +GA DY+ KP Sbjct: 64 GLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPF--------------- 108 Query: 132 NRLQHQLESVNQMLERLAKVDQLTQ 156 + + L +VN L++ AK+ Q Sbjct: 109 -KQEDLLNAVNSRLQKQAKLSAFYQ 132 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 55.1 bits (131), Expect = 3e-10 Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 5/122 (4%) Query: 13 KILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPE-----VVLLDAVMPV 67 ++LVVDD+ R+ ++ L++ VE +G EAL AE E +V +D MP Sbjct: 772 RVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPN 831 Query: 68 MDGFACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKR 127 MDG + L + N P + ++T E +A G D + KPI +VL + R Sbjct: 832 MDGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISPSVLFDSLAR 891 Query: 128 LL 129 +L Sbjct: 892 VL 893 Score = 48.5 bits (114), Expect = 3e-08 Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 8/109 (7%) Query: 12 AKILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGF 71 A+IL+V+D+ + L+ G V++A NG AL + +VL+D MP MDG Sbjct: 925 ARILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGI 984 Query: 72 ACCQALMKIYQNPS----PLVLMITGLDDEASVDRAFEAGAIDYVTKPI 116 +A + I QNP P+V M + + +R +AG D++ KPI Sbjct: 985 ---EATIAIRQNPRYAQLPIVAMTANV-MQGDRERCLQAGMNDHLGKPI 1029 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 55.1 bits (131), Expect = 3e-10 Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 5/134 (3%) Query: 12 AKILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGF 71 A IL+VDD+ + L L +GH +++A G+ L + ++++LD ++P + G Sbjct: 2 ANILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGL 61 Query: 72 ACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLLYQ 131 C+ + +I + +P VL +T D +AG DY+ KP L RV+ LL Sbjct: 62 EICRQI-RILGHSTP-VLFLTAKDTLDDRVAGLDAGGDDYLIKPFELRELLARVRALL-- 117 Query: 132 NRLQHQLESVNQML 145 R Q E++ + L Sbjct: 118 -RRQSHGETITETL 130 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 55.1 bits (131), Expect = 3e-10 Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 9/129 (6%) Query: 13 KILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKP-------EVVLLDAVM 65 +ILVV+D+ +R + + LQ+EG+ V +G +AL E ++++LD ++ Sbjct: 32 RILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIML 91 Query: 66 PVMDGFACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRV 125 P ++G C++L + + +L+++ E E GA DY+TKP L R Sbjct: 92 PQVNGLDVCRSLR--FGGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARC 149 Query: 126 KRLLYQNRL 134 + ++ + L Sbjct: 150 RAMIRRQGL 158 >SYNE-PCC-01-001575 slr0312 Length = 209 Score = 54.7 bits (130), Expect = 4e-10 Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 4/109 (3%) Query: 8 ETAAAKILVVDDDGFMRMQLRVYLQKEGHR--VELATNGEEALTKFAEIKPEVVLLDAVM 65 + ++L+ DD R L + ++ + A NGE+A+ F E +P+V L+D M Sbjct: 3 QATTIRVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRM 62 Query: 66 PVMDGFACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTK 114 P ++G A A+ I + ++++T D + + R +AGA Y+ K Sbjct: 63 PEVEGVAAISAICAIVK--FARIIVLTTYDSDEDIYRGLQAGAKGYLLK 109 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 54.7 bits (130), Expect = 4e-10 Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 4/125 (3%) Query: 13 KILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGFA 72 KILVV+D+ R L+ + EG+ V A NG E A +V++D +P +G Sbjct: 5 KILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGLL 64 Query: 73 CCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLLYQN 132 + L + P ++ +TG D+E E GA DY+TKP + L R + LL++ Sbjct: 65 LARELREELSLP---LIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHR- 120 Query: 133 RLQHQ 137 + HQ Sbjct: 121 AMPHQ 125 >SYNE-PCC-01-002221 slr1213 Length = 241 Score = 54.3 bits (129), Expect = 5e-10 Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 5/129 (3%) Query: 13 KILVVDDDGFMRMQLRVYLQKEGHRV-ELATNGEEALTKFAEIKPEVVLLD-AVMPVMDG 70 KIL+V+D+ + + L+ +G+ + +A++G AL K AE P++VLLD + +DG Sbjct: 4 KILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEIDG 63 Query: 71 FACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLLY 130 + + +Y P ++ +T D +++RA + YV KP L V + Sbjct: 64 IEVAERIKSLYSIP---IVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTVAIAIA 120 Query: 131 QNRLQHQLE 139 ++ Q + E Sbjct: 121 NHQQQRKPE 129 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 52.8 bits (125), Expect = 1e-09 Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 4/118 (3%) Query: 13 KILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVL--LDAVMPVMDG 70 +IL+V+D+ + M ++ L E + V+ T+G +A E L +D ++P + G Sbjct: 2 RILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSG 61 Query: 71 FACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRL 128 CQ L Q S VLM+T L + + +AGA DY+TKP A L R++ L Sbjct: 62 LELCQKLRT--QGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAELLARLRAL 117 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 52.8 bits (125), Expect = 1e-09 Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 2/117 (1%) Query: 13 KILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGFA 72 +IL+++DD + L++ L K G V+ T+G+ + + V+LD +P +DG Sbjct: 2 RILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLE 61 Query: 73 CCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLL 129 Q +Q+ VL++T D + ++GA DY+ KP A + R++ L+ Sbjct: 62 VLQQWRSNHQDVP--VLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALI 116 >SYNE-PCC-01-000877 sll1330 Length = 250 Score = 51.6 bits (122), Expect = 3e-09 Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 3/120 (2%) Query: 14 ILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGFAC 73 I VV+ + +R L +LQ+ G+ V+ + +A F P + ++D+ + DG Sbjct: 6 ISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGDGIEL 65 Query: 74 CQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLLYQNR 133 C+ L YQ ++ +++ D E + +AGA DY+TKP R++ L+ + R Sbjct: 66 CRWL---YQQHQSMIFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRRVR 122 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 49.7 bits (117), Expect = 1e-08 Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 5/134 (3%) Query: 13 KILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAE--IKPEVVLLDAVMPVMDG 70 ++L+V+D+ + M L L++E + V+ +G A + + + + + D ++P + G Sbjct: 2 RLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSG 61 Query: 71 FACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLLY 130 CQ L Q S +LM+T D A +AGA DY+ KP A L R++ L Sbjct: 62 LELCQKLRG--QRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAELLARLRSLQR 119 Query: 131 QN-RLQHQLESVNQ 143 ++ LQ Q V Q Sbjct: 120 RSPELQPQQLQVGQ 133 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 48.9 bits (115), Expect = 2e-08 Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 1/136 (0%) Query: 14 ILVVDDDGFMRMQLRVYLQKEGH-RVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGFA 72 +L+VDD+ +R ++ +L+ G +V+LA N EA P +V+ D +MP +DG+ Sbjct: 58 LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGYQ 117 Query: 73 CCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLLYQN 132 Q L + + S V+ +T + ++ G +++KP L V+ LL + Sbjct: 118 FLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLARQ 177 Query: 133 RLQHQLESVNQMLERL 148 + S + L+ + Sbjct: 178 QASSDAGSESAKLQEI 193 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 48.9 bits (115), Expect = 2e-08 Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 1/114 (0%) Query: 11 AAKILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDG 70 A +IL+ +D+ + L G+ V +A NG+E + + ++VL+D MPVMDG Sbjct: 1189 ALQILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDG 1248 Query: 71 FACCQALMK-IYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQ 123 C+ + + + P ++ +T +AG Y++KPI LR+ Sbjct: 1249 ITACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQLRK 1302 Score = 40.4 bits (93), Expect = 7e-06 Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 5/93 (5%) Query: 13 KILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKP-EVVLLDAVMPVMDGF 71 ++L+VDD+ R L+ Q G T+GE AL FA + +LD MP MDG Sbjct: 1035 QVLIVDDNETNRRILQDQCQAWGLVCHCFTSGESALDWFARCPDLDAAILDLQMPNMDGI 1094 Query: 72 ACCQALMKIYQNPS-PLVLMITGL---DDEASV 100 L + Q P++L+ +GL DE SV Sbjct: 1095 TLAHHLRQFAQGKDLPIILLSSGLVAGADELSV 1127 >SYNE-PCC-01-000608 sll0921 Length = 222 Score = 47.8 bits (112), Expect = 5e-08 Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 2/116 (1%) Query: 13 KILVVDDDGFMRMQLRVYLQKEG--HRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDG 70 +I +++D+ +R L+ L E V A NG L + +P+VV++D +P M+G Sbjct: 5 RIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNG 64 Query: 71 FACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVK 126 Q L K N V+++T D E +V AF AGA Y K +L + ++ Sbjct: 65 IDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQ 120 >SYNE-PCC-01-001075 sll1592 Length = 226 Score = 47.4 bits (111), Expect = 6e-08 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 6/113 (5%) Query: 7 IETAAAKILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPE---VVLLDA 63 I + +IL+V+DD R+ L L +E +++A E+ T A + + VV+LD Sbjct: 3 ISPTSIRILLVEDDELFRLGLVTRLSQEPG-LDVAGEAEDGETAIAYVNQQLFDVVILDV 61 Query: 64 VMPVMDGFACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPI 116 +P + G C + KI+ P VL++T A ++R EA A Y K + Sbjct: 62 GLPGIGGIEACHQIKKIH--PQLPVLILTSHSQPALINRLIEAQAQGYCVKGV 112 >HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator protein (narP) Length = 208 Score = 43.9 bits (102), Expect = 7e-07 Identities = 35/150 (23%), Positives = 72/150 (48%), Gaps = 5/150 (3%) Query: 13 KILVVDDDGFMRMQLRVYLQKEGHRVELA--TNGEEALTKFAEIKPEVVLLDAVMPVMDG 70 K+L++DD MR ++ ++ + + +A ++G E ++ + P+V++LD M + G Sbjct: 6 KVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLSG 65 Query: 71 FACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLLY 130 + L + +L++T D + + +AGA Y+ K L +++KR+ Sbjct: 66 LDTLKGLRA--EGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRIA- 122 Query: 131 QNRLQHQLESVNQMLERLAKVDQLTQLANR 160 Q + N +LER + + L L +R Sbjct: 123 QGEVILSDSIKNLLLERTHEDNPLDSLTDR 152 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.322 0.138 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 28,246 Number of Sequences: 78 Number of extensions: 1170 Number of successful extensions: 65 Number of sequences better than 1.0e-05: 33 Number of HSP's better than 0.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 20 Number of HSP's gapped (non-prelim): 38 length of query: 315 length of database: 48,235 effective HSP length: 63 effective length of query: 252 effective length of database: 43,321 effective search space: 10916892 effective search space used: 10916892 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 92 (40.0 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-002635 slr1783 (282 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-002635 slr1783 556 e-161 SYNE-PCC-01-002731 slr1909 147 4e-38 SYNE-PCC-01-001461 slr0115 93 8e-22 SYNE-PCC-01-002086 slr1042 91 5e-21 SYNE-PCC-01-002033 slr0947 87 5e-20 SYNE-PCC-01-002873 slr2098 77 5e-17 SYNE-PCC-01-002486 slr1584 77 5e-17 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 74 4e-16 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 74 4e-16 SYNE-PCC-01-002489 slr1588 74 7e-16 SYNE-PCC-01-000414 sll0649 72 2e-15 SYNE-PCC-01-001575 slr0312 72 3e-15 SYNE-PCC-01-000523 sll0797 71 4e-15 SYNE-PCC-01-000518 sll0789 70 6e-15 SYNE-PCC-01-001306 sll1905 70 1e-14 SYNE-PCC-01-001133 sll1673 70 1e-14 SYNE-PCC-01-000800 sll1228 70 1e-14 SYNE-PCC-01-002879 slr2104 68 4e-14 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 67 5e-14 HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator pr... 65 3e-13 SYNE-PCC-01-002617 slr1759 64 4e-13 SYNE-PCC-01-002672 slr1837 63 9e-13 SYNE-PCC-01-001437 slr0081 63 9e-13 SYNE-PCC-01-002951 ssl0564 60 1e-11 SYNE-PCC-01-000242 sll0396 60 1e-11 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 60 1e-11 SYNE-PCC-01-001132 sll1672 55 2e-10 SYNE-PCC-01-002788 slr1982 52 2e-09 SYNE-PCC-01-002618 slr1760 49 2e-08 SYNE-PCC-01-000877 sll1330 46 2e-07 SYNE-PCC-01-001075 sll1592 42 2e-06 SYNE-PCC-01-001039 sll1544 41 5e-06 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 556 bits (1433), Expect = e-161 Identities = 282/282 (100%), Positives = 282/282 (100%) Query: 1 MGLSLLRPRLVFLEFIPRDRLMGGGISQSGNLLRSPPTKPPYLPLHDCITAMAEPISLLL 60 MGLSLLRPRLVFLEFIPRDRLMGGGISQSGNLLRSPPTKPPYLPLHDCITAMAEPISLLL Sbjct: 1 MGLSLLRPRLVFLEFIPRDRLMGGGISQSGNLLRSPPTKPPYLPLHDCITAMAEPISLLL 60 Query: 61 VDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGYQFLQ 120 VDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGYQFLQ Sbjct: 61 VDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGYQFLQ 120 Query: 121 KLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLARQQAS 180 KLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLARQQAS Sbjct: 121 KLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLARQQAS 180 Query: 181 SDAGSESAKLQEIYQEIRALKEQIGQPSGIHTTPSPIKLDFTPREQSVLDLVSQGLMNKE 240 SDAGSESAKLQEIYQEIRALKEQIGQPSGIHTTPSPIKLDFTPREQSVLDLVSQGLMNKE Sbjct: 181 SDAGSESAKLQEIYQEIRALKEQIGQPSGIHTTPSPIKLDFTPREQSVLDLVSQGLMNKE 240 Query: 241 IAAQLKTSVRNVEKYVSRLFTKTGTNSRTELVRFALQHGLTE 282 IAAQLKTSVRNVEKYVSRLFTKTGTNSRTELVRFALQHGLTE Sbjct: 241 IAAQLKTSVRNVEKYVSRLFTKTGTNSRTELVRFALQHGLTE 282 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 147 bits (371), Expect = 4e-38 Identities = 84/227 (37%), Positives = 136/227 (59%), Gaps = 20/227 (8%) Query: 54 EPISLLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQV 113 E LLLVDD+P + V+ +LE G ++V A N EA D L +P +++ DIMMP++ Sbjct: 6 ENYHLLLVDDDPNLLLLVKDYLEYQG-YQVTTAGNGREALDLLTTTVPDMIVCDIMMPEM 64 Query: 114 DGYQFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNL 173 DGY F++++R++ +PV+FL+A+G + +R++G G D +++KPF+P+EL A V++ Sbjct: 65 DGYAFIEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSC 124 Query: 174 LARQQASSDAGSESAKLQEIYQEIRALKEQIGQPSGIHTTPSPIKLDFTPREQSVLDLVS 233 L +QA + L++ + Q+ + ++ TP E V+ LV+ Sbjct: 125 L--RQADRLLQHNNHPLED------NARVQVAR-----------DVELTPTETKVIQLVA 165 Query: 234 QGLMNKEIAAQLKTSVRNVEKYVSRLFTKTGTNSRTELVRFALQHGL 280 QGL N+EIA LK S R VE +VS + KTG ++RTEL R+A+Q + Sbjct: 166 QGLANREIADHLKVSQRTVESHVSNMLNKTGLHNRTELARWAIQKSI 212 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 93.2 bits (230), Expect = 8e-22 Identities = 50/135 (37%), Positives = 77/135 (57%), Gaps = 1/135 (0%) Query: 58 LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGYQ 117 +L++DD+P + + V LE +G + V A + + P L++ D+M+P+VDG+ Sbjct: 4 ILIIDDDPAISDLVSINLEMAG-YDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFT 62 Query: 118 FLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLARQ 177 Q+LR D R +PV+ LTA G D+IQG+ +G D +L+KPFD +E+ A VR LL R Sbjct: 63 VCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLRRT 122 Query: 178 QASSDAGSESAKLQE 192 A S L + Sbjct: 123 DRIPQAAKHSEILNQ 137 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 90.5 bits (223), Expect = 5e-21 Identities = 42/118 (35%), Positives = 77/118 (65%), Gaps = 1/118 (0%) Query: 57 SLLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGY 116 ++LLV+D RE + L+D G ++V +A + EA + LQ+ P LV+ DI+MP+++GY Sbjct: 29 AVLLVEDSSSQREMISGILKDHG-WQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGY 87 Query: 117 QFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLL 174 + ++++ D + +++PV+ +++G DR G + G DA+++KPF P EL ++ LL Sbjct: 88 EVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLL 145 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 87.4 bits (215), Expect = 5e-20 Identities = 50/134 (37%), Positives = 78/134 (58%), Gaps = 4/134 (2%) Query: 60 LVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGYQFL 119 +VDDE +R ++ L G ++V AA+ EA P LV+ D+MMP++DGY Sbjct: 1 MVDDEASIRRILETRLSMIG-YEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVC 59 Query: 120 QKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLARQQA 179 Q+LR+++ +P++ LTA G DRI G + G D ++ KPF P ELEA +R++L R Sbjct: 60 QELRKES---DIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDK 116 Query: 180 SSDAGSESAKLQEI 193 + G S+ + +I Sbjct: 117 NGMPGIPSSGVLQI 130 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 77.4 bits (189), Expect = 5e-17 Identities = 43/109 (39%), Positives = 65/109 (59%), Gaps = 1/109 (0%) Query: 58 LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGYQ 117 +LLV+D +E L D G F VD+AAN A + L ++ ALV+ D+ MP++DG + Sbjct: 927 ILLVEDNEINQEVAAELLRDVG-FNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIE 985 Query: 118 FLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDEL 166 +R++ R+ LP+V +TA M GDR + Q G + L KP +P+EL Sbjct: 986 ATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEEL 1034 Score = 44.3 bits (103), Expect = 4e-07 Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 27/197 (13%) Query: 58 LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYL-----QHHLPALVISDIMMPQ 112 +L+VDD R ++ LE F V+ + EA ++L ++H ++V D MP Sbjct: 773 VLVVDDNDHARLVMKDLLEQM-KFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPN 831 Query: 113 VDGYQFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRN 172 +DG + ++L+ + +TA G ++ G D L KP P +++ + Sbjct: 832 MDGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISP----SVLFD 887 Query: 173 LLARQQASSDAGSESAKLQEIYQEIRALKEQIGQPSGIHTTPSPIKLDFTPREQSVLDLV 232 LAR + + AL +++ Q SGI ++ R +L LV Sbjct: 888 SLAR----------------VLGDPTALAQEMRQSSGIGAEDLALEKLRRIRGARIL-LV 930 Query: 233 SQGLMNKEIAAQLKTSV 249 +N+E+AA+L V Sbjct: 931 EDNEINQEVAAELLRDV 947 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 77.4 bits (189), Expect = 5e-17 Identities = 46/119 (38%), Positives = 68/119 (57%), Gaps = 3/119 (2%) Query: 58 LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGYQ 117 +LLV+D+ + E++ L D + VD+A +A+ AWDY LVI D+M+P++DG Sbjct: 3 ILLVEDDLPLAETLAEALSDQL-YTVDIATDASLAWDYASRLEYDLVILDVMLPELDGIT 61 Query: 118 FLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLAR 176 QK R + +P++ +TAR D+I G G D ++ KP D EL A VR LL R Sbjct: 62 LCQKWRSHSYL--MPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRR 118 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 74.3 bits (181), Expect = 4e-16 Identities = 46/119 (38%), Positives = 67/119 (56%), Gaps = 4/119 (3%) Query: 58 LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGYQ 117 +L+V+DE R +++ E G + V A N E L +H LV+ DI +P +G Sbjct: 6 ILVVEDEIVTRNTLKGIFEAEG-YDVFEAENGVEMHHILANHNINLVVMDINLPGKNGLL 64 Query: 118 FLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLAR 176 ++LRE+ SLP++FLT R D+I G + G D +L+KPF+P EL RNLL R Sbjct: 65 LARELREEL---SLPLIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHR 120 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 74.3 bits (181), Expect = 4e-16 Identities = 48/125 (38%), Positives = 73/125 (58%), Gaps = 5/125 (4%) Query: 58 LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGYQ 117 LLLVDD+ + E + LE G F V+ A N EA L LV+ D+MMP+++G + Sbjct: 4 LLLVDDDIELTELLSTLLELEG-FDVETANNGLEALQKLNESYK-LVLLDVMMPKLNGIE 61 Query: 118 FLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLARQ 177 L+++R + ++PV+ LTARG DR+ G + G D L KPF+ EL A ++ +L R Sbjct: 62 TLKEIR---KVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRRS 118 Query: 178 QASSD 182 + S+ Sbjct: 119 ASPSN 123 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 73.6 bits (179), Expect = 7e-16 Identities = 60/200 (30%), Positives = 99/200 (49%), Gaps = 21/200 (10%) Query: 57 SLLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQ--HHLPALVISDIMMPQVD 114 ++L+V+DE +RE + L ++K+ A N A L +P L+I D+MMP++D Sbjct: 3 TILVVEDEAIIRELIGETLSLE-NYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMD 61 Query: 115 GYQFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLL 174 G+ + L+++A+ ++P +FLTA G D +G +G D +L KPF ++L V + L Sbjct: 62 GHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSRL 121 Query: 175 ARQQASSDAGSESAKLQEIYQ-EIRALKEQIGQPSGIHTTPSPIKLDFTPREQSVLDLVS 233 +Q AKL YQ I + + + SG TP+ TP E + + Sbjct: 122 QKQ----------AKLSAFYQGSISSSLTERPRRSGTIGTPT-----LTPDEAEIWRDLE 166 Query: 234 QGLMNKEIAA--QLKTSVRN 251 GL ++ Q K S+ N Sbjct: 167 VGLNTGQVFLFYQPKVSIHN 186 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 72.4 bits (176), Expect = 2e-15 Identities = 40/121 (33%), Positives = 67/121 (55%), Gaps = 1/121 (0%) Query: 57 SLLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGY 116 ++L+V+D+ + + ++ LE F + + Q +P L++ D+M+P++DG Sbjct: 13 NILIVEDDQEIAQLIRETLERE-QFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGL 71 Query: 117 QFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLAR 176 + ++R+ + ++ LTA+G DRI G TG D +L KPF P EL A VR LL R Sbjct: 72 EVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRALLRR 131 Query: 177 Q 177 Q Sbjct: 132 Q 132 >SYNE-PCC-01-001575 slr0312 Length = 209 Score = 71.6 bits (174), Expect = 3e-15 Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 29/232 (12%) Query: 51 AMAEPISLLLVDDEPGVRESVQAFLEDSGDFKVDLAA-NATEAWDYLQHHLPALVISDIM 109 + A I +L+ DD R+ + + D +V A N +A + H P + + D+ Sbjct: 2 SQATTIRVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLR 61 Query: 110 MPQVDGYQFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAI 169 MP+V+G + + +F ++ LT D +G Q G +L K +PDEL Sbjct: 62 MPEVEGVAAISAICAIVKFAR--IIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNA 119 Query: 170 VRNLLARQQ-ASSDAGSESAKLQEIYQEIRALKEQIGQPSGIHTTPSPIKLDFTPREQSV 228 +R + Q+ D G++ L +++ P + + RE V Sbjct: 120 IRTVHRGQKYIPPDVGAK-------------LVQRLSNP------------ELSERELEV 154 Query: 229 LDLVSQGLMNKEIAAQLKTSVRNVEKYVSRLFTKTGTNSRTELVRFALQHGL 280 L ++QG+ N +IA L V+ +V+R+ K RT+ V A++ G+ Sbjct: 155 LGSLAQGMSNADIATALSIGEGTVKSHVNRILNKLDVGDRTQAVIVAVKRGI 206 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 70.9 bits (172), Expect = 4e-15 Identities = 45/121 (37%), Positives = 68/121 (56%), Gaps = 5/121 (4%) Query: 58 LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLP--ALVISDIMMPQVDG 115 +LLV+DE + +++ L S + VD + ++AWDYL++ L I D ++P + G Sbjct: 3 ILLVEDETDLGMAIKKVLV-SEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSG 61 Query: 116 YQFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLA 175 + QKLR SLPV+ LTA G +R++G G D +L+KPF EL A +R L Sbjct: 62 LELCQKLRTQGN--SLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAELLARLRALQR 119 Query: 176 R 176 R Sbjct: 120 R 120 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 70.5 bits (171), Expect = 6e-15 Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 37/220 (16%) Query: 58 LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLP--ALVISDIMMPQVDG 115 LLLV+DEP + +++ L ++ VD + AW YL L I D M+P + G Sbjct: 3 LLLVEDEPDLGMALEKALRRE-NYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSG 61 Query: 116 YQFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLA 175 + QKLR + SLP++ LTA+ DR++G G D +L KPF EL A +R+L Sbjct: 62 LELCQKLR--GQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAELLARLRSLQR 119 Query: 176 RQQASSDAGSESAKLQEIYQEIRALKEQIGQPSGIHTTPSPIKLDFTPREQSVLD----- 230 R S +LQ Q+++ + + + TP ++ T +E +L+ Sbjct: 120 R----------SPELQP--QQLQVGQWWLDYGTFAVVTPEQARITLTAKEFQLLEYFMKH 167 Query: 231 ----LVSQGLMNK-----------EIAAQLKTSVRNVEKY 255 L S+ + N+ +AAQ++ R +E+Y Sbjct: 168 PQQILSSEQIKNQLWALSAESTSNVVAAQVRLLRRKLEEY 207 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 69.7 bits (169), Expect = 1e-14 Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 1/138 (0%) Query: 41 PYLPLHDCITAMAEPISLLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHL 100 P P T E +L+VDD + LE G + + EA + Sbjct: 3 PSQPHPPIATFEPESFLILVVDDVKENIYVISELLEGEG-YSTTFVTSGPEALQRVTQAQ 61 Query: 101 PALVISDIMMPQVDGYQFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKP 160 P L++ D+MMP +DG + +L++D + + +PV+FLTA D +Q + G +++KP Sbjct: 62 PDLILLDLMMPGMDGLEVCDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKP 121 Query: 161 FDPDELEAIVRNLLARQQ 178 F P EL A V+ L +Q Sbjct: 122 FSPPELLARVKTHLELKQ 139 Score = 48.5 bits (114), Expect = 2e-08 Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 7/150 (4%) Query: 38 TKPPYLPLHDCITAMAEPIS-----LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEA 92 T+PP L + I+ P S +LL +D ++ + L+ G + VD+ N EA Sbjct: 717 TEPPTLVSTEAISGPLFPYSSSNLTILLAEDNLINQQVAKLLLKKLG-YPVDVVNNGQEA 775 Query: 93 WDYLQHHLPALVISDIMMPQVDGYQFLQKLREDARFQSLP-VVFLTARGMTGDRIQGYQT 151 L +V+ D+ MP++DG + +R P ++ +TA M GDR + + Sbjct: 776 LSALAKGDYDVVLMDVEMPEMDGLTATEHIRRSQGRSERPWIIAVTAYSMEGDRERCLAS 835 Query: 152 GCDAFLSKPFDPDELEAIVRNLLARQQASS 181 G + ++SKP + L+ ++ Q++S Sbjct: 836 GMNDYVSKPIRLEALQQALQVAATALQSTS 865 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 69.7 bits (169), Expect = 1e-14 Identities = 42/151 (27%), Positives = 78/151 (51%), Gaps = 4/151 (2%) Query: 57 SLLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGY 116 ++LLVDD P + + L + G + V + A LQ P L++ DI MP +DGY Sbjct: 10 NILLVDDLPNNLQLLSDLLINLG-YTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGY 68 Query: 117 QFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLAR 176 Q + ++++ Q +P++F++A G T D+++ ++ G +++KPF +E+ A + Sbjct: 69 QVCEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQIEEVVARIEGQFTI 128 Query: 177 QQASSDAGSESAK---LQEIYQEIRALKEQI 204 Q+ E K +E+ + RAL + Sbjct: 129 QRQRIALKREVRKRREAEEVLYQSRALLSSV 159 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 69.7 bits (169), Expect = 1e-14 Identities = 42/118 (35%), Positives = 62/118 (52%), Gaps = 1/118 (0%) Query: 58 LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGYQ 117 +L+VDD P R ++ L G F V A N A + P +++ D+ MP +DG Sbjct: 420 VLVVDDRPESRLLLRQLLTSLG-FVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRS 478 Query: 118 FLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLA 175 QK++ + Q ++ LTA G+R + GCD FLSKPF P+EL A++ LA Sbjct: 479 TTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIALLAKHLA 536 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 67.8 bits (164), Expect = 4e-14 Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 2/153 (1%) Query: 54 EPISLLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQV 113 E S+LLV+D RE L G +V +A N EA L + ++ DI MP + Sbjct: 716 EGASILLVEDNEINREFAHDLLTSKG-LRVQVANNGQEALTLLTSNTYDAILMDIQMPML 774 Query: 114 DGYQFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNL 173 +GY + +R+ ++LP++ +TA M GD+ + G + L+KP PD L + + Sbjct: 775 NGYDATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLFQTLAHW 834 Query: 174 LARQQASSDAG-SESAKLQEIYQEIRALKEQIG 205 + A S + K + + + +QIG Sbjct: 835 IPPNSAREKKNPSSNLKADLSFSSMTGINQQIG 867 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 67.4 bits (163), Expect = 5e-14 Identities = 55/223 (24%), Positives = 103/223 (46%), Gaps = 18/223 (8%) Query: 58 LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGYQ 117 +L+V+DE +RE + FL + V A++ A + ++ + P L++ D M+P G Q Sbjct: 5 ILIVEDECAIREMIALFLSQKY-YDVIEASDFKTAINKIKEN-PKLILLDWMLPGRSGIQ 62 Query: 118 FLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLAR- 176 F+Q +++ + ++P++ LTA+ D I G D +++KPF P L A + + R Sbjct: 63 FIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWRRI 122 Query: 177 -QQASSDAGSESAKLQEIYQEIRALKEQIGQPSGIHTTPSPIKLDFTPREQSVLDLVSQG 235 +Q S + + E Q + +++I + +T + F + V + Sbjct: 123 YEQQSQFIQIDELSIDENAQRVFFQQQEI----NLSSTEFKLLHFFMRHPEKVYS--REQ 176 Query: 236 LMNKEIAAQLKTSVRNVEKYVSRLFTKTGTNSRTELVRFALQH 278 L+N+ L+ R V+ Y+ RL R L F +H Sbjct: 177 LLNRIWHNDLEVEYRTVDSYIRRL--------RRNLAPFQCEH 211 >HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator protein (narP) Length = 208 Score = 64.7 bits (156), Expect = 3e-13 Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 29/221 (13%) Query: 52 MAEPISLLLVDDEPGVRESVQAFLEDSGDFKVDL-AANATEAWDYLQHHLPALVISDIMM 110 M + + +LL+DD P +R ++ +E +F+V ++ TE P ++I D+ M Sbjct: 1 MQDKLKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNM 60 Query: 111 PQVDGYQFLQKLRE---DARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELE 167 + G L+ LR DAR ++ LT D G D +L K +PD L Sbjct: 61 KGLSGLDTLKGLRAEGVDAR-----ILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLL 115 Query: 168 AIVRNLLARQQASSDAGSESAKLQEIYQEIRALKEQIGQPSGIHTTPSPIKLDFTPREQS 227 ++ + + SD+ ++ L+ +++ +P+ T RE Sbjct: 116 EQIKRIAQGEVILSDS-IKNLLLERTHED------------------NPLD-SLTDREMG 155 Query: 228 VLDLVSQGLMNKEIAAQLKTSVRNVEKYVSRLFTKTGTNSR 268 VL ++ GL NK+IAAQL S V+ ++ L K +SR Sbjct: 156 VLRQIATGLSNKQIAAQLFISEETVKVHIRNLLRKLNVHSR 196 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 64.3 bits (155), Expect = 4e-13 Identities = 56/223 (25%), Positives = 104/223 (46%), Gaps = 17/223 (7%) Query: 43 LPLHDCITAMAEPISLLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPA 102 LP D T++ + +LL +D ++ L + G + V +A N E D L+ Sbjct: 1177 LPTEDNATSLQPALQILLAEDNLVNQKVAHQMLNNLG-YPVAIANNGQEVIDALEKKFYD 1235 Query: 103 LVISDIMMPQVDGYQFLQKLREDARFQSLP-VVFLTARGMTGDRIQGYQTGCDAFLSKPF 161 LV+ D+ MP +DG + +R+ + P +V +TA M GDR + G D ++SKP Sbjct: 1236 LVLMDMQMPVMDGITACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPI 1295 Query: 162 DPDELEAIVRN---LLARQQASSDAGSESAKLQEIYQEIRALKEQ-IGQPSGIHTTP-SP 216 ++L ++++ L+ QA D + + +I ++EQ + +P+ + +P P Sbjct: 1296 SINQLRKVLQDTSALITSPQARED-------IVTLGDKITVVEEQTMVKPTDVTESPLDP 1348 Query: 217 IKLDFTPREQSVLDLVSQGLMNKEIAAQLKTSVRNVEKYVSRL 259 + F + DL L + +A + S + +E+ V L Sbjct: 1349 TAIAFLRDDLCGGDLT---LFGEMVACYCQESQKLIEELVQGL 1388 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 63.2 bits (152), Expect = 9e-13 Identities = 45/121 (37%), Positives = 62/121 (51%), Gaps = 3/121 (2%) Query: 57 SLLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGY 116 ++LLVDDE + E + L G +D+A L+I D M+PQV G Sbjct: 3 NILLVDDENALTEPLSKALGHQGH-TIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGL 61 Query: 117 QFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLAR 176 + +++R S PV+FLTA+ DR+ G G D +L KPF+ EL A VR LL R Sbjct: 62 EICRQIR--ILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFELRELLARVRALLRR 119 Query: 177 Q 177 Q Sbjct: 120 Q 120 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 63.2 bits (152), Expect = 9e-13 Identities = 43/153 (28%), Positives = 80/153 (52%), Gaps = 13/153 (8%) Query: 58 LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPA-------LVISDIMM 110 +L+V+DE +RE++ L++ G ++V + +A LQ L+I DIM+ Sbjct: 33 ILVVEDEVSIRETIVLSLQEEG-YEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIML 91 Query: 111 PQVDGYQFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIV 170 PQV+G + LR + P++ ++A+G +++ G + G D +++KPF EL A Sbjct: 92 PQVNGLDVCRSLRFGG--DNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARC 149 Query: 171 RNLLARQQASSDAGSESAKLQEIY---QEIRAL 200 R ++ RQ + + + K +++ QE R L Sbjct: 150 RAMIRRQGLAGNNIAPFRKFRDLVLYPQECRVL 182 >SYNE-PCC-01-002951 ssl0564 Length = 89 Score = 59.7 bits (143), Expect = 1e-11 Identities = 29/56 (51%), Positives = 41/56 (73%) Query: 224 REQSVLDLVSQGLMNKEIAAQLKTSVRNVEKYVSRLFTKTGTNSRTELVRFALQHG 279 RE +LDLV+ GL N+E++ +L+ S R V+ +VS + TKT T +R ELVR+ALQ G Sbjct: 15 RELEILDLVAIGLTNQEVSERLEISKRTVDNHVSNILTKTNTENRVELVRWALQWG 70 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 59.7 bits (143), Expect = 1e-11 Identities = 36/134 (26%), Positives = 70/134 (52%), Gaps = 3/134 (2%) Query: 58 LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGYQ 117 +L+V++E + ++ L+ G + V +A + + + Q P L+I + +P + G + Sbjct: 5 VLVVEEEEKLARFMELELKYEG-YDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLE 63 Query: 118 FLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLARQ 177 ++LRE +P++ +TA+ +R+ G G D ++ KPF+ DE A +R L R Sbjct: 64 LCRRLREMG--SRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRRT 121 Query: 178 QASSDAGSESAKLQ 191 +SD + A L+ Sbjct: 122 HTTSDEVLQFADLR 135 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 59.7 bits (143), Expect = 1e-11 Identities = 38/120 (31%), Positives = 65/120 (54%), Gaps = 3/120 (2%) Query: 58 LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGYQ 117 +LL++D+ + +Q L G F VD + L V+ D+ +P++DG + Sbjct: 3 ILLIEDDNLIGNGLQIGLTKLG-FAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLE 61 Query: 118 FLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLARQ 177 LQ+ R + Q +PV+ LTAR +R++G Q+G D +L KPF E+ A ++ L+ R+ Sbjct: 62 VLQQWRSN--HQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRR 119 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 55.5 bits (132), Expect = 2e-10 Identities = 32/108 (29%), Positives = 54/108 (50%) Query: 54 EPISLLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQV 113 +P+ +LV D+ V + L F+++ A+N EA + P L+ D+ MP + Sbjct: 627 QPVYKILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVM 686 Query: 114 DGYQFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPF 161 DGY+ + ++ + + VV LTA + ++ GCD FL KPF Sbjct: 687 DGYEATKYIKGQVKGNATAVVALTASVLEEEKAIVLSAGCDDFLRKPF 734 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 52.0 bits (123), Expect = 2e-09 Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 8/128 (6%) Query: 52 MAEPISLLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMP 111 M +LLV+D R+ + L G ++V +A + +A P L++ D+ +P Sbjct: 1 MESMAKVLLVEDNEMNRDMLSRRLIRKG-YEVVIAVDGEQAVTMAISESPQLILMDMSLP 59 Query: 112 QVDGYQFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVR 171 +DG+ ++++ +P++ LTA M DR + GCD + +KP + ++ Sbjct: 60 IIDGWTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIE-------IK 112 Query: 172 NLLARQQA 179 LL + +A Sbjct: 113 RLLQKMEA 120 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 48.9 bits (115), Expect = 2e-08 Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 1/136 (0%) Query: 58 LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGYQ 117 +L+VDD+ +R ++ +L+ G +V+LA N EA P +V+ D +MP +DG+ Sbjct: 14 ILVVDDDGFMRMQLRVYLQKEGH-RVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGFA 72 Query: 118 FLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLARQ 177 Q L + + S V+ +T + ++ G +++KP L V+ LL + Sbjct: 73 CCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLLYQN 132 Query: 178 QASSDAGSESAKLQEI 193 + S + L+ + Sbjct: 133 RLQHQLESVNQMLERL 148 >SYNE-PCC-01-000877 sll1330 Length = 250 Score = 45.8 bits (107), Expect = 2e-07 Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 4/122 (3%) Query: 55 PISLLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVD 114 P+ + +V+ P +R + L+ SG + V + +A + LP L + D + D Sbjct: 3 PVYISVVEGNPHLRSLLSWHLQQSG-YLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGD 61 Query: 115 GYQFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLL 174 G + + L + + QS+ + L+A+ D + G + G D +L+KPF E A + L+ Sbjct: 62 GIELCRWLYQ--QHQSM-IFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLI 118 Query: 175 AR 176 R Sbjct: 119 RR 120 >SYNE-PCC-01-001075 sll1592 Length = 226 Score = 42.0 bits (97), Expect = 2e-06 Identities = 51/228 (22%), Positives = 95/228 (41%), Gaps = 15/228 (6%) Query: 56 ISLLLVDDEPGVRESVQAFLEDSGDFKVDLAANATE---AWDYLQHHLPALVISDIMMPQ 112 I +LLV+D+ R + L S + +D+A A + A Y+ L +VI D+ +P Sbjct: 8 IRILLVEDDELFRLGLVTRL--SQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPG 65 Query: 113 VDGYQFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRN 172 + G + ++++ LPV+ LT+ + + + K + L +R+ Sbjct: 66 IGGIEACHQIKKI--HPQLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLVLAIRS 123 Query: 173 LLARQQASSDAGSESAKLQEIYQEIRALKEQIGQPSGIHTTPSPIKLDFTPREQSVLDLV 232 + A S+ ++Q +Q + + P T RE +L LV Sbjct: 124 VAAGAFWWDAIASQ--EIQTAFQHSSSTGAVLPLADADGENP------LTKRELEILSLV 175 Query: 233 SQGLMNKEIAAQLKTSVRNVEKYVSRLFTKTGTNSRTELVRFALQHGL 280 ++G N+EIA +L + V +V + K RT+ A++ L Sbjct: 176 AKGKSNQEIADELYIAPGTVRVHVHTILRKLEVRDRTQAALLAIERRL 223 >SYNE-PCC-01-001039 sll1544 Length = 228 Score = 40.8 bits (94), Expect = 5e-06 Identities = 47/200 (23%), Positives = 77/200 (38%), Gaps = 27/200 (13%) Query: 82 KVDLAANATEAWDYL-QHHLPALVISDIMMPQVDGYQFLQKLREDARFQSLPVVFLTARG 140 KV + +EA Y Q P +V+ + G L++L+ AR ++ L Sbjct: 51 KVKIFTLQSEALTYFEQQPEPLVVVICQRLEDGSGLDLLKQLKAHARSPQCLLLLLNDHA 110 Query: 141 MTGDRIQGYQTGCDA-FLSKPFDPDELEAIVRNLLARQQASSDAGSESAKLQEIYQEIRA 199 + Q Y G DA FL E+ V LL + ++L+ I ++ Sbjct: 111 AIVEEAQQY--GADAIFLESSLGNGEINLAVECLLQGRTYID------SRLEAIADYRKS 162 Query: 200 LKEQIGQPSGIHTTPSPIKLDFTPREQSVLDLVSQGLMNKEIAAQLKTSVRNVEKYVSRL 259 K+++ T RE ++L LV++G N EI +L + V +YV + Sbjct: 163 QKDEL-----------------TQREVAILRLVAEGKTNSEIGQELHLASSTVREYVQTI 205 Query: 260 FTKTGTNSRTELVRFALQHG 279 K RT L+ G Sbjct: 206 MRKLNARDRTSAAIAGLREG 225 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.319 0.136 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,533 Number of Sequences: 78 Number of extensions: 1125 Number of successful extensions: 63 Number of sequences better than 1.0e-05: 32 Number of HSP's better than 0.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 12 Number of HSP's gapped (non-prelim): 38 length of query: 282 length of database: 48,235 effective HSP length: 62 effective length of query: 220 effective length of database: 43,399 effective search space: 9547780 effective search space used: 9547780 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 92 (40.0 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-002672 slr1837 (234 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-002672 slr1837 385 e-110 SYNE-PCC-01-000518 sll0789 124 2e-31 SYNE-PCC-01-000523 sll0797 112 1e-27 SYNE-PCC-01-000242 sll0396 110 5e-27 SYNE-PCC-01-001437 slr0081 107 3e-26 SYNE-PCC-01-002486 slr1584 107 3e-26 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 104 2e-25 SYNE-PCC-01-001461 slr0115 104 3e-25 SYNE-PCC-01-000414 sll0649 98 3e-23 SYNE-PCC-01-002033 slr0947 86 1e-19 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 83 9e-19 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 82 2e-18 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 74 4e-16 SYNE-PCC-01-000877 sll1330 67 4e-14 SYNE-PCC-01-002731 slr1909 63 1e-12 SYNE-PCC-01-002489 slr1588 62 1e-12 SYNE-PCC-01-002788 slr1982 61 4e-12 SYNE-PCC-01-001133 sll1673 61 4e-12 SYNE-PCC-01-001306 sll1905 59 1e-11 SYNE-PCC-01-002879 slr2104 59 2e-11 SYNE-PCC-01-002086 slr1042 59 2e-11 SYNE-PCC-01-001132 sll1672 57 7e-11 SYNE-PCC-01-002635 slr1783 52 1e-09 HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator pr... 52 1e-09 SYNE-PCC-01-002617 slr1759 50 5e-09 SYNE-PCC-01-002873 slr2098 50 6e-09 SYNE-PCC-01-002618 slr1760 49 2e-08 SYNE-PCC-01-001160 sll1708 47 7e-08 SYNE-PCC-01-000800 sll1228 46 1e-07 SYNE-PCC-01-001075 sll1592 45 2e-07 SYNE-PCC-01-000608 sll0921 45 2e-07 SYNE-PCC-01-001517 slr0222 45 2e-07 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 385 bits (990), Expect = e-110 Identities = 197/234 (84%), Positives = 197/234 (84%) Query: 1 MANILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSG 60 MANILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSG Sbjct: 1 MANILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSG 60 Query: 61 LEICRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFXXXXXXXXXXXXXXXQ 120 LEICRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPF Q Sbjct: 61 LEICRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFELRELLARVRALLRRQ 120 Query: 121 SHGETITETLGAVKXXXXXXXXXXXDVANQVAYCQGQRIALSEKEVALLTLFLQAPGQIL 180 SHGETITETLGAVK DVANQVAYCQGQRIALSEKEVALLTLFLQAPGQIL Sbjct: 121 SHGETITETLGAVKNNLLSVNNVSLDVANQVAYCQGQRIALSEKEVALLTLFLQAPGQIL 180 Query: 181 SHEEIYSHLWPGESPPSSNXXXXXXXXXXXKIEQPNAPRLINSVYGKGYCFEAN 234 SHEEIYSHLWPGESPPSSN KIEQPNAPRLINSVYGKGYCFEAN Sbjct: 181 SHEEIYSHLWPGESPPSSNVLAALVRLLRRKIEQPNAPRLINSVYGKGYCFEAN 234 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 124 bits (312), Expect = 2e-31 Identities = 81/231 (35%), Positives = 110/231 (47%), Gaps = 11/231 (4%) Query: 4 ILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAG--QYDLLILDWMLPQVSGL 61 +LLV+DE L L KAL + + +D G + G Y L I DWM+P +SGL Sbjct: 3 LLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSGL 62 Query: 62 EICRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFXXXXXXXXXXXXXXXQS 121 E+C+++R S P+L LTAKD + DRV GLDAG DDYLIKPF Sbjct: 63 ELCQKLRGQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAELLARLRSLQRRSP 122 Query: 122 HGETITETLGAVKXXXXXXXXXXXDVANQVAYCQGQRIALSEKEVALLTLFLQAPGQILS 181 + +G + A RI L+ KE LL F++ P QILS Sbjct: 123 ELQPQQLQVGQWWLDYGTFAVVTPEQA---------RITLTAKEFQLLEYFMKHPQQILS 173 Query: 182 HEEIYSHLWPGESPPSSNXXXXXXXXXXXKIEQPNAPRLINSVYGKGYCFE 232 E+I + LW + +SN K+E+ + LI +VYG GY F+ Sbjct: 174 SEQIKNQLWALSAESTSNVVAAQVRLLRRKLEEYSHGNLIETVYGLGYRFQ 224 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 112 bits (279), Expect = 1e-27 Identities = 74/230 (32%), Positives = 105/230 (45%), Gaps = 4/230 (1%) Query: 4 ILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAG--QYDLLILDWMLPQVSGL 61 ILLV+DE L + K L + + +D G +Y L I+DW+LP +SGL Sbjct: 3 ILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSGL 62 Query: 62 EICRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFXXXXXXXXXXXXXXXQS 121 E+C+++R G+S PVL LTA ++RV GLDAG DDYL KPF Sbjct: 63 ELCQKLRTQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAELLARLRALQRRSP 122 Query: 122 HGETITETLGAVKXXXXXXXXXXXDVANQVAYCQGQRIALSEKEVALLTLFLQAPGQILS 181 + TLG ++ + Q IAL+ +E + +Q P +I+S Sbjct: 123 QFQPQILTLG--NFSLDPSNNLLSVTISEPLNLERQEIALTVREFQIFQYLMQNPERIIS 180 Query: 182 HEEIYSHLWPGESPPSSNXXXXXXXXXXXKIEQPNAPRLINSVYGKGYCF 231 +I LW + P SN K+ Q N P I +V G+GY F Sbjct: 181 GSKIRQQLWDLDEEPMSNVVAAQMRLIRRKLAQQNCPCPIKTVPGQGYRF 230 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 110 bits (274), Expect = 5e-27 Identities = 70/227 (30%), Positives = 109/227 (48%), Gaps = 12/227 (5%) Query: 4 ILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGLEI 63 +L+V++E L + L ++G+ + VA G G A DL+I++ LP +SGLE+ Sbjct: 5 VLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLEL 64 Query: 64 CRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFXXXXXXXXXXXXXXXQSHG 123 CR++R +G P++ +TAKD +++RV GLDAG DDY++KPF Sbjct: 65 CRRLREMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLR----- 119 Query: 124 ETITETLGAVKXXXXXXXXXXXDVANQVAYCQGQR-IALSEKEVALLTLFLQAPGQILSH 182 T T + ++ ++ +G R I L+ KE LL L Q+L+ Sbjct: 120 RTHTTSDEVLQFADLRFNRSTREIQ------RGDRLIDLTAKEFELLDYLLSHARQVLTR 173 Query: 183 EEIYSHLWPGESPPSSNXXXXXXXXXXXKIEQPNAPRLINSVYGKGY 229 E+I +W + SN K+E PRLI +V G GY Sbjct: 174 EQILERVWGYDFMGDSNIIEVYIRYLRLKLEAAGEPRLIQTVRGVGY 220 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 107 bits (268), Expect = 3e-26 Identities = 72/240 (30%), Positives = 115/240 (47%), Gaps = 23/240 (9%) Query: 4 ILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIA-----GQ--YDLLILDWMLP 56 IL+V+DE ++ E + +L +G+ + D G+ LA+ GQ DL+ILD MLP Sbjct: 33 ILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIMLP 92 Query: 57 QVSGLEICRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFXXXXXXXXXXXX 116 QV+GL++CR +R G +TP+L ++AK + ++V GL+ G DDY+ KPF Sbjct: 93 QVNGLDVCRSLRFGGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARCRAM 152 Query: 117 XXXQSHGETITETLGAVKXXXXXXXXXXXDVANQVAYC----QGQRIALSEKEVALLTLF 172 Q + D+ C +G+ ++L+ KE LL LF Sbjct: 153 IRRQ-----------GLAGNNIAPFRKFRDLVLYPQECRVLMRGEEVSLAPKEFRLLELF 201 Query: 173 LQAPGQILSHEEIYSHLWPGESPPSSNXXXXXXXXXXXKIEQ-PNAPRLINSVYGKGYCF 231 + P ++ S E++ H+W + S K+EQ P+ P + +V G GY F Sbjct: 202 MSYPRRVWSREQLIEHIWGIDFMGDSKTVDVHIRWLREKLEQDPSQPEYLVTVRGFGYRF 261 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 107 bits (267), Expect = 3e-26 Identities = 67/227 (29%), Positives = 112/227 (49%), Gaps = 11/227 (4%) Query: 4 ILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGLEI 63 ILLV+D+ L E L++AL Q +T+D+A A +YDL+ILD MLP++ G+ + Sbjct: 3 ILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGITL 62 Query: 64 CRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFXXXXXXXXXXXXXXXQSHG 123 C++ R + P+L +TA+DT++D++ GLDAG DDY++KP Sbjct: 63 CQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRRGCAT 122 Query: 124 ETITETLGAVKXXXXXXXXXXXDVANQVAYCQGQRIALSEKEVALLTLFLQAPGQILSHE 183 G ++ +V+Y + ++L+ KE ++L L L+ ++LS Sbjct: 123 CQPVLEWGPIRLDPSTY---------EVSY-DNEVLSLTRKEYSILELLLRNGRRVLSRS 172 Query: 184 EIYSHLWPGESPPSSNXXXXXXXXXXXKIEQPN-APRLINSVYGKGY 229 I +W ESPP + K++ + I +V+G GY Sbjct: 173 MIIDSIWKLESPPEEDTVKVHVRSLRQKLKSAGLSADAIETVHGIGY 219 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 104 bits (260), Expect = 2e-25 Identities = 70/227 (30%), Positives = 103/227 (45%), Gaps = 16/227 (7%) Query: 4 ILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGLEI 63 ILL++D+N + L L G +D GKTG+A + YD ++LD LP++ GLE+ Sbjct: 3 ILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLEV 62 Query: 64 CRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFXXXXXXXXXXXXXXXQ-SH 122 +Q R PVL LTA+DTLD+RV GL +G DDYL KPF + + Sbjct: 63 LQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRRYGY 122 Query: 123 GETITETLGAVKXXXXXXXXXXXDVANQVAYCQGQRIALSEKEVALLTLFLQAPGQILSH 182 ++ E G D + + Q I+L+ +E LL LF+ ++LS Sbjct: 123 HHSVIEQAGV-----------KLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSR 171 Query: 183 EEIYSHLWPGESPPSSNXXXXXXXXXXXKIEQPNAPRLINSVYGKGY 229 I L + SS + Q + I +V+G GY Sbjct: 172 SSIEEKLSSWDEEISSG----ALDVHIYNLRQKLGKQFIRTVHGVGY 214 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 104 bits (259), Expect = 3e-25 Identities = 76/250 (30%), Positives = 110/250 (44%), Gaps = 38/250 (15%) Query: 1 MANILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSG 60 M IL++DD+ A+++ +S L G+ + A G G A+A+ Q DL++LD MLP+V G Sbjct: 1 MPRILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDG 60 Query: 61 LEICRQIRILGHST--PVLFLTAKDTLDDRVAGLDAGGDDYLIKPFXXXXXXXXXXXXXX 118 +C+++R + PVL LTA + D++ G D+G DDYL KPF Sbjct: 61 FTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPF-------------- 106 Query: 119 XQSHGETITETLGAVKXXXXXX-----XXXXXDVANQ----------VAYCQGQRIALSE 163 + E L V+ ++ NQ A G+ I L+ Sbjct: 107 ------DVEEMLARVRALLRRTDRIPQAAKHSEILNQGPLTLVPERFEAIWFGKSIKLTH 160 Query: 164 KEVALLTLFLQAPGQILSHEEIYSHLWPGESPPSSNXXXXXXXXXXXKIE-QPNAPRLIN 222 E LL LQ GQ +S +I +W E K+E P PR I Sbjct: 161 LEFELLHCLLQRHGQTVSPSDILREVWGYEPDDDIETIRVHIRHLRTKLEPNPRRPRFIK 220 Query: 223 SVYGKGYCFE 232 +VYG GYC E Sbjct: 221 TVYGAGYCLE 230 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 97.8 bits (242), Expect = 3e-23 Identities = 69/235 (29%), Positives = 106/235 (45%), Gaps = 6/235 (2%) Query: 1 MANILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSG 60 M NIL+V+D+ + + + + L + T V + G+TGL + DL++LD MLP++ G Sbjct: 11 MPNILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDG 70 Query: 61 LEICRQIRIL-GHSTP-VLFLTAKDTLDDRVAGLDAGGDDYLIKPFXXXXXXXXXXXXXX 118 LE+C +IR G P +L LTAK DR+ GL G DDYL+KPF Sbjct: 71 LEVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRALLR 130 Query: 119 XQSHGETITETLGAVKXXXXXXXXXXXDVANQVAYCQGQRIALSEKEVALLTLFLQAPGQ 178 Q + +G + A++ + + + L+ E LL F+ PG+ Sbjct: 131 RQLRQ---GQPVGQIYRTNHFQVDLDQHQASRYQGDRQEELELTGLEFNLLATFMSYPGR 187 Query: 179 ILSHEEIYSHLWPGESPPSSNXXXXXXXXXXXKIE-QPNAPRLINSVYGKGYCFE 232 + + ++ LW + KIE P P I +V G GY FE Sbjct: 188 VWNRTQLIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGYKFE 242 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 85.5 bits (210), Expect = 1e-19 Identities = 62/232 (26%), Positives = 103/232 (44%), Gaps = 12/232 (5%) Query: 6 LVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGLEICR 65 +VDDE ++ L L G+ + A G+ +A DL++LD M+P++ G +C+ Sbjct: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 Query: 66 QIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFX-XXXXXXXXXXXXXXQSHGE 124 ++R P++ LTA + DR+ GL+ G DDY++KPF +G Sbjct: 61 ELR-KESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKNGM 119 Query: 125 TITETLGAVKXXXXXXXXXXXDVANQVAYCQGQRIALSEKEVALLTLFLQAPGQILSHEE 184 + G ++ D + Y +RI L+ E +LL L + G+ S E Sbjct: 120 PGIPSSGVLQ-----IATIRIDTNKRQVYKGDERIRLTGMEFSLLELLVSRSGEPFSRSE 174 Query: 185 IYSHLWPGESPP---SSNXXXXXXXXXXXKIEQ-PNAPRLINSVYGKGYCFE 232 I +W G +P + K+E+ P+ P LI + G GY F+ Sbjct: 175 ILQEVW-GYTPERHVDTRVVDVHISRLRAKLEEDPSNPELILTARGTGYLFQ 225 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 82.8 bits (203), Expect = 9e-19 Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 14/233 (6%) Query: 1 MANILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSG 60 M+ +LLVDD+ LTE LS L +G ++ A+ G L + Y L++LD M+P+++G Sbjct: 1 MSKLLLVDDDIELTELLSTLLELEGFDVETANNGLEAL-QKLNESYKLVLLDVMMPKLNG 59 Query: 61 LEICRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPF---XXXXXXXXXXXXX 117 +E ++IR + + PV+ LTA+ DRV GL+ G DD L KPF Sbjct: 60 IETLKEIRKVSN-VPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRRS 118 Query: 118 XXQSHGETITETLGAVKXXXXXXXXXXXDVANQVAYCQGQRIALSEKEVALLTLFLQAPG 177 S+ + E L ++ +A + + L++ E +L L L++ G Sbjct: 119 ASPSNNISNVEIL--------SFDGITLHFSHGIATYNEENLNLTDYEFKILCLLLKSKG 170 Query: 178 QILSHEEIYSHLWPGESPPSSNXXXXXXXXXXXKI-EQPNAPRLINSVYGKGY 229 ++S EE+ + P K+ ++ N P ++ GKGY Sbjct: 171 NVVSREELSLEVMEKPLTPFDRSLDMHISNLRRKLPKRKNKPSWFKTLRGKGY 223 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 82.0 bits (201), Expect = 2e-18 Identities = 61/232 (26%), Positives = 99/232 (42%), Gaps = 13/232 (5%) Query: 4 ILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGLEI 63 IL+V+DE A+ E ++ L + + + A KT + I L++LDWMLP SG++ Sbjct: 5 ILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINK-IKENPKLILLDWMLPGRSGIQF 63 Query: 64 CRQIRILGH--STPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFXXXXXXXXXXXXXXXQS 121 + I+ + P++ LTAK T +D +A L+AG DDY+ KPF Sbjct: 64 IQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARI-------- 115 Query: 122 HGETITETLGAVKXXXXXXXXXXXDVANQVAYCQGQRIALSEKEVALLTLFLQAPGQILS 181 E + + + D Q + Q Q I LS E LL F++ P ++ S Sbjct: 116 --EAVWRRIYEQQSQFIQIDELSIDENAQRVFFQQQEINLSSTEFKLLHFFMRHPEKVYS 173 Query: 182 HEEIYSHLWPGESPPSSNXXXXXXXXXXXKIEQPNAPRLINSVYGKGYCFEA 233 E++ + +W + + I +V G GY F + Sbjct: 174 REQLLNRIWHNDLEVEYRTVDSYIRRLRRNLAPFQCEHYIQTVRGSGYRFSS 225 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 73.9 bits (180), Expect = 4e-16 Identities = 56/229 (24%), Positives = 95/229 (41%), Gaps = 4/229 (1%) Query: 4 ILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGLEI 63 IL+V+DE L +G+ + A+ G + +L+++D LP +GL + Sbjct: 6 ILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGLLL 65 Query: 64 CRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFXXXXXXXXXXXXXXXQSHG 123 R++R S P++FLT +D D++ GL+ G DDYL KPF Sbjct: 66 ARELRE-ELSLPLIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHRAMPH 124 Query: 124 ETITETLGAVKXXXXXXXXXXXDVANQVAYCQGQRIALSEKEVALLTLFLQAPGQILSHE 183 + T G + ++ + +GQ L E + F + PG++ + E Sbjct: 125 QEKENTFG--REFYRFNGWKLDLNSHSLITPEGQEFKLPRSEFRAMLHFCENPGKLQTRE 182 Query: 184 EIYSHLWPGESPPSSNXXXXXXXXXXXKIE-QPNAPRLINSVYGKGYCF 231 E+ + E P E PN P +I +++G+GY F Sbjct: 183 ELLKKMTGRELKPQDRTVDVTIRRIRKHFEDHPNTPNIIMTIHGEGYRF 231 >SYNE-PCC-01-000877 sll1330 Length = 250 Score = 67.4 bits (163), Expect = 4e-14 Identities = 55/189 (29%), Positives = 80/189 (42%), Gaps = 14/189 (7%) Query: 48 LLILDWMLPQVSGLEICRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFXXX 107 L ++D L G+E+CR + H + + L+AKDT D V GL AG DDYL KPF Sbjct: 50 LAVIDSDLTDGDGIELCRWL-YQQHQSMIFILSAKDTEKDIVHGLKAGADDYLTKPFGMQ 108 Query: 108 XXXXXXX-XXXXXQSHGETITETLGAVKXXXXXXXXXXXDVANQVAYCQGQRIALSEKEV 166 ++ + G +K D+ + QG + L+ +E Sbjct: 109 EFLARIECLIRRVRTVAAPLLLDYGVLK----------IDLVQRRVEYQGNFVDLTPQEF 158 Query: 167 ALLTLFLQAPGQILSHEEIYSHLWPGESPPSSNXXXXXXXXXXXKIE-QPNAPRLINSVY 225 +LL + QA G LS E+ WP E+ + KIE P P LI +V Sbjct: 159 SLLYVLTQAEGSALSRTELLRRAWP-EAIDNPRTIDTHVLSLRKKIETDPRQPSLIQTVR 217 Query: 226 GKGYCFEAN 234 GY F ++ Sbjct: 218 NVGYRFNSS 226 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 62.8 bits (151), Expect = 1e-12 Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 2/104 (1%) Query: 3 NILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGLE 62 ++LLVDD+ L + L +QG+ + A G+ L + D+++ D M+P++ G Sbjct: 9 HLLLVDDDPNLLLLVKDYLEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYA 68 Query: 63 ICRQIRILGHST--PVLFLTAKDTLDDRVAGLDAGGDDYLIKPF 104 Q+R + PV+FL+AK +RV GL+ G D Y+ KPF Sbjct: 69 FIEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPF 112 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 62.4 bits (150), Expect = 1e-12 Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 4/108 (3%) Query: 1 MANILLVDDENALTEPLSKALGHQGHTIDVADQGKT--GLAMAIAGQYDLLILDWMLPQV 58 M+ IL+V+DE + E + + L + + I A+ G GL ++ DL+I D M+P++ Sbjct: 1 MSTILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEM 60 Query: 59 SG--LEICRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPF 104 G L Q + P +FLTA T+ D G+++G DDYLIKPF Sbjct: 61 DGHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPF 108 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 60.8 bits (146), Expect = 4e-12 Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 6/107 (5%) Query: 1 MANILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSG 60 MA +LLV+D + LS+ L +G+ + +A G+ + MAI+ L+++D LP + G Sbjct: 4 MAKVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDG 63 Query: 61 LEICRQIRILGH----STPVLFLTAKDTLDDRVAGLDAGGDDYLIKP 103 +QI+ GH P++ LTA DR + AG DDY KP Sbjct: 64 WTATKQIK--GHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKP 108 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 60.8 bits (146), Expect = 4e-12 Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 2/104 (1%) Query: 3 NILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGLE 62 NILLVDD + LS L + G+T+ GK L + DL++LD +P + G + Sbjct: 10 NILLVDDLPNNLQLLSDLLINLGYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQ 69 Query: 63 ICRQIRILG--HSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPF 104 +C I+ P++F++A D+V + GG DY+ KPF Sbjct: 70 VCEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPF 113 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 59.3 bits (142), Expect = 1e-11 Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 2/103 (1%) Query: 4 ILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGLEI 63 IL+VDD +S+ L +G++ G L Q DL++LD M+P + GLE+ Sbjct: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQPDLILLDLMMPGMDGLEV 79 Query: 64 CRQIR--ILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPF 104 C +++ PV+FLTA + D + G DY+ KPF Sbjct: 80 CDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPF 122 Score = 48.1 bits (113), Expect = 2e-08 Identities = 30/103 (29%), Positives = 57/103 (55%), Gaps = 4/103 (3%) Query: 5 LLVDDENALTEPLSKALGHQ-GHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGLEI 63 +L+ ++N + + ++K L + G+ +DV + G+ L+ G YD++++D +P++ GL Sbjct: 742 ILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTA 801 Query: 64 CRQI-RILGHSTP--VLFLTAKDTLDDRVAGLDAGGDDYLIKP 103 I R G S ++ +TA DR L +G +DY+ KP Sbjct: 802 TEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKP 844 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 58.5 bits (140), Expect = 2e-11 Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 2/104 (1%) Query: 2 ANILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGL 61 A+ILLV+D E L +G + VA+ G+ L + + YD +++D +P ++G Sbjct: 718 ASILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGY 777 Query: 62 EICRQIRILGH--STPVLFLTAKDTLDDRVAGLDAGGDDYLIKP 103 + R IR + + P++ +TA D+ LDAG +D+L KP Sbjct: 778 DATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKP 821 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 58.5 bits (140), Expect = 2e-11 Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 2/106 (1%) Query: 1 MANILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSG 60 M +LLV+D ++ E +S L G + +A G L DL++LD ++P+++G Sbjct: 27 MNAVLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNG 86 Query: 61 LEICRQIRI--LGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPF 104 E+CR+I+ + PV+ ++K DR G+ G D Y+ KPF Sbjct: 87 YEVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPF 132 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 56.6 bits (135), Expect = 7e-11 Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 2/103 (1%) Query: 4 ILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGLEI 63 IL+VDD++ + L K L G I+ A G+ +A+ + + L+ +D +P + G E Sbjct: 632 ILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYEA 691 Query: 64 CRQIR--ILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPF 104 + I+ + G++T V+ LTA +++ L AG DD+L KPF Sbjct: 692 TKYIKGQVKGNATAVVALTASVLEEEKAIVLSAGCDDFLRKPF 734 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 52.4 bits (124), Expect = 1e-09 Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 3/105 (2%) Query: 3 NILLVDDENALTEPLSKALGHQGH-TIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGL 61 ++LLVDDE + E + L G +D+A L+I D M+PQV G Sbjct: 57 SLLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGY 116 Query: 62 EICRQIR--ILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPF 104 + +++R S PV+FLTA+ DR+ G G D +L KPF Sbjct: 117 QFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPF 161 >HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator protein (narP) Length = 208 Score = 52.4 bits (124), Expect = 1e-09 Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 2/101 (1%) Query: 4 ILLVDDENALTEPLSKALGHQGHTIDVAD--QGKTGLAMAIAGQYDLLILDWMLPQVSGL 61 +LL+DD + + + + + VAD G G+++A+ D++ILD + +SGL Sbjct: 7 VLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLSGL 66 Query: 62 EICRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIK 102 + + +R G +L LT D +D +DAG D YL+K Sbjct: 67 DTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLK 107 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 50.4 bits (119), Expect = 5e-09 Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 3/103 (2%) Query: 4 ILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGLEI 63 ILL +D + + L + G+ + +A+ G+ + YDL+++D +P + G+ Sbjct: 1192 ILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGITA 1251 Query: 64 CRQIR---ILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKP 103 CR IR L ++ +TA DR LDAG D Y+ KP Sbjct: 1252 CRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKP 1294 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 50.1 bits (118), Expect = 6e-09 Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 2/104 (1%) Query: 2 ANILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGL 61 A ILLV+D E ++ L G +DVA G L Y L+++D +P++ G+ Sbjct: 925 ARILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGI 984 Query: 62 EICRQIRILGH--STPVLFLTAKDTLDDRVAGLDAGGDDYLIKP 103 E IR P++ +TA DR L AG +D+L KP Sbjct: 985 EATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKP 1028 Score = 44.7 bits (104), Expect = 3e-07 Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 7/107 (6%) Query: 4 ILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQ-----YDLLILDWMLPQV 58 +L+VDD + + L ++ + G L + ++ +DW +P + Sbjct: 773 VLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPNM 832 Query: 59 SGLEICRQIRILG--HSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKP 103 GLE+ R+++ +G H + +TA + V G DD L+KP Sbjct: 833 DGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKP 879 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 48.5 bits (114), Expect = 2e-08 Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 2/104 (1%) Query: 2 ANILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGL 61 A IL+VDD+ + L L +GH +++A G+ L + ++++LD ++P + G Sbjct: 12 AKILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGF 71 Query: 62 EICRQI-RILGHSTP-VLFLTAKDTLDDRVAGLDAGGDDYLIKP 103 C+ + +I + +P VL +T D +AG DY+ KP Sbjct: 72 ACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKP 115 >SYNE-PCC-01-001160 sll1708 Length = 226 Score = 46.6 bits (109), Expect = 7e-08 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 2/101 (1%) Query: 4 ILLVDDENALTEPLSKALG--HQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGL 61 IL+V+D+ + L +ALG + I D G + A DL+++D LP + G+ Sbjct: 19 ILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPGLDGI 78 Query: 62 EICRQIRILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIK 102 E +QI+ ++ LT+ ++ +A L +G D Y +K Sbjct: 79 EATKQIKQTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVK 119 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 45.8 bits (107), Expect = 1e-07 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 2/103 (1%) Query: 4 ILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGLEI 63 +L+VDD L + L G + A+ G+ +A+ + ++++D +P + G Sbjct: 420 VLVVDDRPESRLLLRQLLTSLGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRST 479 Query: 64 CRQIRIL--GHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPF 104 ++I+ G T ++ LTA +R L AG DD+L KPF Sbjct: 480 TQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPF 522 >SYNE-PCC-01-001075 sll1592 Length = 226 Score = 45.4 bits (106), Expect = 2e-07 Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 8/104 (7%) Query: 4 ILLVDDENALTEPLSKALGHQGHTIDVA---DQGKTGLAMAIAGQYDLLILDWMLPQVSG 60 ILLV+D+ L L Q +DVA + G+T +A +D++ILD LP + G Sbjct: 10 ILLVEDDELFRLGLVTRLS-QEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPGIGG 68 Query: 61 LEICRQIRILGHSTPVLFLT--AKDTLDDRVAGLDAGGDDYLIK 102 +E C QI+ + PVL LT ++ L +R+ ++A Y +K Sbjct: 69 IEACHQIKKIHPQLPVLILTSHSQPALINRL--IEAQAQGYCVK 110 >SYNE-PCC-01-000608 sll0921 Length = 222 Score = 45.4 bits (106), Expect = 2e-07 Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 4/103 (3%) Query: 4 ILLVDDENALTEPLSKALGHQG--HTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGL 61 I L++DE+ + + L AL + + A G+ GL M + D++I+D LP ++G+ Sbjct: 6 IALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNGI 65 Query: 62 EICRQIR--ILGHSTPVLFLTAKDTLDDRVAGLDAGGDDYLIK 102 ++ +Q++ L V+ LT D + +A AG D Y +K Sbjct: 66 DVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMK 108 >SYNE-PCC-01-001517 slr0222 Length = 1178 Score = 45.1 bits (105), Expect = 2e-07 Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 3/103 (2%) Query: 4 ILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGLEI 63 +LLVDD+ LS+AL I A+ G+ +A A ++ L+IL + ++ GL Sbjct: 9 VLLVDDQRENLVALSRALDSLPVEIITANSGQEAIATAATTEFALMILAQEMSELDGLNT 68 Query: 64 CRQIRI--LGHSTPVLFLTAKDTLDDRVAGLD-AGGDDYLIKP 103 + +R L TP++FL ++ + +A ++ G D+L +P Sbjct: 69 AKILRSFPLAEQTPIIFLARQEIITKAMAEINILGLVDFLAQP 111 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.317 0.137 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,087 Number of Sequences: 78 Number of extensions: 674 Number of successful extensions: 69 Number of sequences better than 1.0e-05: 32 Number of HSP's better than 0.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 10 Number of HSP's gapped (non-prelim): 42 length of query: 234 length of database: 48,235 effective HSP length: 60 effective length of query: 174 effective length of database: 43,555 effective search space: 7578570 effective search space used: 7578570 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 91 (39.7 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-002731 slr1909 (213 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-002731 slr1909 389 e-111 SYNE-PCC-01-002635 slr1783 134 3e-34 SYNE-PCC-01-002033 slr0947 97 5e-23 SYNE-PCC-01-002086 slr1042 89 1e-20 SYNE-PCC-01-001461 slr0115 89 1e-20 SYNE-PCC-01-002489 slr1588 88 2e-20 SYNE-PCC-01-000608 sll0921 84 5e-19 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 83 8e-19 SYNE-PCC-01-001575 slr0312 82 2e-18 SYNE-PCC-01-001306 sll1905 82 2e-18 SYNE-PCC-01-000414 sll0649 81 3e-18 SYNE-PCC-01-001133 sll1673 78 3e-17 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 74 4e-16 SYNE-PCC-01-001437 slr0081 73 6e-16 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 72 1e-15 SYNE-PCC-01-002672 slr1837 71 2e-15 HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator pr... 69 1e-14 SYNE-PCC-01-001160 sll1708 68 3e-14 SYNE-PCC-01-002951 ssl0564 67 3e-14 SYNE-PCC-01-000242 sll0396 65 1e-13 SYNE-PCC-01-002873 slr2098 64 4e-13 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 63 9e-13 SYNE-PCC-01-002788 slr1982 62 1e-12 SYNE-PCC-01-002879 slr2104 62 2e-12 SYNE-PCC-01-002486 slr1584 60 4e-12 SYNE-PCC-01-001075 sll1592 59 1e-11 SYNE-PCC-01-000800 sll1228 57 5e-11 SYNE-PCC-01-000523 sll0797 55 2e-10 SYNE-PCC-01-002617 slr1759 54 4e-10 SYNE-PCC-01-000518 sll0789 52 1e-09 SYNE-PCC-01-002618 slr1760 50 4e-09 SYNE-PCC-01-000877 sll1330 50 6e-09 SYNE-PCC-01-001132 sll1672 48 2e-08 SYNE-PCC-01-000511 sll0782 45 2e-07 SYNE-PCC-01-002221 slr1213 44 4e-07 SYNE-PCC-01-001039 sll1544 42 2e-06 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 389 bits (1000), Expect = e-111 Identities = 197/213 (92%), Positives = 197/213 (92%) Query: 1 MSQSKENYHXXXXXXXXXXXXXXXXYLEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIM 60 MSQSKENYH YLEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIM Sbjct: 1 MSQSKENYHLLLVDDDPNLLLLVKDYLEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIM 60 Query: 61 MPEMDGYAFIEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQ 120 MPEMDGYAFIEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQ Sbjct: 61 MPEMDGYAFIEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQ 120 Query: 121 VQSCLRQADRLLQHNNHPLEDNARVQVARDVELTPTETKVIQLVAQGLANREIADHLKVS 180 VQSCLRQADRLLQHNNHPLEDNARVQVARDVELTPTETKVIQLVAQGLANREIADHLKVS Sbjct: 121 VQSCLRQADRLLQHNNHPLEDNARVQVARDVELTPTETKVIQLVAQGLANREIADHLKVS 180 Query: 181 QRTVESHVSNMLNKTGLHNRTELARWAIQKSIA 213 QRTVESHVSNMLNKTGLHNRTELARWAIQKSIA Sbjct: 181 QRTVESHVSNMLNKTGLHNRTELARWAIQKSIA 213 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 134 bits (336), Expect = 3e-34 Identities = 75/207 (36%), Positives = 124/207 (59%), Gaps = 20/207 (9%) Query: 26 YLEYQG-YQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIPV 84 +LE G ++V A N EA D L +P +++ DIMMP++DGY F++++R++ +PV Sbjct: 74 FLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGYQFLQKLREDARFQSLPV 133 Query: 85 MFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCL--RQADRLLQHNNHPLED- 141 +FL+A+G + +R++G G D +++KPF+P+EL A V++ L +QA + L++ Sbjct: 134 VFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNLLARQQASSDAGSESAKLQEI 193 Query: 142 -----NARVQVAR-----------DVELTPTETKVIQLVAQGLANREIADHLKVSQRTVE 185 + Q+ + ++ TP E V+ LV+QGL N+EIA LK S R VE Sbjct: 194 YQEIRALKEQIGQPSGIHTTPSPIKLDFTPREQSVLDLVSQGLMNKEIAAQLKTSVRNVE 253 Query: 186 SHVSNMLNKTGLHNRTELARWAIQKSI 212 +VS + KTG ++RTEL R+A+Q + Sbjct: 254 KYVSRLFTKTGTNSRTELVRFALQHGL 280 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 96.7 bits (239), Expect = 5e-23 Identities = 60/187 (32%), Positives = 100/187 (53%), Gaps = 26/187 (13%) Query: 31 GYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIPVMFLSAK 90 GY+V TA +G EA+ + PD++V D+MMP++DGY +++R+ DI P++ L+A Sbjct: 20 GYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQELRKESDI---PIIMLTAL 76 Query: 91 GQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQADR----------LLQHNNHPLE 140 G +R+ GL +GAD Y+ KPF P+EL A+++S LR+ D+ +LQ ++ Sbjct: 77 GDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKNGMPGIPSSGVLQIATIRID 136 Query: 141 DNARVQVARD--VELTPTETKVIQLV----AQGLANREIADHL-------KVSQRTVESH 187 N R D + LT E +++L+ + + EI + V R V+ H Sbjct: 137 TNKRQVYKGDERIRLTGMEFSLLELLVSRSGEPFSRSEILQEVWGYTPERHVDTRVVDVH 196 Query: 188 VSNMLNK 194 +S + K Sbjct: 197 ISRLRAK 203 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 89.0 bits (219), Expect = 1e-20 Identities = 42/100 (42%), Positives = 64/100 (64%) Query: 27 LEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIPVMF 86 L+ G+QVT A +G EAL+ L PD++V DI+MP M+GY +++ +P +PV+ Sbjct: 47 LKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEVCRRIKSDPKTKNVPVIM 106 Query: 87 LSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLR 126 S+KG+ +R G+ GAD Y+AKPF+P EL ++ LR Sbjct: 107 CSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLLR 146 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 88.6 bits (218), Expect = 1e-20 Identities = 42/111 (37%), Positives = 72/111 (64%) Query: 27 LEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIPVMF 86 LE GY V A +G + L PD+I+ D+M+P++DG+ +++R++ + IPV+ Sbjct: 21 LEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFTVCQRLRRDERTADIPVLM 80 Query: 87 LSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQADRLLQHNNH 137 L+A GQ ++++G + GAD Y+ KPF+ EE+ A+V++ LR+ DR+ Q H Sbjct: 81 LTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALLRRTDRIPQAAKH 131 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 88.2 bits (217), Expect = 2e-20 Identities = 52/154 (33%), Positives = 84/154 (54%), Gaps = 7/154 (4%) Query: 27 LEYQGYQVTTAGNGREALDLLTT--TVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIPV 84 L + Y++ A NG AL LL + +PD+I+CD+MMPEMDG+ I +++N + IP Sbjct: 21 LSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGHGLITALQKNAKTAAIPF 80 Query: 85 MFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQADRLLQHNNHPLEDNAR 144 +FL+A G + KG+N GAD Y+ KPF+ E+L V S L++ +L + + Sbjct: 81 IFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNSRLQKQAKLSAFYQGSISSSLT 140 Query: 145 VQVARD-----VELTPTETKVIQLVAQGLANREI 173 + R LTP E ++ + + GL ++ Sbjct: 141 ERPRRSGTIGTPTLTPDEAEIWRDLEVGLNTGQV 174 >SYNE-PCC-01-000608 sll0921 Length = 222 Score = 83.6 bits (205), Expect = 5e-19 Identities = 56/189 (29%), Positives = 95/189 (50%), Gaps = 10/189 (5%) Query: 34 VTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIPVMFLSAKGQS 93 V A NGR L ++ T PD+++ DI +P+M+G +Q+++ P V+ L+ Q Sbjct: 32 VGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNGIDVTQQLKKGPLNCQCRVVILTLNDQE 91 Query: 94 HNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQ--------ADRLLQH--NNHPLEDNA 143 + + GAD Y K E L +Q+ A +L H P E ++ Sbjct: 92 ETVLAAFSAGADAYCMKDSRTELLIEAIQATHGGFAWIDPAIARIVLAHAPGAEPSEPSS 151 Query: 144 RVQVARDVELTPTETKVIQLVAQGLANREIADHLKVSQRTVESHVSNMLNKTGLHNRTEL 203 + + LT E +V+QL+ G +N +IA+ L ++ TV++HV N+LNK ++RT+ Sbjct: 152 PSRTSLSYGLTERELEVLQLIVDGCSNADIAEKLYITVGTVKTHVRNILNKLCANDRTQA 211 Query: 204 ARWAIQKSI 212 A AI+ + Sbjct: 212 AVRAIRSGL 220 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 82.8 bits (203), Expect = 8e-19 Identities = 55/192 (28%), Positives = 100/192 (52%), Gaps = 32/192 (16%) Query: 27 LEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIPVMF 86 LE +G+ V TA NG EAL L + +++ D+MMP+++G ++++R+ +S +PVM Sbjct: 21 LELEGFDVETANNGLEALQKLNESYK-LVLLDVMMPKLNGIETLKEIRK---VSNVPVMM 76 Query: 87 LSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQA---------------DRL 131 L+A+G+ +RV GL +GAD + KPF EL A++++ LR++ D + Sbjct: 77 LTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAILRRSASPSNNISNVEILSFDGI 136 Query: 132 LQHNNHPLEDNARVQVARDVELTPTETKVIQLVAQGLANREIADHLKVS---------QR 182 H +H + ++ LT E K++ L+ + N + L + R Sbjct: 137 TLHFSHGI----ATYNEENLNLTDYEFKILCLLLKSKGNVVSREELSLEVMEKPLTPFDR 192 Query: 183 TVESHVSNMLNK 194 +++ H+SN+ K Sbjct: 193 SLDMHISNLRRK 204 >SYNE-PCC-01-001575 slr0312 Length = 209 Score = 81.6 bits (200), Expect = 2e-18 Identities = 53/180 (29%), Positives = 96/180 (53%), Gaps = 9/180 (5%) Query: 34 VTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIPVMFLSAKGQS 93 + A NG +A+ L PD+ + D+ MPE++G A I + + + ++ L+ Sbjct: 35 IAQAENGEQAIALFEEHQPDVTLMDLRMPEVEGVAAISAICAI--VKFARIIVLTTYDSD 92 Query: 94 HNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQADRLLQHNNHPLEDNAR-VQVARDVE 152 + +GL GA Y+ K EP+EL +++ R + P + A+ VQ + E Sbjct: 93 EDIYRGLQAGAKGYLLKETEPDELLNAIRTVHRGQKYI------PPDVGAKLVQRLSNPE 146 Query: 153 LTPTETKVIQLVAQGLANREIADHLKVSQRTVESHVSNMLNKTGLHNRTELARWAIQKSI 212 L+ E +V+ +AQG++N +IA L + + TV+SHV+ +LNK + +RT+ A+++ I Sbjct: 147 LSERELEVLGSLAQGMSNADIATALSIGEGTVKSHVNRILNKLDVGDRTQAVIVAVKRGI 206 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 81.6 bits (200), Expect = 2e-18 Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 1/122 (0%) Query: 27 LEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIPVMF 86 LE +GY T +G EAL +T PD+I+ D+MMP MDG ++++Q+P IPV+F Sbjct: 37 LEGEGYSTTFVTSGPEALQRVTQAQPDLILLDLMMPGMDGLEVCDRLKQDPQTRDIPVIF 96 Query: 87 LSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQADRLLQHNNHPLEDNARVQ 146 L+A + + ++ GA Y+ KPF P EL A+V++ L + + + +H L + AR Sbjct: 97 LTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVKTHL-ELKQTRDNLHHTLLEQARTA 155 Query: 147 VA 148 A Sbjct: 156 EA 157 Score = 52.8 bits (125), Expect = 9e-10 Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 1/97 (1%) Query: 27 LEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIP-VM 85 L+ GY V NG+EAL L D+++ D+ MPEMDG E +R++ S P ++ Sbjct: 759 LKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTATEHIRRSQGRSERPWII 818 Query: 86 FLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQ 122 ++A +R + L G + Y++KP E L +Q Sbjct: 819 AVTAYSMEGDRERCLASGMNDYVSKPIRLEALQQALQ 855 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 80.9 bits (198), Expect = 3e-18 Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 32/195 (16%) Query: 27 LEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIPVMF 86 LE + + +G L + VPD+IV D+M+P++DG ++RQ P ++ Sbjct: 31 LEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLEVCTRIRQQPGSKDPYILM 90 Query: 87 LSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQADR------LLQHNNHPLE 140 L+AKG+ +R+ GL+ GAD Y+ KPF P EL A+V++ LR+ R + NH Sbjct: 91 LTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRALLRRQLRQGQPVGQIYRTNHFQV 150 Query: 141 DNARVQVAR-------DVELTPTETKVI--------------QLVAQGLANREIADHLKV 179 D + Q +R ++ELT E ++ QL+ + N D Sbjct: 151 DLDQHQASRYQGDRQEELELTGLEFNLLATFMSYPGRVWNRTQLIEKLWGNDFFGD---- 206 Query: 180 SQRTVESHVSNMLNK 194 +R V++H+ + K Sbjct: 207 -ERVVDTHIRRLRKK 220 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 77.8 bits (190), Expect = 3e-17 Identities = 35/92 (38%), Positives = 58/92 (63%) Query: 31 GYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIPVMFLSAK 90 GY V + +G+ AL L PD+I+ DI MP+MDGY E +++ ++ IP++F+SA Sbjct: 32 GYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQVCEMIKKEEELQDIPIIFISAL 91 Query: 91 GQSHNRVKGLNVGADIYMAKPFEPEELAAQVQ 122 G + ++VK G Y+ KPF+ EE+ A+++ Sbjct: 92 GDTFDKVKAFECGGVDYITKPFQIEEVVARIE 123 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 73.9 bits (180), Expect = 4e-16 Identities = 48/181 (26%), Positives = 94/181 (51%), Gaps = 16/181 (8%) Query: 26 YLEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIPVM 85 +L + Y V A + + A++ + P +I+ D M+P G FI+ +++ + IP++ Sbjct: 21 FLSQKYYDVIEASDFKTAINKIKEN-PKLILLDWMLPGRSGIQFIQYIKKQESYAAIPII 79 Query: 86 FLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLR----QADRLLQHNNHPLED 141 L+AK + + LN GAD Y+ KPF P+ L A++++ R Q + +Q + +++ Sbjct: 80 MLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWRRIYEQQSQFIQIDELSIDE 139 Query: 142 NAR--VQVARDVELTPTETKVIQLV---------AQGLANREIADHLKVSQRTVESHVSN 190 NA+ +++ L+ TE K++ + L NR + L+V RTV+S++ Sbjct: 140 NAQRVFFQQQEINLSSTEFKLLHFFMRHPEKVYSREQLLNRIWHNDLEVEYRTVDSYIRR 199 Query: 191 M 191 + Sbjct: 200 L 200 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 73.2 bits (178), Expect = 6e-16 Identities = 49/142 (34%), Positives = 77/142 (54%), Gaps = 16/142 (11%) Query: 27 LEYQGYQVTTAGNGREALDLLTT-------TVPDMIVCDIMMPEMDGYAFIEQVRQNPDI 79 L+ +GY+V +GR+AL LL D+I+ DIM+P+++G +R D Sbjct: 50 LQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIMLPQVNGLDVCRSLRFGGDN 109 Query: 80 SWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQADRLLQHNNHPL 139 + P++ +SAKG +V GL VGAD Y+ KPF +EL A+ ++ +R+ L NN Sbjct: 110 T--PILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARCRAMIRRQG--LAGNN--- 162 Query: 140 EDNARVQVARDVELTPTETKVI 161 A + RD+ L P E +V+ Sbjct: 163 --IAPFRKFRDLVLYPQECRVL 182 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 72.4 bits (176), Expect = 1e-15 Identities = 51/181 (28%), Positives = 92/181 (50%), Gaps = 17/181 (9%) Query: 31 GYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIPVMFLSAK 90 G+ V +G+ + LT+ D +V D+ +P++DG ++Q R N +PV+ L+A+ Sbjct: 24 GFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLEVLQQWRSNHQD--VPVLILTAR 81 Query: 91 GQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQA----DRLLQHNNHPLEDNARVQ 146 RVKGL GAD Y+ KPF E+AA++Q+ +R+ +++ L+ N R Sbjct: 82 DTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRRYGYHHSVIEQAGVKLDQNQRSV 141 Query: 147 VARD--VELTPTETKVIQLVA----QGLANREIADHL-----KVSQRTVESHVSNMLNKT 195 + + LT E K+++L + L+ I + L ++S ++ H+ N+ K Sbjct: 142 WLNNQPISLTSREYKLLELFMLNKDRVLSRSSIEEKLSSWDEEISSGALDVHIYNLRQKL 201 Query: 196 G 196 G Sbjct: 202 G 202 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 71.2 bits (173), Expect = 2e-15 Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 22/182 (12%) Query: 27 LEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIPVMF 86 L +QG+ + A G+ L + D+++ D M+P++ G Q+R + PV+F Sbjct: 21 LGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGLEICRQIRILGHST--PVLF 78 Query: 87 LSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQ--------------ADRLL 132 L+AK +RV GL+ G D Y+ KPFE EL A+V++ LR+ + LL Sbjct: 79 LTAKDTLDDRVAGLDAGGDDYLIKPFELRELLARVRALLRRQSHGETITETLGAVKNNLL 138 Query: 133 QHNNHPLEDNARVQVARDVELTPTETKV------IQLVAQGLANREIADHLKVSQRTVES 186 NN L+ +V + + +E +V +Q Q L++ EI HL + S Sbjct: 139 SVNNVSLDVANQVAYCQGQRIALSEKEVALLTLFLQAPGQILSHEEIYSHLWPGESPPSS 198 Query: 187 HV 188 +V Sbjct: 199 NV 200 >HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator protein (narP) Length = 208 Score = 68.9 bits (167), Expect = 1e-14 Identities = 49/179 (27%), Positives = 89/179 (49%), Gaps = 27/179 (15%) Query: 34 VTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIPVMFLS-AKGQ 92 V +G E + + T PD+I+ D+ M + G ++ +R + I ++ +S AK Sbjct: 33 VADVSSGTEGISVALQTSPDVIILDLNMKGLSGLDTLKGLRAEGVDARILILTVSDAKND 92 Query: 93 SHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQADRLLQ-----------HNNHPLED 141 + + + GAD Y+ K EP+ L Q++ + Q + +L H ++PL+ Sbjct: 93 IYTLI---DAGADGYLLKDTEPDTLLEQIKR-IAQGEVILSDSIKNLLLERTHEDNPLDS 148 Query: 142 NARVQVARDVELTPTETKVIQLVAQGLANREIADHLKVSQRTVESHVSNMLNKTGLHNR 200 LT E V++ +A GL+N++IA L +S+ TV+ H+ N+L K +H+R Sbjct: 149 -----------LTDREMGVLRQIATGLSNKQIAAQLFISEETVKVHIRNLLRKLNVHSR 196 >SYNE-PCC-01-001160 sll1708 Length = 226 Score = 67.8 bits (164), Expect = 3e-14 Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 12/181 (6%) Query: 39 NGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIPVMFLSAKGQSHNRVK 98 NG A+ PD+IV DI +P +DG +Q++Q I ++ L++ + + Sbjct: 50 NGYGAVQQAAVLNPDLIVMDIGLPGLDGIEATKQIKQTSP--QIHIVVLTSHTLPNEIIA 107 Query: 99 GLNVGADIYMAKPFEPEELAAQVQSCLR-------QADRLLQHNNHPLEDNARVQVARDV 151 L+ GAD Y K E L + + Q R++ N P + V+ Sbjct: 108 ALSSGADAYCVKGATLERLILAIAAAQDGATYLDPQIARVVVENLKPPVPEGQADVS--- 164 Query: 152 ELTPTETKVIQLVAQGLANREIADHLKVSQRTVESHVSNMLNKTGLHNRTELARWAIQKS 211 L+ E V++L+ +G +N+EIA L +S T+++HV ++NK + +R + A A++ Sbjct: 165 SLSEREIDVLKLIVEGKSNQEIAQTLYLSTNTIKTHVRGIMNKLSVDDRVQAAVIALRSG 224 Query: 212 I 212 + Sbjct: 225 L 225 >SYNE-PCC-01-002951 ssl0564 Length = 89 Score = 67.4 bits (163), Expect = 3e-14 Identities = 29/57 (50%), Positives = 44/57 (77%) Query: 153 LTPTETKVIQLVAQGLANREIADHLKVSQRTVESHVSNMLNKTGLHNRTELARWAIQ 209 L+ E +++ LVA GL N+E+++ L++S+RTV++HVSN+L KT NR EL RWA+Q Sbjct: 12 LSDRELEILDLVAIGLTNQEVSERLEISKRTVDNHVSNILTKTNTENRVELVRWALQ 68 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 65.5 bits (158), Expect = 1e-13 Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 8/161 (4%) Query: 27 LEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIPVMF 86 L+Y+GY V+ A +G + PD+I+ + +P M G ++R+ S IP++ Sbjct: 22 LKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLELCRRLREMG--SRIPIIL 79 Query: 87 LSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQ----ADRLLQHNNHPLEDN 142 ++AK RV GL+ GAD Y+ KPF +E A+++ LR+ +D +LQ + + Sbjct: 80 ITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARIRVQLRRTHTTSDEVLQFADLRFNRS 139 Query: 143 ARVQVARDVELTPTETKVIQLVAQGLAN-REIADHLKVSQR 182 R ++ R L K +L+ L++ R++ ++ +R Sbjct: 140 TR-EIQRGDRLIDLTAKEFELLDYLLSHARQVLTREQILER 179 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 63.9 bits (154), Expect = 4e-13 Identities = 31/87 (35%), Positives = 49/87 (56%) Query: 31 GYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIPVMFLSAK 90 G+ V A NG AL+ L +++ D+ MPEMDG +RQNP + +P++ ++A Sbjct: 948 GFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIEATIAIRQNPRYAQLPIVAMTAN 1007 Query: 91 GQSHNRVKGLNVGADIYMAKPFEPEEL 117 +R + L G + ++ KP EPEEL Sbjct: 1008 VMQGDRERCLQAGMNDHLGKPIEPEEL 1034 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 62.8 bits (151), Expect = 9e-13 Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 3/101 (2%) Query: 28 EYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIPVMFL 87 E +GY V A NG E +L +++V DI +P +G ++R+ + P++FL Sbjct: 24 EAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGLLLARELREELSL---PLIFL 80 Query: 88 SAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQA 128 + + +++ GL +GAD Y+ KPF P EL + ++ L +A Sbjct: 81 TGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHRA 121 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 62.0 bits (149), Expect = 1e-12 Identities = 27/96 (28%), Positives = 58/96 (60%) Query: 30 QGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIPVMFLSA 89 +GY+V A +G +A+ + + P +I+ D+ +P +DG+ +Q++ +PD + IP++ L+A Sbjct: 27 KGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGWTATKQIKGHPDGAHIPIIALTA 86 Query: 90 KGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCL 125 + +R + + G D Y KP E + L ++++ + Sbjct: 87 HAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEALI 122 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 61.6 bits (148), Expect = 2e-12 Identities = 31/91 (34%), Positives = 53/91 (58%) Query: 27 LEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIPVMF 86 L +G +V A NG+EAL LLT+ D I+ DI MP ++GY +RQ +P++ Sbjct: 737 LTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYDATRAIRQQEYHRNLPIIA 796 Query: 87 LSAKGQSHNRVKGLNVGADIYMAKPFEPEEL 117 ++A + ++ K L+ G + ++ KP +P+ L Sbjct: 797 MTANAMAGDQEKALDAGMNDHLTKPIKPDLL 827 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 60.5 bits (145), Expect = 4e-12 Identities = 49/183 (26%), Positives = 93/183 (50%), Gaps = 17/183 (9%) Query: 27 LEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIPVMF 86 L Q Y V A + A D + D+++ D+M+PE+DG ++ R + + +P++ Sbjct: 20 LSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGITLCQKWRSHSYL--MPILM 77 Query: 87 LSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQADRLLQH--NNHPLE-DNA 143 ++A+ ++++ GL+ GAD Y+ KP + EL A+V++ LR+ Q P+ D + Sbjct: 78 MTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRRGCATCQPVLEWGPIRLDPS 137 Query: 144 RVQVARDVE---LTPTETKVIQLVAQG----LANREIADHL-----KVSQRTVESHVSNM 191 +V+ D E LT E +++L+ + L+ I D + + TV+ HV ++ Sbjct: 138 TYEVSYDNEVLSLTRKEYSILELLLRNGRRVLSRSMIIDSIWKLESPPEEDTVKVHVRSL 197 Query: 192 LNK 194 K Sbjct: 198 RQK 200 >SYNE-PCC-01-001075 sll1592 Length = 226 Score = 58.9 bits (141), Expect = 1e-11 Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 15/188 (7%) Query: 37 AGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQ-NPDISWIPVMFLSAKGQSHN 95 A +G A+ + + D+++ D+ +P + G Q+++ +P + PV+ L++ Q Sbjct: 39 AEDGETAIAYVNQQLFDVVILDVGLPGIGGIEACHQIKKIHPQL---PVLILTSHSQPAL 95 Query: 96 RVKGLNVGADIYMAKPFEPEELAAQVQSCL-----------RQADRLLQHNNHPLEDNAR 144 + + A Y K E L ++S ++ QH++ Sbjct: 96 INRLIEAQAQGYCVKGVAAETLVLAIRSVAAGAFWWDAIASQEIQTAFQHSSSTGAVLPL 155 Query: 145 VQVARDVELTPTETKVIQLVAQGLANREIADHLKVSQRTVESHVSNMLNKTGLHNRTELA 204 + LT E +++ LVA+G +N+EIAD L ++ TV HV +L K + +RT+ A Sbjct: 156 ADADGENPLTKRELEILSLVAKGKSNQEIADELYIAPGTVRVHVHTILRKLEVRDRTQAA 215 Query: 205 RWAIQKSI 212 AI++ + Sbjct: 216 LLAIERRL 223 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 57.0 bits (136), Expect = 5e-11 Identities = 29/89 (32%), Positives = 50/89 (56%) Query: 31 GYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIPVMFLSAK 90 G+ V A NG A+ L + P +I+ D+ MP +DG + ++++ +P ++ L+A Sbjct: 441 GFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRSTTQKIKASPQGQHTIIIALTAS 500 Query: 91 GQSHNRVKGLNVGADIYMAKPFEPEELAA 119 R + L+ G D +++KPF PEEL A Sbjct: 501 AFEGERAEILSAGCDDFLSKPFRPEELIA 529 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 55.1 bits (131), Expect = 2e-10 Identities = 32/99 (32%), Positives = 56/99 (56%), Gaps = 4/99 (4%) Query: 32 YQVTTAGNGREALDLLTT--TVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIPVMFLSA 89 Y V +G +A D L T + + D ++P + G +++R + +PV+ L+A Sbjct: 25 YVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSGLELCQKLRTQGNS--LPVLMLTA 82 Query: 90 KGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQA 128 G+ NRV+GL+ GAD Y+ KPF EL A++++ R++ Sbjct: 83 LGEPENRVEGLDAGADDYLTKPFVMAELLARLRALQRRS 121 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 53.9 bits (128), Expect = 4e-10 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 1/93 (1%) Query: 31 GYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIP-VMFLSA 89 GY V A NG+E +D L D+++ D+ MP MDG +RQ + P ++ ++A Sbjct: 1213 GYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGITACRHIRQTLPLERQPRIVAMTA 1272 Query: 90 KGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQ 122 +R + L+ G D Y++KP +L +Q Sbjct: 1273 NAMPGDRQECLDAGMDGYISKPISINQLRKVLQ 1305 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 52.4 bits (124), Expect = 1e-09 Identities = 28/78 (35%), Positives = 48/78 (61%), Gaps = 2/78 (2%) Query: 54 MIVCDIMMPEMDGYAFIEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFE 113 + + D M+P + G +++R S +P++ L+AK Q +RV+GL+ GAD Y+ KPF Sbjct: 49 LAIFDWMVPGLSGLELCQKLRGQR--SSLPILMLTAKDQIADRVEGLDAGADDYLIKPFG 106 Query: 114 PEELAAQVQSCLRQADRL 131 EL A+++S R++ L Sbjct: 107 MAELLARLRSLQRRSPEL 124 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 50.4 bits (119), Expect = 4e-09 Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 12/127 (9%) Query: 26 YLEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIE---QVRQNPDISWI 82 YL+ +G++V A NG EAL P++++ D +MP MDG+A + ++ QNP Sbjct: 30 YLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGFACCQALMKIYQNPSPL-- 87 Query: 83 PVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQADRLLQHN----NHP 138 V+ ++ + + GA Y+ KP L +V+ L Q LQH N Sbjct: 88 -VLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLLYQ--NRLQHQLESVNQM 144 Query: 139 LEDNARV 145 LE A+V Sbjct: 145 LERLAKV 151 >SYNE-PCC-01-000877 sll1330 Length = 250 Score = 50.1 bits (118), Expect = 6e-09 Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 18/184 (9%) Query: 26 YLEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIPVM 85 +L+ GY V +A +P + V D + + DG + Q + Sbjct: 22 HLQQSGYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGDGIELCRWLYQQHQSM---IF 78 Query: 86 FLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQ-----ADRLLQHNNHPLE 140 LSAK + V GL GAD Y+ KPF +E A+++ +R+ A LL + ++ Sbjct: 79 ILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLIRRVRTVAAPLLLDYGVLKID 138 Query: 141 -DNARVQVARD-VELTPTETKVIQLVAQGLAN--------REIADHLKVSQRTVESHVSN 190 RV+ + V+LTP E ++ ++ Q + R + RT+++HV + Sbjct: 139 LVQRRVEYQGNFVDLTPQEFSLLYVLTQAEGSALSRTELLRRAWPEAIDNPRTIDTHVLS 198 Query: 191 MLNK 194 + K Sbjct: 199 LRKK 202 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 48.1 bits (113), Expect = 2e-08 Identities = 25/82 (30%), Positives = 43/82 (52%) Query: 31 GYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAFIEQVRQNPDISWIPVMFLSAK 90 G+++ A NG+EA+ L + P +I D+ MP MDGY + ++ + V+ L+A Sbjct: 653 GFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYEATKYIKGQVKGNATAVVALTAS 712 Query: 91 GQSHNRVKGLNVGADIYMAKPF 112 + L+ G D ++ KPF Sbjct: 713 VLEEEKAIVLSAGCDDFLRKPF 734 >SYNE-PCC-01-000511 sll0782 Length = 369 Score = 44.7 bits (104), Expect = 2e-07 Identities = 20/48 (41%), Positives = 33/48 (68%) Query: 153 LTPTETKVIQLVAQGLANREIADHLKVSQRTVESHVSNMLNKTGLHNR 200 L+ E +++ L+AQGL +R+IA+ L +S+ TV+ HV+ L+K NR Sbjct: 309 LSEREKEIVSLLAQGLRDRDIAEELHISESTVKFHVNGTLHKLNAKNR 356 >SYNE-PCC-01-002221 slr1213 Length = 241 Score = 43.9 bits (102), Expect = 4e-07 Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 10/156 (6%) Query: 27 LEYQGYQVTT-AGNGREALDLLTTTVPDMIVCDIMMP-EMDGYAFIEQVRQNPDISWIPV 84 L+ GY++ A +G AL + PD+++ DI + E+DG E+++ + IP+ Sbjct: 22 LKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEIDGIEVAERIKS---LYSIPI 78 Query: 85 MFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCLRQADRLLQHNNHPLEDNAR 144 ++L+A + Y+ KPF E+L + V + Q P ED Sbjct: 79 VYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTVAIAIANH----QQQRKPEEDTLS 134 Query: 145 VQVARDVELTPTETKVIQLVAQGLANREIADHLKVS 180 L PT + + + QG+ +A + +S Sbjct: 135 TSTGH-YRLQPTLDYIEEHLDQGITVEFLAGAIGMS 169 >SYNE-PCC-01-001039 sll1544 Length = 228 Score = 41.6 bits (96), Expect = 2e-06 Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 5/103 (4%) Query: 103 GAD-IYMAKPFEPEELAAQVQSCLRQADRLLQHNNHPLEDNARVQVARDVELTPTETKVI 161 GAD I++ E+ V+ CL Q + + D + Q +D ELT E ++ Sbjct: 120 GADAIFLESSLGNGEINLAVE-CLLQGRTYIDSRLEAIADYRKSQ--KD-ELTQREVAIL 175 Query: 162 QLVAQGLANREIADHLKVSQRTVESHVSNMLNKTGLHNRTELA 204 +LVA+G N EI L ++ TV +V ++ K +RT A Sbjct: 176 RLVAEGKTNSEIGQELHLASSTVREYVQTIMRKLNARDRTSAA 218 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.317 0.131 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,166 Number of Sequences: 78 Number of extensions: 728 Number of successful extensions: 64 Number of sequences better than 1.0e-05: 36 Number of HSP's better than 0.0 without gapping: 34 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 8 Number of HSP's gapped (non-prelim): 39 length of query: 213 length of database: 48,235 effective HSP length: 59 effective length of query: 154 effective length of database: 43,633 effective search space: 6719482 effective search space used: 6719482 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 91 (39.7 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-002778 slr1969 (750 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-002778 slr1969 1407 0.0 SYNE-PCC-01-002617 slr1759 171 1e-44 SYNE-PCC-01-000295 sll0474 152 3e-39 SYNE-PCC-01-000800 sll1228 147 1e-37 SYNE-PCC-01-001517 slr0222 136 3e-34 SYNE-PCC-01-001280 sll1871 135 4e-34 SYNE-PCC-01-002879 slr2104 134 1e-33 SYNE-PCC-01-001132 sll1672 130 1e-32 SYNE-PCC-01-002873 slr2098 129 3e-32 SYNE-PCC-01-002220 slr1212 126 3e-31 SYNE-PCC-01-001509 slr0210 121 9e-30 SYNE-PCC-01-001306 sll1905 118 7e-29 SYNE-PCC-01-000891 sll1353 115 6e-28 SYNE-PCC-01-000985 sll1475 109 3e-26 SYNE-PCC-01-000983 sll1473 100 2e-23 SYNE-PCC-01-000542 sll0821 99 5e-23 SYNE-PCC-01-001294 sll1888 96 3e-22 SYNE-PCC-01-001690 slr0473 74 1e-15 >SYNE-PCC-01-002778 slr1969 Length = 750 Score = 1407 bits (3642), Expect = 0.0 Identities = 724/750 (96%), Positives = 724/750 (96%) Query: 1 MLPAFSPIFRRLLPAVTFERLLRFWRTLAQQTGDGVQCFVGDXXXXXXXXXXXXXXEAEV 60 MLPAFSPIFRRLLPAVTFERLLRFWRTLAQQTGDGVQCFVGD EAEV Sbjct: 1 MLPAFSPIFRRLLPAVTFERLLRFWRTLAQQTGDGVQCFVGDLPSSLKPPPGPSVLEAEV 60 Query: 61 DHRFALLVSPGQWALLEGEQISPHHYAVSITFAQGIIEDFIQKQNLPVVAEAMPHRPETP 120 DHRFALLVSPGQWALLEGEQISPHHYAVSITFAQGIIEDFIQKQNLPVVAEAMPHRPETP Sbjct: 61 DHRFALLVSPGQWALLEGEQISPHHYAVSITFAQGIIEDFIQKQNLPVVAEAMPHRPETP 120 Query: 121 SGPTIAEQLTLGLLEILNSDSTSFSPEPSLQDSLQASQVKLLSQVIAQIRQSLDLSEILN 180 SGPTIAEQLTLGLLEILNSDSTSFSPEPSLQDSLQASQVKLLSQVIAQIRQSLDLSEILN Sbjct: 121 SGPTIAEQLTLGLLEILNSDSTSFSPEPSLQDSLQASQVKLLSQVIAQIRQSLDLSEILN 180 Query: 181 NAVTAVQKFLFVDRLVIYQFHYSQPSLTPLEENQIPAPRPRQQYGEVTYEARRSPEIDTM 240 NAVTAVQKFLFVDRLVIYQFHYSQPSLTPLEENQIPAPRPRQQYGEVTYEARRSPEIDTM Sbjct: 181 NAVTAVQKFLFVDRLVIYQFHYSQPSLTPLEENQIPAPRPRQQYGEVTYEARRSPEIDTM 240 Query: 241 LGIMTENDCFSQVFSYEQKYLKGAVVAVSDIENHYSSSYCLVGLLQRYQVRAKLVAPIIV 300 LGIMTENDCFSQVFSYEQKYLKGAVVAVSDIENHYSSSYCLVGLLQRYQVRAKLVAPIIV Sbjct: 241 LGIMTENDCFSQVFSYEQKYLKGAVVAVSDIENHYSSSYCLVGLLQRYQVRAKLVAPIIV 300 Query: 301 EGQLWGLLIAHQCHHPRQWLDSEKNFLGQIGEHLAVAIVQSLLYSEVQKQKNNFEKRVIE 360 EGQLWGLLIAHQCHHPRQWLDSEKNFLGQIGEHLAVAIVQSLLYSEVQKQKNNFEKRVIE Sbjct: 301 EGQLWGLLIAHQCHHPRQWLDSEKNFLGQIGEHLAVAIVQSLLYSEVQKQKNNFEKRVIE 360 Query: 361 RTKELRDTLMAAQAANLLKSQFINNISHELRTPLTSIIGLSATLLRWFDHPASLPPAKQQ 420 RTKELRDTLMAAQAANLLKSQFINNISHELRTPLTSIIGLSATLLRWFDHPASLPPAKQQ Sbjct: 361 RTKELRDTLMAAQAANLLKSQFINNISHELRTPLTSIIGLSATLLRWFDHPASLPPAKQQ 420 Query: 421 YYLLNIQENGKKLLDQINSIIQLSQLESGQTALNCQSFSLHTLAQTVIHSLLGVAIKQQI 480 YYLLNIQENGKKLLDQINSIIQLSQLESGQTALNCQSFSLHTLAQTVIHSLLGVAIKQQI Sbjct: 421 YYLLNIQENGKKLLDQINSIIQLSQLESGQTALNCQSFSLHTLAQTVIHSLLGVAIKQQI 480 Query: 481 NLELDYQINVGQDQFCADQERLDQILTQLLNNALKFTPAEGTVILRIWKESNQAIFQVED 540 NLELDYQINVGQDQFCADQERLDQILTQLLNNALKFTPAEGTVILRIWKESNQAIFQVED Sbjct: 481 NLELDYQINVGQDQFCADQERLDQILTQLLNNALKFTPAEGTVILRIWKESNQAIFQVED 540 Query: 541 TGIGINEQQLPVLFEAFKVAGDSYTSFYETGGVGLALTKQLVELHGGYIEVESSPGQGTI 600 TGIGINEQQLPVLFEAFKVAGDSYTSFYETGGVGLALTKQLVELHGGYIEVESSPGQGTI Sbjct: 541 TGIGINEQQLPVLFEAFKVAGDSYTSFYETGGVGLALTKQLVELHGGYIEVESSPGQGTI 600 Query: 601 FTTVIPQQNFPPTTKGQVQDKLDAAMPFNSSVIVIEQDEEIATLICELLTVANYQVIWLI 660 FTTVIPQQNFPPTTKGQVQDKLDAAMPFNSSVIVIEQDEEIATLICELLTVANYQVIWLI Sbjct: 601 FTTVIPQQNFPPTTKGQVQDKLDAAMPFNSSVIVIEQDEEIATLICELLTVANYQVIWLI 660 Query: 661 DTTNALQQVELLQPGLIIVDGDFVDVTEVTRGIKKSRRISKVTVFLLSESLSSAEWQALS 720 DTTNALQQVELLQPGLIIVDGDFVDVTEVTRGIKKSRRISKVTVFLLSESLSSAEWQALS Sbjct: 661 DTTNALQQVELLQPGLIIVDGDFVDVTEVTRGIKKSRRISKVTVFLLSESLSSAEWQALS 720 Query: 721 QKGIDDYXXXXXXXXXXXXRVQSIQQEPLR 750 QKGIDDY RVQSIQQEPLR Sbjct: 721 QKGIDDYLLKPLQPELLLQRVQSIQQEPLR 750 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 171 bits (432), Expect = 1e-44 Identities = 139/510 (27%), Positives = 235/510 (46%), Gaps = 61/510 (11%) Query: 151 QDSLQA--SQVKLLSQVIAQIRQSLDLSEILNNAVTAVQKFLFVDRLVIYQFHYSQPSLT 208 QD LQ +Q+ L+ ++ +IR+SL + I A V V R +I+ + + Sbjct: 575 QDILQKKLNQILLMRKISQEIRRSLQPTLIFQTAARQVGNVFAVSRCLIHNYSEATTLQV 634 Query: 209 PLEENQIPAPRPRQQYGEVTYEARRSPEIDTMLGIMTENDCFSQVFSYEQKYLKG-AVVA 267 P+ + GE+ E P I ++G +A Sbjct: 635 PVVAEYLGGQFTSLLAGEIAVEQAYDPTI-----------------------IQGDRAMA 671 Query: 268 VSDIENHYSSSYCLVGLLQRYQVRAKLVAPIIVEGQLWGLLIAHQCHHPRQWLDSEKNFL 327 V D++ +S++ QR+QV++ L +G+ G++ HQC R W E L Sbjct: 672 VVDLDQDLNSTHTKA-FYQRFQVKSFLAVRTSYQGKANGIIALHQCDRQRVWTADEIELL 730 Query: 328 GQIGEHLAVAIVQSLLYSEVQKQKNNFEKRVIERTKELRDTLMAAQAANLLKSQFINNIS 387 I E + +A+ Q+ L + ++++ + + ++ EL AA+AAN K +F+ +S Sbjct: 731 EAIAEQMGIALAQAALLEKERERR----RELAQKNLELEKATWAAEAANRAKGEFLAMMS 786 Query: 388 HELRTPLTSIIGLSATLLRWFDHPASLPPAKQQYYLLNIQENGKKLLDQINSIIQLSQLE 447 HE+RTP+ +IG++ L+ + +Q Y+ I+++G+ LL IN I+ S++E Sbjct: 787 HEIRTPMNGVIGMTELLIMTDLN------LQQLDYVQTIRQSGETLLTIINDILDFSKIE 840 Query: 448 SGQTALNCQSFSLHTLAQTVIHSLLGVAIKQQINLELDYQINVGQD-QFCADQERLDQIL 506 + + L Q+F L L +TV+ +A + +LEL Y I+ + DQ RL QIL Sbjct: 841 ADKLVLETQAFELRPLIETVLEMFGPIARAK--HLELTYGIDPQTPARILGDQVRLRQIL 898 Query: 507 TQLLNNALKFT---------------PAEGT-VILRIWKESNQAIFQVEDTGIGINEQQL 550 + L+ NALKFT PAE IL + S++ F + DTGIGI + Sbjct: 899 SNLIGNALKFTEKGEVVLTVKGEPFDPAESYHTILNLPHPSHRICFNLRDTGIGIPLDRQ 958 Query: 551 PVLFEAFKVAGDSYTSFYETGGVGLALTKQLVELHGGYIEVESSPGQGTIFTTVIPQQNF 610 LF++F S T Y G+GL ++++L ++ GG + V S PG G+ F I Sbjct: 959 DRLFKSFSQVDSSTTRKYGGTGLGLVISQRLTQMMGGVLTVTSEPGVGSNFRFCI----- 1013 Query: 611 PPTTKGQVQDKLDAAMPFNSSVIVIEQDEE 640 T + + D+ ++I D E Sbjct: 1014 LTTAQAPALAEADSVQQMKGKQVLIVDDNE 1043 >SYNE-PCC-01-000295 sll0474 Length = 806 Score = 152 bits (385), Expect = 3e-39 Identities = 107/318 (33%), Positives = 165/318 (51%), Gaps = 20/318 (6%) Query: 355 EKRVIERTKELRDTLMAAQAANLLKSQFINNISHELRTPLTSIIGLSATLLRWFDHPASL 414 E + E +L + ++A A LK +F+ N+SHELRTPL SI+G+ TL P + Sbjct: 396 EIKKAEEQLKLSNKILAK--ATQLKDEFLANMSHELRTPLNSILGMIETLQNQVYGPLN- 452 Query: 415 PPAKQQYYLLNIQENGKKLLDQINSIIQLSQLESGQTALNCQSFSLHTLAQTVIHSLLGV 474 KQ L ++ +G+ LL IN I+ LS++E+G+ L+ S+ L + + Sbjct: 453 --GKQVQSLEIVENSGRHLLSLINDILDLSKIEAGRMDLDLNPTSVSALVNHSLTFVQQF 510 Query: 475 AIKQQINLELDYQINVGQDQFCADQERLDQILTQLLNNALKFTPAEGTVILRI------W 528 AI++QINL + N+ D+ RL Q+L LLNNA+KFTP G V+++ Sbjct: 511 AIQKQINLSSEIIPNL--PDVLVDKRRLCQVLINLLNNAIKFTPEGGKVVVQADLIKEQG 568 Query: 529 KESNQA----IFQVEDTGIGINEQQLPVLFEAFKVAGDSYTSFYETGGVGLALTKQLVEL 584 KE++Q+ F V DTGIGI +L +FE F + Y+ G+GL+L K++VEL Sbjct: 569 KENSQSPPQLSFTVFDTGIGIEADRLNNIFEPFVQIDSALNRRYDGTGLGLSLVKKIVEL 628 Query: 585 HGGYIEVESSPGQGTIFTTVIP---QQNFPPTTKGQVQDKLDAAMPFNSSVIVIEQDEEI 641 HGG + V S +G+ F IP Q P +GQ+ + + P + +I ++ Sbjct: 629 HGGSVTVTSKLNEGSRFKITIPCVFQDKDGPRHRGQLVEVTNHGSPTPIIITLISKNSAY 688 Query: 642 ATLICELLTVANYQVIWL 659 AT + YQ+ WL Sbjct: 689 ATTLSSYFRAKGYQMQWL 706 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 147 bits (371), Expect = 1e-37 Identities = 138/477 (28%), Positives = 218/477 (45%), Gaps = 42/477 (8%) Query: 266 VAVSDIENHYSSSYCLVGLLQRYQVRAKLVAPIIVEGQLWGLLIAHQCHHPRQWLDSEKN 325 V V D+E + LQ V++ LV P++ + Q+ G + H W E N Sbjct: 68 VLVRDVEQMPPEAEMDKVSLQFDLVKSILVVPMVKDAQVLGYISMVHLHDNYGWNPEELN 127 Query: 326 FLGQIGEHLAVAIVQSLLYSEVQKQKNNFEKRVIERTKELRDTLMAAQAANLLKSQFINN 385 +G+ LA+A Q + + + + KE AA AAN K++F+ + Sbjct: 128 LAKLVGQFLAIA------------QARHQAETTLTQAKE------AADAANRAKTEFLAS 169 Query: 386 ISHELRTPLTSIIGLSATLLRWFDHPASLPPAKQQYYLLNIQENGKKLLDQINSIIQLSQ 445 ISHELRTPL +IIG S L R SL P + ++N +G+ LL+ IN I+++S+ Sbjct: 170 ISHELRTPLNAIIGFSQLLHR----DPSLAPHRPTLDIIN--RSGEHLLELINDILEMSK 223 Query: 446 LESGQTALNCQSFSLHTLAQTVIHSLLGVAIKQQINLELDYQINVGQDQFCADQERLDQI 505 +E+G+T LN + H L + A ++Q+ L+++ V + D +L Q+ Sbjct: 224 IEAGRTTLNEKIIDCHRLLDNLQALFQLRAQEKQLLLKVERSPEV-PEWIKTDGGKLRQV 282 Query: 506 LTQLLNNALKFTPAEGTVILRI------WKESNQAI-----FQVEDTGIGINEQQLPVLF 554 L LL NA+KFT A+G V L++ + Q F V DTG GI ++ LF Sbjct: 283 LINLLANAIKFT-AQGGVTLKVKCLTAPQTDEGQGASIWLHFLVSDTGPGIAAHEMDELF 341 Query: 555 EAFKVAGDSYTSFYETGGVGLALTKQLVELHGGYIEVESSPGQGTIFTTVIPQQNF--PP 612 F S + G+GL ++++ V+L GG I+V S QG+ F IP Q P Sbjct: 342 VPFAQTETGLKS-CQGNGLGLPISQKFVQLMGGQIQVRSKVDQGSAFFFAIPVQVMAAPK 400 Query: 613 TTKGQVQDKLDAAMPFNSSVIVIEQDEEIATLICELLTVANYQVIWLIDTTNALQQVELL 672 T L +N V+V++ E L+ +LLT + V + A+ E Sbjct: 401 PTPETSAVTLPPLDQYNQKVLVVDDRPESRLLLRQLLTSLGFVVQEAENGEMAIALWESW 460 Query: 673 QPGLIIVDGDF--VDVTEVTRGIKKSRRISKVTVFLLSESLSSAEWQALSQKGIDDY 727 P +I++D +D T+ IK S + + L+ S E + G DD+ Sbjct: 461 HPQVILMDMQMPVLDGRSTTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDF 517 >SYNE-PCC-01-001517 slr0222 Length = 1178 Score = 136 bits (342), Expect = 3e-34 Identities = 85/244 (34%), Positives = 130/244 (53%), Gaps = 7/244 (2%) Query: 368 TLMAAQAANLLKSQFINNISHELRTPLTSIIGLSATLLRWFDHPASLPPAKQQYYLLNIQ 427 +L+ + N KSQF++ +SHE RTPLTSIIG L ++FD L K+Q Y+ NIQ Sbjct: 929 SLVKERELNEAKSQFVDIVSHEFRTPLTSIIGFGELLSKYFDR---LSTEKKQQYINNIQ 985 Query: 428 ENGKKLLDQINSIIQLSQLESGQTALNCQSFSLHTLAQTVIHSLLGVAIKQQINLELDYQ 487 + ++L I+ ++ +S+ ++ + + + +L LA +I + + + N EL+Y Sbjct: 986 NSSQRLKQLIDDVLSISRYDANKIEIELGNINLRNLANDLIEN-FSCGLGSEHNFELNYH 1044 Query: 488 INVGQDQFCADQERLDQILTQLLNNALKFTPAEGTVILRIWKESNQAIFQVEDTGIGINE 547 + + D L IL +L+NA+K++ T+ L I K+ +FQV D GIGI Sbjct: 1045 LKPDEHSL-VDVRLLRHILENILSNAIKYSAPGSTITLDISKDEEHLLFQVRDEGIGIPL 1103 Query: 548 QQLPVLFEAFKVAGDSYTSFYETGGVGLALTKQLVELHGGYIEVESSPGQGTIFTTVIPQ 607 Q LFEAF A S G+GL++ K+ VE GG IEV S PG+GT +P Sbjct: 1104 QDQEKLFEAFHRA--SNVGDIPGTGLGLSIVKRYVEFQGGTIEVISMPGKGTTMVIKLPL 1161 Query: 608 QNFP 611 P Sbjct: 1162 NPAP 1165 >SYNE-PCC-01-001280 sll1871 Length = 674 Score = 135 bits (340), Expect = 4e-34 Identities = 93/264 (35%), Positives = 153/264 (57%), Gaps = 17/264 (6%) Query: 355 EKRVIERTKELRDTLMA-------AQAANLLKSQFINNISHELRTPLTSIIGLSATLLRW 407 E++V +RT+EL +T+ A A+AAN KS F+ N+SHELRTPL +IIG S L+ Sbjct: 407 EEKVQQRTEELENTVKALELASSEAEAANATKSIFLANMSHELRTPLNAIIGYSEMLI-- 464 Query: 408 FDHPASLPPAKQQYYLLNIQENGKKLLDQINSIIQLSQLESGQTALNCQSFSLHTLAQTV 467 + L + L I +GK LL IN ++ +S++E+G+ L ++F+L L + Sbjct: 465 -EEAEDLDSEELVPDLDKILRSGKSLLALINDLLDISKIEAGKMELYLETFNLKELIAGI 523 Query: 468 IHSLLGVAIKQQINLELDYQINVGQDQFCADQERLDQILTQLLNNALKFTPAEGTV--IL 525 + ++ + + N +L+ +I++ ++ D +L Q + LL+NA KFT +G + I+ Sbjct: 524 LDTIS--PLLKNNNNKLEVEISLESEEVYGDLIKLRQGILNLLSNASKFTK-DGIISFIV 580 Query: 526 RIWK--ESNQAIFQVEDTGIGINEQQLPVLFEAFKVAGDSYTSFYETGGVGLALTKQLVE 583 +K E + FQV+DTGIG+ E+Q+ LF+ F A S T Y G+GLA+T++ + Sbjct: 581 EEFKVDEKDWLSFQVKDTGIGLTEEQMSKLFQPFTQADSSTTRKYGGTGLGLAITRKFCQ 640 Query: 584 LHGGYIEVESSPGQGTIFTTVIPQ 607 + GG I + S G G+ FT +P+ Sbjct: 641 MMGGDIYLTSEIGVGSSFTIKLPK 664 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 134 bits (336), Expect = 1e-33 Identities = 95/261 (36%), Positives = 147/261 (56%), Gaps = 24/261 (9%) Query: 355 EKRVIERTKELRDTL-------MAAQAANLLKSQFINNISHELRTPLTSIIGLSATLLRW 407 E+R+ ERT+EL ++ + A+ A KS+F+ N+SHE+RTP+ +IIG+S +L+ Sbjct: 427 EQRIQERTQELENSQESLLEAKLVAEGATKAKSEFLANMSHEIRTPMNAIIGMSELVLQ- 485 Query: 408 FDHPASLPPAKQQYYLLNIQENGKKLLDQINSIIQLSQLESGQTALNCQSFSLHTLAQTV 467 + ++Q+ YL +Q G+ LL IN+I+ S++E+G+ L + FS+ + Sbjct: 486 -----TDLTSQQRNYLQKVQYAGELLLGIINNILDFSKMEAGKLELEQKPFSVEEVMGN- 539 Query: 468 IHSLLGVAIKQQ---INLELDYQINVGQDQFCADQERLDQILTQLLNNALKFT-PAEGTV 523 +HS+LG+ + + +N LD +I D+ RL QIL L NNA+KFT E T+ Sbjct: 540 LHSILGIQAEAKGLTLNFHLDPRI---PPILVGDRLRLSQILINLGNNAVKFTNQGEITI 596 Query: 524 ---ILRIWKESNQAIFQVEDTGIGINEQQLPVLFEAFKVAGDSYTSFYETGGVGLALTKQ 580 +L+ E + F V DTGIG+ Q LF+ F S + Y G+GLA++K Sbjct: 597 RGQLLKTENEQTKLQFSVTDTGIGLTPDQQSKLFQWFNQGETSTSRQYGGTGLGLAISKS 656 Query: 581 LVELHGGYIEVESSPGQGTIF 601 L EL GG I +ES GQG+ F Sbjct: 657 LTELMGGDIWLESVVGQGSTF 677 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 130 bits (327), Expect = 1e-32 Identities = 119/415 (28%), Positives = 199/415 (47%), Gaps = 38/415 (9%) Query: 343 LYSEVQKQKNNFEKRVIERTKELRDTLMAAQAANLL------KSQFINNISHELRTPLTS 396 LY + + ++ EK +IE + L+ + +A + KS F+ N+SHELR+PL + Sbjct: 323 LYQQRELERAQREKILIEYNESLQKQVDLVRAKEIAESEAKAKSTFVANMSHELRSPLNA 382 Query: 397 IIGLSATLLRWFDHPASLPPAKQQYYLLN-IQENGKKLLDQINSIIQLSQLESGQTALNC 455 IIG S +LR + P +QY IQ +G+ LL+ IN+I+ S++E+G+T LN Sbjct: 383 IIGFSQLMLRTKNLP------MEQYENAGIIQRSGEYLLNLINNILDFSKIEAGKTHLNR 436 Query: 456 QSFSLHTLAQTVIHSLLGVAIKQQINLELDYQINVGQDQFCADQERLDQILTQLLNNALK 515 +F L+ L + L A + I L ++ + + D+ +L QIL LL+NA+K Sbjct: 437 HNFDLYLLLDDLEDMLHLKAANEGIELIFIRDHDLPRYVY-GDEIKLRQILLNLLSNAIK 495 Query: 516 FTPAEGTVILRIWKESNQ-----------------AIFQVEDTGIGINEQQLPVLFEAFK 558 FT V+ ++ + Q F ++DTG GI+E +L LFEAF Sbjct: 496 FTTEGEVVLTSNFRNAEQQEVINPETSTEPKNKYWLDFTIKDTGKGISEVELSHLFEAFS 555 Query: 559 VAGDSYTSFYETGGVGLALTKQLVELHGGYIEVESSPGQGTI--FTTVIPQQNFPPTTKG 616 +S + E G+GLA+T+Q ++L GG I V S QGT F+ ++ + + Sbjct: 556 QT-ESGRNAQEGTGLGLAITRQFIKLMGGDINVSSVVDQGTTFSFSILVDLGEITLSREP 614 Query: 617 QVQDKLDAAMPFNS--SVIVIEQDEEIATLICELLTVANYQVIWLIDTTNALQQVELLQP 674 K+ A P ++V++ L+ +LL +++ + A+ E +P Sbjct: 615 NSAKKVLALTPGQPVYKILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEP 674 Query: 675 GLIIVD--GDFVDVTEVTRGIKKSRRISKVTVFLLSESLSSAEWQALSQKGIDDY 727 LI +D +D E T+ IK + + V L+ S+ E + G DD+ Sbjct: 675 HLIFMDMRMPVMDGYEATKYIKGQVKGNATAVVALTASVLEEEKAIVLSAGCDDF 729 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 129 bits (324), Expect = 3e-32 Identities = 107/380 (28%), Positives = 185/380 (48%), Gaps = 30/380 (7%) Query: 359 IERTKELRDTLMAAQAANLLKSQFINNISHELRTPLTSIIGLSATLLRWFDHPASLPPAK 418 ++R KEL A+ A+ +K+ F+ N+SHE+RTP+ ++IG++ L+ L P + Sbjct: 513 MKRAKEL------AEEASRIKADFLANMSHEIRTPMNAVIGMTHLALK-----TDLTP-R 560 Query: 419 QQYYLLNIQENGKKLLDQINSIIQLSQLESGQTALNCQSFSLHTLAQTVIHSLLGVAIKQ 478 Q+ YL I+ +G+ LL IN I+ S++E+G+ + F L + V + A + Sbjct: 561 QREYLHKIRFSGQHLLGVINDILDFSKIEAGKLPMESIDFDLDKVLDNVATLISEKATNK 620 Query: 479 QINLELDYQINVGQDQFCADQERLDQILTQLLNNALKFTP-AEGTVILRIWKESNQAI-- 535 + L D N+ + F D RL QIL NNA+KFT + T+++R+ + +Q + Sbjct: 621 GLELLFDIDRNLPR-HFIGDPLRLGQILINYANNAVKFTEQGDITIVVRLQEYRDQDVVL 679 Query: 536 -FQVEDTGIGINEQQLPVLFEAFKVAGDSYTSFYETGGVGLALTKQLVELHGGYIEVESS 594 V+DTGIGI + + LF +F+ A S T + G+GLA+ K++ EL GG + VES Sbjct: 680 YLAVKDTGIGIKPEHIANLFNSFQQADSSTTRNFGGTGLGLAICKRIAELMGGEVGVESE 739 Query: 595 PGQGTIFTTVIPQQNFPPTTKGQVQDKLDAAMPFNSSVIVIEQDEEIATLIC-ELLTVAN 653 GQG+ F + Q + +L + +++ D + A L+ +LL Sbjct: 740 YGQGSTFWAKVCLQK-----SNVIPHRLVLSKDLEGKRVLVVDDNDHARLVMKDLLEQMK 794 Query: 654 YQVIWLIDTTNALQQV-----ELLQPGLIIVDGDF--VDVTEVTRGIKKSRRISKVTVFL 706 + V + AL + E ++ +D +D EV R +K + ++F+ Sbjct: 795 FVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPNMDGLEVARRLKAMGLNHQPSIFI 854 Query: 707 LSESLSSAEWQALSQKGIDD 726 ++ + GIDD Sbjct: 855 VTAYGREELFVKAKSLGIDD 874 >SYNE-PCC-01-002220 slr1212 Length = 844 Score = 126 bits (316), Expect = 3e-31 Identities = 109/399 (27%), Positives = 175/399 (43%), Gaps = 60/399 (15%) Query: 155 QASQVKLLSQVIAQIRQSLDLSEILNNAVTAVQKFLFVDRLVIYQFHYSQPSLTPLEENQ 214 Q + LL ++ +IRQSLDL I N V +++FL DR+VI+QF Sbjct: 456 QGRRESLLREITQRIRQSLDLPTIFNTVVQEIRQFLEADRVVIFQF-------------- 501 Query: 215 IPAPRPRQQYGEVTYEARRSPEIDTMLGIMTENDCFSQVFSYEQKYLKGAVVAVSDIENH 274 +P G + E+ +P ++ E CFS +Y Q+Y +G + + DI Sbjct: 502 --SPDSDFSVGNIVAESVLAP-FKPIINSAIEETCFSN--NYAQRYQQGRIQVIEDIHQS 556 Query: 275 YSSSYCLVGLLQRYQVRAKLVAPIIVEGQLWGLLIAHQCHHPRQWLDSEKNFLGQIGEHL 334 + C + L R QVRA LV P+I + LWGLL HQC R W +E + L QI Sbjct: 557 HLRQ-CHIDFLARLQVRANLVLPLINDAILWGLLCIHQCDSSRVWEQTEIDLLKQITNQF 615 Query: 335 AVAIVQSLLYSEVQKQKNNFEKRVIERTKELRDTLMAAQAANLLKSQFINNISHELRTPL 394 +AI Q+ LY + Q++ + + ++ T EL K + I H ++ L Sbjct: 616 EIAIQQATLYEQAQQELASKNQLFVQLTNELEQ-----------KKVLLKEIHHRVKNNL 664 Query: 395 TSIIGLSATLLRWFDHPASLPPAKQQYY-----LLNIQENGKKLLDQINSIIQLSQLESG 449 I S L++ ++ ++Y + I E + D N I SQ Sbjct: 665 Q--IMSSLLYLQFSKASPAIQQLSEEYQNRIQSMALIHEQLYRSEDLAN--IDFSQYLKN 720 Query: 450 QTALNCQSFSLHTLAQTVIHSLLGVAIKQQINLELDYQINVGQDQFCADQERLDQILTQL 509 T CQS+ +T S+ + +Q+ + L+ I +G I+ +L Sbjct: 721 LTHNICQSYGCNT------DSIKIKLLVEQVKVPLEQSIPLG------------LIIQEL 762 Query: 510 LNNALK--FTPAEGTVILRIWKESNQAIFQVEDTGIGIN 546 ++NALK F EG + ++ ++ QV D G+GI+ Sbjct: 763 VSNALKHAFPTTEGEISIKFTSMNSHYSLQVWDNGVGIS 801 >SYNE-PCC-01-001509 slr0210 Length = 417 Score = 121 bits (303), Expect = 9e-30 Identities = 84/225 (37%), Positives = 126/225 (56%), Gaps = 8/225 (3%) Query: 383 INNISHELRTPLTSIIGLSATLLRWFDHPASLPPAKQQYYLLNIQENGKKLLDQINSIIQ 442 +++I HE RTPLT+IIG A +LR D KQ Y+ + + LL +N + Sbjct: 190 LSHIHHEFRTPLTAIIGF-ARMLR--DELYGKLNPKQHQYVQGTLNSAEHLLSLVNDFLD 246 Query: 443 LSQLESGQTALNCQSFSLHTLAQTVIHSLLGVAIKQQINLELDYQINVGQDQFCADQERL 502 LS++++ L + ++ L VI + A ++Q+ L L I+ G D DQ R Sbjct: 247 LSKIDARCEELFYEQVAVEDLCLAVISMVQTKAKEKQLALNLT--IDDGVDFCYVDQRRW 304 Query: 503 DQILTQLLNNALKFTPAEGTVILRIWKESNQAIFQVEDTGIGINEQQLPVLFEAFKVAGD 562 QIL LL+N +KFTP +G+V L + IF V DTGIGI+ + LF+ FK Sbjct: 305 KQILINLLSNGVKFTP-KGSVTLAVKATDKALIFSVIDTGIGIDPEDQRDLFQPFKQISH 363 Query: 563 SYTSFYETG-GVGLALTKQLVELHGGYIEVESSPGQGTIFTTVIP 606 SF E G G+GLAL+++L +LHGG I++ S+PG G+ F+ ++P Sbjct: 364 P-PSFAEKGTGLGLALSRRLAQLHGGDIQLTSTPGVGSCFSAILP 407 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 118 bits (295), Expect = 7e-29 Identities = 88/259 (33%), Positives = 134/259 (51%), Gaps = 19/259 (7%) Query: 347 VQKQKNNFEKRV----IERTKELRDTLMAAQAANLLKSQFINNISHELRTPLTSIIGLSA 402 +Q Q E+R+ E+ +EL AA+AAN KS+F+ +SHE+RTP+ +IIG++ Sbjct: 285 IQGQSLEMERRMRQQLAEQNQELVAATTAAEAANRSKSEFLATMSHEIRTPMNAIIGMTG 344 Query: 403 TLLRWFDHPASLPPAKQQYYLLNIQENGKKLLDQINSIIQLSQLESGQTALNCQSFSLHT 462 LL D + +Q+Y+ I+ +G+ LL IN I+ S++E+G+ L F L Sbjct: 345 LLL---DTDLT---TQQKYFAQTIRNSGETLLTLINDILDFSKIEAGKLDLEVYPFDLGQ 398 Query: 463 LAQTVIHSLLGVAIKQQINLELDYQINVGQDQFCADQERLDQILTQLLNNALKFTPAEGT 522 + + ++ A ++ + L + + D RL QIL LL+NA+KFT A G Sbjct: 399 CLEEALDVVVPSARQKSLTLIRRFLTPI-PPNLQGDVTRLRQILVNLLSNAVKFTEA-GQ 456 Query: 523 VILRI-------WKESNQAIFQVEDTGIGINEQQLPVLFEAFKVAGDSYTSFYETGGVGL 575 V + + K Q F V+DTGIGI Q LF+AF S T + G+GL Sbjct: 457 VKVTVEVVDHDAAKGEYQICFAVQDTGIGIAPNQQQALFQAFSQGNSSITRRFGGTGLGL 516 Query: 576 ALTKQLVELHGGYIEVESS 594 A+ +L L GG I ES+ Sbjct: 517 AICVRLTALMGGTIWAESN 535 >SYNE-PCC-01-000891 sll1353 Length = 998 Score = 115 bits (287), Expect = 6e-28 Identities = 88/292 (30%), Positives = 141/292 (48%), Gaps = 41/292 (14%) Query: 347 VQKQKNNFEKRVIERTK---------------------ELRDTLMAAQAANLLKSQFINN 385 +++ K+N E RV ERT +LR+ +A+ AN +KS+F+ N Sbjct: 547 IKQAKDNLEMRVAERTHTLIVINKQLAGEIEERQRIEIKLREAKESAELANRVKSEFLAN 606 Query: 386 ISHELRTPLTSIIGLSATLLRWFDHPASLPPAKQQYYLLNIQENGKKLLDQINSIIQLSQ 445 ISHE+RTP+ +I+G LL+ L ++ + YL I + K LL I+ I+ +S+ Sbjct: 607 ISHEIRTPMNAILGFCDLLLQ-----KDLSLSQTKKYLNAIGSSSKILLALIDDILDISK 661 Query: 446 LESGQTALNCQSFSLHTLAQTV--IHSLLGVAIKQQINLELDYQINVGQDQFCADQERLD 503 +E+G+ ++ + L + + + I + + +++D +N D RL Sbjct: 662 IEAGKLVIHLEPVDLRVIIREIKQIFDYKAESKSLLLTIQIDETLN---QAIYFDAVRLR 718 Query: 504 QILTQLLNNALKFTPAEGTVILRIWKESNQA---------IFQVEDTGIGINEQQLPVLF 554 QIL L+ NALKFT EG V + I E Q +V DTGIGI + +F Sbjct: 719 QILFNLVGNALKFTE-EGQVFIYIGVEGIQVRSQGTYISLAIEVTDTGIGIAPEDQAKIF 777 Query: 555 EAFKVAGDSYTSFYETGGVGLALTKQLVELHGGYIEVESSPGQGTIFTTVIP 606 + F + T Y G+GL +T++L L GG I + S G+G+ F P Sbjct: 778 DVFTQSQGQSTRKYGGTGLGLTITRRLTALLGGEISLSSRLGEGSTFILHFP 829 >SYNE-PCC-01-000985 sll1475 Length = 297 Score = 109 bits (272), Expect = 3e-26 Identities = 80/263 (30%), Positives = 138/263 (52%), Gaps = 10/263 (3%) Query: 350 QKNNFEKRVIERTKELRDTLMAAQAANLLKSQFINNISHELRTPLTSIIGLSATLLRWFD 409 Q++ E+R RT+E+R L + + LK++F + SHE RTPL++ L+A L Sbjct: 43 QRDVTERR---RTEEVRLALEREKELSRLKTRFFSMASHEFRTPLST--ALAAAQLLENS 97 Query: 410 HPASLPPAKQQYYLLNIQENGKKLLDQINSIIQLSQLESGQTALNCQSFSLHTLAQTVIH 469 A L P K+ L IQ + K ++ ++ I+ +++ E+G+ N L L Q I Sbjct: 98 EVAWLDPDKRSRNLHRIQNSVKNMVQLLDDILIINRAEAGKLEFNPNWLDLKLLFQQFIE 157 Query: 470 SLLGVAIKQQINLELDYQINVGQDQFCADQERLDQILTQLLNNALKFTPAEGTVILRIWK 529 + +++ Q D+ + + D+ + IL+ LL+NA+K++P G + + + Sbjct: 158 EIQ-LSVSDQYYF--DFICSAQDTKALVDERLVRSILSNLLSNAIKYSPGGGQIKIALSL 214 Query: 530 ESNQAIFQVEDTGIGINEQQLPVLFEAFKVAGDSYTSFYETGGVGLALTKQLVELHGGYI 589 +S Q IF+V D GIGI+ + +FE F G + + T G+GL + K+ V+LH G I Sbjct: 215 DSEQIIFEVTDQGIGISPEDQKQIFEPFH-RGKNVRNITGT-GLGLMVAKKCVDLHSGSI 272 Query: 590 EVESSPGQGTIFTTVIPQQNFPP 612 ++S+ QGT T + + N P Sbjct: 273 LLKSAVDQGTTVTICLKRYNHLP 295 >SYNE-PCC-01-000983 sll1473 Length = 481 Score = 100 bits (248), Expect = 2e-23 Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 35/226 (15%) Query: 155 QASQVKLLSQVIAQIRQSLDLSEILNNAVTAVQKFLFVDRLVIYQFHYSQPSLTPLEENQ 214 Q + + ++Q+ IRQSL+L +LN V V+ L VDR++IY+ E Sbjct: 39 QTQRERFINQITQHIRQSLNLETVLNTTVAEVKTLLQVDRVLIYRIWQDGTGSAITESVN 98 Query: 215 IPAPRPRQQYGEVTYEARRSPEIDTMLGIMTENDCFSQVFSYEQKYLKGAVVAVSDIENH 274 P ++LG ++ F Y Q Y KG V A++DI+ Sbjct: 99 ANYP--------------------SILGRTFSDEVFP--VEYHQAYTKGKVRAINDIDQD 136 Query: 275 YSSSYCLVGLLQRYQVRAKLVAPIIVEGQ------------LWGLLIAHQCHHPRQWLDS 322 CL ++++ V++KLV PI+ + LWGLLI HQC R W Sbjct: 137 -DIEICLADFVKQFGVKSKLVVPILQHNRASSLDNESEFPYLWGLLITHQCAFTRPWQPW 195 Query: 323 EKNFLGQIGEHLAVAIVQSLLYSEVQKQKNNFEKRVIERTKELRDT 368 E + Q+ +A+AI QS LY ++Q+ + E RV +RT++L T Sbjct: 196 EVELMKQLANQVAIAIQQSELYEQLQQLNKDLENRVEKRTQQLAAT 241 >SYNE-PCC-01-000542 sll0821 Length = 1276 Score = 99.0 bits (245), Expect = 5e-23 Identities = 66/201 (32%), Positives = 108/201 (53%), Gaps = 25/201 (12%) Query: 150 LQDSLQASQVK--LLSQVIAQIRQSLDLSEILNNAVTAVQKFLFVDRLVIYQFHYSQPSL 207 L++ LQ VK L+ ++ +IR SL++++IL + VT V++FL DR+V+++F+ Sbjct: 913 LKERLQQRNVKEKLVLKIANKIRASLNINDILYSTVTEVRQFLNTDRVVLFKFN------ 966 Query: 208 TPLEENQIPAPRPRQQYGEVTYEARRSPEIDTMLGIMTENDCFSQVFSYEQKYLKGAVVA 267 Q G+V E+ +++ ++ CF Y + Y +G V A Sbjct: 967 -------------SQWSGQVVTESHND-FCRSIINDEIDDPCFKG--HYLRLYREGRVRA 1010 Query: 268 VSDIENHYSSSYCLVGLLQRYQVRAKLVAPIIVEGQLWGLLIAHQCHHPRQWLDSEKNFL 327 VSDIE + C LL+ YQV+A LV P++ LWGLLIAH+C PR W + + L Sbjct: 1011 VSDIEKADLAD-CHKELLRHYQVKANLVVPVVFNENLWGLLIAHECKTPRYWQEEDLQLL 1069 Query: 328 GQIGEHLAVAIVQSLLYSEVQ 348 ++ +A+AI Q LY +++ Sbjct: 1070 MELATQVAIAIHQGELYEQLE 1090 Score = 52.8 bits (125), Expect = 4e-09 Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 21/213 (9%) Query: 145 SPEPSLQDSLQASQVKLLSQVIAQIRQSLDLSEILNNAVTAVQKFLFVDRLVIYQFHYSQ 204 +P SL+D L+ VI + ++L L E L V + FL VDR+ IY+F S Sbjct: 2 NPNRSLEDFLR--------NVINKFHRALTLRETLQVIVEEARIFLGVDRVKIYKFA-SD 52 Query: 205 PSLTPLEENQIPAPRPRQ-----QYGEVTYEARRSPEIDTMLGIMTENDCFSQVFSYEQK 259 S L E A P ++ +AR E+ ++ + + S+E Sbjct: 53 GSGEVLAEAVNRAALPSLLGLHFPVEDIPPQARE--ELGNQRKMIAVDVAHRRKKSHE-- 108 Query: 260 YLKGAVVAVSDIENHYSS-SYCLVGLLQRYQVRAKLVAPIIVEGQLWGLLIAHQCHHPRQ 318 L G + HY++ C + L V + L P++ + QLWG++ H PR+ Sbjct: 109 -LSGRISPTEHSNGHYTTVDSCHIQYLLAMGVLSSLTVPVMQDQQLWGIMAVHH-SKPRR 166 Query: 319 WLDSEKNFLGQIGEHLAVAIVQSLLYSEVQKQK 351 + + E + + + +++AI QS L +V +Q+ Sbjct: 167 FTEQEWETMALLSKEVSLAITQSQLSRQVHQQQ 199 >SYNE-PCC-01-001294 sll1888 Length = 432 Score = 96.3 bits (238), Expect = 3e-22 Identities = 86/329 (26%), Positives = 145/329 (44%), Gaps = 35/329 (10%) Query: 295 VAPIIVEGQLWGLLIAHQCHH-PRQWLDSEKNFLGQIGEHLAVAIVQSLLYSEVQKQKNN 353 + P + + Q G L Q P W + L ++ E AI + LY Sbjct: 127 IFPTLYQDQANGYLCLQQVGPAPGPWHPETEALLQELAEQTGTAIAHATLY--------- 177 Query: 354 FEKRVIERTKELRDTLMAAQAANLLKSQFINNISHELRTPLTSIIGLSATLLRWFDHPAS 413 +EL AA+ A+ LKS+F+ + +HELRTPL IIG +L D A Sbjct: 178 ---------QELTQATKAAEEASRLKSEFLASTTHELRTPLNGIIGFLRLIL---DDMAD 225 Query: 414 LPPAKQQYYLLNIQENGKKLLDQINSIIQLSQLESGQTALNCQSFSLHTLAQTVIHSLLG 473 A++ ++ ++ LL+ IN I+ L+++E+G+ + + + Q + L Sbjct: 226 -SEAEKHEFVEEAYQSALLLLNLINDILDLAKIEAGRVGIELEVVDFSEVLQATENFALP 284 Query: 474 VAIKQQINLELDYQINVGQDQFCADQERLDQILTQLLNNALKFTPAEG----------TV 523 A + ++ L N G +Q L Q++ ++ NA+KFT G TV Sbjct: 285 QAQNKGLSFNLTAP-NQGPLLVYGNQRWLLQVMLNIVGNAIKFTHEGGITVAVEVMPRTV 343 Query: 524 ILRIWKESNQAIFQVEDTGIGINEQQLPVLFEAFKVAGDSYTSFYETGGVGLALTKQLVE 583 + ++ V DTGIG++ +Q LF+ F S++ Y G+GL ++++LVE Sbjct: 344 LWEGVQKPGLLKVSVGDTGIGVSLEQQSKLFKKFVQIDGSHSKAYGGTGLGLVISQKLVE 403 Query: 584 LHGGYIEVES-SPGQGTIFTTVIPQQNFP 611 GG + S G G+ T + + P Sbjct: 404 TMGGKVAFFSMGEGLGSTVTFTVLLEELP 432 >SYNE-PCC-01-001690 slr0473 Length = 748 Score = 74.3 bits (181), Expect = 1e-15 Identities = 83/304 (27%), Positives = 135/304 (44%), Gaps = 34/304 (11%) Query: 315 HPRQWLDSEKNFLGQIGEHLAVAIVQSLLYSEVQKQ-----KNNFEKRVIERTKELRDTL 369 HPRQ D K + +QSL + V+ Q K ++ + +EL Sbjct: 470 HPRQSFDLWKE----------IVRLQSLPWQSVEIQSALALKKAIVNLILRQAEELAQLA 519 Query: 370 MAAQAANLLKSQFINNISHELRTPLTSIIGLSATLLRWFDHPASLPPAKQQYYLLNIQEN 429 + +N +F SH+L+ PL + LL A AK ++ Sbjct: 520 RNLERSNADLKKFAYIASHDLQEPLNQVSNY-VQLLEMRYSEALDEDAKD---FIDFAVT 575 Query: 430 GKKLLDQ-INSIIQLSQLESGQTALNCQSFSLHTLAQTVIHSLLGVAIKQQINLELDYQI 488 G L+ I+ I+ +++++ L T Q V+ L +KQ+I E +I Sbjct: 576 GVSLMQTLIDDILTYAKVDTQYAQLT------FTDVQEVVDKALA-NLKQRIE-ESGAEI 627 Query: 489 NVGQ-DQFCADQERLDQILTQLLNNALKFTPAEGTVILRIW--KESNQAIFQVEDTGIGI 545 VG ADQ +L Q+ L+ N +KF + I +IW ++ + +F V+D GIGI Sbjct: 628 EVGSMPAVMADQIQLMQVFQNLIANGIKFAGDKSPKI-KIWGDRQEDAWVFAVQDNGIGI 686 Query: 546 NEQQLPVLFEAFKVAGDSYTSFYETGGVGLALTKQLVELHGGYIEVESSPGQGTIFTTVI 605 + Q +F F+ Y+ G+GLA+ K+++E H G I +ES+PG+G+ F I Sbjct: 687 DPQFFERIFVIFQRLHTR--DEYKGTGMGLAICKKIIEGHQGQIWLESNPGEGSTFYFSI 744 Query: 606 PQQN 609 P N Sbjct: 745 PIGN 748 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.319 0.135 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,606 Number of Sequences: 78 Number of extensions: 3121 Number of successful extensions: 94 Number of sequences better than 1.0e-05: 18 Number of HSP's better than 0.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 20 Number of HSP's gapped (non-prelim): 28 length of query: 750 length of database: 48,235 effective HSP length: 70 effective length of query: 680 effective length of database: 42,775 effective search space: 29087000 effective search space used: 29087000 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 96 (41.6 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-002788 slr1982 (123 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-002788 slr1982 241 5e-67 SYNE-PCC-01-002879 slr2104 97 1e-23 SYNE-PCC-01-000800 sll1228 92 8e-22 SYNE-PCC-01-002873 slr2098 89 4e-21 SYNE-PCC-01-001132 sll1672 88 1e-20 SYNE-PCC-01-001461 slr0115 86 3e-20 SYNE-PCC-01-001306 sll1905 81 1e-18 SYNE-PCC-01-002617 slr1759 79 4e-18 SYNE-PCC-01-002033 slr0947 75 1e-16 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 73 3e-16 SYNE-PCC-01-002672 slr1837 72 6e-16 SYNE-PCC-01-002086 slr1042 71 1e-15 SYNE-PCC-01-001133 sll1673 71 1e-15 SYNE-PCC-01-000414 sll0649 67 2e-14 SYNE-PCC-01-002731 slr1909 65 8e-14 SYNE-PCC-01-002618 slr1760 63 3e-13 SYNE-PCC-01-001160 sll1708 63 4e-13 SYNE-PCC-01-002486 slr1584 62 7e-13 SYNE-PCC-01-001437 slr0081 62 9e-13 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 61 1e-12 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 60 3e-12 SYNE-PCC-01-002489 slr1588 59 7e-12 SYNE-PCC-01-000242 sll0396 59 7e-12 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 52 5e-10 SYNE-PCC-01-002635 slr1783 52 7e-10 SYNE-PCC-01-000523 sll0797 51 1e-09 SYNE-PCC-01-002221 slr1213 50 2e-09 SYNE-PCC-01-001075 sll1592 50 3e-09 SYNE-PCC-01-000518 sll0789 47 2e-08 SYNE-PCC-01-000608 sll0921 46 5e-08 SYNE-PCC-01-001575 slr0312 43 4e-07 SYNE-PCC-01-001517 slr0222 43 4e-07 SYNE-PCC-01-000877 sll1330 42 9e-07 SYNE-PCC-01-002778 slr1969 41 1e-06 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 241 bits (616), Expect = 5e-67 Identities = 123/123 (100%), Positives = 123/123 (100%) Query: 1 MESMAKVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPI 60 MESMAKVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPI Sbjct: 1 MESMAKVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPI 60 Query: 61 IDGWTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEA 120 IDGWTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEA Sbjct: 61 IDGWTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEA 120 Query: 121 LIN 123 LIN Sbjct: 121 LIN 123 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 97.4 bits (241), Expect = 1e-23 Identities = 49/114 (42%), Positives = 78/114 (68%) Query: 5 AKVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGW 64 A +LLVEDNE+NR+ L KG V +A +G++A+T+ S + ILMD+ +P+++G+ Sbjct: 718 ASILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGY 777 Query: 65 TATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKM 118 AT+ I+ ++PIIA+TA+AMA D+E+A+ AG +D+ TKPI+ L Q + Sbjct: 778 DATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLFQTL 831 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 91.7 bits (226), Expect = 8e-22 Identities = 47/110 (42%), Positives = 70/110 (63%) Query: 6 KVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGWT 65 KVL+V+D +R +L + L G+ V A +GE A+ + S PQ+ILMDM +P++DG + Sbjct: 419 KVLVVDDRPESRLLLRQLLTSLGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRS 478 Query: 66 ATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLL 115 T++IK P G H IIALTA A +R ++AGCDD+ +KP + L+ Sbjct: 479 TTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELI 528 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 89.4 bits (220), Expect = 4e-21 Identities = 47/114 (41%), Positives = 74/114 (64%) Query: 5 AKVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGW 64 A++LLVEDNE+N+++ + L G+ V +A +G A+ + + L+LMDM +P +DG Sbjct: 925 ARILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGI 984 Query: 65 TATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKM 118 AT I+ +P A +PI+A+TA+ M DRER + AG +D+ KPIE + L K+ Sbjct: 985 EATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEELWNKL 1038 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 87.8 bits (216), Expect = 1e-20 Identities = 41/103 (39%), Positives = 66/103 (64%) Query: 6 KVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGWT 65 K+L+V+D +NR +L + L G+E+ A +G++A+ + S P LI MDM +P++DG+ Sbjct: 631 KILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYE 690 Query: 66 ATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKP 108 ATK IKG G ++ALTA + ++ ++AGCDD+ KP Sbjct: 691 ATKYIKGQVKGNATAVVALTASVLEEEKAIVLSAGCDDFLRKP 733 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 86.3 bits (212), Expect = 3e-20 Identities = 40/119 (33%), Positives = 73/119 (61%) Query: 4 MAKVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDG 63 M ++L+++D+ D++S L GY+V AVDG + +A+ P LI++D+ LP +DG Sbjct: 1 MPRILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDG 60 Query: 64 WTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEALI 122 +T ++++ A IP++ LTA D+ + +G DDY TKP +++ +L ++ AL+ Sbjct: 61 FTVCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEMLARVRALL 119 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 80.9 bits (198), Expect = 1e-18 Identities = 42/114 (36%), Positives = 72/114 (63%), Gaps = 1/114 (0%) Query: 7 VLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGWTA 66 +LL EDN +N+ + L + GY V + +G++A++ ++LMD+ +P +DG TA Sbjct: 742 ILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLTA 801 Query: 67 TKQIKGHPDGAHIP-IIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKME 119 T+ I+ + P IIA+TA++M DRER +A+G +DY +KPI ++ L Q ++ Sbjct: 802 TEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKPIRLEALQQALQ 855 Score = 66.2 bits (160), Expect = 3e-14 Identities = 37/113 (32%), Positives = 57/113 (50%) Query: 7 VLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGWTA 66 +L+V+D + N ++S L +GY G +A+ P LIL+D+ +P +DG Sbjct: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQPDLILLDLMMPGMDGLEV 79 Query: 67 TKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKME 119 ++K P IP+I LTA D +A A G DY TKP LL +++ Sbjct: 80 CDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPELLARVK 132 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 79.3 bits (194), Expect = 4e-18 Identities = 45/126 (35%), Positives = 75/126 (59%), Gaps = 4/126 (3%) Query: 1 MESMAKVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPI 60 ++ ++LL EDN +N+ + + L GY V IA +G++ + + L+LMDM +P+ Sbjct: 1186 LQPALQILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPV 1245 Query: 61 IDGWTATKQIKGH-PDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPI---EIKRLLQ 116 +DG TA + I+ P I+A+TA+AM DR+ + AG D Y +KPI +++++LQ Sbjct: 1246 MDGITACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQLRKVLQ 1305 Query: 117 KMEALI 122 ALI Sbjct: 1306 DTSALI 1311 Score = 41.2 bits (95), Expect = 1e-06 Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 3/94 (3%) Query: 6 KVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQL--ILMDMSLPIIDG 63 +VL+V+DNE NR +L + G GE A+ + P L ++D+ +P +DG Sbjct: 1035 QVLIVDDNETNRRILQDQCQAWGLVCHCFTSGESALDW-FARCPDLDAAILDLQMPNMDG 1093 Query: 64 WTATKQIKGHPDGAHIPIIALTAHAMASDRERAI 97 T ++ G +PII L++ +A E ++ Sbjct: 1094 ITLAHHLRQFAQGKDLPIILLSSGLVAGADELSV 1127 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 74.7 bits (182), Expect = 1e-16 Identities = 40/114 (35%), Positives = 63/114 (55%), Gaps = 3/114 (2%) Query: 9 LVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGWTATK 68 +V+D R +L RL GYEVV A DGE+A+ P L+++D+ +P +DG+ + Sbjct: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 Query: 69 QIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEALI 122 +++ D IPII LTA +DR + G DDY KP K L ++ +++ Sbjct: 61 ELRKESD---IPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVL 111 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 73.2 bits (178), Expect = 3e-16 Identities = 47/116 (40%), Positives = 67/116 (57%), Gaps = 1/116 (0%) Query: 6 KVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGWT 65 K+L+VED R+M++ L +K Y+V+ A D + A+ I E+P+LIL+D LP G Sbjct: 4 KILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINK-IKENPKLILLDWMLPGRSGIQ 62 Query: 66 ATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEAL 121 + IK A IPII LTA + D + AG DDY TKP + LL ++EA+ Sbjct: 63 FIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAV 118 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 72.0 bits (175), Expect = 6e-16 Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 6/121 (4%) Query: 4 MAKVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDG 63 MA +LLV+D + LS+ L +G+ + +A G+ + MAI+ L+++D LP + G Sbjct: 1 MANILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSG 60 Query: 64 WTATKQIK--GHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEAL 121 +QI+ GH P++ LTA DR + AG DDY KP E++ LL ++ AL Sbjct: 61 LEICRQIRILGH----STPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFELRELLARVRAL 116 Query: 122 I 122 + Sbjct: 117 L 117 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 71.2 bits (173), Expect = 1e-15 Identities = 38/119 (31%), Positives = 67/119 (56%) Query: 4 MAKVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDG 63 M VLLVED+ R+M+S L G++V IA DG +A+ + SP L+++D+ +P ++G Sbjct: 27 MNAVLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNG 86 Query: 64 WTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEALI 122 + ++IK P ++P+I ++ DR + G D Y KP + L+ ++ L+ Sbjct: 87 YEVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQLL 145 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 70.9 bits (172), Expect = 1e-15 Identities = 40/118 (33%), Positives = 63/118 (53%) Query: 2 ESMAKVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPII 61 E +LLV+D N +LS LI GY V G+ A+ + P LIL+D+ +P + Sbjct: 6 EKKGNILLVDDLPNNLQLLSDLLINLGYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDM 65 Query: 62 DGWTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKME 119 DG+ + IK + IPII ++A D+ +A G DY TKP +I+ ++ ++E Sbjct: 66 DGYQVCEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQIEEVVARIE 123 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 67.4 bits (163), Expect = 2e-14 Identities = 35/120 (29%), Positives = 63/120 (52%) Query: 3 SMAKVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIID 62 +M +L+VED++ ++ L R+ + ++ DGE + + + P LI++D+ LP +D Sbjct: 10 AMPNILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLD 69 Query: 63 GWTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEALI 122 G +I+ P I+ LTA DR ++ G DDY KP + L+ ++ AL+ Sbjct: 70 GLEVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRALL 129 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 65.1 bits (157), Expect = 8e-14 Identities = 32/116 (27%), Positives = 68/116 (58%) Query: 7 VLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGWTA 66 +LLV+D+ ++ L +GY+V A +G +A+ + + P +I+ D+ +P +DG+ Sbjct: 10 LLLVDDDPNLLLLVKDYLEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAF 69 Query: 67 TKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEALI 122 +Q++ +PD + IP++ L+A + +R + + G D Y KP E + L ++++ + Sbjct: 70 IEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEELAAQVQSCL 125 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 63.2 bits (152), Expect = 3e-13 Identities = 35/118 (29%), Positives = 65/118 (55%) Query: 5 AKVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGW 64 AK+L+V+D+ R L L ++G+ V +A +GE+A+T P+++L+D +P++DG+ Sbjct: 12 AKILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGF 71 Query: 65 TATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEALI 122 + + ++ +T + +RA AG DY TKPI L Q+++ L+ Sbjct: 72 ACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLL 129 >SYNE-PCC-01-001160 sll1708 Length = 226 Score = 62.8 bits (151), Expect = 4e-13 Identities = 42/117 (35%), Positives = 68/117 (58%), Gaps = 4/117 (3%) Query: 6 KVLLVEDNEMNRDMLSRRL-IRKGYEVVIAVD-GEQAVTMAISESPQLILMDMSLPIIDG 63 K+L+VED+ + + L + L + +E++ VD G AV A +P LI+MD+ LP +DG Sbjct: 18 KILIVEDDPLMQLGLEQALGAHERFEIIGRVDNGYGAVQQAAVLNPDLIVMDIGLPGLDG 77 Query: 64 WTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEA 120 ATKQIK I I+ LT+H + ++ A+++G D Y K ++RL+ + A Sbjct: 78 IEATKQIK--QTSPQIHIVVLTSHTLPNEIIAALSSGADAYCVKGATLERLILAIAA 132 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 62.0 bits (149), Expect = 7e-13 Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 2/117 (1%) Query: 6 KVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGWT 65 ++LLVED+ + L+ L + Y V IA D A A L+++D+ LP +DG T Sbjct: 2 RILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGIT 61 Query: 66 ATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEALI 122 ++ + H +PI+ +TA +D+ + AG DDY KP+++ L ++ AL+ Sbjct: 62 LCQKWRSH--SYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALL 116 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 61.6 bits (148), Expect = 9e-13 Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 9/124 (7%) Query: 6 KVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMA--ISESP-----QLILMDMSL 58 ++L+VED R+ + L +GYEV DG A+ + SE P LI++D+ L Sbjct: 32 RILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIML 91 Query: 59 PIIDGWTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKM 118 P ++G + ++ G + PI+ ++A ++ + G DDY TKP +K L+ + Sbjct: 92 PQVNGLDVCRSLRF--GGDNTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKELVARC 149 Query: 119 EALI 122 A+I Sbjct: 150 RAMI 153 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 60.8 bits (146), Expect = 1e-12 Identities = 36/119 (30%), Positives = 72/119 (60%), Gaps = 4/119 (3%) Query: 4 MAKVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDG 63 M+K+LLV+D+ ++LS L +G++V A +G +A+ ++ES +L+L+D+ +P ++G Sbjct: 1 MSKLLLVDDDIELTELLSTLLELEGFDVETANNGLEAL-QKLNESYKLVLLDVMMPKLNG 59 Query: 64 WTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEALI 122 K+I+ +++P++ LTA DR + G DD KP + L+ +++A++ Sbjct: 60 IETLKEIR---KVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAIL 115 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 59.7 bits (143), Expect = 3e-12 Identities = 33/118 (27%), Positives = 63/118 (53%), Gaps = 4/118 (3%) Query: 6 KVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGWT 65 ++LL+ED+ + + L L + G+ V DG+ + S +++D++LP +DG Sbjct: 2 RILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLE 61 Query: 66 ATKQIKG-HPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEALI 122 +Q + H D +P++ LTA +R + + +G DDY KP + + +++ALI Sbjct: 62 VLQQWRSNHQD---VPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALI 116 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 58.5 bits (140), Expect = 7e-12 Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 2/119 (1%) Query: 4 MAKVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTM--AISESPQLILMDMSLPII 61 M+ +L+VED + R+++ L + Y+++ A +G A+ + ++ P LI+ D+ +P + Sbjct: 1 MSTILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEM 60 Query: 62 DGWTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEA 120 DG ++ + A IP I LTA D + + +G DDY KP + + LL + + Sbjct: 61 DGHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAVNS 119 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 58.5 bits (140), Expect = 7e-12 Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 2/103 (1%) Query: 6 KVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGWT 65 +VL+VE+ E + L +GY+V +A DG + T A P LI+++ +LP + G Sbjct: 4 RVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLE 63 Query: 66 ATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKP 108 ++++ G+ IPII +TA +R + AG DDY KP Sbjct: 64 LCRRLR--EMGSRIPIILITAKDDVEERVMGLDAGADDYIVKP 104 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 52.4 bits (124), Expect = 5e-10 Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 3/118 (2%) Query: 6 KVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGWT 65 K+L+VED + R+ L +GY+V A +G + + + + L++MD++LP +G Sbjct: 5 KILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGLL 64 Query: 66 ATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEALIN 123 ++++ + +P+I LT D+ + G DDY TKP + L + L++ Sbjct: 65 LARELR---EELSLPLIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLH 119 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 52.0 bits (123), Expect = 7e-10 Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 8/128 (6%) Query: 1 MESMAKVLLVEDNEMNRDMLSRRLIRKG-YEVVIAVDGEQAVTMAISESPQLILMDMSLP 59 M +LLV+D R+ + L G ++V +A + +A P L++ D+ +P Sbjct: 52 MAEPISLLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMP 111 Query: 60 IIDGWTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIE-------IK 112 +DG+ ++++ +P++ LTA M DR + GCD + +KP + ++ Sbjct: 112 QVDGYQFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVR 171 Query: 113 RLLQKMEA 120 LL + +A Sbjct: 172 NLLARQQA 179 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 51.2 bits (121), Expect = 1e-09 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 4/118 (3%) Query: 6 KVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQ--LILMDMSLPIIDG 63 ++LLVED + + L+ + Y V DG QA ++ + L ++D LP + G Sbjct: 2 RILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSG 61 Query: 64 WTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEAL 121 ++++ G +P++ LTA +R + AG DDY TKP + LL ++ AL Sbjct: 62 LELCQKLR--TQGNSLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAELLARLRAL 117 >SYNE-PCC-01-002221 slr1213 Length = 241 Score = 50.4 bits (119), Expect = 2e-09 Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 5/121 (4%) Query: 4 MAKVLLVEDNEMNRDMLSRRLIRKGYEV-VIAVDGEQAVTMAISESPQLILMDMSLP-II 61 + K+L+VED + +++ L GYE+ VIA DG A+ P L+L+D+ + I Sbjct: 2 VTKILIVEDERLVAQHIAQLLKSDGYEICVIASDGATALKKIAEFYPDLVLLDIRIKGEI 61 Query: 62 DGWTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEAL 121 DG ++IK IPI+ LTA + ERA Y KP ++LL + Sbjct: 62 DGIEVAERIKSLYS---IPIVYLTAFSDGETLERAQKTNPQGYVIKPFRREQLLSTVAIA 118 Query: 122 I 122 I Sbjct: 119 I 119 >SYNE-PCC-01-001075 sll1592 Length = 226 Score = 50.1 bits (118), Expect = 3e-09 Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 6/113 (5%) Query: 6 KVLLVEDNEMNRDMLSRRLIRK-GYEVV-IAVDGEQAVTMAISESPQLILMDMSLPIIDG 63 ++LLVED+E+ R L RL ++ G +V A DGE A+ + ++++D+ LP I G Sbjct: 9 RILLVEDDELFRLGLVTRLSQEPGLDVAGEAEDGETAIAYVNQQLFDVVILDVGLPGIGG 68 Query: 64 WTATKQIKG-HPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLL 115 A QIK HP +P++ LT+H+ + R I A Y K + + L+ Sbjct: 69 IEACHQIKKIHP---QLPVLILTSHSQPALINRLIEAQAQGYCVKGVAAETLV 118 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 47.4 bits (111), Expect = 2e-08 Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 4/118 (3%) Query: 6 KVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISE--SPQLILMDMSLPIIDG 63 ++LLVED L + L R+ Y V DG A + + L + D +P + G Sbjct: 2 RLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSG 61 Query: 64 WTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEAL 121 ++++G +PI+ LTA +DR + AG DDY KP + LL ++ +L Sbjct: 62 LELCQKLRGQRSS--LPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAELLARLRSL 117 >SYNE-PCC-01-000608 sll0921 Length = 222 Score = 45.8 bits (107), Expect = 5e-08 Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 2/117 (1%) Query: 6 KVLLVEDNEMNRDMLSRRL-IRKGYEVV-IAVDGEQAVTMAISESPQLILMDMSLPIIDG 63 ++ L+ED ++ R L L + +E V A +G + M P ++++D+ LP ++G Sbjct: 5 RIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNG 64 Query: 64 WTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEA 120 T+Q+K P ++ LT + A +AG D Y K + L++ ++A Sbjct: 65 IDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQA 121 >SYNE-PCC-01-001575 slr0312 Length = 209 Score = 42.7 bits (99), Expect = 4e-07 Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 4/118 (3%) Query: 6 KVLLVEDNEMNRDMLSRRLIRKGYEVVIAV--DGEQAVTMAISESPQLILMDMSLPIIDG 63 +VL+ +D+ + R L+ + R VIA +GEQA+ + P + LMD+ +P ++G Sbjct: 8 RVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPEVEG 67 Query: 64 WTATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEAL 121 A I A II LT + D R + AG Y K E LL + + Sbjct: 68 VAAISAICAIVKFAR--IIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTV 123 >SYNE-PCC-01-001517 slr0222 Length = 1178 Score = 42.7 bits (99), Expect = 4e-07 Identities = 25/79 (31%), Positives = 39/79 (49%) Query: 6 KVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGWT 65 KVLLV+D N LSR L E++ A G++A+ A + L+++ + +DG Sbjct: 8 KVLLVDDQRENLVALSRALDSLPVEIITANSGQEAIATAATTEFALMILAQEMSELDGLN 67 Query: 66 ATKQIKGHPDGAHIPIIAL 84 K ++ P PII L Sbjct: 68 TAKILRSFPLAEQTPIIFL 86 >SYNE-PCC-01-000877 sll1330 Length = 250 Score = 41.6 bits (96), Expect = 9e-07 Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 3/116 (2%) Query: 7 VLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGWTA 66 + +VE N R +LS L + GY V QA ++ P L ++D L DG Sbjct: 6 ISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAFNNQLPTLAVIDSDLTDGDGIEL 65 Query: 67 TKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEALI 122 + + I L+A D + AG DDY TKP ++ L ++E LI Sbjct: 66 CRWLYQQHQSM---IFILSAKDTEKDIVHGLKAGADDYLTKPFGMQEFLARIECLI 118 >SYNE-PCC-01-002778 slr1969 Length = 750 Score = 41.2 bits (95), Expect = 1e-06 Identities = 26/117 (22%), Positives = 57/117 (48%), Gaps = 2/117 (1%) Query: 5 AKVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGW 64 + V+++E +E ++ L Y+V+ +D A+ P LI++D +D Sbjct: 630 SSVIVIEQDEEIATLICELLTVANYQVIWLIDTTNALQQVELLQPGLIIVDGDF--VDVT 687 Query: 65 TATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKMEAL 121 T+ IK + + + L+ +++ + G DDY KP++ + LLQ+++++ Sbjct: 688 EVTRGIKKSRRISKVTVFLLSESLSSAEWQALSQKGIDDYLLKPLQPELLLQRVQSI 744 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.319 0.134 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,626 Number of Sequences: 78 Number of extensions: 400 Number of successful extensions: 60 Number of sequences better than 1.0e-05: 34 Number of HSP's better than 0.0 without gapping: 21 Number of HSP's successfully gapped in prelim test: 13 Number of HSP's that attempted gapping in prelim test: 15 Number of HSP's gapped (non-prelim): 37 length of query: 123 length of database: 48,235 effective HSP length: 54 effective length of query: 69 effective length of database: 44,023 effective search space: 3037587 effective search space used: 3037587 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 88 (38.5 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-002873 slr2098 (1261 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-002873 slr2098 2350 0.0 SYNE-PCC-01-002617 slr1759 351 9e-99 SYNE-PCC-01-001306 sll1905 298 5e-83 SYNE-PCC-01-002879 slr2104 296 2e-82 SYNE-PCC-01-001132 sll1672 235 7e-64 SYNE-PCC-01-000800 sll1228 200 3e-53 SYNE-PCC-01-000891 sll1353 187 1e-49 SYNE-PCC-01-000295 sll0474 169 6e-44 SYNE-PCC-01-001280 sll1871 164 1e-42 SYNE-PCC-01-001294 sll1888 145 8e-37 SYNE-PCC-01-002778 slr1969 138 9e-35 SYNE-PCC-01-001517 slr0222 137 2e-34 SYNE-PCC-01-001509 slr0210 130 3e-32 SYNE-PCC-01-000985 sll1475 93 6e-21 SYNE-PCC-01-002788 slr1982 89 6e-20 SYNE-PCC-01-001690 slr0473 85 2e-18 SYNE-PCC-01-002635 slr1783 77 3e-16 SYNE-PCC-01-002086 slr1042 74 2e-15 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 70 3e-14 SYNE-PCC-01-002731 slr1909 68 2e-13 SYNE-PCC-01-002486 slr1584 67 3e-13 SYNE-PCC-01-002489 slr1588 66 8e-13 SYNE-PCC-01-000523 sll0797 64 3e-12 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 63 5e-12 SYNE-PCC-01-000414 sll0649 62 8e-12 SYNE-PCC-01-001133 sll1673 62 1e-11 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 58 2e-10 SYNE-PCC-01-001461 slr0115 55 1e-09 SYNE-PCC-01-002618 slr1760 55 1e-09 SYNE-PCC-01-001575 slr0312 55 1e-09 SYNE-PCC-01-002672 slr1837 54 2e-09 SYNE-PCC-01-001437 slr0081 54 4e-09 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 53 5e-09 SYNE-PCC-01-002033 slr0947 53 7e-09 SYNE-PCC-01-000518 sll0789 50 4e-08 SYNE-PCC-01-000242 sll0396 47 3e-07 SYNE-PCC-01-000608 sll0921 47 5e-07 SYNE-PCC-01-000877 sll1330 42 9e-06 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 2350 bits (6090), Expect = 0.0 Identities = 1204/1261 (95%), Positives = 1204/1261 (95%) Query: 1 MFWQPVSPLNADQLNYQGSYDPKLVLLSVAIAIFTAYMAFLMASSALSLPGRWSRKIALA 60 MFWQPVSPLNADQLNYQGSYDPKLVLLSVAIAIFTAYMAFLMASSALSLPGRWSRKIALA Sbjct: 1 MFWQPVSPLNADQLNYQGSYDPKLVLLSVAIAIFTAYMAFLMASSALSLPGRWSRKIALA 60 Query: 61 LSGTVMGLGIWAMHFIGMLGFELPCPISYDPLITFISVIPAIAASIYALNFLSFQAPTAK 120 LSGTVMGLGIWAMHFIGMLGFELPCPISYDPLITFISVIPAIAASIYALNFLSFQAPTAK Sbjct: 61 LSGTVMGLGIWAMHFIGMLGFELPCPISYDPLITFISVIPAIAASIYALNFLSFQAPTAK 120 Query: 121 NLMVGAIWFGLGIGTMHYSGMAALELHGNIYYELPLFVLSLVIAVMLAFVALLFRFHSAK 180 NLMVGAIWFGLGIGTMHYSGMAALELHGNIYYELPLFVLSLVIAVMLAFVALLFRFHSAK Sbjct: 121 NLMVGAIWFGLGIGTMHYSGMAALELHGNIYYELPLFVLSLVIAVMLAFVALLFRFHSAK 180 Query: 181 IFHTTHGPALGSSALVMGLSTSGMHYTAMTATHFICRPWGEFFIQGIDIQEVAIAVTISI 240 IFHTTHGPALGSSALVMGLSTSGMHYTAMTATHFICRPWGEFFIQGIDIQEVAIAVTISI Sbjct: 181 IFHTTHGPALGSSALVMGLSTSGMHYTAMTATHFICRPWGEFFIQGIDIQEVAIAVTISI 240 Query: 241 TLLTGGVMLFVLREISIQNQQQKILVATESWYRQIIEYAPEGIMVLDAQGNIILANTSIE 300 TLLTGGVMLFVLREISIQNQQQKILVATESWYRQIIEYAPEGIMVLDAQGNIILANTSIE Sbjct: 241 TLLTGGVMLFVLREISIQNQQQKILVATESWYRQIIEYAPEGIMVLDAQGNIILANTSIE 300 Query: 301 KLFGYSQTELIGXXXXXXXXXXXXXXXXXXXXXXEDVGPTCPLDQEEFEILGTRYDGSEF 360 KLFGYSQTELIG EDVGPTCPLDQEEFEILGTRYDGSEF Sbjct: 301 KLFGYSQTELIGQSIALLGLAELLQQSLHLLQEGEDVGPTCPLDQEEFEILGTRYDGSEF 360 Query: 361 PIEVSLTSLPSLSQREMNIFASVRDISARQEAQQQILRQREHLQSVLDSAPVGVAITVNG 420 PIEVSLTSLPSLSQREMNIFASVRDISARQEAQQQILRQREHLQSVLDSAPVGVAITVNG Sbjct: 361 PIEVSLTSLPSLSQREMNIFASVRDISARQEAQQQILRQREHLQSVLDSAPVGVAITVNG 420 Query: 421 ITQFANPHIGELVDLKVGDSPQKIYVDLGDRQQMLEELTQFGRSQSRVYKMYNPRGEIRD 480 ITQFANPHIGELVDLKVGDSPQKIYVDLGDRQQMLEELTQFGRSQSRVYKMYNPRGEIRD Sbjct: 421 ITQFANPHIGELVDLKVGDSPQKIYVDLGDRQQMLEELTQFGRSQSRVYKMYNPRGEIRD 480 Query: 481 ILATFLATDYEGQKGILGWLADITPIXXXXXXXXXXXXXXXXXSRIKADFLANMSHEIRT 540 ILATFLATDYEGQKGILGWLADITPI SRIKADFLANMSHEIRT Sbjct: 481 ILATFLATDYEGQKGILGWLADITPIKAAEAEMKRAKELAEEASRIKADFLANMSHEIRT 540 Query: 541 PMNAVIGMTHLALKTDLTPRQREYLHKIRFSGQHLLGVINDILDFSKIEAGKLPMESIDF 600 PMNAVIGMTHLALKTDLTPRQREYLHKIRFSGQHLLGVINDILDFSKIEAGKLPMESIDF Sbjct: 541 PMNAVIGMTHLALKTDLTPRQREYLHKIRFSGQHLLGVINDILDFSKIEAGKLPMESIDF 600 Query: 601 DLDKVLDNVATLISEKATNKGLELLFDIDRNLPRHFIGDPLRLGQILINYANNAVKFTEQ 660 DLDKVLDNVATLISEKATNKGLELLFDIDRNLPRHFIGDPLRLGQILINYANNAVKFTEQ Sbjct: 601 DLDKVLDNVATLISEKATNKGLELLFDIDRNLPRHFIGDPLRLGQILINYANNAVKFTEQ 660 Query: 661 GDITIVVRLQEYRDQDVVLYLAVKDTGIGIKPEHIANLFNSFQQADSSTTRNFGGTGLGL 720 GDITIVVRLQEYRDQDVVLYLAVKDTGIGIKPEHIANLFNSFQQADSSTTRNFGGTGLGL Sbjct: 661 GDITIVVRLQEYRDQDVVLYLAVKDTGIGIKPEHIANLFNSFQQADSSTTRNFGGTGLGL 720 Query: 721 AICKRIAELMGGEVGVESEYGQGSTFWAKVCLQKSNVIPHRLVLSKDLEGKRVLVVDDND 780 AICKRIAELMGGEVGVESEYGQGSTFWAKVCLQKSNVIPHRLVLSKDLEGKRVLVVDDND Sbjct: 721 AICKRIAELMGGEVGVESEYGQGSTFWAKVCLQKSNVIPHRLVLSKDLEGKRVLVVDDND 780 Query: 781 HARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPNMDGLEVARR 840 HARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPNMDGLEVARR Sbjct: 781 HARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPNMDGLEVARR 840 Query: 841 LKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISPSVLFDSLARVLGDPTALA 900 LKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISPSVLFDSLARVLGDPTALA Sbjct: 841 LKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISPSVLFDSLARVLGDPTALA 900 Query: 901 QEMRQSSGIGAEDLALEKLRRIRGARILLVEDNEINQEVAAELLRDVGFNVDVAANGLIA 960 QEMRQSSGIGAEDLALEKLRRIRGARILLVEDNEINQEVAAELLRDVGFNVDVAANGLIA Sbjct: 901 QEMRQSSGIGAEDLALEKLRRIRGARILLVEDNEINQEVAAELLRDVGFNVDVAANGLIA 960 Query: 961 LERLNNNAYALVLMDMQMPEMDGIEATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAG 1020 LERLNNNAYALVLMDMQMPEMDGIEATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAG Sbjct: 961 LERLNNNAYALVLMDMQMPEMDGIEATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAG 1020 Query: 1021 MNDHLGKPIEPEELWNKLLHWIPVDSPLAPETIEESAINTSDPEISIPHIPGLNSDDGLR 1080 MNDHLGKPIEPEELWNKLLHWIPVDSPLAPETIEESAINTSDPEISIPHIPGLNSDDGLR Sbjct: 1021 MNDHLGKPIEPEELWNKLLHWIPVDSPLAPETIEESAINTSDPEISIPHIPGLNSDDGLR 1080 Query: 1081 RVLGKKSLYLKMLHKFVASQSSFLPEITQALGEKDYGFAERLAHTLKGVAGNIGXXXXXX 1140 RVLGKKSLYLKMLHKFVASQSSFLPEITQALGEKDYGFAERLAHTLKGVAGNIG Sbjct: 1081 RVLGKKSLYLKMLHKFVASQSSFLPEITQALGEKDYGFAERLAHTLKGVAGNIGAQELQQ 1140 Query: 1141 XXXXXXXXXXXXWPQPEVENLLTNLGDRLDNLIAQLTSNLPPEPATVAITLDQGQLEEIC 1200 WPQPEVENLLTNLGDRLDNLIAQLTSNLPPEPATVAITLDQGQLEEIC Sbjct: 1141 EAAELEKAIKEQWPQPEVENLLTNLGDRLDNLIAQLTSNLPPEPATVAITLDQGQLEEIC 1200 Query: 1201 DHLAQLLGEDDAEAADLLQNHGDLLRQAFPDHYSAIAAGINNFDFEAALAALTTARQFSQ 1260 DHLAQLLGEDDAEAADLLQNHGDLLRQAFPDHYSAIAAGINNFDFEAALAALTTARQFSQ Sbjct: 1201 DHLAQLLGEDDAEAADLLQNHGDLLRQAFPDHYSAIAAGINNFDFEAALAALTTARQFSQ 1260 Query: 1261 P 1261 P Sbjct: 1261 P 1261 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 351 bits (900), Expect = 9e-99 Identities = 244/656 (37%), Positives = 344/656 (52%), Gaps = 64/656 (9%) Query: 524 SRIKADFLANMSHEIRTPMNAVIGMTHLALKTDLTPRQREYLHKIRFSGQHLLGVINDIL 583 +R K +FLA MSHEIRTPMN VIGMT L + TDL +Q +Y+ IR SG+ LL +INDIL Sbjct: 775 NRAKGEFLAMMSHEIRTPMNGVIGMTELLIMTDLNLQQLDYVQTIRQSGETLLTIINDIL 834 Query: 584 DFSKIEAGKLPMESIDFDLDKVLDNVATLISEKATNKGLELLFDIDRNLPRHFIGDPLRL 643 DFSKIEA KL +E+ F+L +++ V + A K LEL + ID P +GD +RL Sbjct: 835 DFSKIEADKLVLETQAFELRPLIETVLEMFGPIARAKHLELTYGIDPQTPARILGDQVRL 894 Query: 644 GQILINYANNAVKFTEQGDITIVVRLQEY---RDQDVVLYLA---------VKDTGIGIK 691 QIL N NA+KFTE+G++ + V+ + + +L L ++DTGIGI Sbjct: 895 RQILSNLIGNALKFTEKGEVVLTVKGEPFDPAESYHTILNLPHPSHRICFNLRDTGIGIP 954 Query: 692 PEHIANLFNSFQQADSSTTRNFGGTGLGLAICKRIAELMGGEVGVESEYGQGSTFWAKVC 751 + LF SF Q DSSTTR +GGTGLGL I +R+ ++MGG + V SE G GS F + C Sbjct: 955 LDRQDRLFKSFSQVDSSTTRKYGGTGLGLVISQRLTQMMGGVLTVTSEPGVGSNF--RFC 1012 Query: 752 LQKSNVIPHRLVLS--KDLEGKRVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNF 809 + + P + ++GK+VL+VDDN+ R +++D + V SG AL++ Sbjct: 1013 ILTTAQAPALAEADSVQQMKGKQVLIVDDNETNRRILQDQCQAWGLVCHCFTSGESALDW 1072 Query: 810 LAEADRENHPHSIVFIDWQMPNMDGLEVARRLKAMGLNHQPSIFIVTA---YGREELFVK 866 A +D QMPNMDG+ +A L+ I ++++ G +EL V Sbjct: 1073 FARCP----DLDAAILDLQMPNMDGITLAHHLRQFAQGKDLPIILLSSGLVAGADELSV- 1127 Query: 867 AKSLGIDDVLVKPISPSVLFDSLARVLGDPTALAQEMRQ------------SSGIGAEDL 914 VL KP+ S++FDSL + LA Q G+ ED Sbjct: 1128 -----FQTVLNKPVRQSLIFDSLVNIFQGSIGLADYAPQFDQLDLPEFVPDGDGLPTEDN 1182 Query: 915 ALEKLRRIRGARILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLM 974 A + +ILL EDN +NQ+VA ++L ++G+ V +A NG ++ L Y LVLM Sbjct: 1183 ATSLQPAL---QILLAEDNLVNQKVAHQMLNNLGYPVAIANNGQEVIDALEKKFYDLVLM 1239 Query: 975 DMQMPEMDGIEATIAIRQN-PRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEE 1033 DMQMP MDGI A IRQ P Q IVAMTAN M GDR+ CL AGM+ ++ KPI + Sbjct: 1240 DMQMPVMDGITACRHIRQTLPLERQPRIVAMTANAMPGDRQECLDAGMDGYISKPISINQ 1299 Query: 1034 LWNKLLHWIP--VDSPLAPETI-----------EESAINTSDPEIS--IPHIPGLNSDDG 1078 L K+L + SP A E I E++ + +D S P DD Sbjct: 1300 L-RKVLQDTSALITSPQAREDIVTLGDKITVVEEQTMVKPTDVTESPLDPTAIAFLRDD- 1357 Query: 1079 LRRVLGKKSLYLKMLHKFVASQSSFLPEITQALGEKDYGFAERLAHTLKGVAGNIG 1134 G +L+ +M+ + + E+ Q L D+ R AH+LK + ++G Sbjct: 1358 --LCGGDLTLFGEMVACYCQESQKLIEELVQGLEVDDFAVIRRTAHSLKSSSASLG 1411 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 298 bits (764), Expect = 5e-83 Identities = 229/670 (34%), Positives = 325/670 (48%), Gaps = 81/670 (12%) Query: 524 SRIKADFLANMSHEIRTPMNAVIGMTHLALKTDLTPRQREYLHKIRFSGQHLLGVINDIL 583 +R K++FLA MSHEIRTPMNA+IGMT L L TDLT +Q+ + IR SG+ LL +INDIL Sbjct: 318 NRSKSEFLATMSHEIRTPMNAIIGMTGLLLDTDLTTQQKYFAQTIRNSGETLLTLINDIL 377 Query: 584 DFSKIEAGKLPMESIDFDLDKVLDNVATLISEKATNKGLELLFDIDRNLPRHFIGDPLRL 643 DFSKIEAGKL +E FDL + L+ ++ A K L L+ +P + GD RL Sbjct: 378 DFSKIEAGKLDLEVYPFDLGQCLEEALDVVVPSARQKSLTLIRRFLTPIPPNLQGDVTRL 437 Query: 644 GQILINYANNAVKFTEQGDITIVVRLQEY--RDQDVVLYLAVKDTGIGIKPEHIANLFNS 701 QIL+N +NAVKFTE G + + V + ++ + + AV+DTGIGI P LF + Sbjct: 438 RQILVNLLSNAVKFTEAGQVKVTVEVVDHDAAKGEYQICFAVQDTGIGIAPNQQQALFQA 497 Query: 702 FQQADSSTTRNFGGTGLGLAICKRIAELMGGEVGVES------------EYGQ----GST 745 F Q +SS TR FGGTGLGLAIC R+ LMGG + ES + GQ GST Sbjct: 498 FSQGNSSITRRFGGTGLGLAICVRLTALMGGTIWAESNGCVVGNPPELWQIGQPTIEGST 557 Query: 746 FWAKV-------CLQKSNVIPHRLVLSKDLEGKRVLVVDDNDHARLVMKDLLEQMKFVVE 798 F+ V C + + H L + G+ VLV D ++ M++LL + E Sbjct: 558 FYFTVNLTVLPSCAYSVHNLRHSLFI-----GRSVLVADYDEGRGTRMRNLLASWRLQAE 612 Query: 799 TVE-SGPEALNFLAEADRENHPHSIVFIDWQMPNMDGLEVA----RRLKAMGLNHQ--PS 851 + S P L ++ + + + P G + ++ Q P Sbjct: 613 QITFSSPAKLGEDLKSRLTQKNYGALILHCPYPEGRGKQFTDFDLGKITTWAPTEQDIPV 672 Query: 852 IFIVTAYGREELFVKAKSLGIDDVLVKPISPSVLFDSLARVLGD---PTALAQEMRQSSG 908 + Y + + PI+P L ++L VLG PT ++ E Sbjct: 673 LVATDIYLSPGERYSGDKPPVQAWIKSPINPDELENTLVDVLGQTEPPTLVSTEAISGPL 732 Query: 909 IGAEDLALEKLRRIRGARILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNA 968 L ILL EDN INQ+VA LL+ +G+ VDV NG AL L Sbjct: 733 FPYSSSNL---------TILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGD 783 Query: 969 YALVLMDMQMPEMDGIEATIAIRQNPRYAQLP-IVAMTANVMQGDRERCLQAGMNDHLGK 1027 Y +VLMD++MPEMDG+ AT IR++ ++ P I+A+TA M+GDRERCL +GMND++ K Sbjct: 784 YDVVLMDVEMPEMDGLTATEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSK 843 Query: 1028 PIEPEELWNKL-----------------------LHWIPVDSPLAPETIEESAINTSDPE 1064 PI E L L P S PE + + D + Sbjct: 844 PIRLEALQQALQVAATALQSTSQDRMATVSCVSAFEAKPSPSSPCPEDPAGTTLPPIDQD 903 Query: 1065 ISIPHIPGLNSDDGLRRVLGKKSLYLKMLHKFVASQSSFLPEITQALGEKDYGFAERLAH 1124 I I + L+ ++G + + +++ + + L I A+ +D+G AH Sbjct: 904 I-ICSLRDLDRENG-------QLILREIIDIYCQTAPELLQRIKLAIANQDWGNLSSAAH 955 Query: 1125 TLKGVAGNIG 1134 TL + N+G Sbjct: 956 TLGSSSANLG 965 Score = 69.3 bits (168), Expect = 7e-14 Identities = 36/108 (33%), Positives = 62/108 (57%) Query: 927 ILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIEA 986 IL+V+D + N V +ELL G++ +G AL+R+ L+L+D+ MP MDG+E Sbjct: 20 ILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQPDLILLDLMMPGMDGLEV 79 Query: 987 TIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEEL 1034 ++Q+P+ +P++ +TA+ + D + G D++ KP P EL Sbjct: 80 CDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFSPPEL 127 Score = 65.9 bits (159), Expect = 8e-13 Identities = 46/134 (34%), Positives = 67/134 (50%), Gaps = 8/134 (5%) Query: 759 PHRLVLSKDLEGKRVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENH 818 PH + + + E +LVVDD V+ +LLE + V SGPEAL + +A + Sbjct: 6 PHPPIATFEPESFLILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQPD-- 63 Query: 819 PHSIVFIDWQMPNMDGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVK 878 ++ +D MP MDGLEV RLK + +TA ++ ++A + G D + K Sbjct: 64 ---LILLDLMMPGMDGLEVCDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTK 120 Query: 879 PISPSVLFDSLARV 892 P SP L LARV Sbjct: 121 PFSPPEL---LARV 131 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 296 bits (759), Expect = 2e-82 Identities = 168/405 (41%), Positives = 246/405 (60%), Gaps = 22/405 (5%) Query: 524 SRIKADFLANMSHEIRTPMNAVIGMTHLALKTDLTPRQREYLHKIRFSGQHLLGVINDIL 583 ++ K++FLANMSHEIRTPMNA+IGM+ L L+TDLT +QR YL K++++G+ LLG+IN+IL Sbjct: 455 TKAKSEFLANMSHEIRTPMNAIIGMSELVLQTDLTSQQRNYLQKVQYAGELLLGIINNIL 514 Query: 584 DFSKIEAGKLPMESIDFDLDKVLDNVATLISEKATNKGLELLFDIDRNLPRHFIGDPLRL 643 DFSK+EAGKL +E F +++V+ N+ +++ +A KGL L F +D +P +GD LRL Sbjct: 515 DFSKMEAGKLELEQKPFSVEEVMGNLHSILGIQAEAKGLTLNFHLDPRIPPILVGDRLRL 574 Query: 644 GQILINYANNAVKFTEQGDITIVVRLQEYRDQDVVLYLAVKDTGIGIKPEHIANLFNSFQ 703 QILIN NNAVKFT QG+ITI +L + ++ L +V DTGIG+ P+ + LF F Sbjct: 575 SQILINLGNNAVKFTNQGEITIRGQLLKTENEQTKLQFSVTDTGIGLTPDQQSKLFQWFN 634 Query: 704 QADSSTTRNFGGTGLGLAICKRIAELMGGEVGVESEYGQGSTFWAKVCL-QKSNVIPHRL 762 Q ++ST+R +GGTGLGLAI K + ELMGG++ +ES GQGSTF VCL S + Sbjct: 635 QGETSTSRQYGGTGLGLAISKSLTELMGGDIWLESVVGQGSTFHFTVCLGTASPAVAQDY 694 Query: 763 VLSK---------------DLEGKRVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEAL 807 ++S+ LEG +L+V+DN+ R DLL V+ +G EAL Sbjct: 695 LVSRVSILEAKPSVTQAITQLEGASILLVEDNEINREFAHDLLTSKGLRVQVANNGQEAL 754 Query: 808 NFLAEADRENHPHSIVFIDWQMPNMDGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKA 867 L ++ + + +D QMP ++G + R ++ + I +TA KA Sbjct: 755 TLLT-----SNTYDAILMDIQMPMLNGYDATRAIRQQEYHRNLPIIAMTANAMAGDQEKA 809 Query: 868 KSLGIDDVLVKPISPSVLFDSLARVLGDPTALAQEMRQSSGIGAE 912 G++D L KPI P +LF +LA + P + ++ SS + A+ Sbjct: 810 LDAGMNDHLTKPIKPDLLFQTLAHWI-PPNSAREKKNPSSNLKAD 853 Score = 162 bits (411), Expect = 5e-42 Identities = 101/239 (42%), Positives = 140/239 (58%), Gaps = 7/239 (2%) Query: 898 ALAQEMRQS--SGIGAEDLALEKLRRIRGARILLVEDNEINQEVAAELLRDVGFNVDVAA 955 A+AQ+ S S + A+ + + ++ GA ILLVEDNEIN+E A +LL G V VA Sbjct: 689 AVAQDYLVSRVSILEAKPSVTQAITQLEGASILLVEDNEINREFAHDLLTSKGLRVQVAN 748 Query: 956 NGLIALERLNNNAYALVLMDMQMPEMDGIEATIAIRQNPRYAQLPIVAMTANVMQGDRER 1015 NG AL L +N Y +LMD+QMP ++G +AT AIRQ + LPI+AMTAN M GD+E+ Sbjct: 749 NGQEALTLLTSNTYDAILMDIQMPMLNGYDATRAIRQQEYHRNLPIIAMTANAMAGDQEK 808 Query: 1016 CLQAGMNDHLGKPIEPEELWNKLLHWIPVDSPLAPETIEESAINTSDPEISIPHIPGLNS 1075 L AGMNDHL KPI+P+ L+ L HWIP +S A E S+ +D +S + G+N Sbjct: 809 ALDAGMNDHLTKPIKPDLLFQTLAHWIPPNS--AREKKNPSSNLKAD--LSFSSMTGINQ 864 Query: 1076 DDGLRRVLGKKSLYLKMLHKFVASQSSFLPEITQALGEKDYGFAERLAHTLKGVAGNIG 1134 G+ + + LY ++L KF S+F + D A R AH++KG A +G Sbjct: 865 QIGM-QYIENVELYHRLLVKFGDRYSNFADQFRTEQASDDPTAATRYAHSIKGAAALLG 922 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 235 bits (599), Expect = 7e-64 Identities = 148/416 (35%), Positives = 226/416 (54%), Gaps = 30/416 (7%) Query: 524 SRIKADFLANMSHEIRTPMNAVIGMTHLALKTDLTP-RQREYLHKIRFSGQHLLGVINDI 582 ++ K+ F+ANMSHE+R+P+NA+IG + L L+T P Q E I+ SG++LL +IN+I Sbjct: 362 AKAKSTFVANMSHELRSPLNAIIGFSQLMLRTKNLPMEQYENAGIIQRSGEYLLNLINNI 421 Query: 583 LDFSKIEAGKLPMESIDFDLDKVLDNVATLISEKATNKGLELLFDIDRNLPRHFIGDPLR 642 LDFSKIEAGK + +FDL +LD++ ++ KA N+G+EL+F D +LPR+ GD ++ Sbjct: 422 LDFSKIEAGKTHLNRHNFDLYLLLDDLEDMLHLKAANEGIELIFIRDHDLPRYVYGDEIK 481 Query: 643 LGQILINYANNAVKFTEQGDITIVVRLQEYRDQDVV-------------LYLAVKDTGIG 689 L QIL+N +NA+KFT +G++ + + Q+V+ L +KDTG G Sbjct: 482 LRQILLNLLSNAIKFTTEGEVVLTSNFRNAEQQEVINPETSTEPKNKYWLDFTIKDTGKG 541 Query: 690 IKPEHIANLFNSFQQADSSTTRNFGGTGLGLAICKRIAELMGGEVGVESEYGQGSTFWAK 749 I +++LF +F Q +S GTGLGLAI ++ +LMGG++ V S QG+TF Sbjct: 542 ISEVELSHLFEAFSQTESGRNAQ-EGTGLGLAITRQFIKLMGGDINVSSVVDQGTTFSFS 600 Query: 750 VCLQKSNVIPHR--------LVLSKDLEGKRVLVVDDNDHARLVMKDLLEQMKFVVETVE 801 + + + R L L+ ++LVVDD R ++ LL F +E Sbjct: 601 ILVDLGEITLSREPNSAKKVLALTPGQPVYKILVVDDKSVNRQLLIKLLAPFGFEIEEAS 660 Query: 802 SGPEALNFLAEADRENHPHSIVFIDWQMPNMDGLEVARRLKAMGLNHQPSIFIVTAYGRE 861 +G EA+ + PH ++F+D +MP MDG E + +K + ++ +TA E Sbjct: 661 NGQEAIALWESWE----PH-LIFMDMRMPVMDGYEATKYIKGQVKGNATAVVALTASVLE 715 Query: 862 ELFVKAKSLGIDDVLVKPISPSVLFDSLARVLGDPTALAQEMRQSSGIGAEDLALE 917 E S G DD L KP + +FDSL + LG E + ED AL+ Sbjct: 716 EEKAIVLSAGCDDFLRKPFRENTIFDSLTKHLG--VTYVYESAPNKNDNHEDTALK 769 Score = 75.5 bits (184), Expect = 1e-15 Identities = 45/137 (32%), Positives = 76/137 (55%), Gaps = 6/137 (4%) Query: 926 RILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIE 985 +IL+V+D +N+++ +LL GF ++ A+NG A+ + L+ MDM+MP MDG E Sbjct: 631 KILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYE 690 Query: 986 ATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEELWNKLLHWIPVD 1045 AT I+ + +VA+TA+V++ ++ L AG +D L KP +++ L + V Sbjct: 691 ATKYIKGQVKGNATAVVALTASVLEEEKAIVLSAGCDDFLRKPFRENTIFDSLTKHLGV- 749 Query: 1046 SPLAPETIEESAINTSD 1062 + ESA N +D Sbjct: 750 -----TYVYESAPNKND 761 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 200 bits (508), Expect = 3e-53 Identities = 133/382 (34%), Positives = 199/382 (52%), Gaps = 18/382 (4%) Query: 524 SRIKADFLANMSHEIRTPMNAVIGMTHLALKTDLTPRQREYLHKIRFSGQHLLGVINDIL 583 +R K +FLA++SHE+RTP+NA+IG + L + R L I SG+HLL +INDIL Sbjct: 160 NRAKTEFLASISHELRTPLNAIIGFSQLLHRDPSLAPHRPTLDIINRSGEHLLELINDIL 219 Query: 584 DFSKIEAGKLPMESIDFDLDKVLDNVATLISEKATNKGLELLFDIDRNLPRHFIGDPLRL 643 + SKIEAG+ + D ++LDN+ L +A K L L + +P D +L Sbjct: 220 EMSKIEAGRTTLNEKIIDCHRLLDNLQALFQLRAQEKQLLLKVERSPEVPEWIKTDGGKL 279 Query: 644 GQILINYANNAVKFTEQGDITIVVR------LQEYRDQDVVLYLAVKDTGIGIKPEHIAN 697 Q+LIN NA+KFT QG +T+ V+ E + + L+ V DTG GI + Sbjct: 280 RQVLINLLANAIKFTAQGGVTLKVKCLTAPQTDEGQGASIWLHFLVSDTGPGIAAHEMDE 339 Query: 698 LFNSFQQADSSTTRNFGGTGLGLAICKRIAELMGGEVGVESEYGQGSTFWAKVCLQ---K 754 LF F Q ++ ++ G GLGL I ++ +LMGG++ V S+ QGS F+ + +Q Sbjct: 340 LFVPFAQTETG-LKSCQGNGLGLPISQKFVQLMGGQIQVRSKVDQGSAFFFAIPVQVMAA 398 Query: 755 SNVIPHRLVLS---KDLEGKRVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLA 811 P ++ D ++VLVVDD +RL+++ LL + FVV+ E+G A+ Sbjct: 399 PKPTPETSAVTLPPLDQYNQKVLVVDDRPESRLLLRQLLTSLGFVVQEAENGEMAI---- 454 Query: 812 EADRENHPHSIVFIDWQMPNMDGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLG 871 A E+ ++ +D QMP +DG +++KA I +TA E + S G Sbjct: 455 -ALWESWHPQVILMDMQMPVLDGRSTTQKIKASPQGQHTIIIALTASAFEGERAEILSAG 513 Query: 872 IDDVLVKPISPSVLFDSLARVL 893 DD L KP P L LA+ L Sbjct: 514 CDDFLSKPFRPEELIALLAKHL 535 Score = 78.6 bits (192), Expect = 1e-16 Identities = 44/122 (36%), Positives = 69/122 (56%) Query: 926 RILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIE 985 ++L+V+D ++ + +LL +GF V A NG +A+ + ++LMDMQMP +DG Sbjct: 419 KVLVVDDRPESRLLLRQLLTSLGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRS 478 Query: 986 ATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEELWNKLLHWIPVD 1045 T I+ +P+ I+A+TA+ +G+R L AG +D L KP PEEL L + V Sbjct: 479 TTQKIKASPQGQHTIIIALTASAFEGERAEILSAGCDDFLSKPFRPEELIALLAKHLAVA 538 Query: 1046 SP 1047 P Sbjct: 539 LP 540 >SYNE-PCC-01-000891 sll1353 Length = 998 Score = 187 bits (476), Expect = 1e-49 Identities = 103/228 (45%), Positives = 147/228 (64%), Gaps = 5/228 (2%) Query: 524 SRIKADFLANMSHEIRTPMNAVIGMTHLALKTDLTPRQ-REYLHKIRFSGQHLLGVINDI 582 +R+K++FLAN+SHEIRTPMNA++G L L+ DL+ Q ++YL+ I S + LL +I+DI Sbjct: 597 NRVKSEFLANISHEIRTPMNAILGFCDLLLQKDLSLSQTKKYLNAIGSSSKILLALIDDI 656 Query: 583 LDFSKIEAGKLPMESIDFDLDKVLDNVATLISEKATNKGLELLFDIDRNLPRHFIGDPLR 642 LD SKIEAGKL + DL ++ + + KA +K L L ID L + D +R Sbjct: 657 LDISKIEAGKLVIHLEPVDLRVIIREIKQIFDYKAESKSLLLTIQIDETLNQAIYFDAVR 716 Query: 643 LGQILINYANNAVKFTEQGDITIVVRLQ--EYRDQDVVLYLAVK--DTGIGIKPEHIANL 698 L QIL N NA+KFTE+G + I + ++ + R Q + LA++ DTGIGI PE A + Sbjct: 717 LRQILFNLVGNALKFTEEGQVFIYIGVEGIQVRSQGTYISLAIEVTDTGIGIAPEDQAKI 776 Query: 699 FNSFQQADSSTTRNFGGTGLGLAICKRIAELMGGEVGVESEYGQGSTF 746 F+ F Q+ +TR +GGTGLGL I +R+ L+GGE+ + S G+GSTF Sbjct: 777 FDVFTQSQGQSTRKYGGTGLGLTITRRLTALLGGEISLSSRLGEGSTF 824 >SYNE-PCC-01-000295 sll0474 Length = 806 Score = 169 bits (427), Expect = 6e-44 Identities = 113/320 (35%), Positives = 168/320 (52%), Gaps = 22/320 (6%) Query: 445 YVDLGDR-------QQMLEELTQFGRSQSRVYKMYNPRGEIRDILATFLATDYEGQK--G 495 ++ LGDR +Q LE+ T S ++ GEI L +G+ Sbjct: 330 FIHLGDRPMFWQAIEQSLEDPTM---ELSTELRLEAANGEIYHCLLRGQIHQEQGEAFVK 386 Query: 496 ILGWLADITPIXXXXXXXXXXXXXXXXXSRIKADFLANMSHEIRTPMNAVIGMTHLALKT 555 I+G +ADIT I +++K +FLANMSHE+RTP+N+++GM Sbjct: 387 IIGTIADITEIKKAEEQLKLSNKILAKATQLKDEFLANMSHELRTPLNSILGMIETLQNQ 446 Query: 556 DLTP---RQREYLHKIRFSGQHLLGVINDILDFSKIEAGKLPMESIDFDLDKVLDNVATL 612 P +Q + L + SG+HLL +INDILD SKIEAG++ ++ + ++++ T Sbjct: 447 VYGPLNGKQVQSLEIVENSGRHLLSLINDILDLSKIEAGRMDLDLNPTSVSALVNHSLTF 506 Query: 613 ISEKATNKGLELLFDIDRNLPRHFIGDPLRLGQILINYANNAVKFTEQGDITIVV----- 667 + + A K + L +I NLP + D RL Q+LIN NNA+KFT +G +V Sbjct: 507 VQQFAIQKQINLSSEIIPNLPDVLV-DKRRLCQVLINLLNNAIKFTPEGGKVVVQADLIK 565 Query: 668 -RLQEYRDQDVVLYLAVKDTGIGIKPEHIANLFNSFQQADSSTTRNFGGTGLGLAICKRI 726 + +E L V DTGIGI+ + + N+F F Q DS+ R + GTGLGL++ K+I Sbjct: 566 EQGKENSQSPPQLSFTVFDTGIGIEADRLNNIFEPFVQIDSALNRRYDGTGLGLSLVKKI 625 Query: 727 AELMGGEVGVESEYGQGSTF 746 EL GG V V S+ +GS F Sbjct: 626 VELHGGSVTVTSKLNEGSRF 645 >SYNE-PCC-01-001280 sll1871 Length = 674 Score = 164 bits (416), Expect = 1e-42 Identities = 97/228 (42%), Positives = 143/228 (62%), Gaps = 7/228 (3%) Query: 527 KADFLANMSHEIRTPMNAVIGMTHLALKTDLTPRQREY---LHKIRFSGQHLLGVINDIL 583 K+ FLANMSHE+RTP+NA+IG + + ++ E L KI SG+ LL +IND+L Sbjct: 438 KSIFLANMSHELRTPLNAIIGYSEMLIEEAEDLDSEELVPDLDKILRSGKSLLALINDLL 497 Query: 584 DFSKIEAGKLPMESIDFDLDKVLDNVATLISEKATNKGLELLFDIDRNLPRHFIGDPLRL 643 D SKIEAGK+ + F+L +++ + IS N +L +I + GD ++L Sbjct: 498 DISKIEAGKMELYLETFNLKELIAGILDTISPLLKNNNNKLEVEISLESEEVY-GDLIKL 556 Query: 644 GQILINYANNAVKFTEQGDITIVVRLQEYR-DQDVVLYLAVKDTGIGIKPEHIANLFNSF 702 Q ++N +NA KFT+ G I+ +V +E++ D+ L VKDTGIG+ E ++ LF F Sbjct: 557 RQGILNLLSNASKFTKDGIISFIV--EEFKVDEKDWLSFQVKDTGIGLTEEQMSKLFQPF 614 Query: 703 QQADSSTTRNFGGTGLGLAICKRIAELMGGEVGVESEYGQGSTFWAKV 750 QADSSTTR +GGTGLGLAI ++ ++MGG++ + SE G GS+F K+ Sbjct: 615 TQADSSTTRKYGGTGLGLAITRKFCQMMGGDIYLTSEIGVGSSFTIKL 662 >SYNE-PCC-01-001294 sll1888 Length = 432 Score = 145 bits (366), Expect = 8e-37 Identities = 91/240 (37%), Positives = 132/240 (55%), Gaps = 9/240 (3%) Query: 524 SRIKADFLANMSHEIRTPMNAVIGMTHLALK--TDLTPRQREYLHKIRFSGQHLLGVIND 581 SR+K++FLA+ +HE+RTP+N +IG L L D + E++ + S LL +IND Sbjct: 191 SRLKSEFLASTTHELRTPLNGIIGFLRLILDDMADSEAEKHEFVEEAYQSALLLLNLIND 250 Query: 582 ILDFSKIEAGKLPMESIDFDLDKVLDNVATLISEKATNKGLELLFDIDRNLPRHFIGDPL 641 ILD +KIEAG++ +E D +VL +A NKGL P G+ Sbjct: 251 ILDLAKIEAGRVGIELEVVDFSEVLQATENFALPQAQNKGLSFNLTAPNQGPLLVYGNQR 310 Query: 642 RLGQILINYANNAVKFTEQGDITIVVR------LQEYRDQDVVLYLAVKDTGIGIKPEHI 695 L Q+++N NA+KFT +G IT+ V L E + +L ++V DTGIG+ E Sbjct: 311 WLLQVMLNIVGNAIKFTHEGGITVAVEVMPRTVLWEGVQKPGLLKVSVGDTGIGVSLEQQ 370 Query: 696 ANLFNSFQQADSSTTRNFGGTGLGLAICKRIAELMGGEVGVES-EYGQGSTFWAKVCLQK 754 + LF F Q D S ++ +GGTGLGL I +++ E MGG+V S G GST V L++ Sbjct: 371 SKLFKKFVQIDGSHSKAYGGTGLGLVISQKLVETMGGKVAFFSMGEGLGSTVTFTVLLEE 430 >SYNE-PCC-01-002778 slr1969 Length = 750 Score = 138 bits (348), Expect = 9e-35 Identities = 107/383 (27%), Positives = 187/383 (48%), Gaps = 24/383 (6%) Query: 526 IKADFLANMSHEIRTPMNAVIGMTHLALK-----TDLTP-RQREYLHKIRFSGQHLLGVI 579 +K+ F+ N+SHE+RTP+ ++IG++ L+ L P +Q+ YL I+ +G+ LL I Sbjct: 378 LKSQFINNISHELRTPLTSIIGLSATLLRWFDHPASLPPAKQQYYLLNIQENGKKLLDQI 437 Query: 580 NDILDFSKIEAGKLPMESIDFDLDKVLDNVATLISEKATNKGLELLFDIDRNLPR-HFIG 638 N I+ S++E+G+ + F L + V + A + + L D N+ + F Sbjct: 438 NSIIQLSQLESGQTALNCQSFSLHTLAQTVIHSLLGVAIKQQINLELDYQINVGQDQFCA 497 Query: 639 DPLRLGQILINYANNAVKFTEQGDITIVVRLQEYRDQDVVLYLAVKDTGIGIKPEHIANL 698 D RL QIL NNA+KFT + T+++R+ + +Q + V+DTGIGI + + L Sbjct: 498 DQERLDQILTQLLNNALKFTP-AEGTVILRIWKESNQAI---FQVEDTGIGINEQQLPVL 553 Query: 699 FNSFQQADSSTTRNFGGTGLGLAICKRIAELMGGEVGVESEYGQGSTFWAKVCLQK---- 754 F +F+ A S T + G+GLA+ K++ EL GG + VES GQG+ F + Q Sbjct: 554 FEAFKVAGDSYTSFYETGGVGLALTKQLVELHGGYIEVESSPGQGTIFTTVIPQQNFPPT 613 Query: 755 -SNVIPHRLVLSKDLEGKRVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEA 813 + +L + +++ D + A L+ +LL + V + AL + Sbjct: 614 TKGQVQDKLDAAMPFNSSVIVIEQDEEIATLIC-ELLTVANYQVIWLIDTTNALQQV--- 669 Query: 814 DRENHPHSIVFIDWQMPNMDGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGID 873 E ++ +D +D EV R +K + ++F+++ + GID Sbjct: 670 --ELLQPGLIIVDGDF--VDVTEVTRGIKKSRRISKVTVFLLSESLSSAEWQALSQKGID 725 Query: 874 DVLVKPISPSVLFDSLARVLGDP 896 D L+KP+ P +L + + +P Sbjct: 726 DYLLKPLQPELLLQRVQSIQQEP 748 >SYNE-PCC-01-001517 slr0222 Length = 1178 Score = 137 bits (345), Expect = 2e-34 Identities = 153/625 (24%), Positives = 276/625 (44%), Gaps = 49/625 (7%) Query: 162 VIAVMLAFVALLFRFHSAKIFHTTHGPALGSSALVMGLSTSGMHYTAMTATHFICRPWGE 221 +I + + F+ L + + ++ +G S L + L T + HF E Sbjct: 564 IILITIDFIVLEVNYRAVELSGYDQEELIGHSLLDLRLLTPEFY---AQQRHFWRTLKRE 620 Query: 222 FFIQGIDIQEVA-----IAVTISITLLT---GGVMLFVLREISIQNQQQKILVATESWYR 273 Q D++ V I+V IS +++T ++ ++ +I++Q Q L + R Sbjct: 621 QISQLTDVRLVKKSGELISVDISASVITYENHSIVQCIVHDITLQKTIQAQLQRENYFRR 680 Query: 274 QIIEYAPEGIMVLDAQGNI-----ILANTSIEKLFGYSQTELIGXXXXXXXXXXXXXXXX 328 Q++E EG+ V + N ++ + GYSQ E I Sbjct: 681 QLLEKMVEGLFVCYEVEQFPFLQFTVWNPMMKNITGYSQEE-INQCGWYETLYSHGQPQE 739 Query: 329 XXXXXXEDVGPTCPLDQEEFEILGTRYDGSEFPIEVSLTSLPSLSQREMNIFASVRDISA 388 + V + +EE++I+ R DG+ +E+S + S +Q NI A ++DI+ Sbjct: 740 AVRVRMKAVALGVDMVKEEWQII--RRDGALRTVEISTALITSNNQT--NILAVIQDITD 795 Query: 389 RQEAQQQILRQREHLQSVLDSAPVGVAITVNGITQ--FANPHIGELVDLKVGDSPQKIYV 446 ++ Q I L+ ++++ P+ + + + NP L G +P ++Y Sbjct: 796 QKRQLQIIQNNEATLRCIVENLPIFFGMRTINFSNWYYINPSFESLT----GYTPDEMYE 851 Query: 447 D-----LGDRQQMLEELTQF--GRSQSRVYKMYNPRG-EIRDILATFLATDYEGQKGILG 498 D R++ E L Q + ++ M G +I FL D ++ Sbjct: 852 DPLLWQKIHREEYAENLEQARPNLGEWTIFSMEKKDGTQIWAQTVEFLVDDLSDTARVVV 911 Query: 499 WLADITPIXXXXXXXXXXXXXXXXXSRIKADFLANMSHEIRTPMNAVIGMTHLALKTD-- 556 + DIT I + K+ F+ +SHE RTP+ ++IG L K Sbjct: 912 FGQDITDIKRAEIETLRSLVKERELNEAKSQFVDIVSHEFRTPLTSIIGFGELLSKYFDR 971 Query: 557 -LTPRQREYLHKIRFSGQHLLGVINDILDFSKIEAGKLPMESIDFDLDKVLDNVATLISE 615 T ++++Y++ I+ S Q L +I+D+L S+ +A K+ +E + +L + ++ LI Sbjct: 972 LSTEKKQQYINNIQNSSQRLKQLIDDVLSISRYDANKIEIELGNINLRNLAND---LIEN 1028 Query: 616 KATNKGLELLFDIDRNLP--RHFIGDPLRLGQILINYANNAVKFTEQGDITIVVRLQEYR 673 + G E F+++ +L H + D L IL N +NA+K++ G + L + Sbjct: 1029 FSCGLGSEHNFELNYHLKPDEHSLVDVRLLRHILENILSNAIKYSAPGS---TITLDISK 1085 Query: 674 DQDVVLYLAVKDTGIGIKPEHIANLFNSFQQADSSTTRNFGGTGLGLAICKRIAELMGGE 733 D++ +L+ V+D GIGI + LF +F +A S + GTGLGL+I KR E GG Sbjct: 1086 DEEHLLF-QVRDEGIGIPLQDQEKLFEAFHRA--SNVGDIPGTGLGLSIVKRYVEFQGGT 1142 Query: 734 VGVESEYGQGSTFWAKVCLQKSNVI 758 + V S G+G+T K+ L + +I Sbjct: 1143 IEVISMPGKGTTMVIKLPLNPAPII 1167 Score = 59.7 bits (143), Expect = 5e-11 Identities = 52/228 (22%), Positives = 96/228 (42%), Gaps = 33/228 (14%) Query: 234 IAVTISITLLTGGVMLFVLREISIQNQQQKILVATESWYRQIIEYAPEGIMVLDAQGNII 293 + + + + GG+ L+ R+IS ++++ + +E+ +R I +G++VLD I Sbjct: 242 LLINLKKVAINGGIYLYSCRDISEWARKEQAIRNSEANFRDIFASIKDGLLVLDEDNYIC 301 Query: 294 LANTSIEKLFGYSQTELIGXXXXXXXXXXXXXXXXXXXXXXEDVGPTCPLDQEEFEILGT 353 AN KL + EL+G PL+ EF +L Sbjct: 302 YANAQAVKLLNCTLEELVGTIGS-------------------------PLEDTEFSLLVD 336 Query: 354 RYDGSEFPIEVSLTSLPSLSQREMNIFASVRDISARQEAQQQILRQREHLQSVLDSAPVG 413 DG+ + ++VS+T + Q S+RDIS R+ + Q+ + +L++ G Sbjct: 337 --DGTIYTVDVSVTEITWYGQTAK--LVSLRDISDRKRMENQLRENQNKYYRLLENLDNG 392 Query: 414 VAI-TVNGITQFANPHIGE---LVDLKVGDSPQKIYVDLGDRQQMLEE 457 V + N +ANP L DL+ D + ++ + LE+ Sbjct: 393 VIVHNANAEIVYANPKAESFLGLTDLEGRDIDDEYWMFFDKEGEKLEK 440 Score = 42.7 bits (99), Expect = 7e-06 Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 14/119 (11%) Query: 772 RVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPN 831 +VL+VDD + + L+ + + T SG EA+ A + +++ + +M Sbjct: 8 KVLLVDDQRENLVALSRALDSLPVEIITANSGQEAIATAATTE-----FALMILAQEMSE 62 Query: 832 MDGLEVARRLKAMGLNHQ-PSIFIVTAYGREELFVKAKS----LGIDDVLVKPISPSVL 885 +DGL A+ L++ L Q P IF+ R+E+ KA + LG+ D L +P + + L Sbjct: 63 LDGLNTAKILRSFPLAEQTPIIFL----ARQEIITKAMAEINILGLVDFLAQPPNQNFL 117 >SYNE-PCC-01-001509 slr0210 Length = 417 Score = 130 bits (326), Expect = 3e-32 Identities = 84/228 (36%), Positives = 125/228 (54%), Gaps = 9/228 (3%) Query: 531 LANMSHEIRTPMNAVIGMTHLA---LKTDLTPRQREYLHKIRFSGQHLLGVINDILDFSK 587 L+++ HE RTP+ A+IG + L L P+Q +Y+ S +HLL ++ND LD SK Sbjct: 190 LSHIHHEFRTPLTAIIGFARMLRDELYGKLNPKQHQYVQGTLNSAEHLLSLVNDFLDLSK 249 Query: 588 IEAGKLPMESIDFDLDKVLDNVATLISEKATNKGLELLFDIDRNLPRHFIGDPLRLGQIL 647 I+A + ++ + V +++ KA K L L ID + ++ D R QIL Sbjct: 250 IDARCEELFYEQVAVEDLCLAVISMVQTKAKEKQLALNLTIDDGVDFCYV-DQRRWKQIL 308 Query: 648 INYANNAVKFTEQGDITIVVRLQEYRDQDVVLYLAVKDTGIGIKPEHIANLFNSFQQADS 707 IN +N VKFT +G +T+ V+ D L +V DTGIGI PE +LF F+Q Sbjct: 309 INLLSNGVKFTPKGSVTLAVKAT-----DKALIFSVIDTGIGIDPEDQRDLFQPFKQISH 363 Query: 708 STTRNFGGTGLGLAICKRIAELMGGEVGVESEYGQGSTFWAKVCLQKS 755 + GTGLGLA+ +R+A+L GG++ + S G GS F A + L+ S Sbjct: 364 PPSFAEKGTGLGLALSRRLAQLHGGDIQLTSTPGVGSCFSAILPLKTS 411 >SYNE-PCC-01-000985 sll1475 Length = 297 Score = 92.8 bits (229), Expect = 6e-21 Identities = 74/242 (30%), Positives = 121/242 (50%), Gaps = 18/242 (7%) Query: 524 SRIKADFLANMSHEIRTPMNAVIGMTHLALKTD---LTPRQREY-LHKIRFSGQHLLGVI 579 SR+K F + SHE RTP++ + L ++ L P +R LH+I+ S ++++ ++ Sbjct: 66 SRLKTRFFSMASHEFRTPLSTALAAAQLLENSEVAWLDPDKRSRNLHRIQNSVKNMVQLL 125 Query: 580 NDILDFSKIEAGKLPMESIDFDLDKVLDNVATLISEKATNKGLELLFD-IDRNLPRHFIG 638 +DIL ++ EAGKL DL + I E + + FD I + Sbjct: 126 DDILIINRAEAGKLEFNPNWLDLKLLFQQ---FIEEIQLSVSDQYYFDFICSAQDTKALV 182 Query: 639 DPLRLGQILINYANNAVKFTEQG-DITIVVRLQEYRDQDVVLYLAVKDTGIGIKPEHIAN 697 D + IL N +NA+K++ G I I + L D + +++ V D GIGI PE Sbjct: 183 DERLVRSILSNLLSNAIKYSPGGGQIKIALSL----DSEQIIF-EVTDQGIGISPEDQKQ 237 Query: 698 LFNSFQQADSSTTRNFGGTGLGLAICKRIAELMGGEVGVESEYGQGSTFWAKVCLQKSNV 757 +F F + + RN GTGLGL + K+ +L G + ++S QG+T +CL++ N Sbjct: 238 IFEPFHRGKN--VRNITGTGLGLMVAKKCVDLHSGSILLKSAVDQGTT--VTICLKRYNH 293 Query: 758 IP 759 +P Sbjct: 294 LP 295 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 89.4 bits (220), Expect = 6e-20 Identities = 47/114 (41%), Positives = 74/114 (64%) Query: 925 ARILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGI 984 A++LLVEDNE+N+++ + L G+ V +A +G A+ + + L+LMDM +P +DG Sbjct: 5 AKVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGW 64 Query: 985 EATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEELWNKL 1038 AT I+ +P A +PI+A+TA+ M DRER + AG +D+ KPIE + L K+ Sbjct: 65 TATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKM 118 >SYNE-PCC-01-001690 slr0473 Length = 748 Score = 84.7 bits (208), Expect = 2e-18 Identities = 61/221 (27%), Positives = 110/221 (49%), Gaps = 18/221 (8%) Query: 535 SHEIRTPMNAV---IGMTHLALKTDLTPRQREYLHKIRFSGQHLLGVINDILDFSKIEA- 590 SH+++ P+N V + + + L ++++ + +I+DIL ++K++ Sbjct: 537 SHDLQEPLNQVSNYVQLLEMRYSEALDEDAKDFIDFAVTGVSLMQTLIDDILTYAKVDTQ 596 Query: 591 -GKLPMESIDFDLDKVLDNVATLISEKATNKGLELLFDIDRNLPRHFIGDPLRLGQILIN 649 +L + +DK L N+ I E +I+ + D ++L Q+ N Sbjct: 597 YAQLTFTDVQEVVDKALANLKQRIEESGA--------EIEVGSMPAVMADQIQLMQVFQN 648 Query: 650 YANNAVKFTEQGDITIVVRLQEYRDQDVVLYLAVKDTGIGIKPEHIANLFNSFQQADSST 709 N +KF GD + +++ R +D ++ AV+D GIGI P+ +F FQ+ T Sbjct: 649 LIANGIKFA--GDKSPKIKIWGDRQEDAWVF-AVQDNGIGIDPQFFERIFVIFQRLH--T 703 Query: 710 TRNFGGTGLGLAICKRIAELMGGEVGVESEYGQGSTFWAKV 750 + GTG+GLAICK+I E G++ +ES G+GSTF+ + Sbjct: 704 RDEYKGTGMGLAICKKIIEGHQGQIWLESNPGEGSTFYFSI 744 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 77.4 bits (189), Expect = 3e-16 Identities = 43/109 (39%), Positives = 65/109 (59%), Gaps = 1/109 (0%) Query: 927 ILLVEDNEINQEVAAELLRDVG-FNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIE 985 +LLV+D +E L D G F VD+AAN A + L ++ ALV+ D+ MP++DG + Sbjct: 58 LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQVDGYQ 117 Query: 986 ATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEEL 1034 +R++ R+ LP+V +TA M GDR + Q G + L KP +P+EL Sbjct: 118 FLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDEL 166 Score = 44.3 bits (103), Expect = 2e-06 Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 27/197 (13%) Query: 773 VLVVDDNDHARLVMKDLLEQM-KFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPN 831 +L+VDD R ++ LE F V+ + EA ++L ++H ++V D MP Sbjct: 58 LLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYL-----QHHLPALVISDIMMPQ 112 Query: 832 MDGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISP----SVLFD 887 +DG + ++L+ + +TA G ++ G D L KP P +++ + Sbjct: 113 VDGYQFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRN 172 Query: 888 SLAR----------------VLGDPTALAQEMRQSSGIGAEDLALEKLRRIRGARIL-LV 930 LAR + + AL +++ Q SGI ++ R +L LV Sbjct: 173 LLARQQASSDAGSESAKLQEIYQEIRALKEQIGQPSGIHTTPSPIKLDFTPREQSVLDLV 232 Query: 931 EDNEINQEVAAELLRDV 947 +N+E+AA+L V Sbjct: 233 SQGLMNKEIAAQLKTSV 249 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 74.3 bits (181), Expect = 2e-15 Identities = 36/108 (33%), Positives = 68/108 (62%) Query: 927 ILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIEA 986 +LLVED+ +E+ + +L+D G+ V +A +G+ ALE+L N + LV++D+ MP M+G E Sbjct: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYEV 89 Query: 987 TIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEEL 1034 I+ +P+ +P++ ++ + DR ++ G + ++ KP +P EL Sbjct: 90 CRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMEL 137 Score = 46.2 bits (108), Expect = 6e-07 Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 5/121 (4%) Query: 773 VLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPNM 832 VL+V+D+ R ++ +L+ + V G EAL L +N +V +D MP M Sbjct: 30 VLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKL-----QNFSPDLVVLDIVMPRM 84 Query: 833 DGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISPSVLFDSLARV 892 +G EV RR+K+ + + ++ G E G D + KP P L ++ ++ Sbjct: 85 NGYEVCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTIKQL 144 Query: 893 L 893 L Sbjct: 145 L 145 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 70.5 bits (171), Expect = 3e-14 Identities = 43/110 (39%), Positives = 68/110 (61%), Gaps = 4/110 (3%) Query: 925 ARILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGI 984 +++LLV+D+ E+ + LL GF+V+ A NGL AL++L N +Y LVL+D+ MP+++GI Sbjct: 2 SKLLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKL-NESYKLVLLDVMMPKLNGI 60 Query: 985 EATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEEL 1034 E IR + + +P++ +TA DR L+ G +D L KP EL Sbjct: 61 ETLKEIR---KVSNVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDREL 107 Score = 53.5 bits (127), Expect = 4e-09 Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 9/122 (7%) Query: 772 RVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPN 831 ++L+VDD+ ++ LLE F VET +G EAL L N + +V +D MP Sbjct: 3 KLLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKL------NESYKLVLLDVMMPK 56 Query: 832 MDGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISPSVLFDSLAR 891 ++G+E + ++ + + ++TA G + V LG DD L KP + L + Sbjct: 57 LNGIETLKEIRKVS---NVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKA 113 Query: 892 VL 893 +L Sbjct: 114 IL 115 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 68.2 bits (165), Expect = 2e-13 Identities = 36/108 (33%), Positives = 59/108 (54%) Query: 927 ILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIEA 986 +LLV+D+ + + L G+ V A NG AL+ L +++ D+ MPEMDG Sbjct: 10 LLLVDDDPNLLLLVKDYLEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMDGYAF 69 Query: 987 TIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEEL 1034 +RQNP + +P++ ++A +R + L G + ++ KP EPEEL Sbjct: 70 IEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEEL 117 Score = 52.0 bits (123), Expect = 1e-08 Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 5/138 (3%) Query: 764 LSKDLEGKRVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIV 823 +S+ E +L+VDD+ + L++KD LE + V T +G EAL+ L + ++ Sbjct: 1 MSQSKENYHLLLVDDDPNLLLLVKDYLEYQGYQVTTAGNGREALDLLTTTVPD-----MI 55 Query: 824 FIDWQMPNMDGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISPS 883 D MP MDG +++ + ++A G+ VK ++G D + KP P Sbjct: 56 VCDIMMPEMDGYAFIEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPE 115 Query: 884 VLFDSLARVLGDPTALAQ 901 L + L L Q Sbjct: 116 ELAAQVQSCLRQADRLLQ 133 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 67.4 bits (163), Expect = 3e-13 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 18/148 (12%) Query: 926 RILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIE 985 RILLVED+ E AE L D + VD+A + +A + + Y LV++D+ +PE+DGI Sbjct: 2 RILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGI- 60 Query: 986 ATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEELWNK-------- 1037 T+ + +PI+ MTA D+ L AG +D++ KP++ EL+ + Sbjct: 61 -TLCQKWRSHSYLMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELFARVRALLRRG 119 Query: 1038 ------LLHWIPVDSPLAPETIEESAIN 1059 +L W P+ L P T E S N Sbjct: 120 CATCQPVLEWGPI--RLDPSTYEVSYDN 145 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 65.9 bits (159), Expect = 8e-13 Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 2/112 (1%) Query: 927 ILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYA--LVLMDMQMPEMDGI 984 IL+VED I +E+ E L + + A NG +AL LN+ L++ D+ MPEMDG Sbjct: 4 ILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMDGH 63 Query: 985 EATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEELWN 1036 A+++N + A +P + +TA D + + +G +D+L KP + E+L N Sbjct: 64 GLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLN 115 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 63.9 bits (154), Expect = 3e-12 Identities = 39/121 (32%), Positives = 67/121 (55%), Gaps = 8/121 (6%) Query: 772 RVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPN 831 R+L+V+D + +K +L K+VV+ V G +A ++L E +++ +DW +P Sbjct: 2 RILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTE---YTLAIVDWLLPG 58 Query: 832 MDGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISPSVLFDSLAR 891 + GLE+ ++L+ G N P + ++TA G E V+ G DD L KP V+ + LAR Sbjct: 59 LSGLELCQKLRTQG-NSLP-VLMLTALGEPENRVEGLDAGADDYLTKPF---VMAELLAR 113 Query: 892 V 892 + Sbjct: 114 L 114 Score = 45.4 bits (106), Expect = 1e-06 Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 4/115 (3%) Query: 926 RILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNN--AYALVLMDMQMPEMDG 983 RILLVED ++L + VD +G A + L N Y L ++D +P + G Sbjct: 2 RILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSG 61 Query: 984 IEATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEELWNKL 1038 +E +R LP++ +TA +R L AG +D+L KP EL +L Sbjct: 62 LELCQKLRTQGN--SLPVLMLTALGEPENRVEGLDAGADDYLTKPFVMAELLARL 114 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 63.2 bits (152), Expect = 5e-12 Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 17/160 (10%) Query: 926 RILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIE 985 +IL+VED +E+ A L ++V A++ A+ ++ N L+L+D +P GI+ Sbjct: 4 KILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKENP-KLILLDWMLPGRSGIQ 62 Query: 986 ATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEP-------EELWNKL 1038 I++ YA +PI+ +TA + D CL AG +D++ KP P E +W ++ Sbjct: 63 FIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQILLARIEAVWRRI 122 Query: 1039 L----HWIPVDSPLAPET-----IEESAINTSDPEISIPH 1069 +I +D E ++ IN S E + H Sbjct: 123 YEQQSQFIQIDELSIDENAQRVFFQQQEINLSSTEFKLLH 162 Score = 50.1 bits (118), Expect = 4e-08 Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 16/166 (9%) Query: 771 KRVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMP 830 +++L+V+D R ++ L Q + V A+N + E + ++ +DW +P Sbjct: 3 RKILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKENPK------LILLDWMLP 56 Query: 831 NMDGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISPSVLFDSLA 890 G++ + +K I ++TA EE + + G DD + KP SP +L LA Sbjct: 57 GRSGIQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQIL---LA 113 Query: 891 RVLGDPTALAQEMRQSSGIGAEDLALEKLRRIRGARILLVEDNEIN 936 R+ + ++ QS I ++L++++ A+ + + EIN Sbjct: 114 RIEAVWRRIYEQ--QSQFIQIDELSIDE-----NAQRVFFQQQEIN 152 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 62.4 bits (150), Expect = 8e-12 Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 11/138 (7%) Query: 773 VLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPNM 832 +L+V+D+ ++++ LE+ +F G L E + ++ +D +P + Sbjct: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPD-----LIVLDLMLPKL 68 Query: 833 DGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISPSVLFDSLARV 892 DGLEV R++ + P I ++TA G E + S G DD LVKP SP L +ARV Sbjct: 69 DGLEVCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPREL---VARV 125 Query: 893 LGDPTALAQEMRQSSGIG 910 L +++RQ +G Sbjct: 126 ---RALLRRQLRQGQPVG 140 Score = 58.5 bits (140), Expect = 1e-10 Identities = 35/108 (32%), Positives = 54/108 (50%) Query: 927 ILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIEA 986 IL+VED++ ++ E L F V +G L L+++D+ +P++DG+E Sbjct: 14 ILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLEV 73 Query: 987 TIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEEL 1034 IRQ P I+ +TA + DR L G +D+L KP P EL Sbjct: 74 CTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPREL 121 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 62.0 bits (149), Expect = 1e-11 Identities = 33/108 (30%), Positives = 62/108 (57%) Query: 927 ILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIEA 986 ILLV+D N ++ ++LL ++G+ V +G +AL L L+L+D++MP+MDG + Sbjct: 11 ILLVDDLPNNLQLLSDLLINLGYTVRSVTSGKMALRTLQVKRPDLILLDIKMPDMDGYQV 70 Query: 987 TIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEEL 1034 I++ +PI+ ++A D+ + + G D++ KP + EE+ Sbjct: 71 CEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQIEEV 118 Score = 46.6 bits (109), Expect = 5e-07 Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 14/139 (10%) Query: 773 VLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPNM 832 +L+VDD + ++ DLL + + V +V SG AL L + P ++ +D +MP+M Sbjct: 11 ILLVDDLPNNLQLLSDLLINLGYTVRSVTSGKMALRTL----QVKRP-DLILLDIKMPDM 65 Query: 833 DGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISPSVLFDSLARV 892 DG +V +K I ++A G VKA G D + KP + + +AR+ Sbjct: 66 DGYQVCEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQ---IEEVVARI 122 Query: 893 LGDPT------ALAQEMRQ 905 G T AL +E+R+ Sbjct: 123 EGQFTIQRQRIALKREVRK 141 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 58.2 bits (139), Expect = 2e-10 Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 2/113 (1%) Query: 926 RILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIE 985 RILL+ED+ + L +GF VD +G + L + Y V++D+ +P++DG+E Sbjct: 2 RILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLE 61 Query: 986 ATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEELWNKL 1038 R N + +P++ +TA +R + LQ+G +D+L KP E+ +L Sbjct: 62 VLQQWRSN--HQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARL 112 Score = 44.7 bits (104), Expect = 2e-06 Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 9/111 (8%) Query: 772 RVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPN 831 R+L+++D++ ++ L ++ F V+ G + L A P+ V +D +P Sbjct: 2 RILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSA-----PYDAVVLDLTLPK 56 Query: 832 MDGLEVARRLKAMGLNHQP-SIFIVTAYGREELFVKAKSLGIDDVLVKPIS 881 +DGLEV ++ ++ NHQ + I+TA + VK G DD L KP + Sbjct: 57 LDGLEVLQQWRS---NHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFA 104 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 55.5 bits (132), Expect = 1e-09 Identities = 28/109 (25%), Positives = 60/109 (55%) Query: 926 RILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIE 985 RIL+++D+ ++ + L G++V A +G+ L+++D+ +P++DG Sbjct: 3 RILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFT 62 Query: 986 ATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEEL 1034 +R++ R A +P++ +TA D+ + +G +D+L KP + EE+ Sbjct: 63 VCQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKPFDVEEM 111 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 55.1 bits (131), Expect = 1e-09 Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 5/122 (4%) Query: 772 RVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPN 831 ++LVVDD+ R+ ++ L++ VE +G EAL AE E +V +D MP Sbjct: 13 KILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPE-----VVLLDAVMPV 67 Query: 832 MDGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISPSVLFDSLAR 891 MDG + L + N P + ++T E +A G D + KPI +VL + R Sbjct: 68 MDGFACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKR 127 Query: 892 VL 893 +L Sbjct: 128 LL 129 Score = 48.5 bits (114), Expect = 1e-07 Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 8/109 (7%) Query: 925 ARILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGI 984 A+IL+V+D+ + L+ G V++A NG AL + +VL+D MP MDG Sbjct: 12 AKILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGF 71 Query: 985 ---EATIAIRQNPRYAQLPIVAMTANV-MQGDRERCLQAGMNDHLGKPI 1029 +A + I QNP P+V M + + +R +AG D++ KPI Sbjct: 72 ACCQALMKIYQNPS----PLVLMITGLDDEASVDRAFEAGAIDYVTKPI 116 >SYNE-PCC-01-001575 slr0312 Length = 209 Score = 55.1 bits (131), Expect = 1e-09 Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 4/152 (2%) Query: 926 RILLVEDNEI-NQEVAAELLRDVGFNVDVAA-NGLIALERLNNNAYALVLMDMQMPEMDG 983 R+L+ +D+ I Q +A + RD V A NG A+ + + LMD++MPE++G Sbjct: 8 RVLIADDHAIFRQGLATIINRDPDMQVIAQAENGEQAIALFEEHQPDVTLMDLRMPEVEG 67 Query: 984 IEATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEELWNKLLHWIP 1043 + A AI ++A+ I+ +T D R LQAG +L K EP+EL N + Sbjct: 68 VAAISAICAIVKFAR--IIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHR 125 Query: 1044 VDSPLAPETIEESAINTSDPEISIPHIPGLNS 1075 + P+ + S+PE+S + L S Sbjct: 126 GQKYIPPDVGAKLVQRLSNPELSERELEVLGS 157 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 54.3 bits (129), Expect = 2e-09 Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 2/110 (1%) Query: 925 ARILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGI 984 A ILLV+D E ++ L G +DVA G L Y L+++D +P++ G+ Sbjct: 2 ANILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGL 61 Query: 985 EATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEEL 1034 E IR P++ +TA DR L AG +D+L KP E EL Sbjct: 62 EICRQIRILGH--STPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFELREL 109 Score = 46.2 bits (108), Expect = 6e-07 Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 10/120 (8%) Query: 773 VLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPNM 832 +L+VDD + + L ++ + G L + ++ +DW +P + Sbjct: 4 ILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQ-----YDLLILDWMLPQV 58 Query: 833 DGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISPSVLFDSLARV 892 GLE+ R+++ +G H + +TA + V G DD L+KP L + LARV Sbjct: 59 SGLEICRQIRILG--HSTPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFE---LRELLARV 113 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 53.5 bits (127), Expect = 4e-09 Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 4/125 (3%) Query: 759 PHRLVLSKDLEGKRVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAE--ADRE 816 PH L + R+LVV+D R + L++ + V V+ G +AL L E D Sbjct: 19 PHSLQHQEIPPSHRILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPG 78 Query: 817 NHPHSIVFIDWQMPNMDGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVL 876 ++ +D +P ++GL+V R L+ G N I IV+A G E V +G DD + Sbjct: 79 QAAVDLIILDIMLPQVNGLDVCRSLRFGGDN--TPILIVSAKGSEMEKVTGLEVGADDYI 136 Query: 877 VKPIS 881 KP S Sbjct: 137 TKPFS 141 Score = 43.1 bits (100), Expect = 5e-06 Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 9/116 (7%) Query: 926 RILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNN-------NAYALVLMDMQM 978 RIL+VED +E L++ G+ V +G AL L A L+++D+ + Sbjct: 32 RILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQEFSEDPGQAAVDLIILDIML 91 Query: 979 PEMDGIEATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEEL 1034 P+++G++ ++R PI+ ++A + ++ L+ G +D++ KP +EL Sbjct: 92 PQVNGLDVCRSLRFGGD--NTPILIVSAKGSEMEKVTGLEVGADDYITKPFSLKEL 145 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 53.1 bits (126), Expect = 5e-09 Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 3/109 (2%) Query: 926 RILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIE 985 +IL+VED + + + G++V A NG+ L N+ LV+MD+ +P +G+ Sbjct: 5 KILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGLL 64 Query: 986 ATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEEL 1034 +R+ LP++ +T + D+ L+ G +D+L KP P EL Sbjct: 65 LARELREE---LSLPLIFLTGRDNEVDKILGLEIGADDYLTKPFNPREL 110 Score = 46.6 bits (109), Expect = 5e-07 Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 12/116 (10%) Query: 772 RVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPN 831 ++LVV+D R +K + E + V E+G E + LA NH ++V +D +P Sbjct: 5 KILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILA-----NHNINLVVMDINLPG 59 Query: 832 MDGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSL--GIDDVLVKPISPSVL 885 +GL +AR L+ + S+ ++ GR+ K L G DD L KP +P L Sbjct: 60 KNGLLLARELR-----EELSLPLIFLTGRDNEVDKILGLEIGADDYLTKPFNPREL 110 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 52.8 bits (125), Expect = 7e-09 Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 3/106 (2%) Query: 929 LVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIEATI 988 +V+D + + L +G+ V AA+G A+ + + LV++D+ MP++DG Sbjct: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 Query: 989 AIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEEL 1034 +R+ + +PI+ +TA DR L+ G +D++ KP P+EL Sbjct: 61 ELRKE---SDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKEL 103 Score = 50.4 bits (119), Expect = 3e-08 Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 8/119 (6%) Query: 775 VVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPNMDG 834 +VDD R +++ L + + V T G EA+ E+D + +V +D MP +DG Sbjct: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPD-----LVVLDVMMPKLDG 55 Query: 835 LEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISPSVLFDSLARVL 893 V + L+ I ++TA G + LG DD +VKP SP L + VL Sbjct: 56 YGVCQELRK---ESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVL 111 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 50.1 bits (118), Expect = 4e-08 Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 5/118 (4%) Query: 772 RVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPN 831 R+L+V+D + ++ L + +VV+ V+ G A ++L D+ +++ DW +P Sbjct: 2 RLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYL---DQGWVNYTLAIFDWMVPG 58 Query: 832 MDGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISPSVLFDSL 889 + GLE+ ++L+ G I ++TA + V+ G DD L+KP + L L Sbjct: 59 LSGLELCQKLR--GQRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAELLARL 114 Score = 48.9 bits (115), Expect = 1e-07 Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 4/115 (3%) Query: 926 RILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNN--AYALVLMDMQMPEMDG 983 R+LLVED + LR + VD +G +A L+ Y L + D +P + G Sbjct: 2 RLLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSG 61 Query: 984 IEATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEELWNKL 1038 +E +R + + LPI+ +TA DR L AG +D+L KP EL +L Sbjct: 62 LELCQKLRG--QRSSLPILMLTAKDQIADRVEGLDAGADDYLIKPFGMAELLARL 114 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 47.4 bits (111), Expect = 3e-07 Identities = 30/113 (26%), Positives = 59/113 (52%), Gaps = 2/113 (1%) Query: 926 RILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLNNNAYALVLMDMQMPEMDGIE 985 R+L+VE+ E L+ G++V VA +GL + L++++ +P M G+E Sbjct: 4 RVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLE 63 Query: 986 ATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEELWNKL 1038 +R+ +++PI+ +TA +R L AG +D++ KP +E + ++ Sbjct: 64 LCRRLREMG--SRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFFARI 114 Score = 47.0 bits (110), Expect = 4e-07 Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 7/115 (6%) Query: 772 RVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPN 831 RVLVV++ + M+ L+ + V G + + P ++ ++ +P Sbjct: 4 RVLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFT-----QAQEFPPDLIIVNGALPG 58 Query: 832 MDGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISPSVLF 886 M GLE+ RRL+ MG + I ++TA E V G DD +VKP + F Sbjct: 59 MSGLELCRRLREMG--SRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFF 111 >SYNE-PCC-01-000608 sll0921 Length = 222 Score = 46.6 bits (109), Expect = 5e-07 Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 31/201 (15%) Query: 768 LEGKRVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDW 827 +E R+ +++D D R ++D L M+ E V G A L + +V ID Sbjct: 1 MEKIRIALIEDEDLIRQGLQDALT-MEPSFEWV--GEAANGRLGLVMMQQTRPDVVIIDI 57 Query: 828 QMPNMDGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISPSVLFD 887 +P+M+G++V ++LK LN Q + I+T +EE + A S G D +K +L + Sbjct: 58 GLPDMNGIDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIE 117 Query: 888 --------------SLARVL------GDPTALAQEMRQSSGIGAEDLALEKLRRIRGARI 927 ++AR++ +P+ + R S G + LE L+ Sbjct: 118 AIQATHGGFAWIDPAIARIVLAHAPGAEPSEPSSPSRTSLSYGLTERELEVLQ------- 170 Query: 928 LLVEDNEINQEVAAELLRDVG 948 L+ D N ++A +L VG Sbjct: 171 -LIVDGCSNADIAEKLYITVG 190 Score = 45.8 bits (107), Expect = 8e-07 Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 2/111 (1%) Query: 926 RILLVEDNE-INQEVAAELLRDVGFN-VDVAANGLIALERLNNNAYALVLMDMQMPEMDG 983 RI L+ED + I Q + L + F V AANG + L + +V++D+ +P+M+G Sbjct: 5 RIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLPDMNG 64 Query: 984 IEATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEEL 1034 I+ T +++ P Q +V +T N + AG + + K E L Sbjct: 65 IDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELL 115 >SYNE-PCC-01-000877 sll1330 Length = 250 Score = 42.4 bits (98), Expect = 9e-06 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 11/120 (9%) Query: 773 VLVVDDNDHARLVMKDLLEQMKFVVETVESGPEALNFLAEADRENHPHSIVFIDWQMPNM 832 + VV+ N H R ++ L+Q ++V+ +A N ++ ID + + Sbjct: 6 ISVVEGNPHLRSLLSWHLQQSGYLVQQCSGFHQARQAF-----NNQLPTLAVIDSDLTDG 60 Query: 833 DGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKAKSLGIDDVLVKPISPSVLFDSLARV 892 DG+E+ R L HQ IFI++A E+ V G DD L KP + + LAR+ Sbjct: 61 DGIELCRWLYQQ---HQSMIFILSAKDTEKDIVHGLKAGADDYLTKPFG---MQEFLARI 114 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.321 0.138 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 109,695 Number of Sequences: 78 Number of extensions: 4710 Number of successful extensions: 196 Number of sequences better than 1.0e-05: 38 Number of HSP's better than 0.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 35 Number of HSP's gapped (non-prelim): 84 length of query: 1261 length of database: 48,235 effective HSP length: 73 effective length of query: 1188 effective length of database: 42,541 effective search space: 50538708 effective search space used: 50538708 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 98 (42.4 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-002879 slr2104 (950 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-002879 slr2104 1822 0.0 SYNE-PCC-01-002873 slr2098 287 1e-79 SYNE-PCC-01-002617 slr1759 262 4e-72 SYNE-PCC-01-001132 sll1672 240 1e-65 SYNE-PCC-01-001306 sll1905 224 9e-61 SYNE-PCC-01-000800 sll1228 219 4e-59 SYNE-PCC-01-000891 sll1353 190 2e-50 SYNE-PCC-01-001280 sll1871 181 9e-48 SYNE-PCC-01-000295 sll0474 172 4e-45 SYNE-PCC-01-001294 sll1888 149 3e-38 SYNE-PCC-01-002778 slr1969 132 5e-33 SYNE-PCC-01-001509 slr0210 124 1e-30 SYNE-PCC-01-001517 slr0222 99 5e-23 SYNE-PCC-01-002788 slr1982 97 2e-22 SYNE-PCC-01-000985 sll1475 89 8e-20 SYNE-PCC-01-001690 slr0473 79 6e-17 SYNE-PCC-01-002086 slr1042 69 7e-14 SYNE-PCC-01-001133 sll1673 69 7e-14 SYNE-PCC-01-002731 slr1909 68 1e-13 SYNE-PCC-01-002635 slr1783 68 1e-13 HINF-KW2-01-000816 HI0837 response regulator (cpxR) 66 6e-13 SYNE-PCC-01-002489 slr1588 62 6e-12 HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (y... 62 1e-11 SYNE-PCC-01-002618 slr1760 61 1e-11 HINF-KW2-01-000863 HI0884 aerobic respiration control protein A... 60 2e-11 SYNE-PCC-01-002672 slr1837 59 7e-11 SYNE-PCC-01-002033 slr0947 59 9e-11 SYNE-PCC-01-000414 sll0649 58 2e-10 SYNE-PCC-01-000608 sll0921 57 3e-10 SYNE-PCC-01-001461 slr0115 56 4e-10 SYNE-PCC-01-001437 slr0081 56 4e-10 HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional reg... 56 6e-10 SYNE-PCC-01-002486 slr1584 55 1e-09 SYNE-PCC-01-000242 sll0396 52 1e-08 SYNE-PCC-01-000523 sll0797 45 1e-06 HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator pr... 44 2e-06 SYNE-PCC-01-001575 slr0312 43 4e-06 SYNE-PCC-01-000518 sll0789 43 5e-06 >SYNE-PCC-01-002879 slr2104 Length = 950 Score = 1822 bits (4719), Expect = 0.0 Identities = 928/950 (97%), Positives = 928/950 (97%) Query: 1 MKSFFLNTFSPLRSTARFWVLVALLTSMELSASQLRDTEQAVAIEESKCTDCVEGRGTGI 60 MKSFFLNTFSPLRSTARFWVLVALLTSMELSASQLRDTEQAVAIEESKCTDCVEGRGTGI Sbjct: 1 MKSFFLNTFSPLRSTARFWVLVALLTSMELSASQLRDTEQAVAIEESKCTDCVEGRGTGI 60 Query: 61 VRGESFAQVETVPTEAKVEQIKPMIERISPHLGLVGFGLAFIGVLWLTYLLKKDRQTKAQ 120 VRGESFAQVETVPTEAKVEQIKPMIERISPHLGLVGFGLAFIGVLWLTYLLKKDRQTKAQ Sbjct: 61 VRGESFAQVETVPTEAKVEQIKPMIERISPHLGLVGFGLAFIGVLWLTYLLKKDRQTKAQ 120 Query: 121 LAFQARRSDVLLELPQYADRLSEVEFLQRGQEFAEELTKSKIAFIHFVNDDEQTIELVAW 180 LAFQARRSDVLLELPQYADRLSEVEFLQRGQEFAEELTKSKIAFIHFVNDDEQTIELVAW Sbjct: 121 LAFQARRSDVLLELPQYADRLSEVEFLQRGQEFAEELTKSKIAFIHFVNDDEQTIELVAW 180 Query: 181 SRATLANYCRVVAASHYPVEEAGIWADALRLRRPVLINDYATHQGKKGLPEGHAYLARLI 240 SRATLANYCRVVAASHYPVEEAGIWADALRLRRPVLINDYATHQGKKGLPEGHAYLARLI Sbjct: 181 SRATLANYCRVVAASHYPVEEAGIWADALRLRRPVLINDYATHQGKKGLPEGHAYLARLI 240 Query: 241 SVPVIDDGKVVMLTGVGNKDVFYTDQDVETVQLISNEIWRIARSRRLVKKLTESENRYRL 300 SVPVIDDGKVVMLTGVGNKDVFYTDQDVETVQLISNEIWRIARSRRLVKKLTESENRYRL Sbjct: 241 SVPVIDDGKVVMLTGVGNKDVFYTDQDVETVQLISNEIWRIARSRRLVKKLTESENRYRL 300 Query: 301 AQAIAKIGNWELDYATNVLFWSPEVFNLFEIAPQDFAGTYEAFLNLIHPGDRELVDEAYQ 360 AQAIAKIGNWELDYATNVLFWSPEVFNLFEIAPQDFAGTYEAFLNLIHPGDRELVDEAYQ Sbjct: 301 AQAIAKIGNWELDYATNVLFWSPEVFNLFEIAPQDFAGTYEAFLNLIHPGDRELVDEAYQ 360 Query: 361 CHLQKYQPYDIVHRLLMPDGRIKYVQEQCNTVFDKNNLPLLSRGTIQDVTELQEAQISLE 420 CHLQKYQPYDIVHRLLMPDGRIKYVQEQCNTVFDKNNLPLLSRGTIQDVTELQEAQISLE Sbjct: 361 CHLQKYQPYDIVHRLLMPDGRIKYVQEQCNTVFDKNNLPLLSRGTIQDVTELQEAQISLE 420 Query: 421 HLNEKLEQRIQERTXXXXXXXXXXXXAKLVAEGATKAKSEFLANMSHEIRTPMNAIIGMS 480 HLNEKLEQRIQERT AKLVAEGATKAKSEFLANMSHEIRTPMNAIIGMS Sbjct: 421 HLNEKLEQRIQERTQELENSQESLLEAKLVAEGATKAKSEFLANMSHEIRTPMNAIIGMS 480 Query: 481 ELVLQTDLTSQQRNYLQKVQYAGEXXXXXXXXXXDFSKMEAGKLELEQKPFSVEEVMGNL 540 ELVLQTDLTSQQRNYLQKVQYAGE DFSKMEAGKLELEQKPFSVEEVMGNL Sbjct: 481 ELVLQTDLTSQQRNYLQKVQYAGELLLGIINNILDFSKMEAGKLELEQKPFSVEEVMGNL 540 Query: 541 HSILGIQAEAKGLTLNFHLDPRIPPILVGDRLRLSQILINLGNNAVKFTNQGEITIRGQL 600 HSILGIQAEAKGLTLNFHLDPRIPPILVGDRLRLSQILINLGNNAVKFTNQGEITIRGQL Sbjct: 541 HSILGIQAEAKGLTLNFHLDPRIPPILVGDRLRLSQILINLGNNAVKFTNQGEITIRGQL 600 Query: 601 LKTENEQTKLQFSVTDTGIGLTPDQQSKLFQWFNQGETSTSRQYGGTGLGLAISKSLTEL 660 LKTENEQTKLQFSVTDTGIGLTPDQQSKLFQWFNQGETSTSRQYGGTGLGLAISKSLTEL Sbjct: 601 LKTENEQTKLQFSVTDTGIGLTPDQQSKLFQWFNQGETSTSRQYGGTGLGLAISKSLTEL 660 Query: 661 MGGDIWLESVVGQGSTFHFTVCLGTASPAVAQDYLVSRVSILEAKPSVTQAITQLEGASI 720 MGGDIWLESVVGQGSTFHFTVCLGTASPAVAQDYLVSRVSILEAKPSVTQAITQLEGASI Sbjct: 661 MGGDIWLESVVGQGSTFHFTVCLGTASPAVAQDYLVSRVSILEAKPSVTQAITQLEGASI 720 Query: 721 LLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYDAT 780 LLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYDAT Sbjct: 721 LLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYDAT 780 Query: 781 RAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLFQTLAHWIPPNSA 840 RAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLFQTLAHWIPPNSA Sbjct: 781 RAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLFQTLAHWIPPNSA 840 Query: 841 REKKNPSSNLKADLSFSSMTGINQQIGMQYIENVELYHRLLVKFGDRYSNFADQFRTEQA 900 REKKNPSSNLKADLSFSSMTGINQQIGMQYIENVELYHRLLVKFGDRYSNFADQFRTEQA Sbjct: 841 REKKNPSSNLKADLSFSSMTGINQQIGMQYIENVELYHRLLVKFGDRYSNFADQFRTEQA 900 Query: 901 SDDPTAATRYAHSIKGAAALLGIENVHHTAQQLEDSCREHESPEMIDRHL 950 SDDPTAATRYAHSIKGAAALLGIENVHHTAQQLEDSCREHESPEMIDRHL Sbjct: 901 SDDPTAATRYAHSIKGAAALLGIENVHHTAQQLEDSCREHESPEMIDRHL 950 >SYNE-PCC-01-002873 slr2098 Length = 1261 Score = 287 bits (734), Expect = 1e-79 Identities = 166/413 (40%), Positives = 243/413 (58%), Gaps = 22/413 (5%) Query: 447 AKLVAEGATKAKSEFLANMSHEIRTPMNAIIGMSELVLQTDLTSQQRNYLQKVQYAGEXX 506 AK +AE A++ K++FLANMSHEIRTPMNA+IGM+ L L+TDLT +QR YL K++++G+ Sbjct: 516 AKELAEEASRIKADFLANMSHEIRTPMNAVIGMTHLALKTDLTPRQREYLHKIRFSGQHL 575 Query: 507 XXXXXXXXDFSKMEAGKLELEQKPFSVEEVMGNLHSILGIQAEAKGLTLNFHLDPRIPPI 566 DFSK+EAGKL +E F +++V+ N+ +++ +A KGL L F +D +P Sbjct: 576 LGVINDILDFSKIEAGKLPMESIDFDLDKVLDNVATLISEKATNKGLELLFDIDRNLPRH 635 Query: 567 LVGDRLRLSQILINLGNNAVKFTNQGEITIRGQLLKTENEQTKLQFSVTDTGIGLTPDQQ 626 +GD LRL QILIN NNAVKFT QG+ITI +L + ++ L +V DTGIG+ P+ Sbjct: 636 FIGDPLRLGQILINYANNAVKFTEQGDITIVVRLQEYRDQDVVLYLAVKDTGIGIKPEHI 695 Query: 627 SKLFQWFNQGETSTSRQYGGTGLGLAISKSLTELMGGDIWLESVVGQGSTFHFTVCLGTA 686 + LF F Q ++ST+R +GGTGLGLAI K + ELMGG++ +ES GQGSTF VCL Sbjct: 696 ANLFNSFQQADSSTTRNFGGTGLGLAICKRIAELMGGEVGVESEYGQGSTFWAKVCL-QK 754 Query: 687 SPAVAQDYLVSRVSILEAKPSVTQAITQLEGASILLVEDNEINREFAHDLLTSKGLRVQV 746 S + ++S+ LEG +L+V+DN+ R DLL V+ Sbjct: 755 SNVIPHRLVLSK---------------DLEGKRVLVVDDNDHARLVMKDLLEQMKFVVET 799 Query: 747 ANNGQEALTLLT-----SNTYDAILMDIQMPMLNGYDATRAIRQQEYHRNLPIIAMTANA 801 +G EAL L ++ + + +D QMP ++G + R ++ + I +TA Sbjct: 800 VESGPEALNFLAEADRENHPHSIVFIDWQMPNMDGLEVARRLKAMGLNHQPSIFIVTAYG 859 Query: 802 MAGDQEKALDAGMNDHLTKPIKPDLLFQTLAHWI-PPNSAREKKNPSSNLKAD 853 KA G++D L KPI P +LF +LA + P + ++ SS + A+ Sbjct: 860 REELFVKAKSLGIDDVLVKPISPSVLFDSLARVLGDPTALAQEMRQSSGIGAE 912 Score = 171 bits (432), Expect = 1e-44 Identities = 105/256 (41%), Positives = 149/256 (58%), Gaps = 7/256 (2%) Query: 689 AVAQDYLVSRVSILEAKPSVTQAITQLEGASILLVEDNEINREFAHDLLTSKGLRVQVAN 748 A+AQ+ S S + A+ + + ++ GA ILLVEDNEIN+E A +LL G V VA Sbjct: 898 ALAQEMRQS--SGIGAEDLALEKLRRIRGARILLVEDNEINQEVAAELLRDVGFNVDVAA 955 Query: 749 NGQEALTLLTSNTYDAILMDIQMPMLNGYDATRAIRQQEYHRNLPIIAMTANAMAGDQEK 808 NG AL L +N Y +LMD+QMP ++G +AT AIRQ + LPI+AMTAN M GD+E+ Sbjct: 956 NGLIALERLNNNAYALVLMDMQMPEMDGIEATIAIRQNPRYAQLPIVAMTANVMQGDRER 1015 Query: 809 ALDAGMNDHLTKPIKPDLLFQTLAHWIPPNS--AREKKNPSSNLKAD--LSFSSMTGINQ 864 L AGMNDHL KPI+P+ L+ L HWIP +S A E S+ +D +S + G+N Sbjct: 1016 CLQAGMNDHLGKPIEPEELWNKLLHWIPVDSPLAPETIEESAINTSDPEISIPHIPGLNS 1075 Query: 865 QIGM-QYIENVELYHRLLVKFGDRYSNFADQFRTEQASDDPTAATRYAHSIKGAAALLGI 923 G+ + + LY ++L KF S+F + D A R AH++KG A +G Sbjct: 1076 DDGLRRVLGKKSLYLKMLHKFVASQSSFLPEITQALGEKDYGFAERLAHTLKGVAGNIGA 1135 Query: 924 ENVHHTAQQLEDSCRE 939 + + A +LE + +E Sbjct: 1136 QELQQEAAELEKAIKE 1151 >SYNE-PCC-01-002617 slr1759 Length = 1462 Score = 262 bits (669), Expect = 4e-72 Identities = 158/442 (35%), Positives = 246/442 (55%), Gaps = 35/442 (7%) Query: 408 DVTELQEA---QISLEHLNEKLEQRIQERTXXXXXXXXXXXXAKLVAEGATKAKSEFLAN 464 D EL EA Q+ + L ++ +ER A AE A +AK EFLA Sbjct: 725 DEIELLEAIAEQMGIALAQAALLEKERERRRELAQKNLELEKATWAAEAANRAKGEFLAM 784 Query: 465 MSHEIRTPMNAIIGMSELVLQTDLTSQQRNYLQKVQYAGEXXXXXXXXXXDFSKMEAGKL 524 MSHEIRTPMN +IGM+EL++ TDL QQ +Y+Q ++ +GE DFSK+EA KL Sbjct: 785 MSHEIRTPMNGVIGMTELLIMTDLNLQQLDYVQTIRQSGETLLTIINDILDFSKIEADKL 844 Query: 525 ELEQKPFSVEEVMGNLHSILGIQAEAKGLTLNFHLDPRIPPILVGDRLRLSQILINLGNN 584 LE + F + ++ + + G A AK L L + +DP+ P ++GD++RL QIL NL N Sbjct: 845 VLETQAFELRPLIETVLEMFGPIARAKHLELTYGIDPQTPARILGDQVRLRQILSNLIGN 904 Query: 585 AVKFTNQGEI--TIRGQ----------LLKTENEQTKLQFSVTDTGIGLTPDQQSKLFQW 632 A+KFT +GE+ T++G+ +L + ++ F++ DTGIG+ D+Q +LF+ Sbjct: 905 ALKFTEKGEVVLTVKGEPFDPAESYHTILNLPHPSHRICFNLRDTGIGIPLDRQDRLFKS 964 Query: 633 FNQGETSTSRQYGGTGLGLAISKSLTELMGGDIWLESVVGQGSTFHFTVCLGTASPAVAQ 692 F+Q ++ST+R+YGGTGLGL IS+ LT++MGG + + S G GS F F + +PA+A+ Sbjct: 965 FSQVDSSTTRKYGGTGLGLVISQRLTQMMGGVLTVTSEPGVGSNFRFCILTTAQAPALAE 1024 Query: 693 DYLVSRVSILEAKPSVTQAITQLEGASILLVEDNEINREFAHDLLTSKGLRVQVANNGQE 752 ++ Q++G +L+V+DNE NR D + GL +G+ Sbjct: 1025 ----------------ADSVQQMKGKQVLIVDDNETNRRILQDQCQAWGLVCHCFTSGES 1068 Query: 753 ALT-LLTSNTYDAILMDIQMPMLNGYDATRAIRQQEYHRNLPIIAMTANAMAGDQEKALD 811 AL DA ++D+QMP ++G +RQ ++LPII +++ +AG E ++ Sbjct: 1069 ALDWFARCPDLDAAILDLQMPNMDGITLAHHLRQFAQGKDLPIILLSSGLVAGADELSV- 1127 Query: 812 AGMNDHLTKPIKPDLLFQTLAH 833 L KP++ L+F +L + Sbjct: 1128 --FQTVLNKPVRQSLIFDSLVN 1147 Score = 112 bits (281), Expect = 4e-27 Identities = 86/297 (28%), Positives = 139/297 (46%), Gaps = 28/297 (9%) Query: 677 FHFTVCLGTASPAVAQDYLVSRVSILEAKPSVTQAITQLEGASILLVEDNEINREFAHDL 736 F ++ L +P Q L V + P+ A + ILL EDN +N++ AH + Sbjct: 1149 FQGSIGLADYAPQFDQLDLPEFVPDGDGLPTEDNATSLQPALQILLAEDNLVNQKVAHQM 1208 Query: 737 LTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYDATRAIRQQ-EYHRNLPII 795 L + G V +ANNGQE + L YD +LMD+QMP+++G A R IRQ R I+ Sbjct: 1209 LNNLGYPVAIANNGQEVIDALEKKFYDLVLMDMQMPVMDGITACRHIRQTLPLERQPRIV 1268 Query: 796 AMTANAMAGDQEKALDAGMNDHLTKPIKPDLL---FQTLAHWIPPNSARE---------- 842 AMTANAM GD+++ LDAGM+ +++KPI + L Q + I ARE Sbjct: 1269 AMTANAMPGDRQECLDAGMDGYISKPISINQLRKVLQDTSALITSPQAREDIVTLGDKIT 1328 Query: 843 ------KKNPSSNLKADLSFSSMTGINQQIGMQYIENVELYHRLLVKFGDRYSNFADQFR 896 P+ ++ L +++ + + ++ L+ ++ + ++ Sbjct: 1329 VVEEQTMVKPTDVTESPLDPTAIAFLRDDL---CGGDLTLFGEMVACYCQESQKLIEELV 1385 Query: 897 TEQASDDPTAATRYAHSIKGAAALLGIENVHHTAQQLEDSCRE-----HESPEMIDR 948 DD R AHS+K ++A LG + + QQLE + P+++DR Sbjct: 1386 QGLEVDDFAVIRRTAHSLKSSSASLGAQQLSTFCQQLEKNAGSGNLGLGSPPQLVDR 1442 >SYNE-PCC-01-001132 sll1672 Length = 834 Score = 240 bits (613), Expect = 1e-65 Identities = 156/462 (33%), Positives = 258/462 (55%), Gaps = 42/462 (9%) Query: 390 NTVFDKNNLPLLSRGTIQDV---TELQEAQ---ISLEHLNEKLEQRIQERTXXXXXXXXX 443 N +F N + + +Q++ EL+ AQ I +E+ NE L++++ Sbjct: 304 NQLFTTNQILIEQNQKLQELYQQRELERAQREKILIEY-NESLQKQVD------------ 350 Query: 444 XXXAKLVAEGATKAKSEFLANMSHEIRTPMNAIIGMSELVLQT-DLTSQQRNYLQKVQYA 502 AK +AE KAKS F+ANMSHE+R+P+NAIIG S+L+L+T +L +Q +Q + Sbjct: 351 LVRAKEIAESEAKAKSTFVANMSHELRSPLNAIIGFSQLMLRTKNLPMEQYENAGIIQRS 410 Query: 503 GEXXXXXXXXXXDFSKMEAGKLELEQKPFSVEEVMGNLHSILGIQAEAKGLTLNFHLDPR 562 GE DFSK+EAGK L + F + ++ +L +L ++A +G+ L F D Sbjct: 411 GEYLLNLINNILDFSKIEAGKTHLNRHNFDLYLLLDDLEDMLHLKAANEGIELIFIRDHD 470 Query: 563 IPPILVGDRLRLSQILINLGNNAVKFTNQGEITIRGQLLKTENEQTK------------- 609 +P + GD ++L QIL+NL +NA+KFT +GE+ + E ++ Sbjct: 471 LPRYVYGDEIKLRQILLNLLSNAIKFTTEGEVVLTSNFRNAEQQEVINPETSTEPKNKYW 530 Query: 610 LQFSVTDTGIGLTPDQQSKLFQWFNQGETSTSRQYGGTGLGLAISKSLTELMGGDIWLES 669 L F++ DTG G++ + S LF+ F+Q E+ + Q G TGLGLAI++ +LMGGDI + S Sbjct: 531 LDFTIKDTGKGISEVELSHLFEAFSQTESGRNAQEG-TGLGLAITRQFIKLMGGDINVSS 589 Query: 670 VVGQGSTFHFTVCLGTASPAVAQDYLVSRVSILEAKPSVTQAITQLEGASILLVEDNEIN 729 VV QG+TF F++ + ++++ ++ +L P Q + + IL+V+D +N Sbjct: 590 VVDQGTTFSFSILVDLGEITLSREPNSAK-KVLALTPG--QPVYK-----ILVVDDKSVN 641 Query: 730 REFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYDATRAIRQQEYH 789 R+ LL G ++ A+NGQEA+ L S I MD++MP+++GY+AT+ I+ Q Sbjct: 642 RQLLIKLLAPFGFEIEEASNGQEAIALWESWEPHLIFMDMRMPVMDGYEATKYIKGQVKG 701 Query: 790 RNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLFQTL 831 ++A+TA+ + ++ L AG +D L KP + + +F +L Sbjct: 702 NATAVVALTASVLEEEKAIVLSAGCDDFLRKPFRENTIFDSL 743 >SYNE-PCC-01-001306 sll1905 Length = 1014 Score = 224 bits (571), Expect = 9e-61 Identities = 174/522 (33%), Positives = 269/522 (51%), Gaps = 68/522 (13%) Query: 393 FDKNNLPLLSRGTIQ-------DVTELQEAQISLEHLNEKLEQRIQERTXXXXXXXXXXX 445 F+++ +P++ + Q D+++ ++ ++ ++ + ++E+R++++ Sbjct: 253 FERDYVPIMLGDSSQGHFWLYRDISQRKQVEM-IQGQSLEMERRMRQQLAEQNQELVAAT 311 Query: 446 XAKLVAEGATKAKSEFLANMSHEIRTPMNAIIGMSELVLQTDLTSQQRNYLQKVQYAGEX 505 A AE A ++KSEFLA MSHEIRTPMNAIIGM+ L+L TDLT+QQ+ + Q ++ +GE Sbjct: 312 TA---AEAANRSKSEFLATMSHEIRTPMNAIIGMTGLLLDTDLTTQQKYFAQTIRNSGET 368 Query: 506 XXXXXXXXXDFSKMEAGKLELEQKPFSVEEVMGNLHSILGIQAEAKGLTLNFHLDPRIPP 565 DFSK+EAGKL+LE PF + + + ++ A K LTL IPP Sbjct: 369 LLTLINDILDFSKIEAGKLDLEVYPFDLGQCLEEALDVVVPSARQKSLTLIRRFLTPIPP 428 Query: 566 ILVGDRLRLSQILINLGNNAVKFTNQGEITIRGQLLKTENEQTKLQ--FSVTDTGIGLTP 623 L GD RL QIL+NL +NAVKFT G++ + +++ + + + Q F+V DTGIG+ P Sbjct: 429 NLQGDVTRLRQILVNLLSNAVKFTEAGQVKVTVEVVDHDAAKGEYQICFAVQDTGIGIAP 488 Query: 624 DQQSKLFQWFNQGETSTSRQYGGTGLGLAISKSLTELMGGDIWLES---VVG-------- 672 +QQ LFQ F+QG +S +R++GGTGLGLAI LT LMGG IW ES VVG Sbjct: 489 NQQQALFQAFSQGNSSITRRFGGTGLGLAICVRLTALMGGTIWAESNGCVVGNPPELWQI 548 Query: 673 -----QGSTFHFTVCLGTASPAVAQDYLVSRVSILEAKPSVTQAITQLEGASILLVEDNE 727 +GSTF+FTV L T P+ A R S+ G S+L+ + +E Sbjct: 549 GQPTIEGSTFYFTVNL-TVLPSCAYSVHNLRHSL-------------FIGRSVLVADYDE 594 Query: 728 INREFAHDLLTSKGLRVQ------VANNGQEALTLLTSNTYDAILMDIQMPMLNG----- 776 +LL S L+ + A G++ + LT Y A+++ P G Sbjct: 595 GRGTRMRNLLASWRLQAEQITFSSPAKLGEDLKSRLTQKNYGALILHCPYPEGRGKQFTD 654 Query: 777 YDATRAIRQQEYHRNLPIIAMTANAMA-GDQEKALDAGMNDHLTKPIKPDLLFQTLAHWI 835 +D + +++P++ T ++ G++ + + PI PD L TL + Sbjct: 655 FDLGKITTWAPTEQDIPVLVATDIYLSPGERYSGDKPPVQAWIKSPINPDELENTLVDVL 714 Query: 836 ----PPN--SAREKKNP-----SSNLKADLSFSSMTGINQQI 866 PP S P SSNL L+ ++ INQQ+ Sbjct: 715 GQTEPPTLVSTEAISGPLFPYSSSNLTILLAEDNL--INQQV 754 Score = 108 bits (270), Expect = 8e-26 Identities = 82/252 (32%), Positives = 128/252 (50%), Gaps = 21/252 (8%) Query: 719 SILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYD 778 +ILL EDN IN++ A LL G V V NNGQEAL+ L YD +LMD++MP ++G Sbjct: 741 TILLAEDNLINQQVAKLLLKKLGYPVDVVNNGQEALSALAKGDYDVVLMDVEMPEMDGLT 800 Query: 779 ATRAIRQQEYHRNLP-IIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLFQTL------ 831 AT IR+ + P IIA+TA +M GD+E+ L +GMND+++KPI+ + L Q L Sbjct: 801 ATEHIRRSQGRSERPWIIAVTAYSMEGDRERCLASGMNDYVSKPIRLEALQQALQVAATA 860 Query: 832 ---------AHWIPPNSAREKKNPSSNLKADLSFSSMTGINQQIGMQY----IENVELYH 878 A ++ K +PSS D + +++ I+Q I EN +L Sbjct: 861 LQSTSQDRMATVSCVSAFEAKPSPSSPCPEDPAGTTLPPIDQDIICSLRDLDRENGQLIL 920 Query: 879 RLLVK-FGDRYSNFADQFRTEQASDDPTAATRYAHSIKGAAALLGIENVHHTAQQLEDSC 937 R ++ + + + A+ D + AH++ ++A LG + A+ LE+ Sbjct: 921 REIIDIYCQTAPELLQRIKLAIANQDWGNLSSAAHTLGSSSANLGAVLLAQQAKTLENLT 980 Query: 938 REHESPEMIDRH 949 R+ +S M H Sbjct: 981 RQRDSRAMDPGH 992 Score = 63.9 bits (154), Expect = 2e-12 Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 1/131 (0%) Query: 704 AKPSVTQAITQLEGASILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYD 763 ++P A + E IL+V+D + N +LL +G +G EAL +T D Sbjct: 4 SQPHPPIATFEPESFLILVVDDVKENIYVISELLEGEGYSTTFVTSGPEALQRVTQAQPD 63 Query: 764 AILMDIQMPMLNGYDATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIK 823 IL+D+ MP ++G + ++Q R++P+I +TA+ D +A G D++TKP Sbjct: 64 LILLDLMMPGMDGLEVCDRLKQDPQTRDIPVIFLTASNEKQDLLQAFAKGAVDYVTKPFS 123 Query: 824 -PDLLFQTLAH 833 P+LL + H Sbjct: 124 PPELLARVKTH 134 >SYNE-PCC-01-000800 sll1228 Length = 633 Score = 219 bits (557), Expect = 4e-59 Identities = 145/412 (35%), Positives = 220/412 (53%), Gaps = 19/412 (4%) Query: 447 AKLVAEGATKAKSEFLANMSHEIRTPMNAIIGMSELVLQTDLTSQQRNYLQKVQYAGEXX 506 AK A+ A +AK+EFLA++SHE+RTP+NAIIG S+L+ + + R L + +GE Sbjct: 152 AKEAADAANRAKTEFLASISHELRTPLNAIIGFSQLLHRDPSLAPHRPTLDIINRSGEHL 211 Query: 507 XXXXXXXXDFSKMEAGKLELEQKPFSVEEVMGNLHSILGIQAEAKGLTLNFHLDPRIPPI 566 + SK+EAG+ L +K ++ NL ++ ++A+ K L L P +P Sbjct: 212 LELINDILEMSKIEAGRTTLNEKIIDCHRLLDNLQALFQLRAQEKQLLLKVERSPEVPEW 271 Query: 567 LVGDRLRLSQILINLGNNAVKFTNQGEITIRGQLL---KTENEQTK---LQFSVTDTGIG 620 + D +L Q+LINL NA+KFT QG +T++ + L +T+ Q L F V+DTG G Sbjct: 272 IKTDGGKLRQVLINLLANAIKFTAQGGVTLKVKCLTAPQTDEGQGASIWLHFLVSDTGPG 331 Query: 621 LTPDQQSKLFQWFNQGETSTSRQYGGTGLGLAISKSLTELMGGDIWLESVVGQGSTFHFT 680 + + +LF F Q ET + G GLGL IS+ +LMGG I + S V QGS F F Sbjct: 332 IAAHEMDELFVPFAQTETGL-KSCQGNGLGLPISQKFVQLMGGQIQVRSKVDQGSAFFFA 390 Query: 681 VCLGT-ASPAVAQDYLVSRVSILEAKPSVTQAITQLEGASILLVEDNEINREFAHDLLTS 739 + + A+P + +VT +L+V+D +R LLTS Sbjct: 391 IPVQVMAAPKPTPE-----------TSAVTLPPLDQYNQKVLVVDDRPESRLLLRQLLTS 439 Query: 740 KGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYDATRAIRQQEYHRNLPIIAMTA 799 G VQ A NG+ A+ L S ILMD+QMP+L+G T+ I+ ++ IIA+TA Sbjct: 440 LGFVVQEAENGEMAIALWESWHPQVILMDMQMPVLDGRSTTQKIKASPQGQHTIIIALTA 499 Query: 800 NAMAGDQEKALDAGMNDHLTKPIKPDLLFQTLAHWIPPNSAREKKNPSSNLK 851 +A G++ + L AG +D L+KP +P+ L LA + + + P+S L+ Sbjct: 500 SAFEGERAEILSAGCDDFLSKPFRPEELIALLAKHLAVALPSQGQPPASPLR 551 >SYNE-PCC-01-000891 sll1353 Length = 998 Score = 190 bits (482), Expect = 2e-50 Identities = 109/265 (41%), Positives = 158/265 (59%), Gaps = 11/265 (4%) Query: 422 LNEKLEQRIQERTXXXXXXXXXXXXAKLVAEGATKAKSEFLANMSHEIRTPMNAIIGMSE 481 +N++L I+ER AK AE A + KSEFLAN+SHEIRTPMNAI+G + Sbjct: 568 INKQLAGEIEERQRIEIKLRE----AKESAELANRVKSEFLANISHEIRTPMNAILGFCD 623 Query: 482 LVLQTDLT-SQQRNYLQKVQYAGEXXXXXXXXXXDFSKMEAGKLELEQKPFSVEEVMGNL 540 L+LQ DL+ SQ + YL + + + D SK+EAGKL + +P + ++ + Sbjct: 624 LLLQKDLSLSQTKKYLNAIGSSSKILLALIDDILDISKIEAGKLVIHLEPVDLRVIIREI 683 Query: 541 HSILGIQAEAKGLTLNFHLDPRIPPILVGDRLRLSQILINLGNNAVKFTNQGEITI---- 596 I +AE+K L L +D + + D +RL QIL NL NA+KFT +G++ I Sbjct: 684 KQIFDYKAESKSLLLTIQIDETLNQAIYFDAVRLRQILFNLVGNALKFTEEGQVFIYIGV 743 Query: 597 RGQLLKTENEQTKLQFSVTDTGIGLTPDQQSKLFQWFNQGETSTSRQYGGTGLGLAISKS 656 G ++++ L VTDTGIG+ P+ Q+K+F F Q + ++R+YGGTGLGL I++ Sbjct: 744 EGIQVRSQGTYISLAIEVTDTGIGIAPEDQAKIFDVFTQSQGQSTRKYGGTGLGLTITRR 803 Query: 657 LTELMGGDIWLESVVGQGSTF--HF 679 LT L+GG+I L S +G+GSTF HF Sbjct: 804 LTALLGGEISLSSRLGEGSTFILHF 828 >SYNE-PCC-01-001280 sll1871 Length = 674 Score = 181 bits (459), Expect = 9e-48 Identities = 110/270 (40%), Positives = 160/270 (59%), Gaps = 5/270 (1%) Query: 411 ELQEAQISLEHLNEKLEQRIQERTXXXXXXXXXXXXAKLVAEGATKAKSEFLANMSHEIR 470 EL+ AQ L N LE+++Q+RT A AE A KS FLANMSHE+R Sbjct: 391 ELELAQKQLAVANSCLEEKVQQRTEELENTVKALELASSEAEAANATKSIFLANMSHELR 450 Query: 471 TPMNAIIGMSELVLQT--DLTSQQR-NYLQKVQYAGEXXXXXXXXXXDFSKMEAGKLELE 527 TP+NAIIG SE++++ DL S++ L K+ +G+ D SK+EAGK+EL Sbjct: 451 TPLNAIIGYSEMLIEEAEDLDSEELVPDLDKILRSGKSLLALINDLLDISKIEAGKMELY 510 Query: 528 QKPFSVEEVMGNLHSILGIQAEAKGLTLNFHLDPRIPPILVGDRLRLSQILINLGNNAVK 587 + F+++E++ + + + L + + GD ++L Q ++NL +NA K Sbjct: 511 LETFNLKELIAGILDTISPLLKNNNNKLEVEISLESEEVY-GDLIKLRQGILNLLSNASK 569 Query: 588 FTNQGEITIRGQLLKTENEQTKLQFSVTDTGIGLTPDQQSKLFQWFNQGETSTSRQYGGT 647 FT G I+ + K + E+ L F V DTGIGLT +Q SKLFQ F Q ++ST+R+YGGT Sbjct: 570 FTKDGIISFIVEEFKVD-EKDWLSFQVKDTGIGLTEEQMSKLFQPFTQADSSTTRKYGGT 628 Query: 648 GLGLAISKSLTELMGGDIWLESVVGQGSTF 677 GLGLAI++ ++MGGDI+L S +G GS+F Sbjct: 629 GLGLAITRKFCQMMGGDIYLTSEIGVGSSF 658 >SYNE-PCC-01-000295 sll0474 Length = 806 Score = 172 bits (436), Expect = 4e-45 Identities = 137/442 (30%), Positives = 219/442 (49%), Gaps = 58/442 (13%) Query: 266 QDVETVQLISNEIWRIARSRRLVKKLTESENRYRLAQAIAKIGNWELDYATNVLFWSPEV 325 Q +Q+ E IA +K E RY LA ++ WE + P + Sbjct: 258 QTFNQLQIYQREALEIAE-----RKYVEIAQRYELASQATRVWVWECQPKIHYFEVDPNL 312 Query: 326 FNL--FEIAPQDFAGTYEAFLNLIHPGDRELVDEAYQCHLQK-YQPYDIVHRLLMPDGRI 382 FE + G + IH GDR + +A + L+ RL +G I Sbjct: 313 ITWLGFEQPLEPADGDF-----FIHLGDRPMFWQAIEQSLEDPTMELSTELRLEAANGEI 367 Query: 383 KYVQEQCNTVFDKNNLPLLSRGTIQDVTELQEAQISLEHLNEKLEQRIQERTXXXXXXXX 442 + + ++ + GTI D+TE+++A+ L+ N+ L + Sbjct: 368 YHCLLRGQIHQEQGEAFVKIIGTIADITEIKKAEEQLKLSNKILAK-------------- 413 Query: 443 XXXXAKLVAEGATKAKSEFLANMSHEIRTPMNAIIGMSELV---LQTDLTSQQRNYLQKV 499 AT+ K EFLANMSHE+RTP+N+I+GM E + + L +Q L+ V Sbjct: 414 -----------ATQLKDEFLANMSHELRTPLNSILGMIETLQNQVYGPLNGKQVQSLEIV 462 Query: 500 QYAGEXXXXXXXXXXDFSKMEAGKLELEQKPFSVEEVMGNLHSILGIQAEA--KGLTLNF 557 + +G D SK+EAG+++L+ P SV ++ HS+ +Q A K + L+ Sbjct: 463 ENSGRHLLSLINDILDLSKIEAGRMDLDLNPTSVSALVN--HSLTFVQQFAIQKQINLSS 520 Query: 558 HLDPRIPPILVGDRLRLSQILINLGNNAVKFTNQG-EITIRGQLLKT---ENEQT--KLQ 611 + P +P +LV D+ RL Q+LINL NNA+KFT +G ++ ++ L+K EN Q+ +L Sbjct: 521 EIIPNLPDVLV-DKRRLCQVLINLLNNAIKFTPEGGKVVVQADLIKEQGKENSQSPPQLS 579 Query: 612 FSVTDTGIGLTPDQQSKLFQWFNQGETSTSRQYGGTGLGLAISKSLTELMGGDIWLESVV 671 F+V DTGIG+ D+ + +F+ F Q +++ +R+Y GTGLGL++ K + EL GG + + S + Sbjct: 580 FTVFDTGIGIEADRLNNIFEPFVQIDSALNRRYDGTGLGLSLVKKIVELHGGSVTVTSKL 639 Query: 672 GQGSTFHFTVCLGTASPAVAQD 693 +GS F T+ P V QD Sbjct: 640 NEGSRFKITI------PCVFQD 655 >SYNE-PCC-01-001294 sll1888 Length = 432 Score = 149 bits (377), Expect = 3e-38 Identities = 98/272 (36%), Positives = 150/272 (55%), Gaps = 12/272 (4%) Query: 424 EKLEQRIQERTXXXXXXXXXX---XXAKLVAEGATKAKSEFLANMSHEIRTPMNAIIGMS 480 E L Q + E+T A AE A++ KSEFLA+ +HE+RTP+N IIG Sbjct: 157 EALLQELAEQTGTAIAHATLYQELTQATKAAEEASRLKSEFLASTTHELRTPLNGIIGFL 216 Query: 481 ELVLQ--TDLTSQQRNYLQKVQYAGEXXXXXXXXXXDFSKMEAGKLELEQKPFSVEEVMG 538 L+L D +++ ++++ + D +K+EAG++ +E + EV+ Sbjct: 217 RLILDDMADSEAEKHEFVEEAYQSALLLLNLINDILDLAKIEAGRVGIELEVVDFSEVLQ 276 Query: 539 NLHSILGIQAEAKGLTLNFHLDPRIPPILVGDRLRLSQILINLGNNAVKFTNQGEITI-- 596 + QA+ KGL+ N + P ++ G++ L Q+++N+ NA+KFT++G IT+ Sbjct: 277 ATENFALPQAQNKGLSFNLTAPNQGPLLVYGNQRWLLQVMLNIVGNAIKFTHEGGITVAV 336 Query: 597 ----RGQLLKTENEQTKLQFSVTDTGIGLTPDQQSKLFQWFNQGETSTSRQYGGTGLGLA 652 R L + + L+ SV DTGIG++ +QQSKLF+ F Q + S S+ YGGTGLGL Sbjct: 337 EVMPRTVLWEGVQKPGLLKVSVGDTGIGVSLEQQSKLFKKFVQIDGSHSKAYGGTGLGLV 396 Query: 653 ISKSLTELMGGDIWLESV-VGQGSTFHFTVCL 683 IS+ L E MGG + S+ G GST FTV L Sbjct: 397 ISQKLVETMGGKVAFFSMGEGLGSTVTFTVLL 428 >SYNE-PCC-01-002778 slr1969 Length = 750 Score = 132 bits (332), Expect = 5e-33 Identities = 115/416 (27%), Positives = 196/416 (47%), Gaps = 44/416 (10%) Query: 427 EQRIQERTXXXXXXXXXXXXAKLVAEGATKAKSEFLANMSHEIRTPMNAIIGMSELVLQ- 485 E+R+ ERT + A+ A KS+F+ N+SHE+RTP+ +IIG+S +L+ Sbjct: 355 EKRVIERTKELRDTL-------MAAQAANLLKSQFINNISHELRTPLTSIIGLSATLLRW 407 Query: 486 -----TDLTSQQRNYLQKVQYAGEXXXXXXXXXXDFSKMEAGKLELEQKPFSVEEVMGN- 539 + ++Q+ YL +Q G+ S++E+G+ L + FS+ + Sbjct: 408 FDHPASLPPAKQQYYLLNIQENGKKLLDQINSIIQLSQLESGQTALNCQSFSLHTLAQTV 467 Query: 540 LHSILGIQAEAKGLTLNFHLDPRI---PPILVGDRLRLSQILINLGNNAVKFTNQGEITI 596 +HS+LG+ + + +N LD +I D+ RL QIL L NNA+KFT E T+ Sbjct: 468 IHSLLGVAIKQQ---INLELDYQINVGQDQFCADQERLDQILTQLLNNALKFT-PAEGTV 523 Query: 597 RGQLLKTENEQTKLQFSVTDTGIGLTPDQQSKLFQWFNQGETSTSRQYGGTGLGLAISKS 656 +L+ E + F V DTGIG+ Q LF+ F S + Y G+GLA++K Sbjct: 524 ---ILRIWKESNQAIFQVEDTGIGINEQQLPVLFEAFKVAGDSYTSFYETGGVGLALTKQ 580 Query: 657 LTELMGGDIWLESVVGQGSTFHFTVCLGTASPAV---AQDYLVSRVSILEAKPSVTQAIT 713 L EL GG I +ES GQG+ F + P QD L + + Sbjct: 581 LVELHGGYIEVESSPGQGTIFTTVIPQQNFPPTTKGQVQDKLDAAMPF------------ 628 Query: 714 QLEGASILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPM 773 +S++++E +E +LLT +V + AL + I++D Sbjct: 629 ---NSSVIVIEQDEEIATLICELLTVANYQVIWLIDTTNALQQVELLQPGLIIVD--GDF 683 Query: 774 LNGYDATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLFQ 829 ++ + TR I++ + + ++ + + + + G++D+L KP++P+LL Q Sbjct: 684 VDVTEVTRGIKKSRRISKVTVFLLSESLSSAEWQALSQKGIDDYLLKPLQPELLLQ 739 >SYNE-PCC-01-001509 slr0210 Length = 417 Score = 124 bits (311), Expect = 1e-30 Identities = 87/228 (38%), Positives = 122/228 (53%), Gaps = 9/228 (3%) Query: 462 LANMSHEIRTPMNAIIGMSELV---LQTDLTSQQRNYLQKVQYAGEXXXXXXXXXXDFSK 518 L+++ HE RTP+ AIIG + ++ L L +Q Y+Q + E D SK Sbjct: 190 LSHIHHEFRTPLTAIIGFARMLRDELYGKLNPKQHQYVQGTLNSAEHLLSLVNDFLDLSK 249 Query: 519 MEAGKLELEQKPFSVEEVMGNLHSILGIQAEAKGLTLNFHLDPRIPPILVGDRLRLSQIL 578 ++A EL + +VE++ + S++ +A+ K L LN +D + V D+ R QIL Sbjct: 250 IDARCEELFYEQVAVEDLCLAVISMVQTKAKEKQLALNLTIDDGVDFCYV-DQRRWKQIL 308 Query: 579 INLGNNAVKFTNQGEITIRGQLLKTENEQTKLQFSVTDTGIGLTPDQQSKLFQWFNQGET 638 INL +N VKFT +G +T L + L FSV DTGIG+ P+ Q LFQ F Q Sbjct: 309 INLLSNGVKFTPKGSVT-----LAVKATDKALIFSVIDTGIGIDPEDQRDLFQPFKQISH 363 Query: 639 STSRQYGGTGLGLAISKSLTELMGGDIWLESVVGQGSTFHFTVCLGTA 686 S GTGLGLA+S+ L +L GGDI L S G GS F + L T+ Sbjct: 364 PPSFAEKGTGLGLALSRRLAQLHGGDIQLTSTPGVGSCFSAILPLKTS 411 >SYNE-PCC-01-001517 slr0222 Length = 1178 Score = 99.4 bits (246), Expect = 5e-23 Identities = 87/285 (30%), Positives = 136/285 (47%), Gaps = 39/285 (13%) Query: 407 QDVTELQEAQISLEHLNEKLEQRIQERTXXXXXXXXXXXXAKLVAEGATKAKSEFLANMS 466 QD+T+++ A+I E L ++ER +AKS+F+ +S Sbjct: 914 QDITDIKRAEI------ETLRSLVKEREL-------------------NEAKSQFVDIVS 948 Query: 467 HEIRTPMNAIIGMSELV---LQTDLTSQQRNYLQKVQYAGEXXXXXXXXXXDFSKMEAGK 523 HE RTP+ +IIG EL+ T +++ Y+ +Q + + S+ +A K Sbjct: 949 HEFRTPLTSIIGFGELLSKYFDRLSTEKKQQYINNIQNSSQRLKQLIDDVLSISRYDANK 1008 Query: 524 LELEQKPFSVEEVMGNL--HSILGIQAEAKGLTLNFHLDPRIPPILVGDRLRLSQILINL 581 +E+E ++ + +L + G+ +E LN+HL P LV RL L IL N+ Sbjct: 1009 IEIELGNINLRNLANDLIENFSCGLGSE-HNFELNYHLKPD-EHSLVDVRL-LRHILENI 1065 Query: 582 GNNAVKFTNQGEITIRGQLLKTENEQTKLQFSVTDTGIGLTPDQQSKLFQWFNQGETSTS 641 +NA+K++ G TI + K E L F V D GIG+ Q KLF+ F++ S Sbjct: 1066 LSNAIKYSAPGS-TITLDISKDEEH---LLFQVRDEGIGIPLQDQEKLFEAFHR--ASNV 1119 Query: 642 RQYGGTGLGLAISKSLTELMGGDIWLESVVGQGSTFHFTVCLGTA 686 GTGLGL+I K E GG I + S+ G+G+T + L A Sbjct: 1120 GDIPGTGLGLSIVKRYVEFQGGTIEVISMPGKGTTMVIKLPLNPA 1164 >SYNE-PCC-01-002788 slr1982 Length = 123 Score = 97.4 bits (241), Expect = 2e-22 Identities = 49/114 (42%), Positives = 78/114 (68%) Query: 718 ASILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGY 777 A +LLVEDNE+NR+ L KG V +A +G++A+T+ S + ILMD+ +P+++G+ Sbjct: 5 AKVLLVEDNEMNRDMLSRRLIRKGYEVVIAVDGEQAVTMAISESPQLILMDMSLPIIDGW 64 Query: 778 DATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLFQTL 831 AT+ I+ ++PIIA+TA+AMA D+E+A+ AG +D+ TKPI+ L Q + Sbjct: 65 TATKQIKGHPDGAHIPIIALTAHAMASDRERAIAAGCDDYDTKPIEIKRLLQKM 118 >SYNE-PCC-01-000985 sll1475 Length = 297 Score = 88.6 bits (218), Expect = 8e-20 Identities = 69/235 (29%), Positives = 122/235 (51%), Gaps = 18/235 (7%) Query: 455 TKAKSEFLANMSHEIRTPMNAIIGMSELVLQTDLT-----SQQRNYLQKVQYAGEXXXXX 509 ++ K+ F + SHE RTP++ + ++L+ +++ + RN L ++Q + + Sbjct: 66 SRLKTRFFSMASHEFRTPLSTALAAAQLLENSEVAWLDPDKRSRN-LHRIQNSVKNMVQL 124 Query: 510 XXXXXDFSKMEAGKLELEQKPFSVEEVMGNLHSILGIQAEAKGLTLNFHLDPRIPPILVG 569 ++ EAGKLE ++ + + + + +F + LV Sbjct: 125 LDDILIINRAEAGKLEFNPNWLDLKLLFQQFIEEIQLSVSDQ-YYFDFICSAQDTKALVD 183 Query: 570 DRLRLSQILINLGNNAVKFT-NQGEITIRGQLLKTENEQTKLQFSVTDTGIGLTPDQQSK 628 +RL + IL NL +NA+K++ G+I I L ++EQ + F VTD GIG++P+ Q + Sbjct: 184 ERL-VRSILSNLLSNAIKYSPGGGQIKIA---LSLDSEQ--IIFEVTDQGIGISPEDQKQ 237 Query: 629 LFQWFNQGETSTSRQYGGTGLGLAISKSLTELMGGDIWLESVVGQGSTFHFTVCL 683 +F+ F++G+ R GTGLGL ++K +L G I L+S V QG+T T+CL Sbjct: 238 IFEPFHRGK--NVRNITGTGLGLMVAKKCVDLHSGSILLKSAVDQGTT--VTICL 288 >SYNE-PCC-01-001690 slr0473 Length = 748 Score = 79.0 bits (193), Expect = 6e-17 Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 10/220 (4%) Query: 466 SHEIRTPMNAIIGMSELVLQTDLTSQQRNYLQKVQYAGEXXXXXXXXXXDFSKMEAGKLE 525 SH+++ P+N + +L+ + + + +A D + Sbjct: 537 SHDLQEPLNQVSNYVQLLEMRYSEALDEDAKDFIDFAVTGVSLMQTLIDDILTYAKVDTQ 596 Query: 526 LEQKPFS-VEEVMGNLHSILGIQAEAKGLTLNFHLDPRIPPILVGDRLRLSQILINLGNN 584 Q F+ V+EV+ + L + E G ++ P ++ D+++L Q+ NL N Sbjct: 597 YAQLTFTDVQEVVDKALANLKQRIEESGA----EIEVGSMPAVMADQIQLMQVFQNLIAN 652 Query: 585 AVKFTNQGEITIRGQLLKTENEQTKLQFSVTDTGIGLTPDQQSKLFQWFNQGETSTSRQY 644 +KF I+ + + ++ F+V D GIG+ P ++F F + T +Y Sbjct: 653 GIKFAGDKSPKIK---IWGDRQEDAWVFAVQDNGIGIDPQFFERIFVIFQR--LHTRDEY 707 Query: 645 GGTGLGLAISKSLTELMGGDIWLESVVGQGSTFHFTVCLG 684 GTG+GLAI K + E G IWLES G+GSTF+F++ +G Sbjct: 708 KGTGMGLAICKKIIEGHQGQIWLESNPGEGSTFYFSIPIG 747 >SYNE-PCC-01-002086 slr1042 Length = 147 Score = 68.9 bits (167), Expect = 7e-14 Identities = 36/113 (31%), Positives = 63/113 (55%) Query: 719 SILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYD 778 ++LLVED+ RE +L G +V +A +G EAL L + + D +++DI MP +NGY+ Sbjct: 29 AVLLVEDSSSQREMISGILKDHGWQVTIACDGVEALEKLQNFSPDLVVLDIVMPRMNGYE 88 Query: 779 ATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLFQTL 831 R I+ +N+P+I ++ D+ + G + ++ KP +P L T+ Sbjct: 89 VCRRIKSDPKTKNVPVIMCSSKGEEFDRFWGMRQGADAYIAKPFQPMELVGTI 141 >SYNE-PCC-01-001133 sll1673 Length = 452 Score = 68.9 bits (167), Expect = 7e-14 Identities = 39/111 (35%), Positives = 64/111 (57%) Query: 713 TQLEGASILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMP 772 T + +ILLV+D N + DLL + G V+ +G+ AL L D IL+DI+MP Sbjct: 4 TDEKKGNILLVDDLPNNLQLLSDLLINLGYTVRSVTSGKMALRTLQVKRPDLILLDIKMP 63 Query: 773 MLNGYDATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIK 823 ++GY I+++E +++PII ++A D+ KA + G D++TKP + Sbjct: 64 DMDGYQVCEMIKKEEELQDIPIIFISALGDTFDKVKAFECGGVDYITKPFQ 114 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 68.2 bits (165), Expect = 1e-13 Identities = 37/112 (33%), Positives = 62/112 (55%) Query: 716 EGASILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLN 775 E +LLV+D+ D L +G +V A NG+EAL LLT+ D I+ DI MP ++ Sbjct: 6 ENYHLLLVDDDPNLLLLVKDYLEYQGYQVTTAGNGREALDLLTTTVPDMIVCDIMMPEMD 65 Query: 776 GYDATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLL 827 GY +RQ +P++ ++A + ++ K L+ G + ++ KP +P+ L Sbjct: 66 GYAFIEQVRQNPDISWIPVMFLSAKGQSHNRVKGLNVGADIYMAKPFEPEEL 117 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 67.8 bits (164), Expect = 1e-13 Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 2/153 (1%) Query: 716 EGASILLVEDNEINREFAHDLLTSKG-LRVQVANNGQEALTLLTSNTYDAILMDIQMPML 774 E S+LLV+D RE L G +V +A N EA L + ++ DI MP + Sbjct: 54 EPISLLLVDDEPGVRESVQAFLEDSGDFKVDLAANATEAWDYLQHHLPALVISDIMMPQV 113 Query: 775 NGYDATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLFQTLAHW 834 +GY + +R+ ++LP++ +TA M GD+ + G + L+KP PD L + + Sbjct: 114 DGYQFLQKLREDARFQSLPVVFLTARGMTGDRIQGYQTGCDAFLSKPFDPDELEAIVRNL 173 Query: 835 IPPNSAREKKNPSSNLKADLSFSSMTGINQQIG 867 + A S + K + + + +QIG Sbjct: 174 LARQQASSDAG-SESAKLQEIYQEIRALKEQIG 205 >HINF-KW2-01-000816 HI0837 response regulator (cpxR) Length = 227 Score = 65.9 bits (159), Expect = 6e-13 Identities = 47/145 (32%), Positives = 74/145 (51%), Gaps = 11/145 (7%) Query: 718 ASILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGY 777 + +LLV+D+ E LL +G V+ ANNG EAL L + +Y +L+D+ MP LNG Sbjct: 2 SKLLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKL-NESYKLVLLDVMMPKLNGI 60 Query: 778 DATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLFQTLAHWIPP 837 + + IR+ N+P++ +TA D+ L+ G +D L KP L + + Sbjct: 61 ETLKEIRKVS---NVPVMMLTARGEDIDRVLGLELGADDCLPKPFNDRELIARIKAIL-- 115 Query: 838 NSAREKKNPSSNLK--ADLSFSSMT 860 R +PS+N+ LSF +T Sbjct: 116 ---RRSASPSNNISNVEILSFDGIT 137 >SYNE-PCC-01-002489 slr1588 Length = 421 Score = 62.4 bits (150), Expect = 6e-12 Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 2/116 (1%) Query: 718 ASILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTY--DAILMDIQMPMLN 775 ++IL+VED I RE + L+ + ++ A NG AL LL S D I+ D+ MP ++ Sbjct: 2 STILVVEDEAIIRELIGETLSLENYKILEAENGAVALGLLNSLEVMPDLIICDVMMPEMD 61 Query: 776 GYDATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLFQTL 831 G+ A+++ +P I +TA D K +++G +D+L KP K + L + Sbjct: 62 GHGLITALQKNAKTAAIPFIFLTALGTMQDFRKGMNSGADDYLIKPFKQEDLLNAV 117 >HINF-KW2-01-001671 HI1708 transcriptional regulatory protein (ygiX) Length = 221 Score = 61.6 bits (148), Expect = 1e-11 Identities = 32/102 (31%), Positives = 57/102 (55%), Gaps = 2/102 (1%) Query: 720 ILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYDA 779 ILL+ED+ + LT G V +G+ + LTS YDA+++D+ +P L+G + Sbjct: 3 ILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLEV 62 Query: 780 TRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKP 821 + R H+++P++ +TA ++ K L +G +D+L KP Sbjct: 63 LQQWRSN--HQDVPVLILTARDTLDERVKGLQSGADDYLCKP 102 >SYNE-PCC-01-002618 slr1760 Length = 315 Score = 61.2 bits (147), Expect = 1e-11 Identities = 53/221 (23%), Positives = 101/221 (45%), Gaps = 15/221 (6%) Query: 718 ASILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGY 777 A IL+V+D+ R L +G RV++A NG+EALT + +L+D MP+++G+ Sbjct: 12 AKILVVDDDGFMRMQLRVYLQKEGHRVELATNGEEALTKFAEIKPEVVLLDAVMPVMDGF 71 Query: 778 DATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLFQTLAHWIPP 837 +A+ + + + ++ +T ++A +AG D++TKPI +L Q + + Sbjct: 72 ACCQALMKIYQNPSPLVLMITGLDDEASVDRAFEAGAIDYVTKPIHWAVLRQRVKRLLYQ 131 Query: 838 NSAREK-KNPSSNLKADLSFSSMTGINQQIGMQYIENVELYHRLLVKFG--------DRY 888 N + + ++ + L+ +T + + ++ + E + ++ D + Sbjct: 132 NRLQHQLESVNQMLERLAKVDQLTQLANRRQLELFLDTEWSEAIREQYPFSILLCDIDYF 191 Query: 889 SNFADQFRTEQASDD-----PTAATRYAHSIKGAAALLGIE 924 N+ D + Q DD A TR H K AA G E Sbjct: 192 KNYNDHY-GHQGGDDCLQQVAKALTRVVHRPKDLAARYGGE 231 >HINF-KW2-01-000863 HI0884 aerobic respiration control protein ARCA (arcA) Length = 236 Score = 60.5 bits (145), Expect = 2e-11 Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 11/148 (7%) Query: 720 ILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYDA 779 IL+VED + R + ++G V A NG E +L ++ + ++MDI +P NG Sbjct: 6 ILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILANHNINLVVMDINLPGKNGLLL 65 Query: 780 TRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKP--------DLLFQTL 831 R +R++ +LP+I +T D+ L+ G +D+LTKP P +LL + + Sbjct: 66 ARELREE---LSLPLIFLTGRDNEVDKILGLEIGADDYLTKPFNPRELTIRARNLLHRAM 122 Query: 832 AHWIPPNSAREKKNPSSNLKADLSFSSM 859 H N+ + + K DL+ S+ Sbjct: 123 PHQEKENTFGREFYRFNGWKLDLNSHSL 150 >SYNE-PCC-01-002672 slr1837 Length = 234 Score = 58.9 bits (141), Expect = 7e-11 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 2/106 (1%) Query: 718 ASILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGY 777 A+ILLV+D E L +G + VA+ G+ L + + YD +++D +P ++G Sbjct: 2 ANILLVDDENALTEPLSKALGHQGHTIDVADQGKTGLAMAIAGQYDLLILDWMLPQVSGL 61 Query: 778 DATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIK 823 + R IR + + P++ +TA D+ LDAG +D+L KP + Sbjct: 62 EICRQIRILGH--STPVLFLTAKDTLDDRVAGLDAGGDDYLIKPFE 105 >SYNE-PCC-01-002033 slr0947 Length = 234 Score = 58.5 bits (140), Expect = 9e-11 Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 3/103 (2%) Query: 722 LVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYDATR 781 +V+D R L+ G V A +G+EA+ + D +++D+ MP L+GY + Sbjct: 1 MVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGVCQ 60 Query: 782 AIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKP 824 +R++ ++PII +TA D+ L+ G +D++ KP P Sbjct: 61 ELRKES---DIPIIMLTALGDVADRITGLELGADDYVVKPFSP 100 >SYNE-PCC-01-000414 sll0649 Length = 245 Score = 57.8 bits (138), Expect = 2e-10 Identities = 31/106 (29%), Positives = 54/106 (50%) Query: 719 SILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYD 778 +IL+VED++ + + L + V N+G+ L + D I++D+ +P L+G + Sbjct: 13 NILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLE 72 Query: 779 ATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKP 824 IRQQ ++ I+ +TA D+ L G +D+L KP P Sbjct: 73 VCTRIRQQPGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSP 118 >SYNE-PCC-01-000608 sll0921 Length = 222 Score = 56.6 bits (135), Expect = 3e-10 Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 27/222 (12%) Query: 715 LEGASILLVEDNEINREFAHDLLTSKGLRVQV--ANNGQEALTLLTSNTYDAILMDIQMP 772 +E I L+ED ++ R+ D LT + V A NG+ L ++ D +++DI +P Sbjct: 1 MEKIRIALIEDEDLIRQGLQDALTMEPSFEWVGEAANGRLGLVMMQQTRPDVVIIDIGLP 60 Query: 773 MLNGYDATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLFQTLA 832 +NG D T+ +++ + ++ +T N A AG + + K + +LL + + Sbjct: 61 DMNGIDVTQQLKKGPLNCQCRVVILTLNDQEETVLAAFSAGADAYCMKDSRTELLIEAIQ 120 Query: 833 ------HWIPPNSAR---------EKKNPSSNLKADLSFSSMTGINQ------QIGMQYI 871 WI P AR E PSS + LS+ G+ + Q+ + Sbjct: 121 ATHGGFAWIDPAIARIVLAHAPGAEPSEPSSPSRTSLSY----GLTERELEVLQLIVDGC 176 Query: 872 ENVELYHRLLVKFGDRYSNFADQFRTEQASDDPTAATRYAHS 913 N ++ +L + G ++ + A+D AA R S Sbjct: 177 SNADIAEKLYITVGTVKTHVRNILNKLCANDRTQAAVRAIRS 218 >SYNE-PCC-01-001461 slr0115 Length = 241 Score = 56.2 bits (134), Expect = 4e-10 Identities = 28/102 (27%), Positives = 55/102 (53%) Query: 720 ILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYDA 779 IL+++D+ + L G VQ A +G + L D I++D+ +P ++G+ Sbjct: 4 ILIIDDDPAISDLVSINLEMAGYDVQQAVDGIKGQALAVQLQPDLIMLDLMLPKVDGFTV 63 Query: 780 TRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKP 821 + +R+ E ++P++ +TA D+ + D+G +D+LTKP Sbjct: 64 CQRLRRDERTADIPVLMLTALGQIQDKIQGFDSGADDYLTKP 105 >SYNE-PCC-01-001437 slr0081 Length = 262 Score = 56.2 bits (134), Expect = 4e-10 Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 9/130 (6%) Query: 699 VSILEAKPSVTQAITQLEGASILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLT 758 ++ LEA P Q IL+VED RE L +G V ++G++AL LL Sbjct: 12 MATLEAPPHSLQHQEIPPSHRILVVEDEVSIRETIVLSLQEEGYEVYAVDDGRDALALLQ 71 Query: 759 SNT-------YDAILMDIQMPMLNGYDATRAIRQQEYHRNLPIIAMTANAMAGDQEKALD 811 + D I++DI +P +NG D R++R N PI+ ++A ++ L+ Sbjct: 72 EFSEDPGQAAVDLIILDIMLPQVNGLDVCRSLRFG--GDNTPILIVSAKGSEMEKVTGLE 129 Query: 812 AGMNDHLTKP 821 G +D++TKP Sbjct: 130 VGADDYITKP 139 >HINF-KW2-01-001345 HI1379 phosphate regulon transcriptional regulatory protein (phoB) Length = 231 Score = 55.8 bits (133), Expect = 6e-10 Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 1/108 (0%) Query: 720 ILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYDA 779 IL+VED RE L+ K V A++ + A+ + N IL+D +P +G Sbjct: 5 ILIVEDECAIREMIALFLSQKYYDVIEASDFKTAINKIKENP-KLILLDWMLPGRSGIQF 63 Query: 780 TRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLL 827 + I++QE + +PII +TA + D L+AG +D++TKP P +L Sbjct: 64 IQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDYITKPFSPQIL 111 >SYNE-PCC-01-002486 slr1584 Length = 234 Score = 55.1 bits (131), Expect = 1e-09 Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 2/109 (1%) Query: 720 ILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYDA 779 ILLVED+ E + L+ + V +A + A + YD +++D+ +P L+G Sbjct: 3 ILLVEDDLPLAETLAEALSDQLYTVDIATDASLAWDYASRLEYDLVILDVMLPELDGITL 62 Query: 780 TRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLF 828 + R Y +PI+ MTA D+ LDAG +D++ KP+ LF Sbjct: 63 CQKWRSHSY--LMPILMMTARDTINDKITGLDAGADDYVVKPVDLGELF 109 >SYNE-PCC-01-000242 sll0396 Length = 224 Score = 51.6 bits (122), Expect = 1e-08 Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 2/109 (1%) Query: 720 ILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYDA 779 +L+VE+ E F L +G V VA +G + T D I+++ +P ++G + Sbjct: 5 VLVVEEEEKLARFMELELKYEGYDVSVARDGLKGFTQAQEFPPDLIIVNGALPGMSGLEL 64 Query: 780 TRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLF 828 R +R E +PII +TA ++ LDAG +D++ KP D F Sbjct: 65 CRRLR--EMGSRIPIILITAKDDVEERVMGLDAGADDYIVKPFNSDEFF 111 >SYNE-PCC-01-000523 sll0797 Length = 234 Score = 44.7 bits (104), Expect = 1e-06 Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 4/104 (3%) Query: 720 ILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSN--TYDAILMDIQMPMLNGY 777 ILLVED +L S+ V +G +A L + Y ++D +P L+G Sbjct: 3 ILLVEDETDLGMAIKKVLVSEKYVVDWVTDGSQAWDYLENQWTEYTLAIVDWLLPGLSGL 62 Query: 778 DATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKP 821 + + +R Q +LP++ +TA ++ + LDAG +D+LTKP Sbjct: 63 ELCQKLRTQG--NSLPVLMLTALGEPENRVEGLDAGADDYLTKP 104 >HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator protein (narP) Length = 208 Score = 43.9 bits (102), Expect = 2e-06 Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 4/114 (3%) Query: 720 ILLVEDNEINREFAHDLLTSKGLRVQVAN--NGQEALTLLTSNTYDAILMDIQMPMLNGY 777 +LL++D+ + R L+ VA+ +G E +++ + D I++D+ M L+G Sbjct: 7 VLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMKGLSGL 66 Query: 778 DATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLFQTL 831 D + +R + I+ +T + D +DAG + +L K +PD L + + Sbjct: 67 DTLKGLRAEGVDAR--ILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQI 118 >SYNE-PCC-01-001575 slr0312 Length = 209 Score = 43.1 bits (100), Expect = 4e-06 Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 12/136 (8%) Query: 712 ITQLEGASILLVEDNEINREFAHDLLTSKGLRVQV---ANNGQEALTLLTSNTYDAILMD 768 ++Q +L+ +D+ I R+ ++ ++ +QV A NG++A+ L + D LMD Sbjct: 1 MSQATTIRVLIADDHAIFRQGLATII-NRDPDMQVIAQAENGEQAIALFEEHQPDVTLMD 59 Query: 769 IQMPMLNGYDATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLF 828 ++MP + G A AI + II +T D + L AG +L K +PD L Sbjct: 60 LRMPEVEGVAAISAI--CAIVKFARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELL 117 Query: 829 QTL------AHWIPPN 838 + +IPP+ Sbjct: 118 NAIRTVHRGQKYIPPD 133 >SYNE-PCC-01-000518 sll0789 Length = 232 Score = 42.7 bits (99), Expect = 5e-06 Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 4/104 (3%) Query: 720 ILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSN--TYDAILMDIQMPMLNGY 777 +LLVED L + V +G A + L Y + D +P L+G Sbjct: 3 LLLVEDEPDLGMALEKALRRENYVVDWVQDGNLAWSYLDQGWVNYTLAIFDWMVPGLSGL 62 Query: 778 DATRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKP 821 + + +R Q +LPI+ +TA D+ + LDAG +D+L KP Sbjct: 63 ELCQKLRGQR--SSLPILMLTAKDQIADRVEGLDAGADDYLIKP 104 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.318 0.134 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,590 Number of Sequences: 78 Number of extensions: 3765 Number of successful extensions: 121 Number of sequences better than 1.0e-05: 38 Number of HSP's better than 0.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 30 Number of HSP's gapped (non-prelim): 55 length of query: 950 length of database: 48,235 effective HSP length: 71 effective length of query: 879 effective length of database: 42,697 effective search space: 37530663 effective search space used: 37530663 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 97 (42.0 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SYNE-PCC-01-002951 ssl0564 (89 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SYNE-PCC-01-002951 ssl0564 182 2e-49 SYNE-PCC-01-002731 slr1909 67 9e-15 SYNE-PCC-01-002635 slr1783 60 2e-12 SYNE-PCC-01-001160 sll1708 52 4e-10 HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator pr... 49 3e-09 SYNE-PCC-01-000511 sll0782 48 6e-09 SYNE-PCC-01-001575 slr0312 47 1e-08 SYNE-PCC-01-000608 sll0921 47 1e-08 SYNE-PCC-01-001075 sll1592 46 2e-08 SYNE-PCC-01-001039 sll1544 42 5e-07 >SYNE-PCC-01-002951 ssl0564 Length = 89 Score = 182 bits (462), Expect = 2e-49 Identities = 89/89 (100%), Positives = 89/89 (100%) Query: 1 MLAGNYQPPASLSDRELEILDLVAIGLTNQEVSERLEISKRTVDNHVSNILTKTNTENRV 60 MLAGNYQPPASLSDRELEILDLVAIGLTNQEVSERLEISKRTVDNHVSNILTKTNTENRV Sbjct: 1 MLAGNYQPPASLSDRELEILDLVAIGLTNQEVSERLEISKRTVDNHVSNILTKTNTENRV 60 Query: 61 ELVRWALQWGKVCLNDVNCCILPGQGSGS 89 ELVRWALQWGKVCLNDVNCCILPGQGSGS Sbjct: 61 ELVRWALQWGKVCLNDVNCCILPGQGSGS 89 >SYNE-PCC-01-002731 slr1909 Length = 213 Score = 67.4 bits (163), Expect = 9e-15 Identities = 29/57 (50%), Positives = 44/57 (77%) Query: 12 LSDRELEILDLVAIGLTNQEVSERLEISKRTVDNHVSNILTKTNTENRVELVRWALQ 68 L+ E +++ LVA GL N+E+++ L++S+RTV++HVSN+L KT NR EL RWA+Q Sbjct: 153 LTPTETKVIQLVAQGLANREIADHLKVSQRTVESHVSNMLNKTGLHNRTELARWAIQ 209 >SYNE-PCC-01-002635 slr1783 Length = 282 Score = 59.7 bits (143), Expect = 2e-12 Identities = 29/56 (51%), Positives = 41/56 (73%) Query: 15 RELEILDLVAIGLTNQEVSERLEISKRTVDNHVSNILTKTNTENRVELVRWALQWG 70 RE +LDLV+ GL N+E++ +L+ S R V+ +VS + TKT T +R ELVR+ALQ G Sbjct: 224 REQSVLDLVSQGLMNKEIAAQLKTSVRNVEKYVSRLFTKTGTNSRTELVRFALQHG 279 >SYNE-PCC-01-001160 sll1708 Length = 226 Score = 52.0 bits (123), Expect = 4e-10 Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 8/76 (10%) Query: 5 NYQPP--------ASLSDRELEILDLVAIGLTNQEVSERLEISKRTVDNHVSNILTKTNT 56 N +PP +SLS+RE+++L L+ G +NQE+++ L +S T+ HV I+ K + Sbjct: 151 NLKPPVPEGQADVSSLSEREIDVLKLIVEGKSNQEIAQTLYLSTNTIKTHVRGIMNKLSV 210 Query: 57 ENRVELVRWALQWGKV 72 ++RV+ AL+ G V Sbjct: 211 DDRVQAAVIALRSGLV 226 >HINF-KW2-01-000704 HI0726 nitrate/nitrite response regulator protein (narP) Length = 208 Score = 49.3 bits (116), Expect = 3e-09 Identities = 23/53 (43%), Positives = 37/53 (69%) Query: 8 PPASLSDRELEILDLVAIGLTNQEVSERLEISKRTVDNHVSNILTKTNTENRV 60 P SL+DRE+ +L +A GL+N++++ +L IS+ TV H+ N+L K N +RV Sbjct: 145 PLDSLTDREMGVLRQIATGLSNKQIAAQLFISEETVKVHIRNLLRKLNVHSRV 197 >SYNE-PCC-01-000511 sll0782 Length = 369 Score = 48.1 bits (113), Expect = 6e-09 Identities = 25/59 (42%), Positives = 38/59 (64%) Query: 12 LSDRELEILDLVAIGLTNQEVSERLEISKRTVDNHVSNILTKTNTENRVELVRWALQWG 70 LS+RE EI+ L+A GL +++++E L IS+ TV HV+ L K N +NR + + A G Sbjct: 309 LSEREKEIVSLLAQGLRDRDIAEELHISESTVKFHVNGTLHKLNAKNRYQAIYQATVQG 367 >SYNE-PCC-01-001575 slr0312 Length = 209 Score = 47.4 bits (111), Expect = 1e-08 Identities = 25/63 (39%), Positives = 41/63 (65%) Query: 12 LSDRELEILDLVAIGLTNQEVSERLEISKRTVDNHVSNILTKTNTENRVELVRWALQWGK 71 LS+RELE+L +A G++N +++ L I + TV +HV+ IL K + +R + V A++ G Sbjct: 147 LSERELEVLGSLAQGMSNADIATALSIGEGTVKSHVNRILNKLDVGDRTQAVIVAVKRGI 206 Query: 72 VCL 74 V L Sbjct: 207 VSL 209 >SYNE-PCC-01-000608 sll0921 Length = 222 Score = 47.4 bits (111), Expect = 1e-08 Identities = 24/61 (39%), Positives = 38/61 (62%) Query: 12 LSDRELEILDLVAIGLTNQEVSERLEISKRTVDNHVSNILTKTNTENRVELVRWALQWGK 71 L++RELE+L L+ G +N +++E+L I+ TV HV NIL K +R + A++ G Sbjct: 161 LTERELEVLQLIVDGCSNADIAEKLYITVGTVKTHVRNILNKLCANDRTQAAVRAIRSGL 220 Query: 72 V 72 V Sbjct: 221 V 221 >SYNE-PCC-01-001075 sll1592 Length = 226 Score = 46.2 bits (108), Expect = 2e-08 Identities = 25/57 (43%), Positives = 35/57 (61%) Query: 12 LSDRELEILDLVAIGLTNQEVSERLEISKRTVDNHVSNILTKTNTENRVELVRWALQ 68 L+ RELEIL LVA G +NQE+++ L I+ TV HV IL K +R + A++ Sbjct: 164 LTKRELEILSLVAKGKSNQEIADELYIAPGTVRVHVHTILRKLEVRDRTQAALLAIE 220 >SYNE-PCC-01-001039 sll1544 Length = 228 Score = 41.6 bits (96), Expect = 5e-07 Identities = 22/59 (37%), Positives = 32/59 (54%) Query: 12 LSDRELEILDLVAIGLTNQEVSERLEISKRTVDNHVSNILTKTNTENRVELVRWALQWG 70 L+ RE+ IL LVA G TN E+ + L ++ TV +V I+ K N +R L+ G Sbjct: 167 LTQREVAILRLVAEGKTNSEIGQELHLASSTVREYVQTIMRKLNARDRTSAAIAGLREG 225 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.315 0.133 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8808 Number of Sequences: 78 Number of extensions: 344 Number of successful extensions: 14 Number of sequences better than 1.0e-05: 10 Number of HSP's better than 0.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 4 Number of HSP's gapped (non-prelim): 10 length of query: 89 length of database: 48,235 effective HSP length: 49 effective length of query: 40 effective length of database: 44,413 effective search space: 1776520 effective search space used: 1776520 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 86 (37.7 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MJAN-DSM-01-000260 MJ0255 conserved hypothetical protein {Xanthobacter sp.} (251 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value MJAN-DSM-01-000260 MJ0255 conserved hypothetical protein {Xanth... 503 e-145 >MJAN-DSM-01-000260 MJ0255 conserved hypothetical protein {Xanthobacter sp.} Length = 251 Score = 503 bits (1294), Expect = e-145 Identities = 251/251 (100%), Positives = 251/251 (100%) Query: 1 MKAFEFLYEDFQRGLTVVLDKGLPPKFVEDYLKVCGDYIDFVKFGWGTSAVIDRDVVKEK 60 MKAFEFLYEDFQRGLTVVLDKGLPPKFVEDYLKVCGDYIDFVKFGWGTSAVIDRDVVKEK Sbjct: 1 MKAFEFLYEDFQRGLTVVLDKGLPPKFVEDYLKVCGDYIDFVKFGWGTSAVIDRDVVKEK 60 Query: 61 INYYKDWGIKVYPGGTLFEYAYSKGKFDEFLNECEKLGFEAVEISDGSSDISLEERKNAI 120 INYYKDWGIKVYPGGTLFEYAYSKGKFDEFLNECEKLGFEAVEISDGSSDISLEERKNAI Sbjct: 61 INYYKDWGIKVYPGGTLFEYAYSKGKFDEFLNECEKLGFEAVEISDGSSDISLEERKNAI 120 Query: 121 KRAKDNGFMVLTEVGKKMPDKDKQLTIDDRIKLINFDLDAGADYVIIEGRESGKGIGLFD 180 KRAKDNGFMVLTEVGKKMPDKDKQLTIDDRIKLINFDLDAGADYVIIEGRESGKGIGLFD Sbjct: 121 KRAKDNGFMVLTEVGKKMPDKDKQLTIDDRIKLINFDLDAGADYVIIEGRESGKGIGLFD 180 Query: 181 KEGKVKENELDVLAKNVDINKVIFEAPQKSQQVAFILKFGSSVNLANIAFDEVISLETLR 240 KEGKVKENELDVLAKNVDINKVIFEAPQKSQQVAFILKFGSSVNLANIAFDEVISLETLR Sbjct: 181 KEGKVKENELDVLAKNVDINKVIFEAPQKSQQVAFILKFGSSVNLANIAFDEVISLETLR 240 Query: 241 RGLRGDTFGKV 251 RGLRGDTFGKV Sbjct: 241 RGLRGDTFGKV 251 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.319 0.142 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,157 Number of Sequences: 78 Number of extensions: 1113 Number of successful extensions: 10 Number of sequences better than 1.0e-05: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 9 Number of HSP's gapped (non-prelim): 1 length of query: 251 length of database: 48,235 effective HSP length: 61 effective length of query: 190 effective length of database: 43,477 effective search space: 8260630 effective search space used: 8260630 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 91 (39.7 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MJAN-DSM-01-001076 MJ1053 hypothetical protein (163 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value MJAN-DSM-01-001076 MJ1053 hypothetical protein 225 5e-62 >MJAN-DSM-01-001076 MJ1053 hypothetical protein Length = 163 Score = 225 bits (574), Expect = 5e-62 Identities = 116/116 (100%), Positives = 116/116 (100%) Query: 1 MIPLVPTSKTEIDKLEHVLILGTLFRPEILELIKDPIEKVTWVDSLAIAAGALAREKAGY 60 MIPLVPTSKTEIDKLEHVLILGTLFRPEILELIKDPIEKVTWVDSLAIAAGALAREKAGY Sbjct: 1 MIPLVPTSKTEIDKLEHVLILGTLFRPEILELIKDPIEKVTWVDSLAIAAGALAREKAGY 60 Query: 61 TIREIADELGRTEQTIRKHLKGETKAGKLVRETYEMMKRGELNIEEVEKFLEAVVR 116 TIREIADELGRTEQTIRKHLKGETKAGKLVRETYEMMKRGELNIEEVEKFLEAVVR Sbjct: 61 TIREIADELGRTEQTIRKHLKGETKAGKLVRETYEMMKRGELNIEEVEKFLEAVVR 116 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.317 0.137 0.369 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,022 Number of Sequences: 78 Number of extensions: 396 Number of successful extensions: 10 Number of sequences better than 1.0e-05: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 9 Number of HSP's gapped (non-prelim): 1 length of query: 163 length of database: 48,235 effective HSP length: 57 effective length of query: 106 effective length of database: 43,789 effective search space: 4641634 effective search space used: 4641634 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 89 (38.9 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MJAN-DSM-01-001277 MJ1254 hypothetical protein (469 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value MJAN-DSM-01-001277 MJ1254 hypothetical protein 682 0.0 >MJAN-DSM-01-001277 MJ1254 hypothetical protein Length = 469 Score = 682 bits (1759), Expect = 0.0 Identities = 358/444 (80%), Positives = 358/444 (80%) Query: 1 MIAFLFYKCFAKNYKINFLYKNSSYINTNTLWLKVIYIKTKDVIIXXXXXXVAFNVSSAY 60 MIAFLFYKCFAKNYKINFLYKNSSYINTNTLWLKVIYIKTKDVII VAFNVSSAY Sbjct: 1 MIAFLFYKCFAKNYKINFLYKNSSYINTNTLWLKVIYIKTKDVIIFLLLFFVAFNVSSAY 60 Query: 61 VIKNLNIDCIVTPDDTINETISFVIYNNEDKNLSHISYTIPQTIRNFTINASAGVKGYSA 120 VIKNLNIDCIVTPDDTINETISFVIYNNEDKNLSHISYTIPQTIRNFTINASAGVKGYSA Sbjct: 61 VIKNLNIDCIVTPDDTINETISFVIYNNEDKNLSHISYTIPQTIRNFTINASAGVKGYSA 120 Query: 121 LYNEGVTEIAIEFEKPIPKGGYTNITINCFVNDAIWTKNGIKQLILSFPITSKNATIKIV 180 LYNEGVTEIAIEFEKPIPKGGYTNITINCFVNDAIWTKNGIKQLILSFPITSKNATIKIV Sbjct: 121 LYNEGVTEIAIEFEKPIPKGGYTNITINCFVNDAIWTKNGIKQLILSFPITSKNATIKIV 180 Query: 181 LPPGAVILSPQGTLLVTPSGYKITTDGKHQIIVWDLSLNKEITFTITVKYTFISYPGQNI 240 LPPGAVILSPQGTLLVTPSGYKITTDGKHQIIVWDLSLNKEITFTITVKYTFISYPGQNI Sbjct: 181 LPPGAVILSPQGTLLVTPSGYKITTDGKHQIIVWDLSLNKEITFTITVKYTFISYPGQNI 240 Query: 241 IEQPAINNNLKYXXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXNIXXXXXXXXXXXXXXX 300 IEQPAINNNLKY V NI Sbjct: 241 IEQPAINNNLKYLLIIAIFGTAIFGGLFVKEKISKRKIIERTKNIKNELTSLKNKLKEKE 300 Query: 301 XXXXXXXXXXXDLEDXXXXXXXXXXXXDEIISVLNERISEYESQIQKLLDENIIYKEKIE 360 DLED DEIISVLNERISEYESQIQKLLDENIIYKEKIE Sbjct: 301 EEIKNLAIKIKDLEDKLSKANKNLLNKDEIISVLNERISEYESQIQKLLDENIIYKEKIE 360 Query: 361 SLNKYIETLKKENDKLKDKVRELSDIAKKYMEEKRGVLWSFLTXXXXXXXXXXXXHGHIT 420 SLNKYIETLKKENDKLKDKVRELSDIAKKYMEEKRGVLWSFLT HGHIT Sbjct: 361 SLNKYIETLKKENDKLKDKVRELSDIAKKYMEEKRGVLWSFLTEDEKIIIDLIKKHGHIT 420 Query: 421 QKEIVEITGMSKPKVSRIISELED 444 QKEIVEITGMSKPKVSRIISELED Sbjct: 421 QKEIVEITGMSKPKVSRIISELED 444 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.317 0.136 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,869 Number of Sequences: 78 Number of extensions: 1537 Number of successful extensions: 42 Number of sequences better than 1.0e-05: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 37 Number of HSP's gapped (non-prelim): 2 length of query: 469 length of database: 48,235 effective HSP length: 66 effective length of query: 403 effective length of database: 43,087 effective search space: 17364061 effective search space used: 17364061 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 94 (40.8 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MPNE-M12-01-000474 gi|13508213|ref|NP_110162.1| coiled coil protein, putative structural protein involved in cytosceleton [Mycoplasma pneumoniae] (1033 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value MPNE-M12-01-000474 gi|13508213|ref|NP_110162.1| coiled coil pro... 1669 0.0 MGEN-G37-01-000335 MG328 conserved hypothetical protein 178 6e-47 MGEN-G37-01-000221 MG218 cytadherence accessory protein (hmw2) 71 2e-14 SCER-S28-01-000806 ORFP:YDL058W USO1, Chr IV from 345664-351036 69 9e-14 SYNE-PCC-01-000727 sll1120 53 4e-09 SCER-S28-01-002651 ORFP:YHR023W MYO1, Chr VIII from 151657-157443 52 7e-09 SCER-S28-01-001306 ORFP:YDR285W ZIP1, Chr IV from 1032427-1035054 49 1e-07 SYNE-PCC-01-001071 sll1583 46 7e-07 >MPNE-M12-01-000474 gi|13508213|ref|NP_110162.1| coiled coil protein, putative structural protein involved in cytosceleton [Mycoplasma pneumoniae] Length = 1033 Score = 1669 bits (4321), Expect = 0.0 Identities = 889/1033 (86%), Positives = 889/1033 (86%) Query: 1 MEFLEQEGQEVLTKEIKAGFCEITPSSITEQTTKPQLDETQLVDEYVHTKELETTPIPIS 60 MEFLEQEGQEVLTKEIKAGFCEITPSSITEQTTKPQLDETQLVDEYVHTKELETTPIPIS Sbjct: 1 MEFLEQEGQEVLTKEIKAGFCEITPSSITEQTTKPQLDETQLVDEYVHTKELETTPIPIS 60 Query: 61 FATKEVLFEEVFNTPSTQQVDESVLVNEYIELTQQIKNASEQVSSNHTHKFSVATEPAAT 120 FATKEVLFEEVFNTPSTQQVDESVLVNEYIELTQQIKNASEQVSSNHTHKFSVATEPAAT Sbjct: 61 FATKEVLFEEVFNTPSTQQVDESVLVNEYIELTQQIKNASEQVSSNHTHKFSVATEPAAT 120 Query: 121 KAVSETMLLDDYVEMVEQDVQAQTALPQAALDPTVSLTFSSPIDSNAILVYPEMKVPHVF 180 KAVSETMLLDDYVEMVEQDVQAQTALPQAALDPTVSLTFSSPIDSNAILVYPEMKVPHVF Sbjct: 121 KAVSETMLLDDYVEMVEQDVQAQTALPQAALDPTVSLTFSSPIDSNAILVYPEMKVPHVF 180 Query: 181 DTVAPTTTTVPLDQTQLLDELVEVPVLTHTVTPAPLQPKAAPTNFALDQTQLVDELVTVP 240 DTVAPTTTTVPLDQTQLLDELVEVPVLTHTVTPAPLQPKAAPTNFALDQTQLVDELVTVP Sbjct: 181 DTVAPTTTTVPLDQTQLLDELVEVPVLTHTVTPAPLQPKAAPTNFALDQTQLVDELVTVP 240 Query: 241 LTHTLVNEXXXXXXXXXXXXXXEHSFSITTVDKANLTNALSQTVVIKPAEDSAHQSAVLD 300 LTHTLVNE EHSFSITTVDKANLTNALSQTVVIKPAEDSAHQSAVLD Sbjct: 241 LTHTLVNESAPVTPVVVTSPAAEHSFSITTVDKANLTNALSQTVVIKPAEDSAHQSAVLD 300 Query: 301 KEIATKXXXXXXXXXXXXXXXXXXETPPVTYMGVEEYKLLXXXXXXXXXXXXSFEMTLLQ 360 KEIATK ETPPVTYMGVEEYKLL SFEMTLLQ Sbjct: 301 KEIATKQAQLQQLQAQIELRQAQLETPPVTYMGVEEYKLLPVQDVVPVQPTVSFEMTLLQ 360 Query: 361 EQLDKALKHNAALQIQLEEQLAKPLQYDQSPVLQERIXXXXXXXXXXXXXXXXXXXKLFK 420 EQLDKALKHNAALQIQLEEQLAKPLQYDQSPVLQERI KLFK Sbjct: 361 EQLDKALKHNAALQIQLEEQLAKPLQYDQSPVLQERIELLQNQNTNLTQELNELQQKLFK 420 Query: 421 SQNNSLLLARLEEENRTLKQHLQNNLPEANQLNFVXXXXXXXXXXDKHSLTLQIEQYKFD 480 SQNNSLLLARLEEENRTLKQHLQNNLPEANQLNFV DKHSLTLQIEQYKFD Sbjct: 421 SQNNSLLLARLEEENRTLKQHLQNNLPEANQLNFVLEKQLEQLQQDKHSLTLQIEQYKFD 480 Query: 481 SKKHQEQLALIPSLRSEINSLETEVISLKQTNQRLSLIERENNFLKTEIKQLRETKLNDE 540 SKKHQEQLALIPSLRSEINSLETEVISLKQTNQRLSLIERENNFLKTEIKQLRETKLNDE Sbjct: 481 SKKHQEQLALIPSLRSEINSLETEVISLKQTNQRLSLIERENNFLKTEIKQLRETKLNDE 540 Query: 541 NTKYRNLLKQYELMRADSDXXXXXXXXXXXXXXXXXXXXXXXXXRHNEALVKELDQVKAT 600 NTKYRNLLKQYELMRADSD RHNEALVKELDQVKAT Sbjct: 541 NTKYRNLLKQYELMRADSDAKLKELEHEQHLAHQHHQEQLAQLQRHNEALVKELDQVKAT 600 Query: 601 NFELGLAAQGFEQQKVVLEQKNSSLLASLQAAEENVQALGITNSELQNQLNVLEFTHKEK 660 NFELGLAAQGFEQQKVVLEQKNSSLLASLQAAEENVQALGITNSELQNQLNVLEFTHKEK Sbjct: 601 NFELGLAAQGFEQQKVVLEQKNSSLLASLQAAEENVQALGITNSELQNQLNVLEFTHKEK 660 Query: 661 TAFDSXXXXXXXXXXXXXXFDLSLTQEQLATFKQQNQSLTDKLMASETQLNHLQQSDENX 720 TAFDS FDLSLTQEQLATFKQQNQSLTDKLMASETQLNHLQQSDEN Sbjct: 661 TAFDSKTLTLTKQQLEQTQFDLSLTQEQLATFKQQNQSLTDKLMASETQLNHLQQSDENL 720 Query: 721 XXXXXXXXXXXXSYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEELTDKCSNIQ 780 SYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEELTDKCSNIQ Sbjct: 721 TQLQTQHELLQESYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEELTDKCSNIQ 780 Query: 781 NELHDLNRVKTNWENLNTEHNLLQDKYAQQKEQMQHEHSNLAQIQAEHELLQESYNKVKA 840 NELHDLNRVKTNWENLNTEHNLLQDKYAQQKEQMQHEHSNLAQIQAEHELLQESYNKVKA Sbjct: 781 NELHDLNRVKTNWENLNTEHNLLQDKYAQQKEQMQHEHSNLAQIQAEHELLQESYNKVKA 840 Query: 841 ELNEIQITNLNEANAQYQDLLSAYELLQSNHNKLKQELQVLNQVNLEKQQLAQKLHNTHQ 900 ELNEIQITNLNEANAQYQDLLSAYELLQSNHNKLKQELQVLNQVNLEKQQLAQKLHNTHQ Sbjct: 841 ELNEIQITNLNEANAQYQDLLSAYELLQSNHNKLKQELQVLNQVNLEKQQLAQKLHNTHQ 900 Query: 901 SLSQTHAELTQLQAAYNNLQATPPVSDELLEQFNQVQLEKQRLLQQNLALVHELQYFNEL 960 SLSQTHAELTQLQAAYNNLQATPPVSDELLEQFNQVQLEKQRLLQQNLALVHELQYFNEL Sbjct: 901 SLSQTHAELTQLQAAYNNLQATPPVSDELLEQFNQVQLEKQRLLQQNLALVHELQYFNEL 960 Query: 961 NSSQTHEIKTKQDETXXXXXXXXXXXXXXXXXXXRLKKRDIVIENKEDALGKLSKKERIQ 1020 NSSQTHEIKTKQDET RLKKRDIVIENKEDALGKLSKKERIQ Sbjct: 961 NSSQTHEIKTKQDETVKEVIIVEKEIPVPPEKKPRLKKRDIVIENKEDALGKLSKKERIQ 1020 Query: 1021 AYAERLAKINGKQ 1033 AYAERLAKINGKQ Sbjct: 1021 AYAERLAKINGKQ 1033 >MGEN-G37-01-000335 MG328 conserved hypothetical protein Length = 756 Score = 178 bits (452), Expect = 6e-47 Identities = 140/467 (29%), Positives = 216/467 (46%), Gaps = 67/467 (14%) Query: 603 ELGLAAQGFEQQKVVLEQKNSSLLASLQAAEENVQALGITNS---ELQNQLNV------- 652 E+ + +Q+K +L + +L ++ + L + N+ ELQNQL Sbjct: 321 EVNEELENLKQEKALLSDQLDALKNKSSNVQQQLALLPVLNNQINELQNQLLTAREANQR 380 Query: 653 LEFTHKEKTAFDSXXXXXXXXXXXXXXFDLSLTQEQLATFKQQNQSLTDKLMASETQLNH 712 L+ +E + Q +N++ DKL + LN Sbjct: 381 LDLVEQENDFLKNELKKLHDNTSNDENEKYDDLLNQYELLFDENETKFDKLQVKQQALNL 440 Query: 713 LQQSDENXXXXXXXXXXXXXSYNKLQD-EANHTQQQFHQAQNELDAAHQQLALFKQNNEE 771 Q + + + +D + N+T+ F + + LD L + N++ Sbjct: 441 DYQKTISALKHENDVLLDEIEWTRSKDNDFNNTKNSFEEQKKALDEKLNGLTI---QNQQ 497 Query: 772 LTDKCSNIQNELHDLNRVKTNW-----ENLNTEHNLL---QDKYAQ-------------- 809 L DK + ++ + + + TN + L NL QDK A Sbjct: 498 LQDKIAELEEWNEEKSNLNTNQLVNLQQQLKDSQNLFNVAQDKLATLEEVNLALNEKIND 557 Query: 810 -QKEQMQHEHSN--LAQIQAEHELLQESYNKVKAELNEIQITNLNEANAQYQDLLSAYEL 866 + E E+SN LA++QA+HE+LQESY K+K + +++ LN+AN QYQDLLSA+E Sbjct: 558 LEDELSGSENSNNLLAKLQADHEILQESYGKLKTDFEKLKKNKLNDANEQYQDLLSAFEE 617 Query: 867 LQSNHNKLKQELQVLNQVNLEKQQLAQKLHNTHQSLSQTHAELTQLQAAYNNLQATPPVS 926 S K KQ L + E QL Q++++ L+ A LQ TP S Sbjct: 618 TNSELEKAKQSLSASDS---ENNQLKQQINS--------------LENAKKELQFTPVTS 660 Query: 927 DELLEQFNQVQLEKQRLLQQNLALVHELQYFNELNSSQTHEIKTKQDETXXXXXXXXXXX 986 DE L++ +++EK++L +N AL ++LQYFN+++++QT EIK DE Sbjct: 661 DEHLDELETLKIEKEQLFLENQALQNQLQYFNDISANQTEEIKEASDE-----------D 709 Query: 987 XXXXXXXXRLKKRDIVIENKEDALGKLSKKERIQAYAERLAKINGKQ 1033 R+KKRD VI+NK+D L KLSKKERIQAYAERLAKIN + Sbjct: 710 KPVEIKKPRIKKRDFVIQNKDDKLAKLSKKERIQAYAERLAKINANE 756 Score = 144 bits (364), Expect = 1e-36 Identities = 110/463 (23%), Positives = 205/463 (44%), Gaps = 43/463 (9%) Query: 431 LEEENRTLKQHLQNNLPEANQLNFVXXXXXXXXXXDKHSLTLQIEQYKFDSKKHQEQLAL 490 L +ENR L + LQN N L+ +K L+ Q++ K S Q+QLAL Sbjct: 297 LLQENRDLYEQLQNKPVAINPLSDEVNEELENLKQEKALLSDQLDALKNKSSNVQQQLAL 356 Query: 491 IPSLRSEINSLETEVISLKQTNQRLSLIERENNFLKTEIKQLRETKLNDENTKYRNLLKQ 550 +P L ++IN L+ ++++ ++ NQRL L+E+EN+FLK E+K+L + NDEN KY +LL Q Sbjct: 357 LPVLNNQINELQNQLLTAREANQRLDLVEQENDFLKNELKKLHDNTSNDENEKYDDLLNQ 416 Query: 551 YELMRADSDXXXXXXXXXXXXXXXXXXXXXXXXXRHNEALVKELDQVKATNFELGLAAQG 610 YEL+ +++ N+ L+ E++ ++ + + Sbjct: 417 YELLFDENETKFDKLQVKQQALNLDYQKTISALKHENDVLLDEIEWTRSKDNDFNNTKNS 476 Query: 611 FEQQKVVLEQKNSSLLASLQAAEENVQALGITNSELQNQLNVLEFTHKEKTAFDSXXXXX 670 FE+QK +A +E + L I N +LQ+++ LE ++EK+ ++ Sbjct: 477 FEEQK--------------KALDEKLNGLTIQNQQLQDKIAELEEWNEEKSNLNTNQLVN 522 Query: 671 XXXXXXXXXFDLSLTQEQLATFKQQNQSLTDKLMASETQLNHLQQSDENXXXXXXXXXXX 730 ++ Q++LAT ++ N +L +K+ E +L+ + S+ Sbjct: 523 LQQQLKDSQNLFNVAQDKLATLEEVNLALNEKINDLEDELSGSENSNNLLAKLQADHEIL 582 Query: 731 XXSYNKLQ-----------DEANHTQQQ----FHQAQNELDAAHQQLALFKQNNEELTDK 775 SY KL+ ++AN Q F + +EL+ A Q L+ N +L + Sbjct: 583 QESYGKLKTDFEKLKKNKLNDANEQYQDLLSAFEETNSELEKAKQSLSASDSENNQLKQQ 642 Query: 776 CSNIQN--------------ELHDLNRVKTNWENLNTEHNLLQDKYAQQKEQMQHEHSNL 821 ++++N L +L +K E L E+ LQ++ + ++ + Sbjct: 643 INSLENAKKELQFTPVTSDEHLDELETLKIEKEQLFLENQALQNQLQYFNDISANQTEEI 702 Query: 822 AQIQAEHELLQESYNKVKAELNEIQITNLNEANAQYQDLLSAY 864 + E + ++ ++K IQ + A ++ + AY Sbjct: 703 KEASDEDKPVEIKKPRIKKRDFVIQNKDDKLAKLSKKERIQAY 745 Score = 50.1 bits (118), Expect = 3e-08 Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 22/101 (21%) Query: 1 MEFLEQEGQEVLTKEIKAGFCEITPSSITEQTTKPQLDETQLVDEYVHTKELETTPIPIS 60 M F E + Q VLTKEIK GF E+ PS IT + K ++ Sbjct: 109 MAFQEVDDQSVLTKEIKTGFQELKPSVITAEDDKDEIKPE-------------------- 148 Query: 61 FATKEVLFEEVFNTPSTQQVDESVLVNEYIELTQQIKNASE 101 ATK+V FEE+FN PS ++++E+ I T ++K + Sbjct: 149 -ATKQVSFEELFNQPS-EEINETKKPEVQIFSTDKVKEPEQ 187 >MGEN-G37-01-000221 MG218 cytadherence accessory protein (hmw2) Length = 1805 Score = 70.9 bits (172), Expect = 2e-14 Identities = 141/620 (22%), Positives = 252/620 (40%), Gaps = 108/620 (17%) Query: 419 FKSQNNSLL-LARLEEENRTLKQHLQNNLPEANQLNFVXXXXXXXXXXDKHSLTLQIEQY 477 F + ++L+ + +L++EN +HL++ + N+ + +L +I ++ Sbjct: 339 FNLRQSALIDINKLQQENELFAKHLEH---QQNEFEQKQSDSLLKLETEYKALQHKINEF 395 Query: 478 KFDSKKHQEQLAL----IPSLRSEINSLETEVISLKQTNQRLS--LIERENNFLKTEIKQ 531 K +S E+L + R EI++L T+ SL+ +QR S L++ + N +K + Sbjct: 396 KNESATKSEELLNQERELFEKRREIDTLLTQA-SLEYEHQRESSQLLKDKQNEVKQHFQN 454 Query: 532 LRETKLNDENTKYRNLLKQYELMRADS--DXXXXXXXXXXXXXXXXXXXXXXXXXRHNEA 589 L K E K RNLL Q + + +++ + NE Sbjct: 455 LEYAK--KELDKERNLLDQQKKVDSEAIFQLKEKVAQERKELEELYLVKKQKQDQKENEL 512 Query: 590 LV--KELDQVKATNFELGLAAQGFEQQKVVLEQKNSSLLASLQAAEENVQALGITNSELQ 647 L K+L Q +A +FE L A+ Q+ + E K++ L S E+ + L ++ Sbjct: 513 LFFEKQLKQHQA-DFENELEAK----QQELFEAKHA-LERSFIKLEDKEKDLNTKAQQIA 566 Query: 648 NQLNVLEFTHKEKTAFDSXXXXXXXXXXXXXXFDLSLTQEQLATFKQQNQSLTDKLMASE 707 N+ + L+ T K K+A F+L L Q + +Q+ Q L + E Sbjct: 567 NEFSQLK-TDKSKSA----------------DFELML-QNEYENLQQEKQKLFQERTYFE 608 Query: 708 TQL----NHLQQSDENXXXXXXXXXXXXXSYN--KLQDEANHTQ---------------- 745 N LQQ E S+ +L ++ H + Sbjct: 609 RNAAVLSNRLQQKREELLQQKETLDQLTKSFEQERLINQREHKELVASVEKQKEILGKKL 668 Query: 746 QQFHQAQNEL--DAAHQQLAL-FKQNNEELTDKCSNIQNELHDLNRVKTNWENLNTEHNL 802 Q F Q + A +++A+ FK+ E T+K + N++++ ++ + LN N Sbjct: 669 QDFSQTSLNASKNLAEREMAIKFKEKEIEATEK--QLLNDVNNAEVIQADLAQLNQSLNQ 726 Query: 803 LQDKYAQQKEQMQHEHSNLAQIQAEHELLQESYNKVKAELNEIQITNLNEANAQYQDLLS 862 + + K+++ H++ + E+EL ++ L E+Q N+ YQ+ Sbjct: 727 ERSELQNAKQRIADFHNDSLKKLNEYEL------SLQKRLQELQTLEANQKQHSYQN--Q 778 Query: 863 AYELLQSNHNKLKQELQVLNQVNLEKQQ------LAQKLHNTHQSLSQTHAELTQLQAAY 916 AY + +KL +E Q +NL K+Q + Q+L + HQ+L+ AEL + Sbjct: 779 AY--FEGELDKLNREKQAF--LNLRKKQTMEVDAIKQRLSDKHQALNMQQAELDRKTHEL 834 Query: 917 NN-----------LQ---ATPPVSDELLEQFNQVQLEKQRLLQQNLA--------LVHEL 954 NN LQ AT + +L++ LEKQR +N+A +L Sbjct: 835 NNAFLNHDADQKSLQDQLATVKETQKLIDLERSALLEKQREFAENVAGFKRHWSNKTSQL 894 Query: 955 QYFNELNSSQTHEIKTKQDE 974 Q EL Q E K+ E Sbjct: 895 QKIYELTKKQESEQTQKETE 914 Score = 53.9 bits (128), Expect = 2e-09 Identities = 116/556 (20%), Positives = 214/556 (38%), Gaps = 93/556 (16%) Query: 472 LQIEQYKFDSKKHQEQLALIPSLRSEINSLETEVISLK----------QTNQRLSLIERE 521 LQ E K SK +++ L EI SLE E+ +LK + +++++ +E + Sbjct: 23 LQSEYEKNRSKTDVDKIE--NQLLKEIKSLEDELKNLKGLKNQAEDNPELDKKINHLEVD 80 Query: 522 NNFLKTEIK--QLRETKLNDENTKYRNLLKQY--ELMRADSDXXXXXXXXXXXXXXXXXX 577 N L E K Q ++ + D+ ++ NL + Y EL R + Sbjct: 81 LNRLVNEYKNFQFQKNHMVDKVSELDNLTRFYKNELTRLQQENADFLNSKYANLANFQAN 140 Query: 578 XXXXXXXRHNEALVKELDQ-VKATNFELGLAAQGFEQQKVVLEQKNSSLLASLQAAEENV 636 H L++ +Q + N ++ Q V L Q + + + Sbjct: 141 YHNKLNDFHR--LIENQNQTINRLNQKIN-GNQNLIDNNVALLQNPNITVEKKNYLLNVI 197 Query: 637 QALGITNSELQNQLNVL----EFTHKEKTAFDSXXXXXXXXXXXXXXFDLSLTQEQLATF 692 L +L+NQ +L E T++E + D+ ++ Q Q+ F Sbjct: 198 DQLYNELDQLENQKRLLSIEYENTYRELVSADNELQNVYE----------NIDQNQIQ-F 246 Query: 693 KQQNQSLTDKLMASETQLNHLQQSDENXXXXXXXXXXXXXSYNKLQDEANHTQQQFHQAQ 752 K Q Q+ D+L E ++ +Q + L+ + + + Sbjct: 247 KHQYQTYRDELSQLERKIQLTKQE-------------LVDKESALRVKIDDADFYINARL 293 Query: 753 NELDAAHQQLA----LFKQNNEELTDKCSNIQNELHDLNRVKTNWENLNT---------- 798 ELD +QL+ + KQN + + DK + E LN K + NL Sbjct: 294 AELDDVAKQLSFQDGITKQNAQHVEDKLVALNKEKDRLNTQKEAFFNLRQSALIDINKLQ 353 Query: 799 EHNLLQDKYA--QQKEQMQHEHSNLAQIQAEHELLQESYNKVKAE--------LNEIQI- 847 + N L K+ QQ E Q + +L +++ E++ LQ N+ K E LN+ + Sbjct: 354 QENELFAKHLEHQQNEFEQKQSDSLLKLETEYKALQHKINEFKNESATKSEELLNQEREL 413 Query: 848 --------TNLNEANAQYQDLLSAYELLQSNHNKLKQELQVL----NQVNLEKQQLAQKL 895 T L +A+ +Y+ + +LL+ N++KQ Q L +++ E+ L Q+ Sbjct: 414 FEKRREIDTLLTQASLEYEHQRESSQLLKDKQNEVKQHFQNLEYAKKELDKERNLLDQQK 473 Query: 896 HNTHQSLSQTHAELTQLQAAYNNLQATPPVSDELLEQFNQVQLEKQRLLQQNLALVHELQ 955 +++ Q ++ Q + L L+++ Q Q E + L + H+ Sbjct: 474 KVDSEAIFQLKEKVAQERKELEELY--------LVKKQKQDQKENELLFFEKQLKQHQAD 525 Query: 956 YFNELNSSQTHEIKTK 971 + NEL + Q + K Sbjct: 526 FENELEAKQQELFEAK 541 Score = 48.9 bits (115), Expect = 8e-08 Identities = 115/625 (18%), Positives = 229/625 (36%), Gaps = 63/625 (10%) Query: 360 QEQLDKALKHNAALQIQLEEQLAKPLQYDQSPVLQERIXXXXXXXXXXXXXXXXXXXKLF 419 Q +LDK + N ++++L+ + + LQ + +Q ++ F Sbjct: 944 QRELDKLAEKNNQVKLELDNRF-QALQNQKQDTVQAQLELEREQHQLNLEQTA------F 996 Query: 420 KSQNNSLLLARLEEENRTLKQHLQNNLPEANQLNFVXXXXXXXXXXDKHSLTLQIEQYKF 479 N SLL R + + H + L + NQ + D+ +I ++F Sbjct: 997 NQANESLLKQREQLTKKIQAFHYE--LKKRNQFLALKGKRLFAKEQDQQRKDQEIN-WRF 1053 Query: 480 DSKKHQEQLALIPSLRSEINSLETEVISLKQTNQRLSLIERENNFLKTEIKQLRETKLND 539 + +E + + E+ LE SL Q+N L ER+ L T+ L + + N Sbjct: 1054 -KQFEKEYTDFDEAKKRELEELEKIRRSLSQSNVEL---ERKREKLATDFTNLNKVQHNT 1109 Query: 540 E--NTKYRNLLKQYELMRADSDXXXXXXXXXXXXXXXXXXXXXXXXXRHNEALV------ 591 + + + ++Q+ L R + EAL Sbjct: 1110 QINRDQLNSQIRQFLLERKNFQRFSNEANAKKAFLIKRLRSFASNLKLQKEALAIQKLEF 1169 Query: 592 --------KELDQVKATNFELGLAAQGFEQQKVVLEQKNSSLLASLQAAE--ENVQALGI 641 KEL Q L L FE+Q +E++ + Q + + +AL Sbjct: 1170 DKRDEQQKKELQQAT-----LQLEQFKFEKQNFDIEKQRQLVAIKTQCEKLSDEKKALNQ 1224 Query: 642 TNSELQNQLNVLEFTHKEKTAFDSXXXXXXXXXXXXXXFDLSLTQEQLATFKQQNQSLTD 701 EL+N L+ +K K + +L T++QL ++++S+ Sbjct: 1225 KLVELKN-LSQTYLANKNKAEYSQQQLQQKYTNLLDLKENLERTKDQL---DKKHRSIFA 1280 Query: 702 KLMASETQLNHLQQSDENXXXXXXXXXXXXXSYNKLQDEANHTQQQFHQAQNELD----A 757 +L L ++ N+L E ++ H NE + Sbjct: 1281 RLTKFANDLRFEKKQ-------LLKAQRIVDDKNRLLKE---NERNLHFLSNETERKRAV 1330 Query: 758 AHQQLALFKQNNEELTDKC----SNIQNELHDLNRVKTNWENLNTEHNLLQDKYAQQKEQ 813 Q++ F++ ++ TD ++ + +L ++ E T+ N K+++Q+E+ Sbjct: 1331 LEDQISYFEKQRKQATDAILASHKEVKKKEGELQKLLVELETRKTKLNNDFAKFSRQREE 1390 Query: 814 MQHEHSNLAQIQAEHELLQESYN-KVKA--ELNEIQITNLNEANAQYQDLLSAYELLQSN 870 +++ L ++Q + S N K KA E+ + E N Q ++ L Sbjct: 1391 FENQRLKLLELQKTLQTQTNSNNFKTKAIQEIENSYKRGMEELNFQKKEFDKNKSRLYEY 1450 Query: 871 HNKLKQELQ-VLNQVNLEKQQLAQKLHNTHQSLSQTHAELTQLQAAYNNLQATPPVSDEL 929 K++ E++ +QV L ++ +K + ++ + E + L+A D+ Sbjct: 1451 FRKMRDEIERKESQVKLVLKETQRKANLLEAQANKLNIEKNTIDFKEKELKAFKDKVDQD 1510 Query: 930 LEQFNQVQLEKQRLLQQNLALVHEL 954 ++ N+ + E LL +N L L Sbjct: 1511 IDSTNKQRKELNELLNENKLLQQSL 1535 Score = 47.0 bits (110), Expect = 3e-07 Identities = 116/578 (20%), Positives = 214/578 (37%), Gaps = 109/578 (18%) Query: 422 QNNSLLLARLEEENRTLKQHLQNNLPEANQLNFVXXXXXXXXXXDKHSLTLQIEQYKFDS 481 QN + L++ NR + L + +++ + DKH L ++Q + D Sbjct: 776 QNQAYFEGELDKLNREKQAFLNLRKKQTMEVDAIKQRLS-----DKHQ-ALNMQQAELDR 829 Query: 482 KKHQEQLALIPSLRSEINSLETEVISLKQTN-----QRLSLIERENNFLKTEIKQLRE-T 535 K H+ A + + ++ SL+ ++ ++K+T +R +L+E++ F + R + Sbjct: 830 KTHELNNAFL-NHDADQKSLQDQLATVKETQKLIDLERSALLEKQREFAENVAGFKRHWS 888 Query: 536 KLNDENTKYRNLLKQYELMRADSDXXXXXXXXXXXXXXXXXXXXXXXXXRHNEALVKELD 595 + K L K+ E + + R EA +ELD Sbjct: 889 NKTSQLQKIYELTKKQESEQTQKETELKIAFSDLQKDYQVFELQKDQEFRQIEAKQRELD 948 Query: 596 QVKATNFELGLAAQGFEQQKVVLEQKNSSLLASLQAAEENVQALGITNSELQNQLNVLEF 655 ++ N ++ L Q + QK ++ A L+ E Q+QLN+ Sbjct: 949 KLAEKNNQVKLELDNRFQ--ALQNQKQDTVQAQLELERE------------QHQLNL--- 991 Query: 656 THKEKTAFDSXXXXXXXXXXXXXXFDLSLTQEQLATFKQQNQSLTDKLMASETQLNHLQQ 715 E+TAF+ Q + KQ+ Q LT K+ A +L ++ Sbjct: 992 ---EQTAFN---------------------QANESLLKQREQ-LTKKIQAFHYEL---KK 1023 Query: 716 SDENXXXXXXXXXXXXXSYNKLQDEANHTQQQFHQAQNELDAAHQQ--------LALFKQ 767 ++ + E N +QF + + D A ++ Q Sbjct: 1024 RNQFLALKGKRLFAKEQDQQRKDQEINWRFKQFEKEYTDFDEAKKRELEELEKIRRSLSQ 1083 Query: 768 NNEELTDKCSNIQNELHDLNRVKTNWE------NLNTEHNLLQDKYAQQKEQMQHEH--- 818 +N EL K + + +LN+V+ N + N LL+ K Q+ + Sbjct: 1084 SNVELERKREKLATDFTNLNKVQHNTQINRDQLNSQIRQFLLERKNFQRFSNEANAKKAF 1143 Query: 819 --SNLAQIQAEHELLQESYNKVKAEL---NEIQITNLNEANAQYQ---------DLLSAY 864 L + +L +E+ K E +E Q L +A Q + D+ Sbjct: 1144 LIKRLRSFASNLKLQKEALAIQKLEFDKRDEQQKKELQQATLQLEQFKFEKQNFDIEKQR 1203 Query: 865 EL--LQSNHNKLKQELQVLNQVNLEKQQLAQ-------KLHNTHQSLSQTHAELTQLQAA 915 +L +++ KL E + LNQ +E + L+Q K + Q L Q + L L+ Sbjct: 1204 QLVAIKTQCEKLSDEKKALNQKLVELKNLSQTYLANKNKAEYSQQQLQQKYTNLLDLK-- 1261 Query: 916 YNNLQATPPVSDE--------LLEQFNQVQLEKQRLLQ 945 NL+ T D+ L + N ++ EK++LL+ Sbjct: 1262 -ENLERTKDQLDKKHRSIFARLTKFANDLRFEKKQLLK 1298 >SCER-S28-01-000806 ORFP:YDL058W USO1, Chr IV from 345664-351036 Length = 1790 Score = 68.6 bits (166), Expect = 9e-14 Identities = 112/575 (19%), Positives = 214/575 (37%), Gaps = 55/575 (9%) Query: 419 FKSQNNSLLLARLEEENRTLKQ------HLQNNLPEANQLNFVXXXXXXXXXXDKHSLTL 472 +K+ N L +LE + LK+ HL+ + + + SL Sbjct: 1094 YKNLKNELE-TKLETSEKALKEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEK 1152 Query: 473 QIEQYKFDSKKHQEQLALIP-SLRSEINSLETEVISLKQTNQRLSLIERENNFLKTEIKQ 531 + E KK++EQ+A EI+ L E+ S +Q N+ I+++N+ L+ E+K Sbjct: 1153 EHEDLAAQLKKYEEQIANKERQYNEEISQLNDEITSTQQENES---IKKKNDELEGEVKA 1209 Query: 532 LRETKLNDENTKYRNLLKQYELMRADSDXXXXXXXXXXXXXXXXXXXXXXXXXRHNEALV 591 ++ T N LK+ E+ D+ + Sbjct: 1210 MKSTSEEQSN------LKKSEI---DALNLQIKELKKKNETNEASLLESIKSVESETVKI 1260 Query: 592 KELDQVKATNFELGLAAQGFEQQKVVLEQKNSSLLASLQAAEENVQALGITNSELQNQLN 651 KEL NF+ ++ E + E KNS L + +E+ + L +EL+ QL Sbjct: 1261 KELQD--ECNFKEKEVSE-LEDKLKASEDKNSKYLELQKESEKIKEELDAKTTELKIQLE 1317 Query: 652 VLEFTHKEKTAFDSXXXXXXXXXXXXXXFDLSLTQEQLATFKQQNQSLTDKLMASETQLN 711 + K K +S + +EQL K + Q LN Sbjct: 1318 KITNLSKAKEKSESELSRLKKTSSE----ERKNAEEQLEKLKNEIQIKNQAFEKERKLLN 1373 Query: 712 HLQQSDENXXXXXXXXXXXXXSYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEE 771 N L+DE Q + E+D +L +N+E Sbjct: 1374 E---------GSSTITQEYSEKINTLEDELIRLQNENELKAKEIDNTRSELEKVSLSNDE 1424 Query: 772 LTDKCSNIQNELHD-----LNRVKTNWENLNTEHNLLQDKYAQQKEQMQHEHSNLAQIQA 826 L ++ N L D +++ N E L + + KEQ++ + A+++ Sbjct: 1425 LLEEKQNTIKSLQDEILSYKDKITRNDEKLLSIERDNKRDLESLKEQLRAAQESKAKVEE 1484 Query: 827 EHELLQESYNKVKAEL---NEIQITNLNEANAQYQDLLSAYELLQSNHNKLKQEL----Q 879 + L+E +K KAEL E+ + + +L S+ E ++ + KL+Q + Sbjct: 1485 GLKKLEEESSKEKAELEKSKEMMKKLESTIESNETELKSSMETIRKSDEKLEQSKKSAEE 1544 Query: 880 VLNQVNLEKQQLAQKLHNTHQSLSQTHAELTQLQAAYNNLQATPPVSDELLEQFNQVQLE 939 + + EK L +++ + + + + ++L + + L+ + ++ N Q + Sbjct: 1545 DIKNLQHEKSDLISRINESEKDIEELKSKLRIEAKSGSELET-------VKQELNNAQEK 1597 Query: 940 KQRLLQQNLALVHELQYFNELNSSQTHEIKTKQDE 974 + ++N L +L+ + EIK+ Q+E Sbjct: 1598 IRINAEENTVLKSKLEDIERELKDKQAEIKSNQEE 1632 Score = 55.8 bits (133), Expect = 6e-10 Identities = 121/616 (19%), Positives = 237/616 (38%), Gaps = 73/616 (11%) Query: 431 LEEENRTLKQHLQN---NLPEANQLNFVXXXXXXXXXXDKHSLTLQIEQYKFDSKKHQEQ 487 L+E L+ L+N +L E QL V DK + T +E YK K ++ Sbjct: 788 LKENFSILETELKNVRDSLDEMTQLRDVLETK------DKENQTALLE-YKSTIHKQED- 839 Query: 488 LALIPSLRSEINSLETEVISLKQTNQRLSLIERENNFLKTEIKQLRETKLNDENTKYR-N 546 S+++ LET + K+ ++ + ++ L E++ + E N + K + N Sbjct: 840 -----SIKTLEKGLETILSQKKKAEDGINKMGKDLFALSREMQAVEENCKNLQKEKDKSN 894 Query: 547 LLKQYELMRADSDXXXXXXXXXXXXXXXXXXXXX-XXXXRHNEALVKELDQVKAT-NFEL 604 + Q E D + E + KEL + K+ Sbjct: 895 VNHQKETKSLKEDIAAKITEIKAINENLEEMKIQCNNLSKEKEHISKELVEYKSRFQSHD 954 Query: 605 GLAAQGFEQQKVV------LEQKNSSLLASLQAAEENVQALGITNSELQNQLNVLEFTHK 658 L A+ E+ K + ++ +N SL+ +A EE+ I S LQN+++ + K Sbjct: 955 NLVAKLTEKLKSLANNYKDMQAENESLI---KAVEESKNESSIQLSNLQNKIDSMS-QEK 1010 Query: 659 EKTAFDSXXXXXXXXXXXXXXFDLSLTQEQLATFKQQNQSLTDKLMASETQLNHLQQSDE 718 E + DL T+E++ + ++ S D+ E+Q++ L++ E Sbjct: 1011 ENFQIERGSIEKNIEQLKKTISDLEQTKEEIIS---KSDSSKDEY---ESQISLLKEKLE 1064 Query: 719 NXXXXXXXXXXXXXSYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEELTDKCSN 778 DE + + + + EL+A +LA +K EL K Sbjct: 1065 TATTA--------------NDENVNKISELTKTREELEA---ELAAYKNLKNELETKLET 1107 Query: 779 IQNELHDLNRVKTNWENLNTEHNLLQDKYAQQKEQMQHEHSNLAQIQAEHELLQESYNKV 838 + L + VK N E+L E L+ + + K+Q+ +NL ++ EHE L K Sbjct: 1108 SEKALKE---VKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKY 1164 Query: 839 KAELNEIQITNLNEANAQYQDLLSAYELLQSNHNKLKQELQVLNQVNLEKQQLAQKLHNT 898 + ++ + NE +Q D +++ + Q N + K+ ++ +V K ++ + Sbjct: 1165 EEQIANKE-RQYNEEISQLNDEITSTQ--QENESIKKKNDELEGEVKAMKSTSEEQSNLK 1221 Query: 899 HQSLSQTHAELTQLQAAYNNLQATPPVSDELLEQFNQVQLEKQRLLQQNLALVHELQYFN 958 + + ++ +L+ +A+ LLE V+ E + + ELQ Sbjct: 1222 KSEIDALNLQIKELKKKNETNEAS------LLESIKSVESETVK--------IKELQDEC 1267 Query: 959 ELNSSQTHEIKTKQDETXXXXXXXXXXXXXXXXXXXRLKKRDIVIENKEDALGKLSK-KE 1017 + E++ K + L + ++ + + + LSK KE Sbjct: 1268 NFKEKEVSELEDKLKASEDKNSKYLELQKESEKIKEELDAKTTELKIQLEKITNLSKAKE 1327 Query: 1018 RIQAYAERLAKINGKQ 1033 + ++ RL K + ++ Sbjct: 1328 KSESELSRLKKTSSEE 1343 Score = 53.9 bits (128), Expect = 2e-09 Identities = 103/558 (18%), Positives = 208/558 (37%), Gaps = 89/558 (15%) Query: 432 EEENRTLKQHLQNNLPEANQLNFVXXXXXXXXXXDKHSLTLQIEQYKFDSKKHQEQLALI 491 ++EN ++K+ E + + +L LQI++ K KK++ A Sbjct: 1190 QQENESIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDALNLQIKELK---KKNETNEA-- 1244 Query: 492 PSLRSEINSLETEVISLKQTNQRLSLIERENNFLKTEIKQLRETKLN---DENTKYRNLL 548 SL I S+E+E + +K+ ++ E NF + E+ +L E KL D+N+KY L Sbjct: 1245 -SLLESIKSVESETVKIKE-------LQDECNFKEKEVSEL-EDKLKASEDKNSKYLELQ 1295 Query: 549 KQYELMRADSDXXXXXXXXXXXXXXXXXXXXXXXXXR-------HNEALVKELDQVKATN 601 K+ E ++ + D +E +Q++ Sbjct: 1296 KESEKIKEELDAKTTELKIQLEKITNLSKAKEKSESELSRLKKTSSEERKNAEEQLEKLK 1355 Query: 602 FELGLAAQGFEQQKVVLEQKNSSL--------------LASLQAAEE-----------NV 636 E+ + Q FE+++ +L + +S++ L LQ E + Sbjct: 1356 NEIQIKNQAFEKERKLLNEGSSTITQEYSEKINTLEDELIRLQNENELKAKEIDNTRSEL 1415 Query: 637 QALGITNSEL----QNQLNVLE---FTHKEKTAFDSXXXXXXXXXXXXXXFDLSLTQEQL 689 + + ++N EL QN + L+ ++K+K + DL +EQL Sbjct: 1416 EKVSLSNDELLEEKQNTIKSLQDEILSYKDKITRNDEKLLSIERDNKR---DLESLKEQL 1472 Query: 690 ATFKQQNQSLTDKLMASETQLN----HLQQSDE-----------NXXXXXXXXXXXXXSY 734 ++ + + L E + + L++S E N S Sbjct: 1473 RAAQESKAKVEEGLKKLEEESSKEKAELEKSKEMMKKLESTIESNETELKSSMETIRKSD 1532 Query: 735 NKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEELTDKCSNIQNELHDLNRVKTNWE 794 KL+ ++ Q+E ++ +++ EEL K +L VK Sbjct: 1533 EKLEQSKKSAEEDIKNLQHEKSDLISRINESEKDIEELKSKLRIEAKSGSELETVKQELN 1592 Query: 795 N------LNTEHN-LLQDKYAQQKEQMQHEHSNLAQIQAEHELLQESYNKVKAELNEIQI 847 N +N E N +L+ K + +++ + + + Q E ELL +++ EL+ Q Sbjct: 1593 NAQEKIRINAEENTVLKSKLEDIERELKDKQAEIKSNQEEKELLTSRLKELEQELDSTQ- 1651 Query: 848 TNLNEANAQYQDLLSAYELLQSNHNKLKQELQVL----NQVNLEKQQLAQKLHNTHQSLS 903 +A ++ + Q ++L ++ +L N + ++Q + ++ Sbjct: 1652 ---QKAQKSEEERRAEVRKFQVEKSQLDEKAMLLETKYNDLVNKEQAWKRDEDTVKKTTD 1708 Query: 904 QTHAELTQLQAAYNNLQA 921 E+ +L +NL+A Sbjct: 1709 SQRQEIEKLAKELDNLKA 1726 >SYNE-PCC-01-000727 sll1120 Length = 1200 Score = 53.1 bits (126), Expect = 4e-09 Identities = 59/268 (22%), Positives = 112/268 (41%), Gaps = 26/268 (9%) Query: 686 QEQLATFKQQNQSLTDKLMASETQLNHLQQSDENXXXXXXXXXXXXXSYNKLQDEANHTQ 745 +E L +++ LT +LM Q Q E Q + Q Sbjct: 719 EELLLERTVRSRQLTQQLMEMRQQQREAQLHGEQTERDIARLS---------QQQTQINQ 769 Query: 746 QQFHQAQNELDAAHQQLALFKQNNEELTDKCSNIQNELHDLNRVKTN--WENLNTEHNLL 803 QQ +Q Q +L Q LAL +Q+ L + ++ Q +L L +T+ W+ + + + Sbjct: 770 QQINQ-QQKLAELQQNLALLQQSLPPLEQQLASAQQQLTALETSQTHQQWQTIQIQIRTV 828 Query: 804 QDKYAQQKEQMQHEHSNLAQIQAEHELLQESYNKVKAELNEIQITNLNEANAQYQDLLSA 863 + +Y +Q + ++ +L +Q + L+E + + ++ + Q +L A Q Q ++ Sbjct: 829 EAEYQRQLQALRQGEDHLKDLQNSSQRLEEKIAQAQEKIAQHQAQDLTLAQEQEQLKIAL 888 Query: 864 YEL---LQSNHNKLKQELQVLNQVNLEKQQLAQKLHNTHQSLSQTHAELTQLQAAYNNLQ 920 E+ +Q+ +L + + L E+ +L L+Q ++ + Q + LQ Sbjct: 889 AEMNGAIQTTEAQLAKLSEKLGSTKQERDRL-------ETQLNQLRSQQQEQQWQWEKLQ 941 Query: 921 ATPPVSDELLEQFNQVQLEKQRLLQQNL 948 E L Q Q QLE L+Q+L Sbjct: 942 TNQQEYQENLTQL-QTQLE---ALEQDL 965 Score = 52.0 bits (123), Expect = 9e-09 Identities = 71/360 (19%), Positives = 135/360 (37%), Gaps = 52/360 (14%) Query: 591 VKELDQVKATNFELGLA----AQGFEQQKVVLEQKNSSLLASLQAAEENVQALGITNSEL 646 ++++ QV+ N EL L ++ QQ + + Q+ + E ++ L S+ Sbjct: 708 LQDIQQVQGRNEELLLERTVRSRQLTQQLMEMRQQQREAQLHGEQTERDIARL----SQQ 763 Query: 647 QNQLNVLEFTHKEKTAFDSXXXXXXXXXXXXXXFDLSLTQEQLATFKQQNQSLTDKLMAS 706 Q Q+N + ++K A +L+L Q+ L +QQ S +L A Sbjct: 764 QTQINQQQINQQQKLA--------------ELQQNLALLQQSLPPLEQQLASAQQQLTAL 809 Query: 707 ETQLNHLQQS---------DENXXXXXXXXXXXXXSYNKLQDEANHTQQQFHQAQNELDA 757 ET H Q + LQ+ + +++ QAQ ++ Sbjct: 810 ETSQTHQQWQTIQIQIRTVEAEYQRQLQALRQGEDHLKDLQNSSQRLEEKIAQAQEKIAQ 869 Query: 758 AHQQLALFKQNNEELTDKCSNIQNEL-----------HDLNRVKTNWENLNTEHNLLQDK 806 Q Q E+L + + + L K + L T+ N L+ + Sbjct: 870 HQAQDLTLAQEQEQLKIALAEMNGAIQTTEAQLAKLSEKLGSTKQERDRLETQLNQLRSQ 929 Query: 807 YAQQKEQ-------MQHEHSNLAQIQAEHELLQESYNKVKAELNEIQITNLNEANAQYQD 859 +Q+ Q Q NL Q+Q + E L++ E+ +Q + +EAN + + Sbjct: 930 QQEQQWQWEKLQTNQQEYQENLTQLQTQLEALEQDLPDPWPEIPLLQ--DRDEANLDFAN 987 Query: 860 LLSAYELLQSNHNKLKQELQVLNQVNLEKQQLAQ-KLHNTHQSLSQTHAELTQLQAAYNN 918 +L E N K + ++ +N + L++ + + +L + L E T+L N Sbjct: 988 ILEELERSIRNGQKRLEAMEPVNMLALQEYEKTEARLGELSEKLQTIAGERTELLLRIEN 1047 >SCER-S28-01-002651 ORFP:YHR023W MYO1, Chr VIII from 151657-157443 Length = 1928 Score = 52.4 bits (124), Expect = 7e-09 Identities = 88/460 (19%), Positives = 191/460 (41%), Gaps = 55/460 (11%) Query: 481 SKKHQEQLALIPSLRSEINSLETEVISLKQTNQR-LSLIERENNFLKTEIKQLR--ETKL 537 +KK EQ I L++++ +E++ L++ NQ+ ++ +E + L E + LR E+ L Sbjct: 863 TKKFNEQ---INKLKNDLQEMESKKKFLEEKNQKTVNELENTQDLLNQEKENLRKNESLL 919 Query: 538 NDENTKYRNLLKQYELMRADSDXXXXXXXXXXXXXXXXXXXXXXX--XXRHNEALVKELD 595 N T L KQ++ + ++ D R EA +++L Sbjct: 920 NRVKTSSETLQKQFDDLVSEKDEISREKLEVAQNLEEAHQKIQGLQETIREREATLEKLH 979 Query: 596 --------QVKATNFELGLAAQG---FEQQKVVLEQKNSSLLASLQAAEENVQALGITNS 644 Q+ N ++ ++ K+ LE + L + + EE +++ S Sbjct: 980 SKNNELIKQISDLNCDISKEQSSQSLIKESKLKLENEIKRLKDVINSKEEEIKSFNDKLS 1039 Query: 645 ELQNQLNVLEFTHKEKTAFDSXXXXXXXXXXXXXXFDLSLTQEQLATFKQQNQSLTDKLM 704 + L++ T ++ + DL E FK++ +L ++L Sbjct: 1040 SSEEDLDIKLVTLEK----NCNIAMSRLQSLVTENSDLRSKNEN---FKKEKAALNNQLK 1092 Query: 705 ASETQLNHLQQSDENXXXXXXXXXXXXXSYNKLQDEANHTQQQFHQAQNELDAAHQQLAL 764 E++L +++ +N +++K +D+A + + EL QL Sbjct: 1093 NKESELLKMKEKIDNHKKELA-------TFSKQRDDA---VSEHGKITAELKETRIQLTE 1142 Query: 765 FKQNNEELTDKCSNIQNELHDLNRVKTN--WENLN-TEHNLLQDKYAQQKEQMQHEHSNL 821 +K N +++ ++ SN Q E + + K N E+LN ++ L+ + +Q+ Q+ + + Sbjct: 1143 YKSNYQKIKEEYSNFQRETKEQEQKKRNSLVESLNDSKIKELEARLSQEISLNQYLNKRI 1202 Query: 822 AQIQAEHELLQESYNKVKAELNEI-QITNLNEANAQYQDLLSAYELLQSNHNKLKQELQV 880 S N V+ ++ + T+ ++ +D++ Y LQ ++ + L+ Sbjct: 1203 ------------SGNSVETNISSTRRSTSYSDDPLDKEDIIKKYYDLQLAFTEITRNLE- 1249 Query: 881 LNQVNLEKQQLAQKLHNTHQSLSQTHAELTQLQAAYNNLQ 920 N++ EK+ L +L T L+ + E +++A L+ Sbjct: 1250 -NEIE-EKKNLISRLRFTETRLASSSFEDQKIKAQMKKLK 1287 Score = 47.0 bits (110), Expect = 3e-07 Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 32/252 (12%) Query: 746 QQFHQAQNELDAAHQQLALFKQNNEELTDKCSNIQNELHD-----------LNRVKTNWE 794 +Q ++ +N+L + ++ N++ ++ N Q+ L+ LNRVKT+ E Sbjct: 868 EQINKLKNDLQEMESKKKFLEEKNQKTVNELENTQDLLNQEKENLRKNESLLNRVKTSSE 927 Query: 795 NLNTEHNLLQDKYAQQKEQMQHEHSNLAQ-IQAEHEL---LQESYNKVKAELNEIQITNL 850 L + D +K+++ E +AQ ++ H+ LQE+ + +A L ++ N Sbjct: 928 TLQKQF----DDLVSEKDEISREKLEVAQNLEEAHQKIQGLQETIREREATLEKLHSKN- 982 Query: 851 NEANAQYQDL-------LSAYELLQSNHNKLKQELQ----VLNQVNLEKQQLAQKLHNTH 899 NE Q DL S+ L++ + KL+ E++ V+N E + KL ++ Sbjct: 983 NELIKQISDLNCDISKEQSSQSLIKESKLKLENEIKRLKDVINSKEEEIKSFNDKLSSSE 1042 Query: 900 QSLSQTHAELTQ-LQAAYNNLQATPPVSDELLEQFNQVQLEKQRLLQQNLALVHELQYFN 958 + L L + A + LQ+ + +L + + EK L Q EL Sbjct: 1043 EDLDIKLVTLEKNCNIAMSRLQSLVTENSDLRSKNENFKKEKAALNNQLKNKESELLKMK 1102 Query: 959 ELNSSQTHEIKT 970 E + E+ T Sbjct: 1103 EKIDNHKKELAT 1114 >SCER-S28-01-001306 ORFP:YDR285W ZIP1, Chr IV from 1032427-1035054 Length = 875 Score = 48.5 bits (114), Expect = 1e-07 Identities = 116/592 (19%), Positives = 225/592 (38%), Gaps = 97/592 (16%) Query: 421 SQNNSLLLARLEEENRTLKQHLQNNLPEANQLNFVXXXXXXXXXXDKHSLTLQIEQYKFD 480 + +N +LL R + +L+ L + Q N + + ++ +YK Sbjct: 174 TSSNDVLLEAFTNTQR-ICSNLKQELQKQQQDNAKLKVRLQSYASNSDKINEKVGKYKSC 232 Query: 481 SKKHQEQLALIPSLRSEINSLETEVISLKQTNQRLSLIERENNFLKTEIKQLRETKLND- 539 + QE++A +L S N+ ET++ L+Q +Q L +R + KT I+ L +T +ND Sbjct: 233 LETLQERIA---TLTSHKNNQETKLKDLRQNHQ---LYQRRISGFKTSIENLNKT-INDL 285 Query: 540 -ENTKYRNLL-----KQYELMRADSDXXXXXXXXXXXXXXXXXXXXXXXXXRHNEALVKE 593 +N K + K+ E ++ + D ++ E ++K Sbjct: 286 GKNKKEADAELMKKGKEIEYLKRELDDCSGQLSEEKIKNSSLIQEMG----KNREEMIKS 341 Query: 594 LDQVKATN------------------FELGLAAQ----------GFEQQKVVLEQKNSSL 625 ++ + + FE L G V L ++ Sbjct: 342 IENFFSEDKAHHLLQFNKFEERVHDLFEKKLQKHFDVAKDTLNVGLRNTTVELSSNTETM 401 Query: 626 LAS-LQAAEENV-QALGITNSELQNQLNVLEFTHKEKT-AFDSXXXXXXXXXXXXXXFDL 682 L + +EN+ Q + + E+ +N L T K ++ Sbjct: 402 LKQQYEDIKENLEQKMSSSKDEMAKTINELSVTQKGLIMGVQEELLTSSGNIQTALVSEM 461 Query: 683 SLTQEQLATFKQQNQ----SLTDKLMASETQLNHLQQSDENXXXXXXXXXXXXXSYNKLQ 738 + T+++L Q SL + + A + ++ + +E N++ Sbjct: 462 NNTRQELLDDASQTAKNYASLENLVKAYKAEIVQSNEYEERIKHLESERSTLSSQKNQII 521 Query: 739 DEANHTQQQFHQAQNELDAAHQQLALFKQNNEELTDKCSNIQNE----------LHDLN- 787 + Q+ +L+A + +++ + LT+K N+ NE L++LN Sbjct: 522 SSLGTKEAQYEDLVKKLEAKNIEISQISGKEQSLTEKNENLSNELKKVQDQLEKLNNLNI 581 Query: 788 RVKTNWENLNTEHNLLQDKYAQQKEQMQHEHSNLAQI----QAEHELLQESYNKVKAELN 843 K+N+EN + N + + + ++ L +I Q +H E++ K N Sbjct: 582 TTKSNYENKISSQNEIVKALVSENDTLKQRIQQLVEIKENEQKDHTTKLEAFQK-----N 636 Query: 844 EIQITNLNEANAQYQDLLSAYEL-LQSNHNKLKQEL--------QVLNQVNLEKQQLAQK 894 Q+ LN Q L A+EL L+ + LK L + L+ V KQQ+ Sbjct: 637 NEQLQKLNVEVVQ----LKAHELELEEQNRHLKNCLEKKETGVEESLSDVKTLKQQVI-V 691 Query: 895 LHNTHQSLSQTHAELTQLQAAYNNLQATPPVSDELLEQFNQVQLEKQRLLQQ 946 L + Q ++ AE +LQ +NL++ V+ L + +VQ +K+ L Q+ Sbjct: 692 LKSEKQDIT---AEKLELQ---DNLESLEEVTKNLQQ---KVQSQKRELEQK 734 >SYNE-PCC-01-001071 sll1583 Length = 562 Score = 45.8 bits (107), Expect = 7e-07 Identities = 45/196 (22%), Positives = 77/196 (39%), Gaps = 17/196 (8%) Query: 688 QLATFKQQNQSLTDKLMASETQLNHLQQSDENXXXXXXXXXXXXXSYNKLQDEA------ 741 QL + +NQ L+D QL++++Q+ Q++A Sbjct: 167 QLNSLVTRNQQLSD-------QLSYVEQNQAKAIEQRLASQEKLWQQRHEQEQAQWNSQA 219 Query: 742 NHTQQQFHQAQNELDAAHQQLALFKQNNEELTDKCSNIQNELHDLNRVKTNWENLNTEHN 801 + ++Q Q E D Q+L +Q ++ + N+Q L L + + W+ E + Sbjct: 220 SQWEEQVRQLTAERDQVQQELQTARQQSQSAQTQAENLQAALDRLGQQEEQWQG---ERS 276 Query: 802 LLQDKYAQQKEQMQHEHSNLAQIQAEHELLQESYNKVKAELNEIQITNLNEANAQYQDLL 861 L K Q +E + A+++ + E Q +++K E E Q L A Q L Sbjct: 277 QLTAKLNQLEEAQKELALANAELKVKLETTQAEGDRLKTEKKE-QAAALQSAQGQVTQLQ 335 Query: 862 SAYELLQSNHNKLKQE 877 LQ N K K E Sbjct: 336 QELAALQENLAKAKGE 351 Score = 45.1 bits (105), Expect = 1e-06 Identities = 54/276 (19%), Positives = 102/276 (36%), Gaps = 37/276 (13%) Query: 681 DLSLTQEQLATFKQQNQSLTDKLMASETQLNHLQQSDENXXXXXXXXXXXXXSYNK-LQD 739 DL Q L + LT+ A E + LQ + N+ L Sbjct: 83 DLQSVQASLENALAERNQLTENYQAQEKMVAALQHQLAHYDDIQSEKFVGLQKLNQELLQ 142 Query: 740 EANHTQQQFHQAQNELDAAHQQLALFKQ---NNEELTDKCSNIQNELHDLNRVKTNWENL 796 E + + QA NE+ +L N++L+D+ S ++ N+ K + L Sbjct: 143 ENTNLSDRLKQAVNEVAETRPKLVQLNSLVTRNQQLSDQLSYVEQ-----NQAKAIEQRL 197 Query: 797 NTEHNLLQDKYAQQKEQMQHEHSN----LAQIQAEHELLQESYN---------KVKAELN 843 ++ L Q ++ Q++ Q + S + Q+ AE + +Q+ + +AE Sbjct: 198 ASQEKLWQQRHEQEQAQWNSQASQWEEQVRQLTAERDQVQQELQTARQQSQSAQTQAENL 257 Query: 844 EIQITNLNEANAQYQDLLSAYELLQSNHNKLKQELQVLN---------------QVNLEK 888 + + L + Q+Q S + + ++EL + N ++ EK Sbjct: 258 QAALDRLGQQEEQWQGERSQLTAKLNQLEEAQKELALANAELKVKLETTQAEGDRLKTEK 317 Query: 889 QQLAQKLHNTHQSLSQTHAELTQLQAAYNNLQATPP 924 ++ A L + ++Q EL LQ + PP Sbjct: 318 KEQAAALQSAQGQVTQLQQELAALQENLAKAKGEPP 353 Score = 44.3 bits (103), Expect = 2e-06 Identities = 64/272 (23%), Positives = 105/272 (38%), Gaps = 24/272 (8%) Query: 702 KLMASETQLNHLQQSDENXXXXXXXXXXXXXSYNKLQDEANHTQQQFHQAQNELDAAHQQ 761 KL E L +Q S EN + K+ H + Q+E Q+ Sbjct: 76 KLRRLEKDLQSVQASLENALAERNQLTENYQAQEKMVAALQHQLAHYDDIQSEKFVGLQK 135 Query: 762 LAL-FKQNNEELTDKCSNIQNELHDLNRVKTNWENLNTEHNLLQDK--YAQQKEQMQHEH 818 L Q N L+D+ NE+ + +L T + L D+ Y +Q + E Sbjct: 136 LNQELLQENTNLSDRLKQAVNEVAETRPKLVQLNSLVTRNQQLSDQLSYVEQNQAKAIEQ 195 Query: 819 SNLAQI---QAEHELLQESYN-----------KVKAELNEIQITNLNEANAQYQDLLSAY 864 +Q Q HE Q +N ++ AE +++Q L A Q Q + Sbjct: 196 RLASQEKLWQQRHEQEQAQWNSQASQWEEQVRQLTAERDQVQ-QELQTARQQSQSAQTQA 254 Query: 865 ELLQSNHNKLKQELQVLNQVNLEKQQLAQKLHNTHQSLSQTHAELTQLQAAYNNLQAT-P 923 E LQ+ ++L Q+ + Q E+ QL KL+ ++ + +L+ QA Sbjct: 255 ENLQAALDRLGQQEE---QWQGERSQLTAKLNQLEEAQKELALANAELKVKLETTQAEGD 311 Query: 924 PVSDELLEQFNQVQLEKQRL--LQQNLALVHE 953 + E EQ +Q + ++ LQQ LA + E Sbjct: 312 RLKTEKKEQAAALQSAQGQVTQLQQELAALQE 343 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.309 0.125 0.324 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,107 Number of Sequences: 78 Number of extensions: 4717 Number of successful extensions: 188 Number of sequences better than 1.0e-05: 8 Number of HSP's better than 0.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 40 Number of HSP's gapped (non-prelim): 42 length of query: 1033 length of database: 48,235 effective HSP length: 72 effective length of query: 961 effective length of database: 42,619 effective search space: 40956859 effective search space used: 40956859 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 97 (42.0 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SCER-S28-01-000190 ORFP:YBL051C YBL051C, Chr II from 122715-124721, reverse complement (668 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SCER-S28-01-000190 ORFP:YBL051C YBL051C, Chr II from 122715-124... 904 0.0 >SCER-S28-01-000190 ORFP:YBL051C YBL051C, Chr II from 122715-124721, reverse complement Length = 668 Score = 904 bits (2335), Expect = 0.0 Identities = 481/668 (72%), Positives = 481/668 (72%) Query: 1 METSSFEXXXXXXXXXXXXXXXXTETNDQETNQQSIETRDAIDKENGVQTETGENSAKNA 60 METSSFE TETNDQETNQQSIETRDAIDKENGVQTETGENSAKNA Sbjct: 1 METSSFENAPPAAINDAQDNNINTETNDQETNQQSIETRDAIDKENGVQTETGENSAKNA 60 Query: 61 EQNVSSTNLNNAPTNGALDDDVIPNAIVIKNIPFAIKKEQLLDIIEEMDLPLPYAFNYHF 120 EQNVSSTNLNNAPTNGALDDDVIPNAIVIKNIPFAIKKEQLLDIIEEMDLPLPYAFNYHF Sbjct: 61 EQNVSSTNLNNAPTNGALDDDVIPNAIVIKNIPFAIKKEQLLDIIEEMDLPLPYAFNYHF 120 Query: 121 DNGIFRGLAFANFTTPEETTQVITSLNGKEISGRKLKVEYKKMLPQAXXXXXXXXXXXXX 180 DNGIFRGLAFANFTTPEETTQVITSLNGKEISGRKLKVEYKKMLPQA Sbjct: 121 DNGIFRGLAFANFTTPEETTQVITSLNGKEISGRKLKVEYKKMLPQAERERIEREKREKR 180 Query: 181 GQLEEQHRXXXXXXXXXXXXXXXXXXXXXXXXQLFSTLMNGXXXXXXXXXXXXXXXXXXX 240 GQLEEQHR QLFSTLMNG Sbjct: 181 GQLEEQHRSSSNLSLDSLSKMSGSGNNNTSNNQLFSTLMNGINANSMMNSPMNNTINNNS 240 Query: 241 XXXXXXXXXXXXQPSLSAQHTSSSLYQTNVNNQAQMSTERFYAXXXXXXXXXXXXXXXDF 300 QPSLSAQHTSSSLYQTNVNNQAQMSTERFYA DF Sbjct: 241 SNNNNSGNIILNQPSLSAQHTSSSLYQTNVNNQAQMSTERFYAPLPSTSTLPLPPQQLDF 300 Query: 301 NDPDTLEIYSQLLLFKDREKYYYELAYPMGISASHKRIINVLCSYLGLVEVYDPRFIIIR 360 NDPDTLEIYSQLLLFKDREKYYYELAYPMGISASHKRIINVLCSYLGLVEVYDPRFIIIR Sbjct: 301 NDPDTLEIYSQLLLFKDREKYYYELAYPMGISASHKRIINVLCSYLGLVEVYDPRFIIIR 360 Query: 361 RKILDHANLQSHLQQQGQMTSAHPLQPNSTGGSMNRSQSYTSLLQAHXXXXXXXXXXXXX 420 RKILDHANLQSHLQQQGQMTSAHPLQPNSTGGSMNRSQSYTSLLQAH Sbjct: 361 RKILDHANLQSHLQQQGQMTSAHPLQPNSTGGSMNRSQSYTSLLQAHAAAAANSISNQAV 420 Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKISSQGQFSMQPTLTSPKMNIHHSSQYNXX 480 PKISSQGQFSMQPTLTSPKMNIHHSSQYN Sbjct: 421 NNSSNSNTINSNNGNGNNVIINNNSASSTPKISSQGQFSMQPTLTSPKMNIHHSSQYNSA 480 Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXATLTPSSRIPSGYSANHYQINSVNPLLRNSQI 540 ATLTPSSRIPSGYSANHYQINSVNPLLRNSQI Sbjct: 481 DQPQQPQPQTQQNVQSAAQQQQSFLRQQATLTPSSRIPSGYSANHYQINSVNPLLRNSQI 540 Query: 541 SPPNSQIPINSXXXXXXXXXXXXXXXXRVPVAYQNASLSSQQLYNLNGPSSANSQSQLLP 600 SPPNSQIPINS RVPVAYQNASLSSQQLYNLNGPSSANSQSQLLP Sbjct: 541 SPPNSQIPINSQTLSQAQPPAQSQTQQRVPVAYQNASLSSQQLYNLNGPSSANSQSQLLP 600 Query: 601 QHTNGSVHSNFSYQSYHDESMLSAHNLNSADLIYKSLSHSGLDDGLEQGLNRSLSGLDLQ 660 QHTNGSVHSNFSYQSYHDESMLSAHNLNSADLIYKSLSHSGLDDGLEQGLNRSLSGLDLQ Sbjct: 601 QHTNGSVHSNFSYQSYHDESMLSAHNLNSADLIYKSLSHSGLDDGLEQGLNRSLSGLDLQ 660 Query: 661 NQNKKNLW 668 NQNKKNLW Sbjct: 661 NQNKKNLW 668 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.311 0.127 0.350 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,221 Number of Sequences: 78 Number of extensions: 1844 Number of successful extensions: 21 Number of sequences better than 1.0e-05: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 14 Number of HSP's gapped (non-prelim): 1 length of query: 668 length of database: 48,235 effective HSP length: 69 effective length of query: 599 effective length of database: 42,853 effective search space: 25668947 effective search space used: 25668947 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 96 (41.6 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SCER-S28-01-000222 ORFP:YBL081W YBL081W, Chr II from 71860-72966 (368 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SCER-S28-01-000222 ORFP:YBL081W YBL081W, Chr II from 71860-72966 464 e-133 >SCER-S28-01-000222 ORFP:YBL081W YBL081W, Chr II from 71860-72966 Length = 368 Score = 464 bits (1193), Expect = e-133 Identities = 235/368 (63%), Positives = 235/368 (63%) Query: 1 MPGQIISIPFLSQNEDMDKYLLEYRSLKLLHQSSNSFQSHNAPSHQSNYHPHYNHMKXXX 60 MPGQIISIPFLSQNEDMDKYLLEYRSLKLLHQSSNSFQSHNAPSHQSNYHPHYNHMK Sbjct: 1 MPGQIISIPFLSQNEDMDKYLLEYRSLKLLHQSSNSFQSHNAPSHQSNYHPHYNHMKYNN 60 Query: 61 XXXXXXXXXXXXXXXXPHNQAGLQSINRSIPSAPYGAYNQNRANDVPYMNTQKKHHRFSA 120 PHNQAGLQSINRSIPSAPYGAYNQNRANDVPYMNTQKKHHRFSA Sbjct: 61 TGSYYYYNNNNNSSVNPHNQAGLQSINRSIPSAPYGAYNQNRANDVPYMNTQKKHHRFSA 120 Query: 121 XXXXXXXXXXXXXXXTSNPMVTAHLKQTYPQLYYXXXXXXXXXXXXXXXXXXXXXXXXXX 180 TSNPMVTAHLKQTYPQLYY Sbjct: 121 NNNLNQQKYKQYPQYTSNPMVTAHLKQTYPQLYYNSNVNAHNNNNNSNNNNNNNNNSNNN 180 Query: 181 XXLYNQTQFSTRYFXXXXXXXXXXXXXXXXXXXXXXXFEYILPXXXXXXXXXXXXXXXXX 240 LYNQTQFSTRYF FEYILP Sbjct: 181 NNLYNQTQFSTRYFNSNSSPSLTSSTSNSSSPYNQSTFEYILPSTSAASTNLSSSSSNNS 240 Query: 241 MHTNPTTATSTSADLINDLPVGPTSSSLISDLHSPPTVSFLPASQTLLMXXXXXXXIGTN 300 MHTNPTTATSTSADLINDLPVGPTSSSLISDLHSPPTVSFLPASQTLLM IGTN Sbjct: 241 MHTNPTTATSTSADLINDLPVGPTSSSLISDLHSPPTVSFLPASQTLLMSSTTSSSIGTN 300 Query: 301 INPPQHSPSPSQREDFSTAPVXXXXXXXXXXXXXXXGWGSNHMNVXXXXXXXXXRPFGIW 360 INPPQHSPSPSQREDFSTAPV GWGSNHMNV RPFGIW Sbjct: 301 INPPQHSPSPSQREDFSTAPVNMSSSASLLMNDSSLGWGSNHMNVSSSSQPASSRPFGIW 360 Query: 361 NTDMSVWS 368 NTDMSVWS Sbjct: 361 NTDMSVWS 368 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.315 0.128 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,445 Number of Sequences: 78 Number of extensions: 722 Number of successful extensions: 5 Number of sequences better than 1.0e-05: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 2 Number of HSP's gapped (non-prelim): 1 length of query: 368 length of database: 48,235 effective HSP length: 64 effective length of query: 304 effective length of database: 43,243 effective search space: 13145872 effective search space used: 13145872 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 93 (40.4 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SCER-S28-01-000320 ORFP:YBR059C AKL1, Chr II from 356820-360146, reverse complement (1108 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SCER-S28-01-000320 ORFP:YBR059C AKL1, Chr II from 356820-360146... 1778 0.0 SCER-S28-01-000850 ORFP:YDL101C DUN1, Chr IV from 280306-281847... 52 1e-08 >SCER-S28-01-000320 ORFP:YBR059C AKL1, Chr II from 356820-360146, reverse complement Length = 1108 Score = 1778 bits (4605), Expect = 0.0 Identities = 917/1108 (82%), Positives = 917/1108 (82%) Query: 1 MSITNGTSRSVSAMGHPAVERYTPGHIVCVGTHKVEVVNYLAEGGFAQIYVVKFLEYLNE 60 MSITNGTSRSVSAMGHPAVERYTPGHIVCVGTHKVEVVNYLAEGGFAQIYVVKFLEYLNE Sbjct: 1 MSITNGTSRSVSAMGHPAVERYTPGHIVCVGTHKVEVVNYLAEGGFAQIYVVKFLEYLNE 60 Query: 61 FDNTASVPLKIGDVACLKRVLVQDENGLNEMRNEVEVMKKLKGAPNIVQYFDSNASRRRD 120 FDNTASVPLKIGDVACLKRVLVQDENGLNEMRNEVEVMKKLKGAPNIVQYFDSNASRRRD Sbjct: 61 FDNTASVPLKIGDVACLKRVLVQDENGLNEMRNEVEVMKKLKGAPNIVQYFDSNASRRRD 120 Query: 121 GVQGFEVLLLMELCPNKSLLDYMNQRLSTKLTEAEIVKIMYDVALSISQMHYLPVSLIHR 180 GVQGFEVLLLMELCPNKSLLDYMNQRLSTKLTEAEIVKIMYDVALSISQMHYLPVSLIHR Sbjct: 121 GVQGFEVLLLMELCPNKSLLDYMNQRLSTKLTEAEIVKIMYDVALSISQMHYLPVSLIHR 180 Query: 181 DIKIENVLVDAKNNFKLADFGSTSTCFPIVTTHQDIALLTQNIYVHTTPQYRSPEMIDLY 240 DIKIENVLVDAKNNFKLADFGSTSTCFPIVTTHQDIALLTQNIYVHTTPQYRSPEMIDLY Sbjct: 181 DIKIENVLVDAKNNFKLADFGSTSTCFPIVTTHQDIALLTQNIYVHTTPQYRSPEMIDLY 240 Query: 241 RCLPINEKSDIWALGVFLYKLLFFTTPFEMTGQFAILHSKYEFPVNKYSSKLINLIIIML 300 RCLPINEKSDIWALGVFLYKLLFFTTPFEMTGQFAILHSKYEFPVNKYSSKLINLIIIML Sbjct: 241 RCLPINEKSDIWALGVFLYKLLFFTTPFEMTGQFAILHSKYEFPVNKYSSKLINLIIIML 300 Query: 301 AENPNLRPNIYQVLYHLCEILNVEVPIEDKYAEGAYNFSKYTQFQNKXXXXXXXXXXXXX 360 AENPNLRPNIYQVLYHLCEILNVEVPIEDKYAEGAYNFSKYTQFQNK Sbjct: 301 AENPNLRPNIYQVLYHLCEILNVEVPIEDKYAEGAYNFSKYTQFQNKLQNVQLQMYQLQQ 360 Query: 361 KKIMQNNKLSDSEENLLNDMFLSSFEISSKLPMNASDGHAAVSRIPSQNVGQELEEEKES 420 KKIMQNNKLSDSEENLLNDMFLSSFEISSKLPMNASDGHAAVSRIPSQNVGQELEEEKES Sbjct: 361 KKIMQNNKLSDSEENLLNDMFLSSFEISSKLPMNASDGHAAVSRIPSQNVGQELEEEKES 420 Query: 421 QSDQRKSTLSEDKXXXXXXXXXXXXXXXXPQEINTIQSPGIEDKSIFENKTPGELYYPSV 480 QSDQRKSTLSEDK PQEINTIQSPGIEDKSIFENKTPGELYYPSV Sbjct: 421 QSDQRKSTLSEDKSSRTTSNANSSGTANNPQEINTIQSPGIEDKSIFENKTPGELYYPSV 480 Query: 481 SELDTYLDKELVKQSSDPTISEQSPRLNTQSLPXXXXXXXXXXXXXXXXXXXXXGAATIG 540 SELDTYLDKELVKQSSDPTISEQSPRLNTQSLP GAATIG Sbjct: 481 SELDTYLDKELVKQSSDPTISEQSPRLNTQSLPQRQKSTSSYSSGGRSMKSTSYGAATIG 540 Query: 541 SDEALANEKTAGINKMKQHKSNNPFPKMNVAYHSTNELSNDASNFFLEEXXXXXXXXXXX 600 SDEALANEKTAGINKMKQHKSNNPFPKMNVAYHSTNELSNDASNFFLEE Sbjct: 541 SDEALANEKTAGINKMKQHKSNNPFPKMNVAYHSTNELSNDASNFFLEEQQQGQRYQQAQ 600 Query: 601 XXXXXXXXXFPDESXXXXXXXXXXXXXXXPKGPANYSQRNFYTGRDRSNKPMQLGGTIAG 660 FPDES PKGPANYSQRNFYTGRDRSNKPMQLGGTIAG Sbjct: 601 NQTGTQGNTFPDESQYQSRVEQQQQQQDQPKGPANYSQRNFYTGRDRSNKPMQLGGTIAG 660 Query: 661 DSGNRRVNFQNISQNYATNSQSGYLPSQNSPAIPMVRPVISXXXXXXXXXXXXXXXXXXX 720 DSGNRRVNFQNISQNYATNSQSGYLPSQNSPAIPMVRPVIS Sbjct: 661 DSGNRRVNFQNISQNYATNSQSGYLPSQNSPAIPMVRPVISMNQQQAQQIQAQQLQAQQM 720 Query: 721 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTYVSDRTNHTTEDMRNAQGGEPPILAG 780 GTYVSDRTNHTTEDMRNAQGGEPPILAG Sbjct: 721 QAKQQMQAKQQMQVQQQLQVQQQMQIQNANNNGTYVSDRTNHTTEDMRNAQGGEPPILAG 780 Query: 781 NSANEPMHSSSKNEALLIELSPLKEDAGKQSFQDTNEPQTGGIEDAGGSGTIKGSNNNRN 840 NSANEPMHSSSKNEALLIELSPLKEDAGKQSFQDTNEPQTGGIEDAGGSGTIKGSNNNRN Sbjct: 781 NSANEPMHSSSKNEALLIELSPLKEDAGKQSFQDTNEPQTGGIEDAGGSGTIKGSNNNRN 840 Query: 841 GVLNLSLNEMDLSRDDTGXXXXXXXXXXXXXXIQQAKLSGRKGSSKRNNYSTDELGDSMV 900 GVLNLSLNEMDLSRDDTG IQQAKLSGRKGSSKRNNYSTDELGDSMV Sbjct: 841 GVLNLSLNEMDLSRDDTGAAVSSFSSSSSSASIQQAKLSGRKGSSKRNNYSTDELGDSMV 900 Query: 901 SSESIDIDLDDARRGKTAERRPLHNERGHKDQARSSDASKSNQFKSKDFSSVSTRQPRQS 960 SSESIDIDLDDARRGKTAERRPLHNERGHKDQARSSDASKSNQFKSKDFSSVSTRQPRQS Sbjct: 901 SSESIDIDLDDARRGKTAERRPLHNERGHKDQARSSDASKSNQFKSKDFSSVSTRQPRQS 960 Query: 961 LDLNFQEVNLSSPTLTQEHRNKNDSPAPNSHHSYRVSPHASTAITENKRHSTGHELSTRS 1020 LDLNFQEVNLSSPTLTQEHRNKNDSPAPNSHHSYRVSPHASTAITENKRHSTGHELSTRS Sbjct: 961 LDLNFQEVNLSSPTLTQEHRNKNDSPAPNSHHSYRVSPHASTAITENKRHSTGHELSTRS 1020 Query: 1021 NGKHETHRTGSKQRHDLERYRHXXXXXXXXXXXXXXXXXXEMRKSFARARQSLDLEXXXX 1080 NGKHETHRTGSKQRHDLERYRH EMRKSFARARQSLDLE Sbjct: 1021 NGKHETHRTGSKQRHDLERYRHSKDKDSNSSITISTSTPSEMRKSFARARQSLDLERVRR 1080 Query: 1081 XXXXXXXXXXXXXXXXXXXFFSVFRSEK 1108 FFSVFRSEK Sbjct: 1081 EAMASSASSSGGSNGKRRSFFSVFRSEK 1108 >SCER-S28-01-000850 ORFP:YDL101C DUN1, Chr IV from 280306-281847, reverse complement Length = 513 Score = 51.6 bits (122), Expect = 1e-08 Identities = 62/251 (24%), Positives = 112/251 (44%), Gaps = 29/251 (11%) Query: 84 DENGLNEMRNEVEVMKKLKGAPNIVQYFDSNASR-RRDGVQGFEVLLLMELCPNKSLLDY 142 D+ + R E ++ +++ PNIV DS + +Q + L++E + L + Sbjct: 238 DQKKNKQFREETNILMRVQH-PNIVNLLDSFVEPISKSQIQKY---LVLEKIDDGELFER 293 Query: 143 MNQRLSTKLTEAEIVKIMYDVALSISQMHYLPVSLIHRDIKIENVLV-----DAKNNFKL 197 + ++ T L + E + + + +H ++IHRDIK EN+L+ + + +L Sbjct: 294 IVRK--TCLRQDESKALFKQLLTGLKYLH--EQNIIHRDIKPENILLNITRRENPSQVQL 349 Query: 198 ADFGSTSTCFPIVTTHQDIALLTQNI-YVHT---TPQYRSPEMIDLYRCLPINEKSDIWA 253 + + +A T + + +T TP Y +PE++ K D+W+ Sbjct: 350 GPWDEDEIDIQVKIADFGLAKFTGEMQFTNTLCGTPSYVAPEVLTK---KGYTSKVDLWS 406 Query: 254 LGVFLYKLLFFTTPF-EMTG----QFAILHSKYEFPV---NKYSSKLINLIIIMLAENPN 305 GV LY L PF + G + IL +KY F +K +++LI +L NP+ Sbjct: 407 AGVILYVCLCGFPPFSDQLGPPSLKEQILQAKYAFYSPYWDKIDDSVLHLISNLLVLNPD 466 Query: 306 LRPNIYQVLYH 316 R NI + L H Sbjct: 467 ERYNIDEALNH 477 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.312 0.129 0.359 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,865 Number of Sequences: 78 Number of extensions: 3781 Number of successful extensions: 23 Number of sequences better than 1.0e-05: 2 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 19 Number of HSP's gapped (non-prelim): 3 length of query: 1108 length of database: 48,235 effective HSP length: 73 effective length of query: 1035 effective length of database: 42,541 effective search space: 44029935 effective search space used: 44029935 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 98 (42.4 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SCER-S28-01-000752 ORFP:YDL005C MED2, Chr IV from 441010-442305, reverse complement (431 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SCER-S28-01-000752 ORFP:YDL005C MED2, Chr IV from 441010-442305... 356 e-101 >SCER-S28-01-000752 ORFP:YDL005C MED2, Chr IV from 441010-442305, reverse complement Length = 431 Score = 356 bits (913), Expect = e-101 Identities = 192/261 (73%), Positives = 192/261 (73%) Query: 1 MVVQNSPVSSVHTANFSERGSNTRTMTYKNKLTVCFDDILKVGAEMMMQQQLKNVQLDSY 60 MVVQNSPVSSVHTANFSERGSNTRTMTYKNKLTVCFDDILKVGAEMMMQQQLKNVQLDSY Sbjct: 1 MVVQNSPVSSVHTANFSERGSNTRTMTYKNKLTVCFDDILKVGAEMMMQQQLKNVQLDSY 60 Query: 61 LVNGFSQSQQKLLKEKVKLFHGILDDLETSLSQSSSYLETLTALGXXXXXXXXXXXXXXX 120 LVNGFSQSQQKLLKEKVKLFHGILDDLETSLSQSSSYLETLTALG Sbjct: 61 LVNGFSQSQQKLLKEKVKLFHGILDDLETSLSQSSSYLETLTALGKEKEKEREEAEKKRA 120 Query: 121 XQENMRKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGLNFSTTAPANTTDANGSKEN 180 QENMRKV GLGLNFSTTAPANTTDANGSKEN Sbjct: 121 EQENMRKVREQEELKKRQELEEASQQQQLQQNSKEKNGLGLNFSTTAPANTTDANGSKEN 180 Query: 181 YXXXXXXXXXXXXXXEXXXXXXXXXXFSPLTTTRIQSQQAQPSDVMFNDLNSMDISMFSG 240 Y E FSPLTTTRIQSQQAQPSDVMFNDLNSMDISMFSG Sbjct: 181 YQELGSLQSSSQTQLENANAANNGAAFSPLTTTRIQSQQAQPSDVMFNDLNSMDISMFSG 240 Query: 241 LDSTGFDSTAFNATVDETKGF 261 LDSTGFDSTAFNATVDETKGF Sbjct: 241 LDSTGFDSTAFNATVDETKGF 261 Score = 108 bits (271), Expect = 2e-26 Identities = 54/66 (81%), Positives = 54/66 (81%) Query: 366 SITTGNDNENIVNNDLPTTVVSXXXXXXXXXXXXEEYLTLNDFNDLNIDWSTTGDNGELD 425 SITTGNDNENIVNNDLPTTVVS EEYLTLNDFNDLNIDWSTTGDNGELD Sbjct: 366 SITTGNDNENIVNNDLPTTVVSNPGDNPPPADNGEEYLTLNDFNDLNIDWSTTGDNGELD 425 Query: 426 LSGFNI 431 LSGFNI Sbjct: 426 LSGFNI 431 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.310 0.127 0.345 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,354 Number of Sequences: 78 Number of extensions: 913 Number of successful extensions: 6 Number of sequences better than 1.0e-05: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 2 Number of HSP's gapped (non-prelim): 3 length of query: 431 length of database: 48,235 effective HSP length: 65 effective length of query: 366 effective length of database: 43,165 effective search space: 15798390 effective search space used: 15798390 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 94 (40.8 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SCER-S28-01-000782 ORFP:YDL035C GPR1, Chr IV from 389168-392053, reverse complement (961 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SCER-S28-01-000782 ORFP:YDL035C GPR1, Chr IV from 389168-392053... 1689 0.0 >SCER-S28-01-000782 ORFP:YDL035C GPR1, Chr IV from 389168-392053, reverse complement Length = 961 Score = 1689 bits (4373), Expect = 0.0 Identities = 840/961 (87%), Positives = 840/961 (87%) Query: 1 MITEGFPPNLNALKGSSLLEKRVDSLRQLNTTTVNQLLGLPGMTSTFTAPQLLQLRIIAI 60 MITEGFPPNLNALKGSSLLEKRVDSLRQLNTTTVNQLLGLPGMTSTFTAPQLLQLRIIAI Sbjct: 1 MITEGFPPNLNALKGSSLLEKRVDSLRQLNTTTVNQLLGLPGMTSTFTAPQLLQLRIIAI 60 Query: 61 TASAVSLIAGCLGMFFLSKMDKRRKVFRHDLIAFLIICDFLKAFILMIYPMIILINNSVY 120 TASAVSLIAGCLGMFFLSKMDKRRKVFRHDLIAFLIICDFLKAFILMIYPMIILINNSVY Sbjct: 61 TASAVSLIAGCLGMFFLSKMDKRRKVFRHDLIAFLIICDFLKAFILMIYPMIILINNSVY 120 Query: 121 ATPAFFNTLGWFTAFAIEGADMXXXXXXXXXXXXXXKPNWKWRNKRSGNMEGGLYKKRSY 180 ATPAFFNTLGWFTAFAIEGADM KPNWKWRNKRSGNMEGGLYKKRSY Sbjct: 121 ATPAFFNTLGWFTAFAIEGADMAIMIFAIHFAILIFKPNWKWRNKRSGNMEGGLYKKRSY 180 Query: 181 IWPITALVPAILASLAFINYNKLNDDSDTTIILDNNNYNFPDSPRQGGYKPWSAWCYLPP 240 IWPITALVPAILASLAFINYNKLNDDSDTTIILDNNNYNFPDSPRQGGYKPWSAWCYLPP Sbjct: 181 IWPITALVPAILASLAFINYNKLNDDSDTTIILDNNNYNFPDSPRQGGYKPWSAWCYLPP 240 Query: 241 KPYWYKIVLSWGPRYFIIIFIFAVYLSIYIFITSESKRIKAQIGDFNHNVLXXXXXXXXL 300 KPYWYKIVLSWGPRYFIIIFIFAVYLSIYIFITSESKRIKAQIGDFNHNVL L Sbjct: 241 KPYWYKIVLSWGPRYFIIIFIFAVYLSIYIFITSESKRIKAQIGDFNHNVLEEEKEKKKL 300 Query: 301 FGLGHWGKAKWYFRSYFKXXXXXXXXXXKNFFTISFIDPNEETDDSGSSNGTFNFGESSN 360 FGLGHWGKAKWYFRSYFK KNFFTISFIDPNEETDDSGSSNGTFNFGESSN Sbjct: 301 FGLGHWGKAKWYFRSYFKLPLLHLLRNLKNFFTISFIDPNEETDDSGSSNGTFNFGESSN 360 Query: 361 EIPTLFRKTNTGSDENVSASGGVRLLDYNSAKPLDMSKYAMSEQPDLERNNPFDCENDIT 420 EIPTLFRKTNTGSDENVSASGGVRLLDYNSAKPLDMSKYAMSEQPDLERNNPFDCENDIT Sbjct: 361 EIPTLFRKTNTGSDENVSASGGVRLLDYNSAKPLDMSKYAMSEQPDLERNNPFDCENDIT 420 Query: 421 LNPSELVSKQKEHKVTFSVENEGLDTRKSSMLGHQTFSCQNSLESPLAMYDNKNDNSDIT 480 LNPSELVSKQKEHKVTFSVENEGLDTRKSSMLGHQTFSCQNSLESPLAMYDNKNDNSDIT Sbjct: 421 LNPSELVSKQKEHKVTFSVENEGLDTRKSSMLGHQTFSCQNSLESPLAMYDNKNDNSDIT 480 Query: 481 SNIKEKGGIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540 SNIKEKGGII Sbjct: 481 SNIKEKGGIINNNSNNDDDDNNNNNDNDNDNNNSNNNNNNNNNNNNNNNNNNNNNNNNNN 540 Query: 541 XXXXXXXXXXXXXXXXXXPADNIPTLSNEAFTPSQQFSQERVNNNADRCENSSFTNVQQH 600 PADNIPTLSNEAFTPSQQFSQERVNNNADRCENSSFTNVQQH Sbjct: 541 NNNNSNNIKNNVDNNNTNPADNIPTLSNEAFTPSQQFSQERVNNNADRCENSSFTNVQQH 600 Query: 601 FQAQTYKQMKKRRAQIQKNLRAIFIYPLSYIGIWLFPIIADALQYNHEIKHGPTMWVTYI 660 FQAQTYKQMKKRRAQIQKNLRAIFIYPLSYIGIWLFPIIADALQYNHEIKHGPTMWVTYI Sbjct: 601 FQAQTYKQMKKRRAQIQKNLRAIFIYPLSYIGIWLFPIIADALQYNHEIKHGPTMWVTYI 660 Query: 661 DTCVRPLSCLVDVIVYLFKEKPWNYSWAKTESKYLIEKYILKGELGEKEILKFCHSNWGK 720 DTCVRPLSCLVDVIVYLFKEKPWNYSWAKTESKYLIEKYILKGELGEKEILKFCHSNWGK Sbjct: 661 DTCVRPLSCLVDVIVYLFKEKPWNYSWAKTESKYLIEKYILKGELGEKEILKFCHSNWGK 720 Query: 721 RGWYYRGKWKKRKCWKYSTNPLKRILWFVERFFKQLFELKLHFSFYDNCDDFEYWENYYS 780 RGWYYRGKWKKRKCWKYSTNPLKRILWFVERFFKQLFELKLHFSFYDNCDDFEYWENYYS Sbjct: 721 RGWYYRGKWKKRKCWKYSTNPLKRILWFVERFFKQLFELKLHFSFYDNCDDFEYWENYYS 780 Query: 781 AKDSNDNKRTESDETKTNSSDRSLPSNSLELQAMLNNITAEEVEVPLFWRIIHHIPMLGG 840 AKDSNDNKRTESDETKTNSSDRSLPSNSLELQAMLNNITAEEVEVPLFWRIIHHIPMLGG Sbjct: 781 AKDSNDNKRTESDETKTNSSDRSLPSNSLELQAMLNNITAEEVEVPLFWRIIHHIPMLGG 840 Query: 841 IDLDELNRLLKIRYNNDHFSLPGLKFALNQNKSHDKHQDVSTNSMVKSSFFSSNIVTNDD 900 IDLDELNRLLKIRYNNDHFSLPGLKFALNQNKSHDKHQDVSTNSMVKSSFFSSNIVTNDD Sbjct: 841 IDLDELNRLLKIRYNNDHFSLPGLKFALNQNKSHDKHQDVSTNSMVKSSFFSSNIVTNDD 900 Query: 901 ENSIEEDKNLRYSDASASENYLVKXXXXXXXXXXXXEAQXXXXXXXXXGIDLIAFLRNGP 960 ENSIEEDKNLRYSDASASENYLVK EAQ GIDLIAFLRNGP Sbjct: 901 ENSIEEDKNLRYSDASASENYLVKPTIPGTTPDPIIEAQNDNDSSDSSGIDLIAFLRNGP 960 Query: 961 L 961 L Sbjct: 961 L 961 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.319 0.136 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,980 Number of Sequences: 78 Number of extensions: 3854 Number of successful extensions: 32 Number of sequences better than 1.0e-05: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 21 Number of HSP's gapped (non-prelim): 10 length of query: 961 length of database: 48,235 effective HSP length: 71 effective length of query: 890 effective length of database: 42,697 effective search space: 38000330 effective search space used: 38000330 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 97 (42.0 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SCER-S28-01-000806 ORFP:YDL058W USO1, Chr IV from 345664-351036 (1790 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SCER-S28-01-000806 ORFP:YDL058W USO1, Chr IV from 345664-351036 3117 0.0 SCER-S28-01-002651 ORFP:YHR023W MYO1, Chr VIII from 151657-157443 132 9e-33 MGEN-G37-01-000221 MG218 cytadherence accessory protein (hmw2) 131 2e-32 SCER-S28-01-001306 ORFP:YDR285W ZIP1, Chr IV from 1032427-1035054 124 3e-30 MPNE-M12-01-000474 gi|13508213|ref|NP_110162.1| coiled coil pro... 95 2e-21 MGEN-G37-01-000335 MG328 conserved hypothetical protein 84 3e-18 SYNE-PCC-01-000727 sll1120 67 4e-13 SYNE-PCC-01-000943 sll1424 50 5e-08 MJAN-DSM-01-001277 MJ1254 hypothetical protein 49 2e-07 SCER-S28-01-001667 ORFP:YER008C SEC3, Chr V from 167807-171817,... 47 4e-07 SYNE-PCC-01-001071 sll1583 47 7e-07 MGEN-G37-01-000317 MG312 cytadherence accessory protein (hmw1) 45 3e-06 >SCER-S28-01-000806 ORFP:YDL058W USO1, Chr IV from 345664-351036 Length = 1790 Score = 3117 bits (8082), Expect = 0.0 Identities = 1651/1790 (92%), Positives = 1651/1790 (92%) Query: 1 MDIIQGLIQQPKIQSVDETIPTLCDRVENSTLISDRRSAVLGLKAFSRQYRESVIASGLK 60 MDIIQGLIQQPKIQSVDETIPTLCDRVENSTLISDRRSAVLGLKAFSRQYRESVIASGLK Sbjct: 1 MDIIQGLIQQPKIQSVDETIPTLCDRVENSTLISDRRSAVLGLKAFSRQYRESVIASGLK 60 Query: 61 PLLNTLKRDYMDEDSVKAILETILILFIRGDGHDDLTRGWISQQSRLQNGKYPSPLVMKQ 120 PLLNTLKRDYMDEDSVKAILETILILFIRGDGHDDLTRGWISQQSRLQNGKYPSPLVMKQ Sbjct: 61 PLLNTLKRDYMDEDSVKAILETILILFIRGDGHDDLTRGWISQQSRLQNGKYPSPLVMKQ 120 Query: 121 EKEQVDQFSLWIADALTQSEDLIHLLVEFWEIDNFHIRLYTIQLLEAVMATRPLKARSAL 180 EKEQVDQFSLWIADALTQSEDLIHLLVEFWEIDNFHIRLYTIQLLEAVMATRPLKARSAL Sbjct: 121 EKEQVDQFSLWIADALTQSEDLIHLLVEFWEIDNFHIRLYTIQLLEAVMATRPLKARSAL 180 Query: 181 ISLPTSISTMVSLLDDMHEPIRDEAILLLMAVVNDSPHVQKLVAFENIFERLFSIIEEEG 240 ISLPTSISTMVSLLDDMHEPIRDEAILLLMAVVNDSPHVQKLVAFENIFERLFSIIEEEG Sbjct: 181 ISLPTSISTMVSLLDDMHEPIRDEAILLLMAVVNDSPHVQKLVAFENIFERLFSIIEEEG 240 Query: 241 GLRGSLVVNDCLSLINNILKYNTSNQTLFLETGNLPKLAHLLSEPISQDEVFFWNDQRIV 300 GLRGSLVVNDCLSLINNILKYNTSNQTLFLETGNLPKLAHLLSEPISQDEVFFWNDQRIV Sbjct: 241 GLRGSLVVNDCLSLINNILKYNTSNQTLFLETGNLPKLAHLLSEPISQDEVFFWNDQRIV 300 Query: 301 NINTALDIVSLTVEPGNTVTTKHQNALLDSSVLMVVLRLAFFHNIPKKVRPVALLTAANM 360 NINTALDIVSLTVEPGNTVTTKHQNALLDSSVLMVVLRLAFFHNIPKKVRPVALLTAANM Sbjct: 301 NINTALDIVSLTVEPGNTVTTKHQNALLDSSVLMVVLRLAFFHNIPKKVRPVALLTAANM 360 Query: 361 VRSNEHAQLEFSKIDVPYFDPSLPVNSTANGGPIKLIPVVSILINWMLYANSVHTFDTRV 420 VRSNEHAQLEFSKIDVPYFDPSLPVNSTANGGPIKLIPVVSILINWMLYANSVHTFDTRV Sbjct: 361 VRSNEHAQLEFSKIDVPYFDPSLPVNSTANGGPIKLIPVVSILINWMLYANSVHTFDTRV 420 Query: 421 ACSRLLKAYFMDNFDLQRDFLLKQVQLCNNSTNNVGDNAKENXXXXXXXXXXXXXXXXXX 480 ACSRLLKAYFMDNFDLQRDFLLKQVQLCNNSTNNVGDNAKEN Sbjct: 421 ACSRLLKAYFMDNFDLQRDFLLKQVQLCNNSTNNVGDNAKENGGSNKSDKESDSDKDTDG 480 Query: 481 XXXXXYEGSFKANLFEVLLNYDAELNLNPXXXXXXXXXXXXXXQQDHKYSEELREITRNV 540 YEGSFKANLFEVLLNYDAELNLNP QQDHKYSEELREITRNV Sbjct: 481 KDGTEYEGSFKANLFEVLLNYDAELNLNPFKLFFTTDIFMFFFQQDHKYSEELREITRNV 540 Query: 541 TTGNDLEDEEPLKAIQTISELLTTSLTAADIRIPISYLTFLIYWLFGDFKATNDFLSDKS 600 TTGNDLEDEEPLKAIQTISELLTTSLTAADIRIPISYLTFLIYWLFGDFKATNDFLSDKS Sbjct: 541 TTGNDLEDEEPLKAIQTISELLTTSLTAADIRIPISYLTFLIYWLFGDFKATNDFLSDKS 600 Query: 601 VIKSLLSFSYQIQDEDVTIKCLVTMLLGVAYEFSSKESPFPRKEYFEFITKTLGKDNYAS 660 VIKSLLSFSYQIQDEDVTIKCLVTMLLGVAYEFSSKESPFPRKEYFEFITKTLGKDNYAS Sbjct: 601 VIKSLLSFSYQIQDEDVTIKCLVTMLLGVAYEFSSKESPFPRKEYFEFITKTLGKDNYAS 660 Query: 661 RIKQFKKDSYFSKVDMNEDSILTPELDETGLPKVYFSTYFIQLFNENIYRIRTALSHDPD 720 RIKQFKKDSYFSKVDMNEDSILTPELDETGLPKVYFSTYFIQLFNENIYRIRTALSHDPD Sbjct: 661 RIKQFKKDSYFSKVDMNEDSILTPELDETGLPKVYFSTYFIQLFNENIYRIRTALSHDPD 720 Query: 721 EEPINKISFEEVEKLQRQCTKLKGEITSLQTETESTHENLTEKLIALTNEHKELDEKYQI 780 EEPINKISFEEVEKLQRQCTKLKGEITSLQTETESTHENLTEKLIALTNEHKELDEKYQI Sbjct: 721 EEPINKISFEEVEKLQRQCTKLKGEITSLQTETESTHENLTEKLIALTNEHKELDEKYQI 780 Query: 781 LNSSHSSLKENFSILETELKNVRDSLDEMTQLRDVLETKDKENQTALLEYKSTIHKQEDS 840 LNSSHSSLKENFSILETELKNVRDSLDEMTQLRDVLETKDKENQTALLEYKSTIHKQEDS Sbjct: 781 LNSSHSSLKENFSILETELKNVRDSLDEMTQLRDVLETKDKENQTALLEYKSTIHKQEDS 840 Query: 841 IKTLEKGLETILSQKKKAEDGINKMGKDLFALSREMQAVEENCKNLQKEKDKSNVNHQKE 900 IKTLEKGLETILSQKKKAEDGINKMGKDLFALSREMQAVEENCKNLQKEKDKSNVNHQKE Sbjct: 841 IKTLEKGLETILSQKKKAEDGINKMGKDLFALSREMQAVEENCKNLQKEKDKSNVNHQKE 900 Query: 901 TKSLKEDIAAKITEIKAINENLEEMKIQCNNLSKEKEHISKELVEYKSRFQSHDNLVAKL 960 TKSLKEDIAAKITEIKAINENLEEMKIQCNNLSKEKEHISKELVEYKSRFQSHDNLVAKL Sbjct: 901 TKSLKEDIAAKITEIKAINENLEEMKIQCNNLSKEKEHISKELVEYKSRFQSHDNLVAKL 960 Query: 961 TEKLKSLANNYKDMQAENESLIKAVEESKNESSIQLSNLQNKIDSMSQEKENFQIERGSI 1020 TEKLKSLANNYKDMQAENESLIKAVEESKNESSIQLSNLQNKIDSMSQEKENFQIERGSI Sbjct: 961 TEKLKSLANNYKDMQAENESLIKAVEESKNESSIQLSNLQNKIDSMSQEKENFQIERGSI 1020 Query: 1021 EKNIEQLKKTISDLEQTXXXXXXXXXXXXXXXXXQISLLKEKLETATTANDENVNKISEL 1080 EKNIEQLKKTISDLEQT QISLLKEKLETATTANDENVNKISEL Sbjct: 1021 EKNIEQLKKTISDLEQTKEEIISKSDSSKDEYESQISLLKEKLETATTANDENVNKISEL 1080 Query: 1081 TKTREELEAELAAYKNLKNELETKLETSEKALXXXXXXXXXXXXXXIQLEKEATETKQQL 1140 TKTREELEAELAAYKNLKNELETKLETSEKAL IQLEKEATETKQQL Sbjct: 1081 TKTREELEAELAAYKNLKNELETKLETSEKALKEVKENEEHLKEEKIQLEKEATETKQQL 1140 Query: 1141 NSLRANLESLEKEHEDLAAQLKKYEEQIANKERQYNEEISQLNDEITSTQQENESIKKKN 1200 NSLRANLESLEKEHEDLAAQLKKYEEQIANKERQYNEEISQLNDEITSTQQENESIKKKN Sbjct: 1141 NSLRANLESLEKEHEDLAAQLKKYEEQIANKERQYNEEISQLNDEITSTQQENESIKKKN 1200 Query: 1201 DELEGEVKAMKSTSEEQSNLKKSEIDALNLQIKELKKKNETNEASLLESIKSVESETVKI 1260 DELEGEVKAMKSTSEEQSNLKKSEIDALNLQIKELKKKNETNEASLLESIKSVESETVKI Sbjct: 1201 DELEGEVKAMKSTSEEQSNLKKSEIDALNLQIKELKKKNETNEASLLESIKSVESETVKI 1260 Query: 1261 KELQDECNFKEKEVSELEDKLKASEDKNSKYLELQKESEKIKEELDAKTTELKIQLEKIT 1320 KELQDECNFKEKEVSELEDKLKASEDKNSKYLELQKESEKIKEELDAKTTELKIQLEKIT Sbjct: 1261 KELQDECNFKEKEVSELEDKLKASEDKNSKYLELQKESEKIKEELDAKTTELKIQLEKIT 1320 Query: 1321 NXXXXXXXXXXXXXXXXXXXXXXRKNAEEQLEKLKNEIQIKNQAFEKERKLLNEGSSTIT 1380 N RKNAEEQLEKLKNEIQIKNQAFEKERKLLNEGSSTIT Sbjct: 1321 NLSKAKEKSESELSRLKKTSSEERKNAEEQLEKLKNEIQIKNQAFEKERKLLNEGSSTIT 1380 Query: 1381 QEYSEKINTLEDELIRLQNENELKAKEIDNTRSELEKVSLSNDELLEEKQNTIKSLQDEI 1440 QEYSEKINTLEDELIRLQNENELKAKEIDNTRSELEKVSLSNDELLEEKQNTIKSLQDEI Sbjct: 1381 QEYSEKINTLEDELIRLQNENELKAKEIDNTRSELEKVSLSNDELLEEKQNTIKSLQDEI 1440 Query: 1441 LSYKDKITRNDEKLLSIERDNKRDLESLKEQLRAAQESXXXXXXXXXXXXXXXXXXXXXX 1500 LSYKDKITRNDEKLLSIERDNKRDLESLKEQLRAAQES Sbjct: 1441 LSYKDKITRNDEKLLSIERDNKRDLESLKEQLRAAQESKAKVEEGLKKLEEESSKEKAEL 1500 Query: 1501 XXXXXXXXXXXXTIESNETELKSSMETIRKSDEKLEQSKKSAEEDIKNLQHEKSDLISRI 1560 TIESNETELKSSMETIRKSDEKLEQSKKSAEEDIKNLQHEKSDLISRI Sbjct: 1501 EKSKEMMKKLESTIESNETELKSSMETIRKSDEKLEQSKKSAEEDIKNLQHEKSDLISRI 1560 Query: 1561 NESEKDIEELKSKLRIEAKSGSELETVKQELNNAQEKIRINAEENTVLKSKLEDIERELK 1620 NESEKDIEELKSKLRIEAKSGSELETVKQELNNAQEKIRINAEENTVLKSKLEDIERELK Sbjct: 1561 NESEKDIEELKSKLRIEAKSGSELETVKQELNNAQEKIRINAEENTVLKSKLEDIERELK 1620 Query: 1621 DKQAEIKSNQEEKELLTSRLKELEQELDSTQQKAQKSEEERRAEVRKFQVEKSQLDEKAM 1680 DKQAEIKSNQEEKELLTSRLKELEQELDSTQQKAQKSEEERRAEVRKFQVEKSQLDEKAM Sbjct: 1621 DKQAEIKSNQEEKELLTSRLKELEQELDSTQQKAQKSEEERRAEVRKFQVEKSQLDEKAM 1680 Query: 1681 LLETKYNDLVNKEQAWKRDEDTVKKTTDSQRQEIEKLAKELDNLKAENSKLKEANEDRSE 1740 LLETKYNDLVNKEQAWKRDEDTVKKTTDSQRQEIEKLAKELDNLKAENSKLKEANEDRSE Sbjct: 1681 LLETKYNDLVNKEQAWKRDEDTVKKTTDSQRQEIEKLAKELDNLKAENSKLKEANEDRSE 1740 Query: 1741 IDDLMLLVTDLDEKNAKYRSKLKDLGVEISSXXXXXXXXXXXXXXXGQVA 1790 IDDLMLLVTDLDEKNAKYRSKLKDLGVEISS GQVA Sbjct: 1741 IDDLMLLVTDLDEKNAKYRSKLKDLGVEISSDEEDDEEDDEEDEEEGQVA 1790 >SCER-S28-01-002651 ORFP:YHR023W MYO1, Chr VIII from 151657-157443 Length = 1928 Score = 132 bits (332), Expect = 9e-33 Identities = 217/1100 (19%), Positives = 421/1100 (38%), Gaps = 156/1100 (14%) Query: 636 KESPFPRKEYFEFITKTLGKDNYASRIKQFKKDSYFSKVDMNEDSILTPELDETGLPKVY 695 KE P+ F I L N +R K+F + K D+ E L+E V Sbjct: 839 KEDPW--FNLFIRIKPLLTSSNDMTRTKKFNEQINKLKNDLQEMESKKKFLEEKNQKTVN 896 Query: 696 FSTYFIQLFNENIYRIRTALSHDPDEEPINKISFEEVEKLQRQCTKLKGEITSLQTETES 755 L N+ +R +E +N++ E LQ+Q L E + E Sbjct: 897 ELENTQDLLNQEKENLRK------NESLLNRVKTSS-ETLQKQFDDLVSEKDEISREKLE 949 Query: 756 THENLTE---KLIALTNEHKELDEKYQILNSSHSSLKENFSILETELKNVRDSL------ 806 +NL E K+ L +E + + L+S ++ L + S L ++ + S Sbjct: 950 VAQNLEEAHQKIQGLQETIREREATLEKLHSKNNELIKQISDLNCDISKEQSSQSLIKES 1009 Query: 807 -----DEMTQLRDVLETKDKENQTALLEYKSTIHKQEDSIKTLEKGLETILSQKKKAEDG 861 +E+ +L+DV+ +K++E ++ + S+ + + TLEK +S+ + Sbjct: 1010 KLKLENEIKRLKDVINSKEEEIKSFNDKLSSSEEDLDIKLVTLEKNCNIAMSRLQSLVTE 1069 Query: 862 INKMGKDLFALSREMQAVEENCKNLQKE--KDKSNV-NHQKETKSLKEDIAAKITEIKAI 918 + + +E A+ KN + E K K + NH+KE + + ++E I Sbjct: 1070 NSDLRSKNENFKKEKAALNNQLKNKESELLKMKEKIDNHKKELATFSKQRDDAVSEHGKI 1129 Query: 919 NENLEEMKIQC----NNLSKEKEHISKELVEYKSRFQSHDN-------------LVAKLT 961 L+E +IQ +N K KE S E K + Q N L A+L+ Sbjct: 1130 TAELKETRIQLTEYKSNYQKIKEEYSNFQRETKEQEQKKRNSLVESLNDSKIKELEARLS 1189 Query: 962 EKL-------KSLANN--------------YKDMQAENESLIKAVEESKNESSIQLSNLQ 1000 +++ K ++ N Y D + E +IK + + + NL+ Sbjct: 1190 QEISLNQYLNKRISGNSVETNISSTRRSTSYSDDPLDKEDIIKKYYDLQLAFTEITRNLE 1249 Query: 1001 NKIDSMSQEKENF--------------QIERGSIEKNIEQLKKTISDLEQTXXXXXXXXX 1046 N+I+ EK+N E I+ +++LKK I D++ + Sbjct: 1250 NEIE----EKKNLISRLRFTETRLASSSFEDQKIKAQMKKLKKLIQDMDPSIPLDSILNE 1305 Query: 1047 ---------XXXXXXXXQISLLKEKLETATTANDENVNKISELTKTREELEAELA----- 1092 ++ LK +L+ T A+ + N IS L +++ E + Sbjct: 1306 PLDNCPDKESDINKLMLEVDYLKRQLDIETRAHYDAENAISALHSKFRKIQGESSLSSSD 1365 Query: 1093 -------AYKNLKNELETKLET----------------SEKALXXXXXXXXXXXXXXIQL 1129 A + LE KL+T + ++ +L Sbjct: 1366 IYKLKFEASEERVKSLEDKLKTMPLRDRTNLPVGDIIKNRDSISKYEEEIRYYKLENYKL 1425 Query: 1130 EKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIANKERQYNEEISQLNDEITST 1189 ++ E+ +L+ L +L + + L+ QL + ++ + + ERQ S + + Sbjct: 1426 QEILNESNGKLSQLTLDLRQSKSKEALLSEQLDRLQKDLESTERQKELLSSTIKQQKQQF 1485 Query: 1190 QQENESIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDALNLQIKELKKKNETNEASLLES 1249 + + ++ L + A+K E+ N+ S I+ L Q K+ +K E +S Sbjct: 1486 ENCMDDLQGNELRLREHIHALKQAEEDVKNMA-SIIEKLKTQNKQKEKLIWEREMERNDS 1544 Query: 1250 IKSVESETVKIKELQDECNFKEKEVSELEDKLKASEDKNSKYLELQKESEKIKEELDAKT 1309 ++ +++K +QD +++ L+++L A ED++ E+ + E++ L A+T Sbjct: 1545 DMQLQETLLELKRVQDVKKILSDDLAHLKERLSAVEDRSQYTDEINRLKEELNCSLKAET 1604 Query: 1310 ------TELKIQLEKITNXXXXXXXXXXXXXXXXXXXXXXRKNAEEQLEKLKNEIQIKNQ 1363 LK +LE TN N ++ + + E+ K + Sbjct: 1605 NLKKEFATLKYKLETSTNDSEAKISDLLKQLDHYTKVVEMLNNEKDAISLAEKELYQKYE 1664 Query: 1364 AFEKERKLLNEGSSTITQEYSEKINTLEDELIRLQNENELKAKEIDNTRSELEKVSLSND 1423 A E + L ++T+ E + L + LQ N + + EK+ + Sbjct: 1665 ALNTECESLKGKIVSLTKIKQELESDLNQKTDALQISNAALSSSTQKNKEITEKIKYLEE 1724 Query: 1424 EL-LEEKQNT-----IKSLQDEILSYKDKITRNDEKLLSIERDNKRDLESLKEQLRAAQE 1477 L L+ +QN+ +K+LQ YKDK +K + + +N + L+ L L+ + Sbjct: 1725 TLQLQMEQNSRNGELVKTLQASCNGYKDKFDDEKQKNIDLYEEN-QTLQKLNTDLQLQLK 1783 Query: 1478 SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIESNETELKSSMETIRKSDE-KLE 1536 + + +E E S+ET K +E K Sbjct: 1784 NLHERLSDTTEKNAWLS--------------------KIHELENMVSLETDLKYEEMKKN 1823 Query: 1537 QSKKSAEEDIKNLQHEKSDLISRINESEKDIEELKSKLRIEAKSGSELETVKQELNNAQE 1596 +S + A E+++ +++D+I N++ + EE + L+ EA+ + + Q+ ++ Sbjct: 1824 KSLERAVEELQTKNSQQTDVIELANKNRSEFEE--ATLKYEAQISDLEKYISQQELEMKK 1881 Query: 1597 KIRINAEENTVLKSKLEDIE 1616 IR N+ ++ ++IE Sbjct: 1882 SIRDNSSYRDKVQEMAQEIE 1901 Score = 129 bits (323), Expect = 1e-31 Identities = 187/984 (19%), Positives = 409/984 (41%), Gaps = 123/984 (12%) Query: 852 LSQKKKAEDGINKMGKDLFALSREMQAVEENCKNLQKEKDKSNVNHQKETKSL----KED 907 +++ KK + INK+ DL +EM E+ K +EK++ VN + T+ L KE+ Sbjct: 860 MTRTKKFNEQINKLKNDL----QEM----ESKKKFLEEKNQKTVNELENTQDLLNQEKEN 911 Query: 908 IAAKITEIKAINENLEEMKIQCNNLSKEKEHISKELVEYKSRFQSHDNLVAKLTEKLKSL 967 + + + + + E ++ Q ++L EK+ IS+E +E + + L E ++ Sbjct: 912 LRKNESLLNRVKTSSETLQKQFDDLVSEKDEISREKLEVAQNLEEAHQKIQGLQETIRER 971 Query: 968 ANNYKDMQAENESLIKAVEESKNESSIQLSNLQNKIDSMSQEKENFQIERGSIEKNIEQL 1027 + + ++N LIK Q+S+L I + + + +E I++L Sbjct: 972 EATLEKLHSKNNELIK-----------QISDLNCDISKEQSSQSLIKESKLKLENEIKRL 1020 Query: 1028 KKTISDLEQTXXXXXXXXXXXXXXXXXQISLLKEKLETATTANDENVNKISELTKTREEL 1087 K I+ E+ ++ L++ A + V + S+L E Sbjct: 1021 KDVINSKEEEIKSFNDKLSSSEEDLDIKLVTLEKNCNIAMSRLQSLVTENSDLRSKNENF 1080 Query: 1088 EAELAAYKN-LKNE------LETKLETSEKALXXXXXXXXXXXXXXIQLEKEATETKQQL 1140 + E AA N LKN+ ++ K++ +K L ++ E ET+ QL Sbjct: 1081 KKEKAALNNQLKNKESELLKMKEKIDNHKKELATFSKQRDDAVSEHGKITAELKETRIQL 1140 Query: 1141 NSLRANLESLEKEHEDLAAQLKKYEEQIANK------ERQYNEEISQLNDEITSTQQENE 1194 ++N + +++E+ + + K+ E++ N + + E ++L+ EI+ Q N+ Sbjct: 1141 TEYKSNYQKIKEEYSNFQRETKEQEQKKRNSLVESLNDSKIKELEARLSQEISLNQYLNK 1200 Query: 1195 SIKKKNDELEGEVKAMKSTSEEQSNLKKSEID-------------ALNLQIKELKKKN-- 1239 I + E +STS L K +I NL+ + +KKN Sbjct: 1201 RISGNSVETNIS-STRRSTSYSDDPLDKEDIIKKYYDLQLAFTEITRNLENEIEEKKNLI 1259 Query: 1240 ------ETNEASLLESIKSVESETVKIKELQDECNFKEKEVSELEDKLKASEDKNSKYLE 1293 ET AS + ++++ K+K+L + + S L + L DK S + Sbjct: 1260 SRLRFTETRLASSSFEDQKIKAQMKKLKKLIQDMDPSIPLDSILNEPLDNCPDKESDINK 1319 Query: 1294 LQKESEKIKEELDAKTTELKIQLEKITNXXXXXXXXXXXXXXXXXXXXXXRKNA-EEQLE 1352 L E + +K +LD +T I+ + A EE+++ Sbjct: 1320 LMLEVDYLKRQLDIETRAHYDAENAISALHSKFRKIQGESSLSSSDIYKLKFEASEERVK 1379 Query: 1353 KLKNEIQ---------------IKNQ----AFEKE---RKLLNEGSSTITQEYSEKINTL 1390 L+++++ IKN+ +E+E KL N I E + K++ L Sbjct: 1380 SLEDKLKTMPLRDRTNLPVGDIIKNRDSISKYEEEIRYYKLENYKLQEILNESNGKLSQL 1439 Query: 1391 EDELIRLQNENELKAKEIDNTRSELEKVSLSNDEL---LEEKQNTIKSLQDEILSYKDKI 1447 +L + +++ L ++++D + +LE + L +++++ ++ D++ + ++ Sbjct: 1440 TLDLRQSKSKEALLSEQLDRLQKDLESTERQKELLSSTIKQQKQQFENCMDDLQGNELRL 1499 Query: 1448 TRNDEKLLSIERDNKRDLESLKEQLRAAQESXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1507 + L E D K ++ S+ E+L+ + Sbjct: 1500 REHIHALKQAEEDVK-NMASIIEKLKTQNKQKEKLIWERE-------------------- 1538 Query: 1508 XXXXXTIESNETELKSSMETIRKSDEKLEQSKKSAEEDIKNLQHEKSDLISRINESEKDI 1567 +E N+++++ ET+ + ++++ KK +D+ +L+ S + R ++ +I Sbjct: 1539 ------MERNDSDMQLQ-ETLLEL-KRVQDVKKILSDDLAHLKERLSAVEDRSQYTD-EI 1589 Query: 1568 EELKSKLRIEAKSGSELETVKQELNNAQEKIRINAEENTVLKSKLEDIERELKDKQAEIK 1627 LK +L K+ + L K+E + K+ + ++ ++K+ D+ ++L ++ Sbjct: 1590 NRLKEELNCSLKAETNL---KKEFATLKYKLETSTNDS---EAKISDLLKQLDHYTKVVE 1643 Query: 1628 SNQEEKELLTSRLKELEQELDSTQQKAQKSEEERRAEVRKFQVEKSQLDEKAMLLETKYN 1687 EK+ ++ KEL Q+ ++ + + + + + + Q +S L++K L+ Sbjct: 1644 MLNNEKDAISLAEKELYQKYEALNTECESLKGKIVSLTKIKQELESDLNQKTDALQISNA 1703 Query: 1688 DLVNKEQAWKRDEDTVKKTTDSQRQEIEKLAKELDNLKAENSKLKEANEDRSEIDDLMLL 1747 L + Q K + +K ++ + ++E+ ++ + +K + N + + DD Sbjct: 1704 ALSSSTQKNKEITEKIKYLEETLQLQMEQNSRNGELVKTLQA---SCNGYKDKFDDEKQK 1760 Query: 1748 VTDLDEKNAKYRSKLKDLGVEISS 1771 DL E+N + DL +++ + Sbjct: 1761 NIDLYEENQTLQKLNTDLQLQLKN 1784 Score = 80.5 bits (197), Expect = 4e-17 Identities = 129/599 (21%), Positives = 255/599 (42%), Gaps = 60/599 (10%) Query: 659 ASRIKQFKKDSYFSKVDMNEDSILT-PELDETGLPKVYFSTYFIQLFNENIYRIRTALSH 717 +S I + K ++ +V ED + T P D T LP +I + R ++S Sbjct: 1363 SSDIYKLKFEASEERVKSLEDKLKTMPLRDRTNLPV------------GDIIKNRDSISK 1410 Query: 718 DPDEEPINKISFEEVEKLQRQCTKLKGEITSLQTETESTHENLTEKLIALTNEHKELDEK 777 +E K+ +++++ + ++T +++S L+E+L L + + + + Sbjct: 1411 YEEEIRYYKLENYKLQEILNESNGKLSQLTLDLRQSKSKEALLSEQLDRLQKDLESTERQ 1470 Query: 778 YQILNSSHSSLKENFSILETELKNVRDSLDEMTQLRDVLETKDKENQTALLEYKSTIHKQ 837 ++L+S+ K+ F +L+ L E E +D +N +++E T +KQ Sbjct: 1471 KELLSSTIKQQKQQFENCMDDLQGNELRLREHIHALKQAE-EDVKNMASIIEKLKTQNKQ 1529 Query: 838 EDSI---KTLEKG-----LETILSQKKKAEDGINKMGKDLFALSREMQAVEENCK---NL 886 ++ + + +E+ L+ L + K+ +D + DL L + AVE+ + + Sbjct: 1530 KEKLIWEREMERNDSDMQLQETLLELKRVQDVKKILSDDLAHLKERLSAVEDRSQYTDEI 1589 Query: 887 QKEKDKSNVNHQKETKSLKEDIAAKITEIKAINENLEEMKIQCNNLSKEKEHISKELVEY 946 + K++ N + + ET KE K + N++ E KI ++L K+ +H +K +VE Sbjct: 1590 NRLKEELNCSLKAETNLKKEFATLKYKLETSTNDS--EAKI--SDLLKQLDHYTK-VVEM 1644 Query: 947 KSRFQSHDNLVAK-LTEKLKSLANNYKDMQAENESLIKAVEESKNESSIQLSNLQNKIDS 1005 + + +L K L +K ++L + ++ + SL K +E +++ + + LQ + Sbjct: 1645 LNNEKDAISLAEKELYQKYEALNTECESLKGKIVSLTKIKQELESDLNQKTDALQISNAA 1704 Query: 1006 MSQEKENFQIERGSIEKNIEQLKKTIS-DLEQTXXXXXXXXXXXXXXXXXQISLLKEKLE 1064 +S + + I + I+ L++T+ +EQ K+K + Sbjct: 1705 LSSSTQ----KNKEITEKIKYLEETLQLQMEQNSRNGELVKTLQASCNGY-----KDKFD 1755 Query: 1065 TATTANDENVNKISELTKTREELEAELAAYKNL---------KNELETKLETSEKALXXX 1115 N + + L K +L+ +L KNL KN +K+ E + Sbjct: 1756 DEKQKNIDLYEENQTLQKLNTDLQLQL---KNLHERLSDTTEKNAWLSKIHELENMVSLE 1812 Query: 1116 XXXXXXXXXXXIQLEKEATETKQQLNSLRAN-LESLEKEHEDLAAQLKKYEEQIANKERQ 1174 LE+ A E Q NS + + +E K + KYE QI++ E+ Sbjct: 1813 TDLKYEEMKKNKSLER-AVEELQTKNSQQTDVIELANKNRSEFEEATLKYEAQISDLEKY 1871 Query: 1175 YNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDALNLQIK 1233 ISQ E+ + ++N S + K E+ E++ KS E + + ID+ N Q K Sbjct: 1872 ----ISQQELEMKKSIRDNSSYRDKVQEMAQEIEFWKS-RYESTMIGSKNIDSNNAQSK 1925 Score = 73.2 bits (178), Expect = 7e-15 Identities = 77/375 (20%), Positives = 163/375 (43%), Gaps = 25/375 (6%) Query: 1371 LLNEGSSTITQEYSEKINTLEDELIR-------LQNENELKAKEIDNTRSEL--EKVSL- 1420 L + T T++++E+IN L+++L L+ +N+ E++NT+ L EK +L Sbjct: 854 LTSSNDMTRTKKFNEQINKLKNDLQEMESKKKFLEEKNQKTVNELENTQDLLNQEKENLR 913 Query: 1421 SNDELLEEKQNTIKSLQ---DEILSYKDKITRNDEKLLSIERDNKRDLESLKEQLRAAQE 1477 N+ LL + + ++LQ D+++S KD+I+R ++ + + ++ L+E +R + Sbjct: 914 KNESLLNRVKTSSETLQKQFDDLVSEKDEISREKLEVAQNLEEAHQKIQGLQETIREREA 973 Query: 1478 SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIESNETELK-------SSMETIRK 1530 + + E E+K S E I+ Sbjct: 974 TLEKLHSKNNELIKQISDLNCDISKEQSSQSLIKESKLKLENEIKRLKDVINSKEEEIKS 1033 Query: 1531 SDEKLEQSKKSAEEDIKNLQHEKSDLISRINESEKDIEELKSK----LRIEAKSGSELET 1586 ++KL S++ + + L+ + +SR+ + +L+SK + +A ++L+ Sbjct: 1034 FNDKLSSSEEDLDIKLVTLEKNCNIAMSRLQSLVTENSDLRSKNENFKKEKAALNNQLKN 1093 Query: 1587 VKQELNNAQEKIRINAEENTVLKSKLEDIERELKDKQAEIKSNQEEKELLTSRLKELEQE 1646 + EL +EKI + +E + +D E AE+K + + S +++++E Sbjct: 1094 KESELLKMKEKIDNHKKELATFSKQRDDAVSEHGKITAELKETRIQLTEYKSNYQKIKEE 1153 Query: 1647 LDSTQQKAQKSEEERR-AEVRKFQVEKSQLDEKAMLLETKYNDLVNKEQAWKRDEDTVKK 1705 + Q++ ++ E+++R + V K + E + E N +NK + E + Sbjct: 1154 YSNFQRETKEQEQKKRNSLVESLNDSKIKELEARLSQEISLNQYLNKRISGNSVETNISS 1213 Query: 1706 TTDSQRQEIEKLAKE 1720 T S + L KE Sbjct: 1214 TRRSTSYSDDPLDKE 1228 >MGEN-G37-01-000221 MG218 cytadherence accessory protein (hmw2) Length = 1805 Score = 131 bits (330), Expect = 2e-32 Identities = 198/1149 (17%), Positives = 464/1149 (40%), Gaps = 96/1149 (8%) Query: 660 SRIKQFKKDSYFSKVDMNEDSILTPELDETGLPKVYFSTYFIQLFNENIYRIRTALSHDP 719 + +KQ ++ ++K +++++ L + + ++ + + + + Sbjct: 446 NEVKQHFQNLEYAKKELDKERNLLDQQKKVDSEAIFQLKEKVAQERKELEELYLVKKQKQ 505 Query: 720 DEEPINKISFEEVEKLQRQCTKLKGEITSLQTETESTHENLTEKLIALTNEHKELDEKYQ 779 D++ + FE+ +L++ + E+ + Q E L I L ++ K+L+ K Q Sbjct: 506 DQKENELLFFEK--QLKQHQADFENELEAKQQELFEAKHALERSFIKLEDKEKDLNTKAQ 563 Query: 780 ILNSSHSSLKENFS-------ILETELKNVRDSLDEMTQLRDVLETKDKENQTALLEYKS 832 + + S LK + S +L+ E +N++ ++ Q R E L + + Sbjct: 564 QIANEFSQLKTDKSKSADFELMLQNEYENLQQEKQKLFQERTYFERNAAVLSNRLQQKRE 623 Query: 833 TIHKQEDSIKTLEKGLETI-LSQKKKAEDGINKMGKDLFALSREMQAVEENCKNLQK--- 888 + +Q++++ L K E L +++ ++ + + K L +++Q + N K Sbjct: 624 ELLQQKETLDQLTKSFEQERLINQREHKELVASVEKQKEILGKKLQDFSQTSLNASKNLA 683 Query: 889 EKDKSNVNHQKETKSLKEDIAAKITEIKAINENLEEMKIQCNNLSKEKEHISKELVEYKS 948 E++ + +KE ++ ++ + + + I +L ++ N E ++ + + ++ Sbjct: 684 EREMAIKFKEKEIEATEKQLLNDVNNAEVIQADLAQLNQSLNQERSELQNAKQRIADF-- 741 Query: 949 RFQSHDNLVAKLTEKLKSLANNYKDMQAENESLIKAVEESKNESSIQ-LSNLQNKIDSMS 1007 H++ + KL E SL +++Q +E ++ + S Q + + ++D ++ Sbjct: 742 ----HNDSLKKLNEYELSLQKRLQELQT--------LEANQKQHSYQNQAYFEGELDKLN 789 Query: 1008 QEKENFQIERGSIEKNIEQLKKTISDLEQTXXXXXXXXXXXXXXXXXQI-------SLLK 1060 +EK+ F R ++ +K+ +SD Q L+ Sbjct: 790 REKQAFLNLRKKQTMEVDAIKQRLSDKHQALNMQQAELDRKTHELNNAFLNHDADQKSLQ 849 Query: 1061 EKLETATTANDENVNKISELTKTREELEAELAAYK----NLKNELETKLETSEKALXXXX 1116 ++L T + S L + + E +A +K N ++L+ E ++K Sbjct: 850 DQLATVKETQKLIDLERSALLEKQREFAENVAGFKRHWSNKTSQLQKIYELTKKQESEQT 909 Query: 1117 XXXXXXXXXXIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIANK----- 1171 L+K+ + Q + +E+ ++E + LA + + + ++ N+ Sbjct: 910 QKETELKIAFSDLQKDYQVFELQKDQEFRQIEAKQRELDKLAEKNNQVKLELDNRFQALQ 969 Query: 1172 ---------ERQYNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNLKK 1222 + + E QLN E T+ Q NES+ K+ ++L +++A ++++ Sbjct: 970 NQKQDTVQAQLELEREQHQLNLEQTAFNQANESLLKQREQLTKKIQAFHYELKKRNQF-- 1027 Query: 1223 SEIDALNLQIKELKKKNETNEASLLESIKSVESETVKIKELQDE-CNFKEKEVSELEDKL 1281 L L+ K L K + + + + + K+ + E +F E + ELE+ Sbjct: 1028 -----LALKGKRLFAKEQDQQ-------RKDQEINWRFKQFEKEYTDFDEAKKRELEELE 1075 Query: 1282 KASEDKNSKYLELQKESEKIKEE---LDAKTTELKIQLEKITNXXXXXXXXXXXXXXXXX 1338 K + +EL+++ EK+ + L+ +I +++ + Sbjct: 1076 KIRRSLSQSNVELERKREKLATDFTNLNKVQHNTQINRDQLNSQIRQFLLERKNFQRFSN 1135 Query: 1339 XXXXXRKNAEEQLEKLKNEIQIKNQAFEKERKLLNEGSSTITQEYSEKINTLEDELIRLQ 1398 + ++L + ++++ +A ++ ++ +E + LE Q Sbjct: 1136 EANAKKAFLIKRLRSFASNLKLQKEALAIQKLEFDKRDEQQKKELQQATLQLEQFKFEKQ 1195 Query: 1399 NENELKAKEIDNTRSELEKVSLSNDELLEEKQNTIKSLQDEILSYKDKITRNDEKLLSIE 1458 N + K +++ +++ EK+S + L +K +K+L L+ K+K + ++L Sbjct: 1196 NFDIEKQRQLVAIKTQCEKLS-DEKKALNQKLVELKNLSQTYLANKNKAEYSQQQLQQKY 1254 Query: 1459 R---DNKRDLESLKEQLRAAQESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIE 1515 D K +LE K+QL S ++ Sbjct: 1255 TNLLDLKENLERTKDQLDKKHRSIFARLTKFANDLRFEKKQLLKAQRI----------VD 1304 Query: 1516 SNETELKSSMETIRKSDEKLEQSKKSAEEDIKNLQHEKSDLISRINESEKDIEELKSKLR 1575 LK + + + E+ + E+ I + ++ I S K++++ + +L+ Sbjct: 1305 DKNRLLKENERNLHFLSNETERKRAVLEDQISYFEKQRKQATDAILASHKEVKKKEGELQ 1364 Query: 1576 IEAKSGSELETVKQELNNAQEKIRINAEENTVLKSKLEDIERELKDKQAEIKSNQEEKEL 1635 K ELET K +LNN K EE + KL ++++ L+ + + + Sbjct: 1365 ---KLLVELETRKTKLNNDFAKFSRQREEFENQRLKLLELQKTLQTQTNSNNFKTKAIQE 1421 Query: 1636 LTSRLKELEQELDSTQQKAQKSEEERRAEVRKF--QVEKSQLDEKAMLLETKYNDLVNKE 1693 + + K +EL+ +++ K++ RK ++E+ + K +L ET+ + + Sbjct: 1422 IENSYKRGMEELNFQKKEFDKNKSRLYEYFRKMRDEIERKESQVKLVLKETQRKANLLEA 1481 Query: 1694 QAWKRDEDTVKKTTDSQRQEIEKLAKELD-NLKAENSKLKEANEDRSEIDDLMLLVTDLD 1752 QA K + + K T D + +E++ ++D ++ + N + KE NE +++ LL L Sbjct: 1482 QANKLNIE--KNTIDFKEKELKAFKDKVDQDIDSTNKQRKELNE---LLNENKLLQQSLI 1536 Query: 1753 EKNAKYRSK 1761 E+ SK Sbjct: 1537 ERERAINSK 1545 Score = 129 bits (324), Expect = 8e-32 Identities = 233/1255 (18%), Positives = 499/1255 (39%), Gaps = 175/1255 (13%) Query: 620 KCLVTMLLGVAYEFSSKESPFPRKEYFEFITKTLGKDNYASRIKQFKKDSYFSKVDMNED 679 K L T +A EFS ++ + FE + + ++ + K F++ +YF + Sbjct: 556 KDLNTKAQQIANEFSQLKTDKSKSADFELMLQNEYENLQQEKQKLFQERTYFERNAAVLS 615 Query: 680 SILTPELDETGLPKVYFSTYFIQLFNENIYRIRTALSHDPDEEPINKISFEE-VEKLQRQ 738 + L + +E K E + ++ + E IN+ +E V +++Q Sbjct: 616 NRLQQKREELLQQK------------ETLDQLTKSFE---QERLINQREHKELVASVEKQ 660 Query: 739 CTKLKGEITSLQTETESTHENLTEKLIALTNEHKELD-EKYQILNSSHSSLKENFSILET 797 L ++ + + +NL E+ +A+ + KE++ + Q+LN + N +++ Sbjct: 661 KEILGKKLQDFSQTSLNASKNLAEREMAIKFKEKEIEATEKQLLNDVN-----NAEVIQA 715 Query: 798 ELKNVRDSLD----EMTQLRDVLETKDKENQTALLEYKSTIHKQEDSIKTLEKGLETILS 853 +L + SL+ E+ + + ++ L EY+ ++ K+ ++TLE + Sbjct: 716 DLAQLNQSLNQERSELQNAKQRIADFHNDSLKKLNEYELSLQKRLQELQTLEANQKQHSY 775 Query: 854 QKKKAEDG-INKMG--KDLFALSREMQAVE-----------ENCKNLQK--------EKD 891 Q + +G ++K+ K F R+ Q +E N+Q+ E + Sbjct: 776 QNQAYFEGELDKLNREKQAFLNLRKKQTMEVDAIKQRLSDKHQALNMQQAELDRKTHELN 835 Query: 892 KSNVNHQKETKSLKEDIAAKITEIKAINEN----LEEMKIQCNNLSKEKEHISKELVEYK 947 + +NH + KSL++ +A K I+ LE+ + N++ K H S + + + Sbjct: 836 NAFLNHDADQKSLQDQLATVKETQKLIDLERSALLEKQREFAENVAGFKRHWSNKTSQLQ 895 Query: 948 SRFQSHDNLVAKLTEKLKSLANNYKDMQAENESLIKAVEESKNESSIQLSNLQNKIDSMS 1007 ++ ++ T+K L + D+Q + + E K++ Q+ Q ++D ++ Sbjct: 896 KIYELTKKQESEQTQKETELKIAFSDLQKD----YQVFELQKDQEFRQIEAKQRELDKLA 951 Query: 1008 QEKENFQIERGSIEKNIEQLKKTISDLEQTXXXXXXXXXXXXXXXXXQISLLKEKLE--- 1064 ++ ++E ++ + L+ D Q Q+ L +E+ + Sbjct: 952 EKNNQVKLE---LDNRFQALQNQKQDTVQ-----------------AQLELEREQHQLNL 991 Query: 1065 TATTANDENVNKISELTKTREELEAELAAYKNLKNELETKLETSEKALXXXXXXXXXXXX 1124 T N N L K RE+L ++ A+ + L K L Sbjct: 992 EQTAFNQAN----ESLLKQREQLTKKIQAFHYELKKRNQFLALKGKRLFAKEQDQQRKDQ 1047 Query: 1125 ----XXIQLEKEATE----TKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIANKER-QY 1175 Q EKE T+ K++L L SL + + +L + +K N + Q+ Sbjct: 1048 EINWRFKQFEKEYTDFDEAKKRELEELEKIRRSLSQSNVELERKREKLATDFTNLNKVQH 1107 Query: 1176 NEEIS--QLNDEITSTQQENESIKKKNDELEGE----VKAMKSTS--------------- 1214 N +I+ QLN +I E ++ ++ ++E + +K ++S + Sbjct: 1108 NTQINRDQLNSQIRQFLLERKNFQRFSNEANAKKAFLIKRLRSFASNLKLQKEALAIQKL 1167 Query: 1215 --EEQSNLKKSEIDALNLQIKELKKKNETNEASLLESIKSVESETVKIKELQDECNFKEK 1272 +++ +K E+ LQ+++ K + + + + +++++ K+ + + N K Sbjct: 1168 EFDKRDEQQKKELQQATLQLEQFKFEKQNFDIEKQRQLVAIKTQCEKLSDEKKALNQKLV 1227 Query: 1273 EVSELEDKLKASEDK--------NSKY---LELQKESEKIKEELDAKTTELKIQLEKITN 1321 E+ L A+++K KY L+L++ E+ K++LD K + +L K N Sbjct: 1228 ELKNLSQTYLANKNKAEYSQQQLQQKYTNLLDLKENLERTKDQLDKKHRSIFARLTKFAN 1287 Query: 1322 XXXXXXXXXXXXXXXXXXXXXXRKNAEEQLEKLKNEIQIKNQA-------FEKERKLLNE 1374 K E L L NE + K FEK+RK + Sbjct: 1288 DLRFEKKQLLKAQRIVDDKNRLLKENERNLHFLSNETERKRAVLEDQISYFEKQRKQATD 1347 Query: 1375 GSSTITQEYSEKINTLEDELIRLQNENELKAKEIDNTRSELEKVSLSNDELLEEKQNTIK 1434 +E +K E EL +L E E + +++N + K S +E E ++ + Sbjct: 1348 AILASHKEVKKK----EGELQKLLVELETRKTKLNN---DFAKFSRQREE-FENQRLKLL 1399 Query: 1435 SLQDEILSYKDKITRNDEKLLSIERDNKRDLESLKEQLRAAQESXXXXXXXXXXXXXXXX 1494 LQ + + + + + IE KR +E L Q + ++ Sbjct: 1400 ELQKTLQTQTNSNNFKTKAIQEIENSYKRGMEELNFQKKEFDKNKSRLYEYFRKMRDEIE 1459 Query: 1495 XXXXXXXXXXXXXXXXXXTIESNETELKSSMETIRKSDEKLEQSKKSAEEDIKNLQHEKS 1554 +E+ +L TI +++L+ K ++DI + ++ Sbjct: 1460 RKESQVKLVLKETQRKANLLEAQANKLNIEKNTIDFKEKELKAFKDKVDQDIDSTNKQRK 1519 Query: 1555 DLISRINESEKDIEELKSKLR-IEAKS---GSELETVKQELNNAQEKI------------ 1598 +L +NE++ + L + R I +K ++ET+K++L++ + ++ Sbjct: 1520 ELNELLNENKLLQQSLIERERAINSKDSLLNKKIETIKRQLHDKEMRVLRLVDRMKLAEQ 1579 Query: 1599 RINAEENTVLKSKLEDIERELKD---KQAEIKSNQEEKELLTSRLKELEQELDSTQQKAQ 1655 + E N + + ++++K+ +I N L L +++ D+T Q Q Sbjct: 1580 KYQTEINRLRTQTFDSEKQDIKNFFPPLFKINGNDMAFPYLYPWLYPQQKQDDNTLQIRQ 1639 Query: 1656 KSEEERRAEVRKFQVEKSQLDEKAMLLETKY------NDLVNKEQAWKRDEDTVKKTTDS 1709 E++ + ++++ E ++L + LLE K + L NK+ + + E ++K + Sbjct: 1640 LFEQQLQFMQQRYENELNELRRQRNLLEKKLDQIQLESQLNNKQSEFSKVESMMEKLLEK 1699 Query: 1710 QR-------QEIEKLAKELD--NLKAENSKLKEANEDRSEIDDLMLLVTDLDEKN 1755 Q+I L K+++ N +S + S+ L+ + +L+++N Sbjct: 1700 TESRLNDFDQKINYLTKKVNQHNTYQPSSYQPTPSYQDSDKQQLLFRIQELEKQN 1754 Score = 118 bits (295), Expect = 2e-28 Identities = 231/1115 (20%), Positives = 451/1115 (40%), Gaps = 135/1115 (12%) Query: 753 TESTHENLTEKLIALTNEHKELD-EKYQILNSSHSSLKE-NFSILETEL--KNVRDSLDE 808 T+ +++ +KL+AL E L+ +K N S+L + N E EL K++ +E Sbjct: 310 TKQNAQHVEDKLVALNKEKDRLNTQKEAFFNLRQSALIDINKLQQENELFAKHLEHQQNE 369 Query: 809 MTQLRD----VLETKDKENQTALLEYKSTIHKQEDSIKTLEKGL-------ETILSQKKK 857 Q + LET+ K Q + E+K+ + + + E+ L +T+L+Q Sbjct: 370 FEQKQSDSLLKLETEYKALQHKINEFKNESATKSEELLNQERELFEKRREIDTLLTQASL 429 Query: 858 AEDGINKMGKDLFALSREMQAVEENCKNLQKEKDKSN--VNHQKETKS-----LKEDIAA 910 + + + L E++ +N + +KE DK ++ QK+ S LKE +A Sbjct: 430 EYEHQRESSQLLKDKQNEVKQHFQNLEYAKKELDKERNLLDQQKKVDSEAIFQLKEKVAQ 489 Query: 911 KITEIKAI------------NENL---EEMKIQCNNLSKEKEHISKELVEYKSRFQSHDN 955 + E++ + NE L +++K + E E +EL E K + + Sbjct: 490 ERKELEELYLVKKQKQDQKENELLFFEKQLKQHQADFENELEAKQQELFEAK---HALER 546 Query: 956 LVAKLTEKLKSLANNYKDMQAENESLIKAVEESKNESSIQLSNLQNKIDSMSQEKENFQI 1015 KL +K K L N K Q NE ++ K++S+ LQN+ +++ QEK+ Sbjct: 547 SFIKLEDKEKDL--NTKAQQIANE--FSQLKTDKSKSADFELMLQNEYENLQQEKQKLFQ 602 Query: 1016 ERGSIEKNIEQLKKTISDLEQTXXXXXXXXXXXXXXXXXQISLLKEKLETATTANDENVN 1075 ER E+N L + ++ Q L+ ++ A+ E Sbjct: 603 ERTYFERNAAVLSNRLQQ-KREELLQQKETLDQLTKSFEQERLINQREHKELVASVEKQK 661 Query: 1076 KISELTKTREELEAELAAYKNLKNELETKLETSEKALXXXXXXXXXXXXXXIQLEKEATE 1135 +I K ++ + L A KNL E E ++ EK + ++ + + Sbjct: 662 EILG-KKLQDFSQTSLNASKNLA-EREMAIKFKEKEIEATEKQLLNDVNNAEVIQADLAQ 719 Query: 1136 TKQQLNSLRANLESLEKE----HEDLAAQLKKYEEQI-----------ANKERQYNEEIS 1180 Q LN R+ L++ ++ H D +L +YE + AN+++ + + Sbjct: 720 LNQSLNQERSELQNAKQRIADFHNDSLKKLNEYELSLQKRLQELQTLEANQKQHSYQNQA 779 Query: 1181 QLNDEITSTQQENE---SIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDALNLQIKELKK 1237 E+ +E + +++KK +K S + N++++E+D ++ Sbjct: 780 YFEGELDKLNREKQAFLNLRKKQTMEVDAIKQRLSDKHQALNMQQAELDRKTHELNNAFL 839 Query: 1238 KNETNEASLLESIKSVESETVKIKELQDECNF-KEKEVSELEDKLKAS-EDKNSKYLELQ 1295 ++ ++ SL + + +V+ ET K+ +L+ K++E +E K +K S+ ++ Sbjct: 840 NHDADQKSLQDQLATVK-ETQKLIDLERSALLEKQREFAENVAGFKRHWSNKTSQLQKIY 898 Query: 1296 KESEKIKEELDAKTTELKIQLEKITNXXXXXXXXXXXXXXXXXXXXXXRKNAEEQLEKLK 1355 + ++K + E K TELKI + E+ ++K Sbjct: 899 ELTKKQESEQTQKETELKIAFSDLQKDYQVFELQKDQEFRQIEAKQRELDKLAEKNNQVK 958 Query: 1356 NEIQIKNQAFEKERKLLNEGSSTITQEYSEKINTLEDELIRLQNENELK-----AKEIDN 1410 E+ + QA + +++ + + +E + LE NE+ LK K+I Sbjct: 959 LELDNRFQALQNQKQDTVQAQLELEREQHQL--NLEQTAFNQANESLLKQREQLTKKIQA 1016 Query: 1411 TRSELEK----VSLSNDELLEEKQNTIKSLQDEILSYKDKITRNDEKLLSIERDNKRDLE 1466 EL+K ++L L ++Q+ + +D+ ++++ K + +++ + KR+LE Sbjct: 1017 FHYELKKRNQFLALKGKRLFAKEQD--QQRKDQEINWRFK--QFEKEYTDFDEAKKRELE 1072 Query: 1467 SLKEQLRAAQESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIESNETELKSSME 1526 L++ R+ +S I E K+ Sbjct: 1073 ELEKIRRSLSQSNVELERKREKLATDFTNLNKVQHNTQINRDQLNSQIRQFLLERKNFQR 1132 Query: 1527 TIRKSDEKLEQSKKSAEEDIKNLQHEKSDLISRINESEKDIEELKSKLRIEAKSGSELET 1586 +++ K K NL+ +K L + E +K E+ K +L+ ++ +LE Sbjct: 1133 FSNEANAKKAFLIKRLRSFASNLKLQKEALAIQKLEFDKRDEQQKKELQ---QATLQLEQ 1189 Query: 1587 VKQELNNAQ-EKIRINAEENTVLKSKLEDIERELKDKQAEIKS--------------NQE 1631 K E N EK R T + KL D ++ L K E+K+ +Q+ Sbjct: 1190 FKFEKQNFDIEKQRQLVAIKTQCE-KLSDEKKALNQKLVELKNLSQTYLANKNKAEYSQQ 1248 Query: 1632 EKELLTSRLKELEQELDSTQQKAQKSEEERRAEVRKF----QVEKSQL-------DEKAM 1680 + + + L +L++ L+ T+ + K A + KF + EK QL D+K Sbjct: 1249 QLQQKYTNLLDLKENLERTKDQLDKKHRSIFARLTKFANDLRFEKKQLLKAQRIVDDKNR 1308 Query: 1681 LLETKYNDL--VNKEQAWKRD--EDTV-------KKTTDS----------QRQEIEKLAK 1719 LL+ +L ++ E KR ED + K+ TD+ + E++KL Sbjct: 1309 LLKENERNLHFLSNETERKRAVLEDQISYFEKQRKQATDAILASHKEVKKKEGELQKLLV 1368 Query: 1720 ELDNLKAE-NSKLKEANEDRSEIDDLMLLVTDLDE 1753 EL+ K + N+ + + R E ++ L + +L + Sbjct: 1369 ELETRKTKLNNDFAKFSRQREEFENQRLKLLELQK 1403 Score = 105 bits (262), Expect = 1e-24 Identities = 219/1111 (19%), Positives = 450/1111 (40%), Gaps = 157/1111 (14%) Query: 731 EVEKLQRQCTKLKGEITSLQTETESTHENLTEKLIALTNEHKELDEKYQILNSSHSSLKE 790 +V+K++ Q K EI SL+ E ++ + L ++ ELD+K L + L Sbjct: 35 DVDKIENQLLK---EIKSLEDELKNL-----KGLKNQAEDNPELDKKINHLEVDLNRLVN 86 Query: 791 NFSILETELKNVRDSLDEMTQL----RDVLETKDKENQTAL-LEYKSTIHKQEDSIKTLE 845 + + + ++ D + E+ L ++ L +EN L +Y + + Q + L Sbjct: 87 EYKNFQFQKNHMVDKVSELDNLTRFYKNELTRLQQENADFLNSKYANLANFQANYHNKLN 146 Query: 846 KGLETILSQKKKAEDGINKMGKDLFALSREMQAVEENCKNLQKEKDKSNVNHQKETKSLK 905 I +Q + IN++ + + + ++ N LQ N N E K+ Sbjct: 147 DFHRLIENQNQT----INRLNQKI---NGNQNLIDNNVALLQ------NPNITVEKKNYL 193 Query: 906 EDIAAKITEIKAINENLEEMKIQCNNLSKEKEHISKELVEYKSRFQSHDNLVAKLTEKLK 965 ++ I + L++++ Q LS E E+ +ELV + Q N+ + + Sbjct: 194 LNV------IDQLYNELDQLENQKRLLSIEYENTYRELVSADNELQ---NVYENIDQNQI 244 Query: 966 SLANNYKDMQAENESLIKAVEESKNESSIQLSNLQNKIDSMSQEKENFQIERGSIEKNIE 1025 + Y+ + E L + ++ +K E + S L+ KID +F I E ++ Sbjct: 245 QFKHQYQTYRDELSQLERKIQLTKQELVDKESALRVKIDD-----ADFYINARLAE--LD 297 Query: 1026 QLKKTISDLEQTXXXXXXXXXXXXXXXXXQISLLKEKLETATTANDENVNKISELTKTRE 1085 + K +S + + L + E + I++L + E Sbjct: 298 DVAKQLSFQDGITKQNAQHVEDKLVALNKEKDRLNTQKEAFFNLRQSALIDINKLQQENE 357 Query: 1086 ----ELEAELAAYKNLKNELETKLETSEKAL----XXXXXXXXXXXXXXIQLEKEATETK 1137 LE + ++ +++ KLET KAL + E+E E + Sbjct: 358 LFAKHLEHQQNEFEQKQSDSLLKLETEYKALQHKINEFKNESATKSEELLNQERELFEKR 417 Query: 1138 QQLNSLRANLESLEKEHEDLAAQLKK--------------YEEQIANKERQYNEEISQLN 1183 +++++L SLE EH+ ++QL K Y ++ +KER ++ +++ Sbjct: 418 REIDTLLTQ-ASLEYEHQRESSQLLKDKQNEVKQHFQNLEYAKKELDKERNLLDQQKKVD 476 Query: 1184 DEITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDALNLQIK----ELKKKN 1239 E + Q E + ++ ELE E+ +K ++Q K++E+ Q+K + + + Sbjct: 477 SE--AIFQLKEKVAQERKELE-ELYLVKKQKQDQ---KENELLFFEKQLKQHQADFENEL 530 Query: 1240 ETNEASLLESIKSVESETVKIKELQDECNFKEKEVSELEDKLKASEDKN--------SKY 1291 E + L E+ ++E +K+++ + + N K ++++ +LK + K+ ++Y Sbjct: 531 EAKQQELFEAKHALERSFIKLEDKEKDLNTKAQQIANEFSQLKTDKSKSADFELMLQNEY 590 Query: 1292 LELQKESEKIKEE--------------LDAKTTEL---KIQLEKITNXXXXXXXXXXXXX 1334 LQ+E +K+ +E L K EL K L+++T Sbjct: 591 ENLQQEKQKLFQERTYFERNAAVLSNRLQQKREELLQQKETLDQLTKSFEQERLINQREH 650 Query: 1335 XXXXXXXXXRK---------------NAEEQLEKLKNEIQIKNQAFE-KERKLLNE--GS 1376 +K NA + L + + I+ K + E E++LLN+ + Sbjct: 651 KELVASVEKQKEILGKKLQDFSQTSLNASKNLAEREMAIKFKEKEIEATEKQLLNDVNNA 710 Query: 1377 STITQEYSEKINTLEDELIRLQNENELKAKEIDNTRSELEKVSLSNDELLEEKQNTIKSL 1436 I + ++ +L E LQN + A +++ +L + LS + L+E Q T+++ Sbjct: 711 EVIQADLAQLNQSLNQERSELQNAKQRIADFHNDSLKKLNEYELSLQKRLQELQ-TLEAN 769 Query: 1437 QDEILSYK---------DKITRNDEKLLSIERDNKRDLESLKEQLRAAQESXXXXXXXXX 1487 Q + SY+ DK+ R + L++ + +++++K++L ++ Sbjct: 770 QKQ-HSYQNQAYFEGELDKLNREKQAFLNLRKKQTMEVDAIKQRLSDKHQALNMQQAELD 828 Query: 1488 XXXXXXXXXXXXXXXXXXXXXXXXXTIESNETELKSSMETIRKSDEKLEQSKKSAEE--D 1545 T++ ET+ +E LE+ ++ AE Sbjct: 829 RKTHELNNAFLNHDADQKSLQDQLATVK--ETQKLIDLE----RSALLEKQREFAENVAG 882 Query: 1546 IKNLQHEKSDLISRINESEKDIEELKSKLRIEAK-SGSELETVKQ--ELNNAQEKIRINA 1602 K K+ + +I E K E +++ E K + S+L+ Q EL QE +I A Sbjct: 883 FKRHWSNKTSQLQKIYELTKKQESEQTQKETELKIAFSDLQKDYQVFELQKDQEFRQIEA 942 Query: 1603 EENTV--LKSKLEDIERELKDKQAEIKSNQEEKELLTSRLKELEQELDSTQQKAQKSEE- 1659 ++ + L K ++ EL ++ +++ +++ L+ + +L+ Q ++ E Sbjct: 943 KQRELDKLAEKNNQVKLELDNRFQALQNQKQDTVQAQLELEREQHQLNLEQTAFNQANES 1002 Query: 1660 ---ERRAEVRKFQVEKSQLDEKAMLLETKYNDLVNKEQAWKRDEDTV--------KKTTD 1708 +R +K Q +L ++ L K L KEQ +R + + K+ TD Sbjct: 1003 LLKQREQLTKKIQAFHYELKKRNQFLALKGKRLFAKEQDQQRKDQEINWRFKQFEKEYTD 1062 Query: 1709 ---SQRQEIEKLAKELDNLKAENSKLKEANE 1736 ++++E+E+L K +L N +L+ E Sbjct: 1063 FDEAKKRELEELEKIRRSLSQSNVELERKRE 1093 Score = 104 bits (259), Expect = 3e-24 Identities = 191/997 (19%), Positives = 399/997 (40%), Gaps = 167/997 (16%) Query: 841 IKTLEKGLETILSQKKKAEDGINKMGKDLFALSREMQAVEENCKNLQKEKDKSNVNHQKE 900 IK+LE L+ + K +AED ++ K + L ++ + KN Q +K+ V+ E Sbjct: 47 IKSLEDELKNLKGLKNQAEDN-PELDKKINHLEVDLNRLVNEYKNFQFQKNHM-VDKVSE 104 Query: 901 TKSLKEDIAAKITEIKAINENLEEMKIQCNNLSKEKEHISKELVEYKSRFQSHDNLVAKL 960 +L ++T ++ EN + + + NL+ + + +L ++ ++ + + +L Sbjct: 105 LDNLTRFYKNELTRLQ--QENADFLNSKYANLANFQANYHNKLNDFHRLIENQNQTINRL 162 Query: 961 TEKLKS----LANNYKDMQAENESLIKAVEESKNESSIQLSNLQNKIDSMSQEKENFQIE 1016 +K+ + NN +Q N ++ E KN + L N++D + +K IE Sbjct: 163 NQKINGNQNLIDNNVALLQNPNITV-----EKKNYLLNVIDQLYNELDQLENQKRLLSIE 217 Query: 1017 RGSIEKNIEQLKKTISDLEQTXXXXXXXXXXXXXXXXXQISLLKEKLETATTANDENVNK 1076 + + + + ++ + ++S L+ K++ E V+K Sbjct: 218 YENTYRELVSADNELQNVYENIDQNQIQFKHQYQTYRDELSQLERKIQLT---KQELVDK 274 Query: 1077 ISELTKTREELEAELAAYKNLKNELETKLETSEKALXXXXXXXXXXXXXXIQLEKEATET 1136 S L ++ + + N +L+ K QL + T Sbjct: 275 ESALRVKIDDADFYI-------NARLAELDDVAK-----------------QLSFQDGIT 310 Query: 1137 KQQLNSLRANLESLEKEHEDLAAQLKKYEE--QIA----NKERQYNEEISQLNDEITSTQ 1190 KQ + L +L KE + L Q + + Q A NK +Q NE ++ + Sbjct: 311 KQNAQHVEDKLVALNKEKDRLNTQKEAFFNLRQSALIDINKLQQENELFAKHLEH----- 365 Query: 1191 QENESIKKKND---ELEGEVKAMKSTSEEQSNLKKSEIDALNLQIKELKKKNETNEASLL 1247 Q+NE +K++D +LE E KA++ E N ++ + L Q +EL +K + L Sbjct: 366 QQNEFEQKQSDSLLKLETEYKALQHKINEFKNESATKSEELLNQERELFEKRREIDTLLT 425 Query: 1248 ESIKSVESETVKIKELQDECNFKEKEVSELEDKLKASEDKNSKYLELQK--ESEKIKEEL 1305 ++ E + + L+D+ N ++ LE K DK L+ QK +SE I +L Sbjct: 426 QASLEYEHQRESSQLLKDKQNEVKQHFQNLE-YAKKELDKERNLLDQQKKVDSEAI-FQL 483 Query: 1306 DAKTTELKIQLEKITNXXXXXXXXXXXXXXXXXXXXXXRKNAEEQLEKLKNEIQIKNQAF 1365 K + + +LE++ +K +++ E L E Q+K Sbjct: 484 KEKVAQERKELEEL-------------------YLVKKQKQDQKENELLFFEKQLKQHQA 524 Query: 1366 EKERKLLNEGSSTITQEYSEKINTLEDELIRLQNENE---LKAKEIDNTRSELE------ 1416 + E +L QE E + LE I+L+++ + KA++I N S+L+ Sbjct: 525 DFENEL-----EAKQQELFEAKHALERSFIKLEDKEKDLNTKAQQIANEFSQLKTDKSKS 579 Query: 1417 ---KVSLSN--DELLEEKQ-----------------NTIKSLQDEILSYKDKITRNDEKL 1454 ++ L N + L +EKQ N ++ ++E+L K+ + D+ Sbjct: 580 ADFELMLQNEYENLQQEKQKLFQERTYFERNAAVLSNRLQQKREELLQQKETL---DQLT 636 Query: 1455 LSIERDNKRDLESLKEQLRAAQESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTI 1514 S E++ + KE + + ++ I Sbjct: 637 KSFEQERLINQREHKELVASVEKQKEILGKKLQDFSQTSLNASKNLAEREMAIKFKEKEI 696 Query: 1515 ESNETELKSSMETIRKSDEKLEQSKKSAEEDIKNLQHEK-------SDLISRINESE--- 1564 E+ E +L + + L Q +S ++ LQ+ K +D + ++NE E Sbjct: 697 EATEKQLLNDVNNAEVIQADLAQLNQSLNQERSELQNAKQRIADFHNDSLKKLNEYELSL 756 Query: 1565 -KDIEELKSK-----------------------------LRIEAKSGSELETVKQELNNA 1594 K ++EL++ L + K E++ +KQ L++ Sbjct: 757 QKRLQELQTLEANQKQHSYQNQAYFEGELDKLNREKQAFLNLRKKQTMEVDAIKQRLSDK 816 Query: 1595 QEKIRINAEENTVLKSKLEDI-------ERELKDKQAEIKSNQEEKELLTSRLKELEQEL 1647 + + + E +L + ++ L+D+ A +K Q+ +L S L E ++E Sbjct: 817 HQALNMQQAELDRKTHELNNAFLNHDADQKSLQDQLATVKETQKLIDLERSALLEKQREF 876 Query: 1648 DSTQQKAQKSEEERRAEVRKF----QVEKSQLDEKAMLLETKYNDLVNKEQAWKRDEDTV 1703 ++ + ++++K + ++S+ +K L+ ++DL Q ++ +D Sbjct: 877 AENVAGFKRHWSNKTSQLQKIYELTKKQESEQTQKETELKIAFSDLQKDYQVFELQKDQE 936 Query: 1704 KKTTDSQRQEIEKLAKELDNLKAENSKLKEANEDRSE 1740 + +++++E++KLA++ + +K E +A +++ + Sbjct: 937 FRQIEAKQRELDKLAEKNNQVKLELDNRFQALQNQKQ 973 >SCER-S28-01-001306 ORFP:YDR285W ZIP1, Chr IV from 1032427-1035054 Length = 875 Score = 124 bits (310), Expect = 3e-30 Identities = 151/724 (20%), Positives = 289/724 (39%), Gaps = 73/724 (10%) Query: 742 LKGEITSLQTETESTHENLTEKLIALTNEHKELDEKYQILNSSHSSLKENFSILETELKN 801 LK ++ +++ +T+ E +TE KE E + N S ++LK++ + E + N Sbjct: 103 LKNDVAAIENDTDEDFE-ITEVREVSEGVAKETKESHGDPNDSETTLKDS-KMHEYTMTN 160 Query: 802 VRDSL-----DEMTQLRDVLETKDKENQTALLEYKSTIHKQEDSIKTLEKGLETILSQKK 856 + L + T DVL Q K + KQ+ L+ L++ S Sbjct: 161 GKAPLHTSINNSSTSSNDVLLEAFTNTQRICSNLKQELQKQQQDNAKLKVRLQSYASNSD 220 Query: 857 KAEDGINKMGKDLFALSREMQAVEENCKNLQKEKDKSNVNHQKETKSLKEDIAAKITEIK 916 K + + K L + ++E L K+ N + + K L+++ I Sbjct: 221 KINEKVGKYKSCL-------ETLQERIATLTSHKN----NQETKLKDLRQNHQLYQRRIS 269 Query: 917 AINENLEEMKIQCNNLSKEKEHISKEL------VEYKSRFQSHDNLVAKLTEKLKSLANN 970 ++E + N+L K K+ EL +EY R D+ +L+E+ ++ Sbjct: 270 GFKTSIENLNKTINDLGKNKKEADAELMKKGKEIEYLKR--ELDDCSGQLSEEKIKNSSL 327 Query: 971 YKDMQAENESLIKAVE----ESKNESSIQLSNLQNKIDSMSQEK--ENFQIERGSIEKNI 1024 ++M E +IK++E E K +Q + + ++ + ++K ++F + + ++ + Sbjct: 328 IQEMGKNREEMIKSIENFFSEDKAHHLLQFNKFEERVHDLFEKKLQKHFDVAKDTLNVGL 387 Query: 1025 EQLKKTISDLEQTXXXXXXXXXXXXXXXXXQISLLKEKLE-TATTANDENVNKISELTKT 1083 +S +T Q +KE LE +++ DE I+EL+ T Sbjct: 388 RNTTVELSSNTET-------------MLKQQYEDIKENLEQKMSSSKDEMAKTINELSVT 434 Query: 1084 REEL-----EAELAAYKNLKNELETKLETSEKALXXXXXXXXXXXXXXIQLEKEATETKQ 1138 ++ L E L + N++ L +++ + + L L K Sbjct: 435 QKGLIMGVQEELLTSSGNIQTALVSEMNNTRQELLDDASQTAKNYASLENLVKAYKAEIV 494 Query: 1139 QLNSLRANLESLEKEHEDLAAQLKKYEEQIANKERQYNEEISQL---NDEITSTQQENES 1195 Q N ++ LE E L++Q + + KE QY + + +L N EI+ + +S Sbjct: 495 QSNEYEERIKHLESERSTLSSQKNQIISSLGTKEAQYEDLVKKLEAKNIEISQISGKEQS 554 Query: 1196 IKKKNDELEGEVKAMKSTSEEQSNLKKSEIDALNLQIKELKKKNETNEASLLESIKSVES 1255 + +KN+ L E+K ++ E+ +NL + K E +S E +K++ S Sbjct: 555 LTEKNENLSNELKKVQDQLEKLNNLNIT-----------TKSNYENKISSQNEIVKALVS 603 Query: 1256 ETVKIKE-LQDECNFKEKEVSELEDKLKASEDKNSKYLELQKESEKIKE---ELDAKTTE 1311 E +K+ +Q KE E + KL+A + N + +L E ++K EL+ + Sbjct: 604 ENDTLKQRIQQLVEIKENEQKDHTTKLEAFQKNNEQLQKLNVEVVQLKAHELELEEQNRH 663 Query: 1312 LKIQLEKITNXXXXXXXXXXXXXXXXXXXXXXRKNAEEQLEKLKNEIQIKNQAFEKERKL 1371 LK LEK K+ ++ + K E+Q ++ E+ K Sbjct: 664 LKNCLEK----KETGVEESLSDVKTLKQQVIVLKSEKQDITAEKLELQDNLESLEEVTKN 719 Query: 1372 LNEGSSTITQEYSEKINTLEDELIRLQNENELKAKEIDNTRSELEKVSLSNDELLEEKQN 1431 L + + +E +KI LE+ +NE K + S+ K + + L Sbjct: 720 LQQKVQSQKRELEQKIKELEEIKNHKRNEPSKKGTQNFTKPSDSPKKNATTSNLFPNNSA 779 Query: 1432 TIKS 1435 I S Sbjct: 780 AIHS 783 Score = 79.7 bits (195), Expect = 7e-17 Identities = 139/723 (19%), Positives = 293/723 (40%), Gaps = 90/723 (12%) Query: 1062 KLETATTANDENVN-KISELTKTREELEAELAAYKNLKNELETKLETSE---------KA 1111 K + A ND + + +I+E+ + E + E N+ ET L+ S+ KA Sbjct: 104 KNDVAAIENDTDEDFEITEVREVSEGVAKETKESHGDPNDSETTLKDSKMHEYTMTNGKA 163 Query: 1112 LXXXXXXXXXXXXXXIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIANK 1171 + LE T T++ ++L+ L+ ++++ L +L+ Y A+ Sbjct: 164 PLHTSINNSSTSSNDVLLEA-FTNTQRICSNLKQELQKQQQDNAKLKVRLQSY----ASN 218 Query: 1172 ERQYNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSE---EQSNLKKSEIDAL 1228 + NE++ + + + Q+ ++ + E ++K ++ + + + K+ I+ L Sbjct: 219 SDKINEKVGKYKSCLETLQERIATLTSHKNNQETKLKDLRQNHQLYQRRISGFKTSIENL 278 Query: 1229 NLQIKELKKKNETNEASLLESIKSVESETVKIKELQDECNFKEKE--------VSEL--- 1277 N I +L K + +A L++ K +E +K D+C+ + E + E+ Sbjct: 279 NKTINDLGKNKKEADAELMKKGKEIEY----LKRELDDCSGQLSEEKIKNSSLIQEMGKN 334 Query: 1278 -EDKLKA-----SEDKNSKYLELQKESEKIKEELDAKTTELKIQLEKITNXXXXXXXXXX 1331 E+ +K+ SEDK L+ K E++ +L K + + K T Sbjct: 335 REEMIKSIENFFSEDKAHHLLQFNKFEERV-HDLFEKKLQKHFDVAKDT-------LNVG 386 Query: 1332 XXXXXXXXXXXXRKNAEEQLEKLKNEIQIKNQAFEKER-KLLNEGSSTITQEYSEKINTL 1390 ++Q E +K ++ K + + E K +NE S +TQ+ I + Sbjct: 387 LRNTTVELSSNTETMLKQQYEDIKENLEQKMSSSKDEMAKTINELS--VTQK--GLIMGV 442 Query: 1391 EDELIRLQ-NENELKAKEIDNTRSELEKVSLSNDELLEEKQNTIK---SLQDEILSYKDK 1446 ++EL+ N E++NTR EL L++ T K SL++ + +YK + Sbjct: 443 QEELLTSSGNIQTALVSEMNNTRQEL----------LDDASQTAKNYASLENLVKAYKAE 492 Query: 1447 ITRNDEKLLSIERDNKRDLESLKEQLRAAQESXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1506 I +++E + + LES + L + + Sbjct: 493 IVQSNEY-----EERIKHLESERSTLSSQKNQIISSLGTKEAQYEDLVKKLEAKNIEISQ 547 Query: 1507 XXXXXXTIESNETELKSSMETIRKSDEKLEQSKKSAEEDIKNLQHEKSDLISRINESEKD 1566 ++ L + ++ ++ EKL + + + +N +++++ + SE D Sbjct: 548 ISGKEQSLTEKNENLSNELKKVQDQLEKLNNLNITTKSNYENKISSQNEIVKAL-VSEND 606 Query: 1567 IEELKSKLRIEAKSGSELE-TVKQEL---NNAQ-EKIRINAEENTVLKSKLEDIERELK- 1620 + + + +E K + + T K E NN Q +K+ + + + +LE+ R LK Sbjct: 607 TLKQRIQQLVEIKENEQKDHTTKLEAFQKNNEQLQKLNVEVVQLKAHELELEEQNRHLKN 666 Query: 1621 ----------DKQAEIKSNQEEKELLTSRLKELEQELDSTQQKAQKSEEERRAEVRKFQV 1670 + +++K+ +++ +L S +++ E Q + EE + +K Q Sbjct: 667 CLEKKETGVEESLSDVKTLKQQVIVLKSEKQDITAEKLELQDNLESLEEVTKNLQQKVQS 726 Query: 1671 EKSQLDEKAMLLETKYNDLVNKEQAWKRDEDTVKKTTDSQRQEIEKLAKELDNLKAENSK 1730 +K +L++K LE N N+ K+ K +DS ++ +N A +S Sbjct: 727 QKRELEQKIKELEEIKNHKRNEPS--KKGTQNFTKPSDSPKKNATTSNLFPNNSAAIHSP 784 Query: 1731 LKE 1733 +K+ Sbjct: 785 MKK 787 Score = 70.9 bits (172), Expect = 3e-14 Identities = 122/617 (19%), Positives = 246/617 (39%), Gaps = 80/617 (12%) Query: 710 RIRTALSHDPDEEPINKISFEEVEKLQRQCTKLKGEITSLQTETESTHENLTEKLIALTN 769 RI T SH ++E K + + QR+ + K I +L +N E L Sbjct: 239 RIATLTSHKNNQETKLKDLRQNHQLYQRRISGFKTSIENLNKTINDLGKNKKEADAELMK 298 Query: 770 EHKELDEKYQILNSSHSSLKENFSILETELKNVRDSLDEMTQLRDVLETKDKENQTALLE 829 + KE++ + L+ L E + ++ + + +EM + + ++DK + LL+ Sbjct: 299 KGKEIEYLKRELDDCSGQLSEEKIKNSSLIQEMGKNREEMIKSIENFFSEDKAHH--LLQ 356 Query: 830 YKSTIHKQEDSI-KTLEKGLETILSQKKKAEDGINKMGKDLFALSREMQAVEENCKNLQK 888 + + D K L+K + A+D +N L + E+ + E Q Sbjct: 357 FNKFEERVHDLFEKKLQKHFDV-------AKDTLNV---GLRNTTVELSSNTETMLKQQY 406 Query: 889 EKDKSNVNHQKETKSLKEDIAAKITEIKAINENL-----EEMKIQCNNLS----KEKEHI 939 E K N+ +++ S K+++A I E+ + L EE+ N+ E + Sbjct: 407 EDIKENL--EQKMSSSKDEMAKTINELSVTQKGLIMGVQEELLTSSGNIQTALVSEMNNT 464 Query: 940 SKELVEYKSR----FQSHDNLVA----------KLTEKLKSLANNYKDMQAENESLIKAV 985 +EL++ S+ + S +NLV + E++K L + + ++ +I ++ Sbjct: 465 RQELLDDASQTAKNYASLENLVKAYKAEIVQSNEYEERIKHLESERSTLSSQKNQIISSL 524 Query: 986 --EESKNES--------SIQLSNLQNKIDSMSQEKENFQIERGSIEKNIEQLKK----TI 1031 +E++ E +I++S + K S++++ EN E ++ +E+L T Sbjct: 525 GTKEAQYEDLVKKLEAKNIEISQISGKEQSLTEKNENLSNELKKVQDQLEKLNNLNITTK 584 Query: 1032 SDLEQTXXXXXXXXXXXXXXXXXQISLLKEKLETATTANDENVNKISELTKTREELE--- 1088 S+ E +++ +E ++ K+ K E+L+ Sbjct: 585 SNYENKISSQNEIVKALVSENDTLKQRIQQLVEIKENEQKDHTTKLEAFQKNNEQLQKLN 644 Query: 1089 AELAAYKNLKNELETK-------LETSEKALXXXXXXXXXXXXXXIQLEKEATETKQQLN 1141 E+ K + ELE + LE E + I L+ E + + Sbjct: 645 VEVVQLKAHELELEEQNRHLKNCLEKKETGVEESLSDVKTLKQQVIVLKSEKQDITAEKL 704 Query: 1142 SLRANLESLEKEHEDLAAQLKKYEEQIANKERQYNEEISQLNDEITSTQQENESIKKKND 1201 L+ NLESLE+ ++L ++++ +++R+ ++I +L E + NE KK Sbjct: 705 ELQDNLESLEEVTKNL-------QQKVQSQKRELEQKIKEL--EEIKNHKRNEPSKKGTQ 755 Query: 1202 ELEGEVKAMKSTSEEQSNLKKSEIDALNLQIKELKKKNETNEASLLESIKSVESETVKIK 1261 + K + SNL + A++ +K+ K + +++ + S ET K Sbjct: 756 NFTKPSDSPKKNA-TTSNLFPNNSAAIHSPMKKCPKVDHISKSRINSS-----KETSK-- 807 Query: 1262 ELQDECNFKEKEVSELE 1278 DE + +LE Sbjct: 808 -FNDEFDLSSSSNDDLE 823 Score = 68.2 bits (165), Expect = 2e-13 Identities = 116/614 (18%), Positives = 238/614 (38%), Gaps = 134/614 (21%) Query: 1185 EITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDALNLQIKELKKKNETNEA 1244 EIT ++ +E + K+ E G+ ++ ++ LK S++ + +A Sbjct: 119 EITEVREVSEGVAKETKESHGD------PNDSETTLKDSKMHEYTMT---------NGKA 163 Query: 1245 SLLESIKSVESETVKIKELQDECNFKEKEVSELEDKLKASEDKNSKY-LELQK---ESEK 1300 L SI + S T L + ++ S L+ +L+ + N+K + LQ S+K Sbjct: 164 PLHTSINN--SSTSSNDVLLEAFTNTQRICSNLKQELQKQQQDNAKLKVRLQSYASNSDK 221 Query: 1301 IKEELDAKTTELKIQLEKITNXXXXXXXXXXXXXXXXXXXXXXRKNAEEQLEKLKNEIQI 1360 I E++ + L+ E+I + N E +L+ L+ Q+ Sbjct: 222 INEKVGKYKSCLETLQERIATLTSH------------------KNNQETKLKDLRQNHQL 263 Query: 1361 KNQAFEKERKLLNEGSSTITQEYSEKINTLEDELIRLQNENELKAKEIDNTRSELEKVSL 1420 + + + + TI K + EL++ E E +E+D+ +L + + Sbjct: 264 YQRRISGFKTSIENLNKTINDLGKNK-KEADAELMKKGKEIEYLKRELDDCSGQLSEEKI 322 Query: 1421 SNDELLEE----KQNTIKSLQDEILSYKD----KITRNDEKLLSI-ERDNKRDLESLKEQ 1471 N L++E ++ IKS+++ K + + +E++ + E+ ++ + K+ Sbjct: 323 KNSSLIQEMGKNREEMIKSIENFFSEDKAHHLLQFNKFEERVHDLFEKKLQKHFDVAKDT 382 Query: 1472 LRAAQESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIESNETELKSSMETIRKS 1531 L + + ET LK E I+++ Sbjct: 383 LNVGLRNTTVELSS------------------------------NTETMLKQQYEDIKEN 412 Query: 1532 -DEKLEQSKKSAEEDIKNLQHEKSDLISRINESEKDIEELKSKLRIEAKSGSELETVKQE 1590 ++K+ SK + I L + LI + E E L S I+ SE+ +QE Sbjct: 413 LEQKMSSSKDEMAKTINELSVTQKGLIMGVQE-----ELLTSSGNIQTALVSEMNNTRQE 467 Query: 1591 L----------------------------NNAQEKIR--------INAEENTVLKS---- 1610 L N +E+I+ +++++N ++ S Sbjct: 468 LLDDASQTAKNYASLENLVKAYKAEIVQSNEYEERIKHLESERSTLSSQKNQIISSLGTK 527 Query: 1611 --KLEDIERELKDKQAEIKSNQEEKELLTSRLKELEQELDSTQQKAQKSEEERRAEVRKF 1668 + ED+ ++L+ K EI +++ LT + + L EL Q + +K + Sbjct: 528 EAQYEDLVKKLEAKNIEISQISGKEQSLTEKNENLSNELKKVQDQLEKLNNLNITTKSNY 587 Query: 1669 QVEKSQLDE--KAML-----LETKYNDLVNKEQAWKRDEDTVKKTTDSQRQEIEKLAKEL 1721 + + S +E KA++ L+ + LV ++ ++D T + ++++KL E+ Sbjct: 588 ENKISSQNEIVKALVSENDTLKQRIQQLVEIKENEQKDHTTKLEAFQKNNEQLQKLNVEV 647 Query: 1722 DNLKAENSKLKEAN 1735 LKA +L+E N Sbjct: 648 VQLKAHELELEEQN 661 >MPNE-M12-01-000474 gi|13508213|ref|NP_110162.1| coiled coil protein, putative structural protein involved in cytosceleton [Mycoplasma pneumoniae] Length = 1033 Score = 94.7 bits (234), Expect = 2e-21 Identities = 143/648 (22%), Positives = 273/648 (42%), Gaps = 110/648 (16%) Query: 1152 KEHEDLAAQLKKYEEQIANKERQYNEEISQLNDEITSTQQENESIKKKNDELEG-----E 1206 K ED A Q +++IA K+ Q + +Q+ E+ Q E + E + Sbjct: 287 KPAEDSAHQSAVLDKEIATKQAQLQQLQAQI--ELRQAQLETPPVTYMGVEEYKLLPVQD 344 Query: 1207 VKAMKSTSEEQSNLKKSEID-------ALNLQIKE-LKKKNETNEASLLESIKSVESETV 1258 V ++ T + L + ++D AL +Q++E L K + +++ +L+ Sbjct: 345 VVPVQPTVSFEMTLLQEQLDKALKHNAALQIQLEEQLAKPLQYDQSPVLQE--------- 395 Query: 1259 KIKELQDECNFKEKEVSELEDKLKASEDKNSKYLELQKESEKIKEELD---AKTTELKIQ 1315 +I+ LQ++ +E++EL+ KL S++ + L++E+ +K+ L + +L Sbjct: 396 RIELLQNQNTNLTQELNELQQKLFKSQNNSLLLARLEEENRTLKQHLQNNLPEANQLNFV 455 Query: 1316 LEKITNXXXXXXXXXXXXXXXXXXXXXXRKNAEEQLEKLKNEIQIKNQAFEKERKLLNEG 1375 LEK EQL++ K+ + ++ + ++ + K E Sbjct: 456 LEKQL----------------------------EQLQQDKHSLTLQIEQYKFDSKKHQEQ 487 Query: 1376 SSTITQEYSEKINTLEDELIRLQNENE-LKAKEIDNTRSELEKVSLSNDELLEEKQNTIK 1434 + I SE IN+LE E+I L+ N+ L E +N + E L +L +E Sbjct: 488 LALIPSLRSE-INSLETEVISLKQTNQRLSLIERENNFLKTEIKQLRETKLNDENTKYRN 546 Query: 1435 SLQDEILSYKDKITRNDEKLLSIERDNKRDLESLKEQLRAAQESXXXXXXXXXXXXXXXX 1494 L+ L D +D KL +E + + +EQL Q Sbjct: 547 LLKQYELMRAD----SDAKLKELEHEQHLAHQHHQEQLAQLQRHNEALVKELDQ------ 596 Query: 1495 XXXXXXXXXXXXXXXXXXTIESNETELKSSMETIRKSDEKLEQSKKS-------AEEDIK 1547 +++ EL + + + LEQ S AEE+++ Sbjct: 597 -------------------VKATNFELGLAAQGFEQQKVVLEQKNSSLLASLQAAEENVQ 637 Query: 1548 NLQHEKSDLISRINESE---KDIEELKSKLRIEAKSGSELETVKQELNNAQEKIRINAEE 1604 L S+L +++N E K+ SK K +LE + +L+ QE++ ++ Sbjct: 638 ALGITNSELQNQLNVLEFTHKEKTAFDSKTLTLTKQ--QLEQTQFDLSLTQEQLATFKQQ 695 Query: 1605 NTVLKSKLEDIERELKDKQAE---IKSNQEEKELLTSRLKELEQELDSTQQKAQKSEEER 1661 N L KL E +L Q + Q + ELL +L+ E + TQQ+ +++ E Sbjct: 696 NQSLTDKLMASETQLNHLQQSDENLTQLQTQHELLQESYNKLQDEANHTQQQFHQAQNEL 755 Query: 1662 RA---EVRKFQVEKSQLDEKAMLLETKYNDLVNKEQAWKRDEDTVKKTTDSQRQEIEKLA 1718 A ++ F+ +L +K ++ + +DL + W+ D Q+ E++ Sbjct: 756 DAAHQQLALFKQNNEELTDKCSNIQNELHDLNRVKTNWENLNTEHNLLQDKYAQQKEQMQ 815 Query: 1719 KELDNL---KAENSKLKEA-NEDRSEIDDLMLLVTDLDEKNAKYRSKL 1762 E NL +AE+ L+E+ N+ ++E++++ +T+L+E NA+Y+ L Sbjct: 816 HEHSNLAQIQAEHELLQESYNKVKAELNEIQ--ITNLNEANAQYQDLL 861 Score = 79.7 bits (195), Expect = 7e-17 Identities = 176/921 (19%), Positives = 368/921 (39%), Gaps = 160/921 (17%) Query: 760 LTEKLIALTNEHKELDEKYQI--LNSSHSSLKENFSILETELKNVRDSLDEMTQLRDVLE 817 L ++L+ + H ++E + + + + + +FSI + N+ ++L + ++ Sbjct: 232 LVDELVTVPLTHTLVNESAPVTPVVVTSPAAEHSFSITTVDKANLTNALSQTVVIKPA-- 289 Query: 818 TKDKENQTALLEYKSTIHKQEDSIKTLEKGLETILSQKKKAEDGINKMGKDLFALSREMQ 877 +D +Q+A+L+ + I ++ ++ L+ +E L Q + + MG + + L Sbjct: 290 -EDSAHQSAVLDKE--IATKQAQLQQLQAQIE--LRQAQLETPPVTYMGVEEYKLLPVQD 344 Query: 878 AVEEN------CKNLQKEKDKSNVNHQKETKSLKEDIAAKIT--EIKAINENLEEMKIQC 929 V LQ++ DK+ ++ L+E +A + + + E +E ++ Q Sbjct: 345 VVPVQPTVSFEMTLLQEQLDKALKHNAALQIQLEEQLAKPLQYDQSPVLQERIELLQNQN 404 Query: 930 NNLSKEKEHISKELVEYKSRFQSHDNLVAKLTEKLKSLA----NNYKDMQAENESLIKAV 985 NL++E + ++L +KS Q++ L+A+L E+ ++L NN + N L K + Sbjct: 405 TNLTQELNELQQKL--FKS--QNNSLLLARLEEENRTLKQHLQNNLPEANQLNFVLEKQL 460 Query: 986 EE-SKNESSIQLSNLQNKIDSMSQEKENFQIERGSIEKNIEQLKKTISDLEQTXXXXXXX 1044 E+ +++ S+ L Q K DS +++ I S+ I L+ + L+QT Sbjct: 461 EQLQQDKHSLTLQIEQYKFDSKKHQEQLALIP--SLRSEINSLETEVISLKQT------- 511 Query: 1045 XXXXXXXXXXQISLLKEKLETATTANDENVNKISELTKTREELEAELAAYKNLKNELETK 1104 ++L N+ +I +L +T+ L E Y+NL + E Sbjct: 512 ---------------NQRLSLIERENNFLKTEIKQLRETK--LNDENTKYRNLLKQYELM 554 Query: 1105 LETSEKALXXXXXXXXXXXXXXIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKY 1164 S+ L +LE E Q H++ AQL+++ Sbjct: 555 RADSDAKLK--------------ELEHEQHLAHQH--------------HQEQLAQLQRH 586 Query: 1165 EEQIANKERQYNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNLKKSE 1224 E + + Q +L +Q+ +++KN L ++A + + Sbjct: 587 NEALVKELDQVKATNFELGLAAQGFEQQKVVLEQKNSSLLASLQAAEENVQALGITNSEL 646 Query: 1225 IDALNLQIKELKKKNETNEASLLESIKSVESETVKIKELQDECNFKEKEVSELEDKLKAS 1284 + LN+ K+K + +L + + +E + Q++ +++ L DKL AS Sbjct: 647 QNQLNVLEFTHKEKTAFDSKTLTLTKQQLEQTQFDLSLTQEQLATFKQQNQSLTDKLMAS 706 Query: 1285 E-------DKNSKYLELQKESEKIKEELDAKTTELKIQLEKITNXXXXXXXXXXXXXXXX 1337 E + +LQ + E ++E + K+Q ++ + Sbjct: 707 ETQLNHLQQSDENLTQLQTQHELLQESYN------KLQ-DEANHTQQQFHQAQNELDAAH 759 Query: 1338 XXXXXXRKNAEEQLEKLKNEIQIKNQAFEKER-----KLLNEGSSTITQEYSEKINTLED 1392 ++N EE +K N I+N+ + R + LN + + +Y+++ ++ Sbjct: 760 QQLALFKQNNEELTDKCSN---IQNELHDLNRVKTNWENLNTEHNLLQDKYAQQKEQMQH 816 Query: 1393 E---LIRLQNENELKAKEIDNTRSELEKVSLSNDELLEEKQNTIKSLQDEILSYKDKITR 1449 E L ++Q E+EL + + ++EL ++ ++N N + ++LS + + Sbjct: 817 EHSNLAQIQAEHELLQESYNKVKAELNEIQITN-------LNEANAQYQDLLSAYELLQS 869 Query: 1450 NDEKL---LSIERDNKRDLESLKEQLRAAQESXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1506 N KL L + + + L ++L +S Sbjct: 870 NHNKLKQELQVLNQVNLEKQQLAQKLHNTHQSLSQT------------------------ 905 Query: 1507 XXXXXXTIESNETELKSSMETIRK----SDEKLEQSKKSAEEDIKNLQHEKSDLISRINE 1562 + T+L+++ ++ SDE LEQ + E + LQ ++ ++E Sbjct: 906 --------HAELTQLQAAYNNLQATPPVSDELLEQFNQVQLEKQRLLQQN----LALVHE 953 Query: 1563 SEKDIEELKSKLRIEAKSGSELETVKQELNNAQEKIRINAEENTVLKSKLEDIERELKDK 1622 + EL S E K+ + ETVK E+ +++I + E+ LK + DI E K+ Sbjct: 954 LQY-FNELNSSQTHEIKTKQD-ETVK-EVIIVEKEIPVPPEKKPRLKKR--DIVIENKED 1008 Query: 1623 QAEIKSNQEEKELLTSRLKEL 1643 S +E + RL ++ Sbjct: 1009 ALGKLSKKERIQAYAERLAKI 1029 Score = 70.9 bits (172), Expect = 3e-14 Identities = 114/606 (18%), Positives = 245/606 (40%), Gaps = 82/606 (13%) Query: 720 DEEPINKISFEEVEKLQRQCTKLKGEITSLQTETESTHENLTEKLIALTNEHKELDEKYQ 779 D+ P+ + E +E LQ Q T L E+ LQ + + N + L L E++ L + Q Sbjct: 388 DQSPVLQ---ERIELLQNQNTNLTQELNELQQKLFKSQNN-SLLLARLEEENRTLKQHLQ 443 Query: 780 ILNSSHSSLKENFSILETELKNVRDSLDEMT-QLRDV-LETKDKENQTALL-EYKSTIHK 836 N+ + + NF +LE +L+ ++ +T Q+ ++K + Q AL+ +S I+ Sbjct: 444 --NNLPEANQLNF-VLEKQLEQLQQDKHSLTLQIEQYKFDSKKHQEQLALIPSLRSEINS 500 Query: 837 QEDSIKTLEKG-------------LETILSQKKKAE-DGINKMGKDLFALSREMQAVEE- 881 E + +L++ L+T + Q ++ + + N ++L M+A + Sbjct: 501 LETEVISLKQTNQRLSLIERENNFLKTEIKQLRETKLNDENTKYRNLLKQYELMRADSDA 560 Query: 882 NCKNLQKEKDKSNVNHQKETKSLKEDIAAKITEIKAINENLEEMKIQCNNLSKEKEHISK 941 K L+ E+ ++ +HQ++ L+ A + E+ + E+ + ++K + + Sbjct: 561 KLKELEHEQHLAHQHHQEQLAQLQRHNEALVKELDQVKATNFELGLAAQGFEQQKVVLEQ 620 Query: 942 ELVEYKSRFQSHDNLV-------AKLTEKLKSLANNYKDMQAENESLIKAVEESKNESSI 994 + + Q+ + V ++L +L L +K+ A + + ++ ++ Sbjct: 621 KNSSLLASLQAAEENVQALGITNSELQNQLNVLEFTHKEKTAFDSKTLTLTKQQLEQTQF 680 Query: 995 QLSNLQNKIDSMSQEKENFQIERGSIEKNIEQLKKTISDLEQTXXXX------------- 1041 LS Q ++ + Q+ ++ + + E + L+++ +L Q Sbjct: 681 DLSLTQEQLATFKQQNQSLTDKLMASETQLNHLQQSDENLTQLQTQHELLQESYNKLQDE 740 Query: 1042 XXXXXXXXXXXXXQISLLKEKLETATTANDENVNKISELTKTREELEAELAAYKNLKNE- 1100 ++ ++L N+E +K S + +L ++NL E Sbjct: 741 ANHTQQQFHQAQNELDAAHQQLALFKQNNEELTDKCSNIQNELHDLNRVKTNWENLNTEH 800 Query: 1101 --LETKLETSEKALXXXXXXXXXXXXXXIQLEKEATETKQQLNSLR-ANLESLEKEHEDL 1157 L+ K ++ + L++ + K +LN ++ NL +++DL Sbjct: 801 NLLQDKYAQQKEQMQHEHSNLAQIQAEHELLQESYNKVKAELNEIQITNLNEANAQYQDL 860 Query: 1158 AA--------------------QLKKYEEQIANKERQYNEEISQLNDEITSTQQENESIK 1197 + Q+ ++Q+A K ++ +SQ + E+T Q +++ Sbjct: 861 LSAYELLQSNHNKLKQELQVLNQVNLEKQQLAQKLHNTHQSLSQTHAELTQLQAAYNNLQ 920 Query: 1198 KK---NDELEGEVKAMKSTSEEQSNLKKSEIDALNLQ-IKELKKKNETNEASLLESIKSV 1253 +DEL + Q L+K + NL + EL+ NE N +S IK+ Sbjct: 921 ATPPVSDELLEQF--------NQVQLEKQRLLQQNLALVHELQYFNELN-SSQTHEIKTK 971 Query: 1254 ESETVK 1259 + ETVK Sbjct: 972 QDETVK 977 Score = 52.4 bits (124), Expect = 1e-08 Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 25/201 (12%) Query: 1586 TVKQELNNAQEKIRINAEENTVLKSKLED-IERELKDKQAEIKSNQEEKELLTSRLKELE 1644 TV E+ QE++ + N L+ +LE+ + + L+ Q+ + QE ELL ++ L Sbjct: 351 TVSFEMTLLQEQLDKALKHNAALQIQLEEQLAKPLQYDQSPVL--QERIELLQNQNTNLT 408 Query: 1645 QELDSTQQKAQKS----------EEERRAEVRKFQVEKSQLDEKAMLLETKYNDLVNKEQ 1694 QEL+ QQK KS EEE R + Q + ++ +LE + L + Sbjct: 409 QELNELQQKLFKSQNNSLLLARLEEENRTLKQHLQNNLPEANQLNFVLEKQLEQLQQDKH 468 Query: 1695 AWKRDEDTVKKTTDSQRQE---IEKLAKELDNLKAENSKLKEANEDRSEIDD-------- 1743 + + K + +++ I L E+++L+ E LK+ N+ S I+ Sbjct: 469 SLTLQIEQYKFDSKKHQEQLALIPSLRSEINSLETEVISLKQTNQRLSLIERENNFLKTE 528 Query: 1744 -LMLLVTDLDEKNAKYRSKLK 1763 L T L+++N KYR+ LK Sbjct: 529 IKQLRETKLNDENTKYRNLLK 549 >MGEN-G37-01-000335 MG328 conserved hypothetical protein Length = 756 Score = 84.3 bits (207), Expect = 3e-18 Identities = 140/731 (19%), Positives = 307/731 (41%), Gaps = 129/731 (17%) Query: 769 NEHKELDEKYQILNSSHSSLK-ENFSILETELKNVRDSLDEMTQLRDVLETKDKENQTAL 827 N+ K +E+ Q ++ + + + ++ S+L E+K L + + + K T Sbjct: 93 NQLKTREEEQQTVDQTMAFQEVDDQSVLTKEIKTGFQELKPSVITAEDDKDEIKPEATKQ 152 Query: 828 LEYKSTIHKQEDSIKTLEKGLETILSQKKKAEDGINKMGKDLFALSREMQAVEENCKNLQ 887 + ++ ++ + I +K I S K E + D +++ +A+ K +Q Sbjct: 153 VSFEELFNQPSEEINETKKPEVQIFSTDKVKEP---EQFDDFYSIENLTKAINPVHKTIQ 209 Query: 888 KEKDKSNVNHQKETKSLKEDIAAKITEIKAINENLEEMKIQCNNLSKE----KEHISKEL 943 +++ K + LKE K + + + N +E+ ++ +L K+ KE+ + ++ Sbjct: 210 YDQNDDQPFVVK--RILKEQHPTKKVD-ELDDYNNKELLLENADLKKQIDDLKENNNDQI 266 Query: 944 VEYKSRFQSHDNLVAKLTEKLKSLANNYK---DMQAENESLIKAVEESKNESSIQLSNLQ 1000 + + Q D+L +L+E+ + K D+ EN L + ++ + ++ L Sbjct: 267 FDLE---QEIDDLKRRLSEEKSKHLHTKKLQDDLLQENRDLYEQLQNKP----VAINPLS 319 Query: 1001 NKIDSMSQEKENFQIERGSIEKNIEQLKKTISDLEQTXXXXXXXXXXXXXXXXXQISLLK 1060 D +++E EN + E+ + ++ LK S+++Q QI+ L+ Sbjct: 320 ---DEVNEELENLKQEKALLSDQLDALKNKSSNVQQQLALLPVLNN--------QINELQ 368 Query: 1061 EKLETATTAND-------ENVNKISELTKTREELEA-ELAAYKNLKNELETKLETSEKAL 1112 +L TA AN EN +EL K + E Y +L N+ E + +E Sbjct: 369 NQLLTAREANQRLDLVEQENDFLKNELKKLHDNTSNDENEKYDDLLNQYELLFDENETKF 428 Query: 1113 XXXXXXXXXXXXXXIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIANKE 1172 +Q++++A Q + +L+ E++ L ++ E +K+ Sbjct: 429 DK------------LQVKQQALNLDYQ-----KTISALKHENDVLLDEI----EWTRSKD 467 Query: 1173 RQYNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDALNLQI 1232 +N + ++ + ++ + +N +L+ ++ ++ +EE+SNL +++ L Q+ Sbjct: 468 NDFNNTKNSFEEQKKALDEKLNGLTIQNQQLQDKIAELEEWNEEKSNLNTNQLVNLQQQL 527 Query: 1233 KELKKKNETNEASLLESIKSVESETVKIKELQDECNFKEKEVSELEDKLKASEDKNSKYL 1292 K+ +N N A + + ++E + + E ++++LED+L SE+ N+ Sbjct: 528 KD--SQNLFNVAQ--DKLATLEEVNLALNE----------KINDLEDELSGSENSNNLLA 573 Query: 1293 ELQKESEKIKEELDAKTTELKIQLEKITNXXXXXXXXXXXXXXXXXXXXXXRKNAEEQLE 1352 +LQ + E ++E +LK EK+ +A EQ + Sbjct: 574 KLQADHEILQESYG----KLKTDFEKLKKNKL--------------------NDANEQYQ 609 Query: 1353 KLKNEIQIKNQAFEKERKLLNEGSSTITQEYSEKINTLEDELIRLQNENELKAKEIDNTR 1412 L + + N EK ++ L+ S Q ++IN+LE N + Sbjct: 610 DLLSAFEETNSELEKAKQSLSASDSENNQ-LKQQINSLE------------------NAK 650 Query: 1413 SELEKVSLSNDELLEEKQNTIKSLQDEI----------LSYKDKITRNDEKLLSIERDNK 1462 EL+ +++DE L+E + T+K ++++ L Y + I+ N + + D Sbjct: 651 KELQFTPVTSDEHLDELE-TLKIEKEQLFLENQALQNQLQYFNDISANQTEEIKEASDED 709 Query: 1463 RDLESLKEQLR 1473 + +E K +++ Sbjct: 710 KPVEIKKPRIK 720 Score = 82.4 bits (202), Expect = 1e-17 Identities = 154/713 (21%), Positives = 296/713 (41%), Gaps = 133/713 (18%) Query: 656 DNYASRIK-----QFKKDSYFSKVDMNEDSILTPELDETGLPKVYFSTYFIQLFNENIYR 710 ++YA+++K Q D + ++++ S+LT E+ +TG F E Sbjct: 89 NHYANQLKTREEEQQTVDQTMAFQEVDDQSVLTKEI-KTG-------------FQELKPS 134 Query: 711 IRTALSHDPDE---EPINKISFEEVEKLQRQCTKLKGEITSLQTETESTHENLTEKLIAL 767 + TA D DE E ++SFEE L Q ++ E + + ST + Sbjct: 135 VITA-EDDKDEIKPEATKQVSFEE---LFNQPSEEINETKKPEVQIFSTDK--------- 181 Query: 768 TNEHKELDEKYQI------LNSSHSSLKENFSILETELKNVRDSLDEMTQLRDVLETKDK 821 E ++ D+ Y I +N H +++ + + + + V+ L E + V E D Sbjct: 182 VKEPEQFDDFYSIENLTKAINPVHKTIQYDQN--DDQPFVVKRILKEQHPTKKVDELDDY 239 Query: 822 ENQTALLEYKSTIHKQEDSIKT--------LEKGLETI---LSQKK-------KAEDGIN 863 N+ LLE + + KQ D +K LE+ ++ + LS++K K +D + Sbjct: 240 NNKELLLE-NADLKKQIDDLKENNNDQIFDLEQEIDDLKRRLSEEKSKHLHTKKLQDDLL 298 Query: 864 KMGKDLF--------ALSREMQAVEENCKNLQKEKDKSNVNHQKETKSLKEDIAAKITEI 915 + +DL+ A++ V E +NL++EK + + K+ ++ ++ + Sbjct: 299 QENRDLYEQLQNKPVAINPLSDEVNEELENLKQEKALLS-DQLDALKNKSSNVQQQLALL 357 Query: 916 KAINENLEEMKIQCNNLSKEKEHISKELVEYKSRF------QSHDNLVAKLTEKLKSLAN 969 +N + E++ Q + + + +LVE ++ F + HDN EK L N Sbjct: 358 PVLNNQINELQNQLLTAREANQRL--DLVEQENDFLKNELKKLHDNTSNDENEKYDDLLN 415 Query: 970 NYKDMQAENESLIKAVEESKNESSIQLSNLQNKIDSMSQEKENFQIERGSIEKNIEQLKK 1029 Y+ + ENE+ ++ + ++ + Q I ++ E + E IE + Sbjct: 416 QYELLFDENETKFDKLQVKQQALNL---DYQKTISALKHENDVLLDE-------IEWTRS 465 Query: 1030 TISDLEQTXXXXXXXXXXXXXXXXXQISLLKEKLETATTANDENVNKISELTKTREE--- 1086 +D T Q L EKL T N + +KI+EL + EE Sbjct: 466 KDNDFNNTKNSFEE-----------QKKALDEKLNGLTIQNQQLQDKIAELEEWNEEKSN 514 Query: 1087 --------LEAELAAYKNLKNELETKLETSEKALXXXXXXXXXXXXXXIQLEKEATETKQ 1138 L+ +L +NL N + KL T E+ LE E + ++ Sbjct: 515 LNTNQLVNLQQQLKDSQNLFNVAQDKLATLEEVNLALNEKIN-------DLEDELSGSEN 567 Query: 1139 QLN---SLRANLESLEKEHEDLAA---QLKKYEEQIANKERQ--------YNEEISQLND 1184 N L+A+ E L++ + L +LKK + AN++ Q N E+ + Sbjct: 568 SNNLLAKLQADHEILQESYGKLKTDFEKLKKNKLNDANEQYQDLLSAFEETNSELEKAKQ 627 Query: 1185 EITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDALNLQIKELKKKNETNEA 1244 ++++ EN +K++ + LE K ++ T S+ E++ L ++ ++L +N+ + Sbjct: 628 SLSASDSENNQLKQQINSLENAKKELQFTPVT-SDEHLDELETLKIEKEQLFLENQALQN 686 Query: 1245 SLLESIKSVESETVKIKELQDECNFKEKEVSELEDKLKASEDKNSKYLELQKE 1297 L ++T +IKE DE E + ++ + ++K+ K +L K+ Sbjct: 687 QLQYFNDISANQTEEIKEASDEDKPVEIKKPRIKKRDFVIQNKDDKLAKLSKK 739 Score = 75.5 bits (184), Expect = 1e-15 Identities = 123/638 (19%), Positives = 254/638 (39%), Gaps = 79/638 (12%) Query: 1137 KQQLNSLRANLESLEKEHE--DLAAQLKKYEEQIANKERQYNEEISQLNDEITSTQQENE 1194 K LN L++ E+E + D ++ ++Q ++ +L + + + + + Sbjct: 85 KNVLNHYANQLKTREEEQQTVDQTMAFQEVDDQSV-LTKEIKTGFQELKPSVITAEDDKD 143 Query: 1195 SIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDALNL-QIKELKKKNETNEASLLESIKSV 1253 IK + + + SEE + KK E+ + ++KE ++ ++ L + Sbjct: 144 EIKPEATKQVSFEELFNQPSEEINETKKPEVQIFSTDKVKEPEQFDDFYSIENLTKAINP 203 Query: 1254 ESETVKIKELQDECNFKEKEVSELEDKLKASE--DKNSKYL-----ELQKESEKIKEELD 1306 +T++ + D+ ++ + E K E D N+K L +L+K+ + +KE + Sbjct: 204 VHKTIQYDQNDDQPFVVKRILKEQHPTKKVDELDDYNNKELLLENADLKKQIDDLKENNN 263 Query: 1307 AKTTELKIQLEKITNXXXXXXXXXXXXXXXXXXXXXXRKNAEEQLEK-------LKNEIQ 1359 + +L+ +++ + ++ EQL+ L +E+ Sbjct: 264 DQIFDLEQEIDDLKRRLSEEKSKHLHTKKLQDDLLQENRDLYEQLQNKPVAINPLSDEVN 323 Query: 1360 IKNQAFEKERKLLNE------GSSTITQEYSEKINTLEDELIRLQNENELKAKEIDNTRS 1413 + + ++E+ LL++ S+ Q+ + L +++ LQN+ L A+E + Sbjct: 324 EELENLKQEKALLSDQLDALKNKSSNVQQQLALLPVLNNQINELQNQL-LTAREANQ--- 379 Query: 1414 ELEKVSLSNDELLEE-KQNTIKSLQDEILSYKDKITRNDEKLLSIERDNKRDLESLKEQL 1472 L+ V ND L E K+ + DE Y D + N +LL E + K D +K+Q Sbjct: 380 RLDLVEQENDFLKNELKKLHDNTSNDENEKYDDLL--NQYELLFDENETKFDKLQVKQQ- 436 Query: 1473 RAAQESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIESNETELKSSMETIRKSD 1532 ++ L +E R D Sbjct: 437 -----------------------------ALNLDYQKTISALKHENDVLLDEIEWTRSKD 467 Query: 1533 EKLEQSKKSAEEDIKNLQHEKSDLISRINESEKDIEELKSKLRIEAK-SGSELETVKQEL 1591 +K S EE K L + + L + + + I EL+ ++ + ++L ++Q+L Sbjct: 468 NDFNNTKNSFEEQKKALDEKLNGLTIQNQQLQDKIAELEEWNEEKSNLNTNQLVNLQQQL 527 Query: 1592 -------NNAQEKIRINAEENTVLKSKLEDIERELKDKQAE---IKSNQEEKELLTSRLK 1641 N AQ+K+ E N L K+ D+E EL + + Q + E+L Sbjct: 528 KDSQNLFNVAQDKLATLEEVNLALNEKINDLEDELSGSENSNNLLAKLQADHEILQESYG 587 Query: 1642 ELEQELDSTQQ-KAQKSEEERRAEVRKFQVEKSQLDEKAMLL---ETKYNDL---VNKEQ 1694 +L+ + + ++ K + E+ + + F+ S+L++ L +++ N L +N + Sbjct: 588 KLKTDFEKLKKNKLNDANEQYQDLLSAFEETNSELEKAKQSLSASDSENNQLKQQINSLE 647 Query: 1695 AWKRDEDTVKKTTDSQRQEIEKLAKELDNLKAENSKLK 1732 K++ T+D E+E L E + L EN L+ Sbjct: 648 NAKKELQFTPVTSDEHLDELETLKIEKEQLFLENQALQ 685 Score = 73.6 bits (179), Expect = 5e-15 Identities = 155/821 (18%), Positives = 315/821 (38%), Gaps = 120/821 (14%) Query: 796 ETELKNVRDSLDEMTQLRDVLETKDKENQTALLEYKSTIHKQEDSIKTLEKGLETILSQK 855 E E+ + + LDE T L+++++ + N K T E ++ LEK + + Sbjct: 6 ELEISDFDNELDEKTLLKELVQ---RTNNILFSPSKITAIPFERNL--LEKTFFGTVDEA 60 Query: 856 KKAEDGINKMGKDLFALSREMQAVEENCKNLQKEKDKSNVNHQKETKSLKEDIAAKITEI 915 +K + ++ + + K L K+ DK+ +NH +E+ + + Sbjct: 61 EKEKSIVSFFNWMI------------DLKVLDKKWDKNVLNHYANQLKTREEEQQTVDQT 108 Query: 916 KAINE-------------NLEEMKIQCNNLSKEKEHISKELVEYKSRFQSHDNLVAKLTE 962 A E +E+K +K+ I E + S + L + +E Sbjct: 109 MAFQEVDDQSVLTKEIKTGFQELKPSVITAEDDKDEIKPEATKQVS----FEELFNQPSE 164 Query: 963 KLKSLANNYKDMQAENESLIKAVEESKNESSIQLSNLQNKIDSMSQEKENFQIE-RGSIE 1021 ++ N K + + S K E + + + NL I+ + + + Q + + + Sbjct: 165 EI----NETKKPEVQIFSTDKVKEPEQFDDFYSIENLTKAINPVHKTIQYDQNDDQPFVV 220 Query: 1022 KNIEQLKKTISDLEQTXXXXXXXXXXXXXXXXXQISLLKEKLETATTANDENVNKISELT 1081 K I + + +++ QI LKE ND+ + E+ Sbjct: 221 KRILKEQHPTKKVDELDDYNNKELLLENADLKKQIDDLKEN------NNDQIFDLEQEID 274 Query: 1082 KTREELEAELAAYKNLKNELETKLETSEKALXXXXXXXXXXXXXXIQLEKEATETKQQLN 1141 + L E + + + K + L+ + QL+ + + Sbjct: 275 DLKRRLSEEKSKHLHTKKLQDDLLQENRDLYE--------------QLQNKPVAINPLSD 320 Query: 1142 SLRANLESLEKEHEDLAAQLKKYEEQIANKERQY------NEEISQLNDEITSTQQENES 1195 + LE+L++E L+ QL + + +N ++Q N +I++L +++ + ++ N+ Sbjct: 321 EVNEELENLKQEKALLSDQLDALKNKSSNVQQQLALLPVLNNQINELQNQLLTAREANQR 380 Query: 1196 ---IKKKNDELEGEVKAMKSTSEEQSNLKKSEIDALNLQIKELKKKNETNEASLLESIKS 1252 ++++ND L+ E+K + + N K D LN Q + L +NET L Sbjct: 381 LDLVEQENDFLKNELKKLHDNTSNDENEKYD--DLLN-QYELLFDENETKFDKL-----Q 432 Query: 1253 VESETVKIKELQDECNFKEKEVSELEDKLKASEDKNSKYLELQKESEKIKEELDAKTTEL 1312 V+ + + + + Q + + E L D+++ + K++ + + E+ K+ LD K L Sbjct: 433 VKQQALNL-DYQKTISALKHENDVLLDEIEWTRSKDNDFNNTKNSFEEQKKALDEKLNGL 491 Query: 1313 KIQLEKITNXXXXXXXXXXXXXXXXXXXXXXRKNAEEQLEKLKNEIQIKNQAFEKERKLL 1372 IQ +++ + + + + L N Q K E+ L Sbjct: 492 TIQNQQLQDKIAELEEWNEEKSNLNTNQLVNLQQQLKDSQNLFNVAQDKLATLEEVNLAL 551 Query: 1373 NEGSSTITQEYSEKINTLEDELIRLQNENELKAKEIDNTRSELEKVSLSNDELLEEKQNT 1432 NE KIN LEDEL +N N L AK ++ E+L+E Sbjct: 552 NE-----------KINDLEDELSGSENSNNLLAK------------LQADHEILQESYGK 588 Query: 1433 IKSLQDEILSYKDKITRNDEK---LLSIERDNKRDLESLKEQLRAAQESXXXXXXXXXXX 1489 +K+ +++ K+K+ +E+ LLS + +LE K+ L +A +S Sbjct: 589 LKTDFEKL--KKNKLNDANEQYQDLLSAFEETNSELEKAKQSL-SASDSENNQLKQQINS 645 Query: 1490 XXXXXXXXXXXXXXXXXXXXXXXTIESNETELKSSMETIRK--------SDEKLEQSKKS 1541 T++ + +L + ++ S + E+ K++ Sbjct: 646 LENAKKELQFTPVTSDEHLDELETLKIEKEQLFLENQALQNQLQYFNDISANQTEEIKEA 705 Query: 1542 AEED----IKNLQHEKSDLISRINESEKDIEELKSKLRIEA 1578 ++ED IK + +K D + I + + +L K RI+A Sbjct: 706 SDEDKPVEIKKPRIKKRDFV--IQNKDDKLAKLSKKERIQA 744 Score = 72.0 bits (175), Expect = 2e-14 Identities = 113/603 (18%), Positives = 238/603 (39%), Gaps = 54/603 (8%) Query: 663 KQFKKDSYFSKVDMNEDSILTPEL-----DETGLPKVYFSTYFIQLFNENIYRIRTALSH 717 KQ + F++ + PE+ D+ P+ + Y I+ + I + + + Sbjct: 151 KQVSFEELFNQPSEEINETKKPEVQIFSTDKVKEPEQFDDFYSIENLTKAINPVHKTIQY 210 Query: 718 DP-DEEP--INKISFEE-----VEKLQRQCTK-LKGEITSLQTETESTHENLTEKLIALT 768 D D++P + +I E+ V++L K L E L+ + + EN +++ L Sbjct: 211 DQNDDQPFVVKRILKEQHPTKKVDELDDYNNKELLLENADLKKQIDDLKENNNDQIFDLE 270 Query: 769 NEHKELDEKYQILNSSHSSLKENFSILETELKNVRDSLDEMTQLRDVLETKDKENQTALL 828 E +L + S H K+ L E +++ + L + L + E L Sbjct: 271 QEIDDLKRRLSEEKSKHLHTKKLQDDLLQENRDLYEQLQNKPVAINPLSDEVNEELENLK 330 Query: 829 EYKSTIHKQEDSIKTLEKGLETILSQKKKAEDGINKMGKDLFAL---SREMQAVEENCKN 885 + K+ + Q D++K ++ L+ + IN++ L ++ + VE+ Sbjct: 331 QEKALLSDQLDALKNKSSNVQQQLALLPVLNNQINELQNQLLTAREANQRLDLVEQENDF 390 Query: 886 LQKEKDKSNVNHQKETKSLKEDIAAKITEIKAINENLEEMKIQCNNLSKEKEHISKELVE 945 L+ E K + N + +D+ + + +E + + + L +++ ++ + + Sbjct: 391 LKNELKKLHDNTSNDENEKYDDLLNQYELL------FDENETKFDKLQVKQQALNLDYQK 444 Query: 946 YKSRFQSHDNLVAKLTEKLKSLANNYKDMQAENESLIKAVEESKNESSIQLSNLQNKI-- 1003 S + ++++ E +S N++ + + E KA++E N +IQ LQ+KI Sbjct: 445 TISALKHENDVLLDEIEWTRSKDNDFNNTKNSFEEQKKALDEKLNGLTIQNQQLQDKIAE 504 Query: 1004 -DSMSQEKENFQIERGSIEKNIEQLKKTISDLEQTXXXXXXXXXXXXXXXXXQISLLKEK 1062 + ++EK N + N++Q K +L +I+ L+++ Sbjct: 505 LEEWNEEKSNLNTNQ---LVNLQQQLKDSQNLFNVAQDKLATLEEVNLALNEKINDLEDE 561 Query: 1063 LETATTANDENVNKISELTKTREELEAELAAYKN-----LKNELETKLETSEKALXXXXX 1117 L + +N N +++L E L+ K KN+L E + L Sbjct: 562 LSGSENSN----NLLAKLQADHEILQESYGKLKTDFEKLKKNKLNDANEQYQDLLSAFEE 617 Query: 1118 XXXXXXXXXIQL---EKEATETKQQLNSLRANLESLE------KEHEDLAAQLKKYEEQI 1168 L + E + KQQ+NSL + L+ EH D LK +EQ+ Sbjct: 618 TNSELEKAKQSLSASDSENNQLKQQINSLENAKKELQFTPVTSDEHLDELETLKIEKEQL 677 Query: 1169 ANKERQYNEEISQLND-------EITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNLK 1221 + + ++ ND EI E++ ++ K ++ +++ ++ + L Sbjct: 678 FLENQALQNQLQYFNDISANQTEEIKEASDEDKPVEIKKPRIKKRDFVIQNKDDKLAKLS 737 Query: 1222 KSE 1224 K E Sbjct: 738 KKE 740 Score = 53.5 bits (127), Expect = 6e-09 Identities = 117/649 (18%), Positives = 249/649 (38%), Gaps = 149/649 (22%) Query: 1178 EISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSE------------EQSNLKKSEI 1225 EIS ++E+ E +++ N+ L K E +++ +KS + Sbjct: 8 EISDFDNELDEKTLLKELVQRTNNILFSPSKITAIPFERNLLEKTFFGTVDEAEKEKSIV 67 Query: 1226 DALN--LQIKELKKKNETNEASLLESIKSVESETVKIKELQDECNFKEKEVSELEDKLKA 1283 N + +K L KK + N + + + +K +E + + + E++D+ Sbjct: 68 SFFNWMIDLKVLDKKWDKN-------VLNHYANQLKTREEEQQTVDQTMAFQEVDDQSVL 120 Query: 1284 SEDKNSKYLELQKE---SEKIKEELDAKTTELKIQLEKITNXXXXXXXXXXXXXXXXXXX 1340 +++ + + EL+ +E K+E+ + T+ ++ E++ N Sbjct: 121 TKEIKTGFQELKPSVITAEDDKDEIKPEATK-QVSFEELFN------------------- 160 Query: 1341 XXXRKNAEEQLEKLKNEIQIKNQAFEKERKLLNEGSSTITQEYSEKINTLEDELIRLQNE 1400 + +EE E K E+QI + KE + ++ S + ++ IN + + QN+ Sbjct: 161 ----QPSEEINETKKPEVQIFSTDKVKEPEQFDDFYSI--ENLTKAINPVHKTIQYDQND 214 Query: 1401 NELKA-----KEIDNTRSELEKVSLSNDELLEEKQNTIKSLQDEILSYKDKITRNDEKLL 1455 ++ KE T+ E +N ELL E + K + D + D+I ++++ Sbjct: 215 DQPFVVKRILKEQHPTKKVDELDDYNNKELLLENADLKKQIDDLKENNNDQIFDLEQEID 274 Query: 1456 SIER----DNKRDLESLKEQLRAAQESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1511 ++R + + L + K Q QE+ Sbjct: 275 DLKRRLSEEKSKHLHTKKLQDDLLQEN--------------------------------- 301 Query: 1512 XTIESNETELKSSMETIRKSDEKLEQSKKSAEEDIKNLQHEK---SDLISRINESEKDIE 1568 + E ++ + E+++NL+ EK SD + + +++ Sbjct: 302 ----------RDLYEQLQNKPVAINPLSDEVNEELENLKQEKALLSDQLDALKNKSSNVQ 351 Query: 1569 ELKSKLRIEAKSGSELETVKQELNNAQEKIRINAEENTVLKSKLEDIERELKDKQAEIKS 1628 + + L + +EL+ A +++ + +EN LK++L K+ + Sbjct: 352 QQLALLPVLNNQINELQNQLLTAREANQRLDLVEQENDFLKNEL---------KKLHDNT 402 Query: 1629 NQEEKELLTSRLKELEQELDSTQQKAQKSEEERRAEVRKFQVEKSQLDEKAMLLETKYND 1688 + +E E L + E D + K K + +++A +Q S L + ND Sbjct: 403 SNDENEKYDDLLNQYELLFDENETKFDKLQVKQQALNLDYQKTISALKHE--------ND 454 Query: 1689 LVNKEQAWKRDEDT-VKKTTDSQRQEIEKLAKELDNLKAEN-------SKLKEANEDRSE 1740 ++ E W R +D T +S ++ + L ++L+ L +N ++L+E NE++S Sbjct: 455 VLLDEIEWTRSKDNDFNNTKNSFEEQKKALDEKLNGLTIQNQQLQDKIAELEEWNEEKSN 514 Query: 1741 IDDLMLL-------------------VTDLDEKNAKYRSKLKDLGVEIS 1770 ++ L+ + L+E N K+ DL E+S Sbjct: 515 LNTNQLVNLQQQLKDSQNLFNVAQDKLATLEEVNLALNEKINDLEDELS 563 >SYNE-PCC-01-000727 sll1120 Length = 1200 Score = 67.4 bits (163), Expect = 4e-13 Identities = 157/977 (16%), Positives = 374/977 (38%), Gaps = 138/977 (14%) Query: 742 LKGEITSLQTETESTHENLTEKLIALTNEHKELDEKYQILNSSHSSLKENFSILETELKN 801 L+G++T + T + ++L + +++ + + L +E I+ TEL+ Sbjct: 161 LQGDVTRIITMNSKERREIIDELAGVAEFDRKIVKTKETLTEVQDR-EERCQIIATELER 219 Query: 802 V-------RDSLDEMTQLRDVLETKDKENQTALLEYKSTIHKQEDSIKTLEKGLETILSQ 854 R ++ LR + ++K+ +++YK+ +++ LE+ E Q Sbjct: 220 TLERLAADRQKAEKYQALRQ--QVQEKQGWAKVIQYKAVEQQRQKLWGQLERDRE----Q 273 Query: 855 KKKAEDGINKMGKDLFALSREMQAVEENCKNLQKEKDKSNVNHQKETKSLKEDIAAKITE 914 ++ + AL + QA++ Q E +K N + K+L E+ E Sbjct: 274 SQQIQQ----------ALDQRSQAIQTQ----QTELEKLNA----QVKALGEE------E 309 Query: 915 IKAINENLEEMKIQCNNLSKEKEHISKELVEYKSRFQSHDNLVAKLTEKLKSLANNYKDM 974 A+ L K Q + L + +++ ++ Q + A++++ + + ++ Sbjct: 310 QLAVAAQLATQKAQRDQLQQRYNDGDRQITNHQ---QQVGQIQAEISQSQQQFLHIQQEK 366 Query: 975 QAENESLIKAVEESKNESSIQLSNLQNKIDSMSQEKENFQIERGSIEKNIEQLKKTISDL 1034 N + +E + S QL L+++ +++ E + E+ + + + QL+ + Sbjct: 367 SFHNTQTLPQLEAAVQTSQQQLEQLRHQAQAIASASEAWVQEQTQLSRTVNQLQDEL--- 423 Query: 1035 EQTXXXXXXXXXXXXXXXXXQISLLKEKLETATTANDENVNKISELTKTREELEAELAAY 1094 Q++ L+E+ + T E +++++ EE + + Sbjct: 424 ---------------IPQRSQLAQLEERQQQLLTNLAELTPLLTKVSVELEEKQFAQGQF 468 Query: 1095 KNLKNELETKLETSEKALXXXXXXXXXXXXXXIQLEKEATETKQQLNSLRANLESLEKEH 1154 L ++++T L +L KE E ++QL+ L A ++ ++ Sbjct: 469 NFQGEALTSQIQTLASDLAQLEQERSLLQETQTRLLKEQQEKQRQLDKLEAASQAQQEVQ 528 Query: 1155 EDLAAQLKKYEE---------QIANKERQYNEEISQLNDEITSTQQ------ENESIKKK 1199 A ++ + Q+ E QY QL EI + + E++ + Sbjct: 529 GTYATKVILQSDLPGVCGLVAQLGQVEPQY-----QLALEIAAGGRLGFLVVEDDGVAAA 583 Query: 1200 NDELEGEVKAMKSTSEEQSNLKKSEIDALNLQIK----ELKKKNETNEASLLESIKSVES 1255 E+ + KA ++T + ++ + NL +L + + + Sbjct: 584 GIEILKQAKAGRATFLPLNKIRPPKGQNPNLSYAHGYIDLAVNLIDGDRRYADIFAFIFG 643 Query: 1256 ETVKIKELQDECNFKEK-EVSELEDKLKASEDKNSKYLELQKESEKIKEELDAKTTELKI 1314 T+ L + N K + LE L + S Q+ + + T E+K Sbjct: 644 NTIVFDTLVNARNHLGKHRIVTLEGDLLEASGAMSGGSRNQRSGLRFGTMVSEDTAEVKQ 703 Query: 1315 QLEKITNXXXXXXXXXXXXXXXXXXXXXXRKNAEEQLEKLKNEIQIKNQAFEKERKLLNE 1374 +++ + + E + + + E Q+ + E++ L++ Sbjct: 704 LRQRLQDIQQVQGRNEELLLERTVRSRQLTQQLME-MRQQQREAQLHGEQTERDIARLSQ 762 Query: 1375 GSSTITQE---YSEKINTLEDELIRLQNENELKAKEIDNTRSELEKVSLS-NDELLEEKQ 1430 + I Q+ +K+ L+ L LQ +++ + + +L + S + + Q Sbjct: 763 QQTQINQQQINQQQKLAELQQNLALLQQSLPPLEQQLASAQQQLTALETSQTHQQWQTIQ 822 Query: 1431 NTIKSLQDEILSYKDKITRNDEKLLSIERDNKRDLESLKEQLRAAQESXXXXXXXXXXXX 1490 I++++ E + + ++ L ++ ++R L+E++ AQE Sbjct: 823 IQIRTVEAEYQRQLQALRQGEDHLKDLQNSSQR----LEEKIAQAQEK------------ 866 Query: 1491 XXXXXXXXXXXXXXXXXXXXXXTIESNETELKSSMETIRKSDEKLEQSKKSAEEDIKNLQ 1550 T+ + +LK ++ + + + E E + + + Sbjct: 867 -------------IAQHQAQDLTLAQEQEQLKIALAEMNGAIQTTEAQLAKLSEKLGSTK 913 Query: 1551 HEKSDLISRINESEKDIEELKSKLRIEAKSGSELETVKQELNNAQEKIRINAEENTVLKS 1610 E+ L +++N +L+S+ + + +L+T +QE E T L++ Sbjct: 914 QERDRLETQLN-------QLRSQQQEQQWQWEKLQTNQQEYQ----------ENLTQLQT 956 Query: 1611 KLEDIERELKDKQAEIKSNQEEKEL---LTSRLKELEQELDSTQQKAQKSEEERRAEVRK 1667 +LE +E++L D EI Q+ E + L+ELE+ + + Q++ + E +++ Sbjct: 957 QLEALEQDLPDPWPEIPLLQDRDEANLDFANILEELERSIRNGQKRLEAMEPVNMLALQE 1016 Query: 1668 FQVEKSQLDEKAMLLET 1684 ++ +++L E + L+T Sbjct: 1017 YEKTEARLGELSEKLQT 1033 Score = 58.9 bits (141), Expect = 1e-10 Identities = 67/342 (19%), Positives = 143/342 (41%), Gaps = 40/342 (11%) Query: 875 EMQAVEENCK----NLQKEKDKSNVNHQKETK--SLKEDIA-----AKITEIKAINENLE 923 E+Q EE C+ L++ ++ + QK K +L++ + AK+ + KA+ + + Sbjct: 202 EVQDREERCQIIATELERTLERLAADRQKAEKYQALRQQVQEKQGWAKVIQYKAVEQQRQ 261 Query: 924 EMKIQCNNLSKEKEHISKELVEYKSRFQSHDNLVAKLTEKLKSLANNYKDMQAENESLIK 983 ++ Q ++ + I + L + Q+ + KL ++K+L E E L Sbjct: 262 KLWGQLERDREQSQQIQQALDQRSQAIQTQQTELEKLNAQVKAL--------GEEEQLAV 313 Query: 984 AVEESKNESSIQLSNLQNKIDSMSQEKENFQIERGSIEKNIEQLKKTISDLEQTXXXXXX 1043 A + + ++ Q LQ + + ++ N Q + G I+ I Q ++ ++Q Sbjct: 314 AAQLATQKA--QRDQLQQRYNDGDRQITNHQQQVGQIQAEISQSQQQFLHIQQEKSFHNT 371 Query: 1044 XX----XXXXXXXXXQISLLKEKLETATTANDENVNKISELTKTREELEAELAAYKNLKN 1099 Q+ L+ + + +A++ V + ++L++T +L+ EL ++ Sbjct: 372 QTLPQLEAAVQTSQQQLEQLRHQAQAIASASEAWVQEQTQLSRTVNQLQDELIPQRSQLA 431 Query: 1100 ELETKLETSEKALXXXXXXXXXXXXXXIQLEKEATETKQ----------QLNSLRANLES 1149 +LE E ++ L ++LE++ Q Q+ +L ++L Sbjct: 432 QLE---ERQQQLLTNLAELTPLLTKVSVELEEKQFAQGQFNFQGEALTSQIQTLASDLAQ 488 Query: 1150 LEKEHEDLAAQLKKYEEQIANKERQYN--EEISQLNDEITST 1189 LE+E L + ++ K+RQ + E SQ E+ T Sbjct: 489 LEQERSLLQETQTRLLKEQQEKQRQLDKLEAASQAQQEVQGT 530 Score = 54.3 bits (129), Expect = 3e-09 Identities = 58/313 (18%), Positives = 134/313 (42%), Gaps = 40/313 (12%) Query: 1128 QLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIANKERQYNEEISQLNDEIT 1187 QL ++ E +QQ + + E E++ A+L + + QI ++ +++++L + Sbjct: 731 QLTQQLMEMRQQQREAQLHGEQTERD----IARLSQQQTQINQQQINQQQKLAELQQNLA 786 Query: 1188 STQQENESIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDALNLQIKELKKKNETNEASLL 1247 QQ ++++ + ++ A++++ Q + + +QI+ T EA Sbjct: 787 LLQQSLPPLEQQLASAQQQLTALETSQTHQ------QWQTIQIQIR-------TVEAEYQ 833 Query: 1248 ESIKSVESETVKIKELQDECNFKEKEVSELEDKLKASEDKNSKYLELQKESEKIKEELDA 1307 ++++ +K+LQ+ E+++++ ++K+ + ++ L L +E E Sbjct: 834 RQLQALRQGEDHLKDLQNSSQRLEEKIAQAQEKIAQHQAQD---LTLAQEQE-------- 882 Query: 1308 KTTELKIQLEKITNXXXXXXXXXXXXXXXXXXXXXXRKNAEEQLEKLKNEIQIKNQAFEK 1367 +LKI L ++ R E QL +L+++ Q + +EK Sbjct: 883 ---QLKIALAEMNGAIQTTEAQLAKLSEKLGSTKQERDRLETQLNQLRSQQQEQQWQWEK 939 Query: 1368 ERKLLNEGSSTITQEYSEKINTLEDELIRLQNENELKAKEIDNTRSELEKVSLSNDELLE 1427 T QEY E + L+ +L L+ + EI + ++ +L +LE Sbjct: 940 --------LQTNQQEYQENLTQLQTQLEALEQDLPDPWPEIP-LLQDRDEANLDFANILE 990 Query: 1428 EKQNTIKSLQDEI 1440 E + +I++ Q + Sbjct: 991 ELERSIRNGQKRL 1003 Score = 51.2 bits (121), Expect = 3e-08 Identities = 124/683 (18%), Positives = 259/683 (37%), Gaps = 143/683 (20%) Query: 732 VEKLQRQCTKLKGEITSLQTETESTHENLTEKLIALTNEHKELDEKY------------- 778 V +LQ + + ++ L+ + NL E LT EL+EK Sbjct: 416 VNQLQDELIPQRSQLAQLEERQQQLLTNLAELTPLLTKVSVELEEKQFAQGQFNFQGEAL 475 Query: 779 ----QILNSSHSSLKENFSIL-ETELKNVRDSLDEMTQLRDVLETKDKENQTALLEYKST 833 Q L S + L++ S+L ET+ + +++ ++ QL D LE + Q Y + Sbjct: 476 TSQIQTLASDLAQLEQERSLLQETQTRLLKEQQEKQRQL-DKLEAASQAQQEVQGTYATK 534 Query: 834 IHKQED--SIKTLEKGLETILSQKKKA---------------EDGINKMGKDLFALSREM 876 + Q D + L L + Q + A +DG+ G ++ ++ Sbjct: 535 VILQSDLPGVCGLVAQLGQVEPQYQLALEIAAGGRLGFLVVEDDGVAAAGIEILKQAKAG 594 Query: 877 QAVEENCKNLQKEKDKS-NVNHQKETKSLKEDIAAKITEIKAINENLEEMKIQCNNLSKE 935 +A ++ K ++ N+++ L ++ I + I + L Sbjct: 595 RATFLPLNKIRPPKGQNPNLSYAHGYIDLAVNLIDGDRRYADIFAFIFGNTIVFDTLVNA 654 Query: 936 KEHISK--------ELVEYKSRFQSHDN----------LVAKLTEKLKSLANNYKDMQ-- 975 + H+ K +L+E +V++ T ++K L +D+Q Sbjct: 655 RNHLGKHRIVTLEGDLLEASGAMSGGSRNQRSGLRFGTMVSEDTAEVKQLRQRLQDIQQV 714 Query: 976 -AENESLIKAVEESKNESSIQLSNLQNKIDSMSQEKENFQIERGSIEKNIEQLKKTISDL 1034 NE L+ E +++ L ++ M Q++ Q+ E++I +L Sbjct: 715 QGRNEELLL-------ERTVRSRQLTQQLMEMRQQQREAQLHGEQTERDIARLS------ 761 Query: 1035 EQTXXXXXXXXXXXXXXXXXQISLLKEKLETATTANDENVNKISELTKTREELEAELAAY 1094 + T N + +N+ +L EL+ LA Sbjct: 762 -----------------------------QQQTQINQQQINQQQKLA----ELQQNLALL 788 Query: 1095 KNLKNELETKLETSEKALXXXXXXXXXXXXXXIQLEKEATETK--QQLNSLRA---NLES 1149 + LE +L ++++ L IQ++ E + +QL +LR +L+ Sbjct: 789 QQSLPPLEQQLASAQQQLTALETSQTHQQWQTIQIQIRTVEAEYQRQLQALRQGEDHLKD 848 Query: 1150 LEKEHEDLAAQLKKYEEQIAN----------KERQYNEEISQLNDEITSTQ-------QE 1192 L+ + L ++ + +E+IA ++ Q ++++N I +T+ ++ Sbjct: 849 LQNSSQRLEEKIAQAQEKIAQHQAQDLTLAQEQEQLKIALAEMNGAIQTTEAQLAKLSEK 908 Query: 1193 NESIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDALNLQIKELKKKNETNEASLLESIKS 1252 S K++ D LE ++ ++S +EQ + ++ + +E + +T +L + + Sbjct: 909 LGSTKQERDRLETQLNQLRSQQQEQ-QWQWEKLQTNQQEYQENLTQLQTQLEALEQDLPD 967 Query: 1253 VESETVKIKELQDECNFK--------EKEVSELEDKLKASEDKNSKYLELQKESEKIKEE 1304 E + + + +DE N E+ + + +L+A E N L+ +++E E Sbjct: 968 PWPE-IPLLQDRDEANLDFANILEELERSIRNGQKRLEAMEPVNMLALQEYEKTEARLGE 1026 Query: 1305 LDAK-------TTELKIQLEKIT 1320 L K TEL +++E T Sbjct: 1027 LSEKLQTIAGERTELLLRIENFT 1049 Score = 44.3 bits (103), Expect = 3e-06 Identities = 51/249 (20%), Positives = 114/249 (45%), Gaps = 39/249 (15%) Query: 1520 ELKSSMETIRKSDEKLEQSKKSAEEDIKNLQHEKSDLISRINESEKDIEELKSKLR-IEA 1578 EL+ ++ +++S LEQ SA++ + L+ +++ + + ++ ++R +EA Sbjct: 780 ELQQNLALLQQSLPPLEQQLASAQQQLTALE---------TSQTHQQWQTIQIQIRTVEA 830 Query: 1579 KSGSELETVKQELNNAQEKIRINAEENTVLKSKLEDIERELKDKQAEIKSNQEEKELLTS 1638 + +L+ ++Q ++ ++ + L+ K+ + ++ QA+ + +E+E L Sbjct: 831 EYQRQLQALRQ----GEDHLKDLQNSSQRLEEKIAQAQEKIAQHQAQDLTLAQEQEQLKI 886 Query: 1639 RLKELEQELDSTQQKAQKSEEERRAEVRKFQVEKSQLDEKAMLLETKYNDL--VNKEQAW 1696 L E+ + +T+ + K E K K + D LET+ N L +EQ W Sbjct: 887 ALAEMNGAIQTTEAQLAKLSE-------KLGSTKQERDR----LETQLNQLRSQQQEQQW 935 Query: 1697 KRDEDTVKKTTDSQRQEIEKLAKELDNLKAENSKLKEANEDRSEIDDLMLLVTDLDEKNA 1756 + + K T+ Q + +NL ++L+ +D + + L+ D DE N Sbjct: 936 QWE----KLQTNQQEYQ--------ENLTQLQTQLEALEQDLPDPWPEIPLLQDRDEANL 983 Query: 1757 KYRSKLKDL 1765 + + L++L Sbjct: 984 DFANILEEL 992 >SYNE-PCC-01-000943 sll1424 Length = 491 Score = 50.4 bits (119), Expect = 5e-08 Identities = 37/178 (20%), Positives = 83/178 (46%), Gaps = 10/178 (5%) Query: 1128 QLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIANKERQYNEEISQLNDEIT 1187 ++E E T +++ ++ L + + L++ EQ R +E++ L+ E Sbjct: 101 EIESELTAVREEQQLVQERSRELNRNYTKALQLLRRVSEQ----SRNLRQEVANLSAERA 156 Query: 1188 STQQENESIKKKNDELEGEVKAM-KSTSEEQSNLKKSE--IDALNLQIKELKKKNETNEA 1244 ++ +S+ ++ EL+ +VK + S+ Q + + E + Q++ L+K+ + EA Sbjct: 157 QLNEQKDSLLAESSELQSQVKLRDQELSKRQERIAQQEKVLARQREQVQSLEKRFASLEA 216 Query: 1245 SLLESIKSVESETVKIKELQDECNFKEKEVSELEDKLKASEDKNSKYLELQKESEKIK 1302 + + KI +L K+ ++ E+KL+ E + S LQ+E E+++ Sbjct: 217 QRQQLQAEINQRDTKIDQLDQAIAAKDNDIQAREEKLQGLETELS---FLQREVEELE 271 Score = 48.5 bits (114), Expect = 2e-07 Identities = 47/270 (17%), Positives = 119/270 (44%), Gaps = 33/270 (12%) Query: 1155 EDLAAQLKKYEEQIANKERQYNEEISQLNDEITSTQQENESIKKKNDELEGE----VKAM 1210 +D+ AQL+ + ++ Q ++ ++ E+T+ ++E + +++++ EL ++ + Sbjct: 79 DDILAQLRVAKTEL----EQASQAKEEIESELTAVREEQQLVQERSRELNRNYTKALQLL 134 Query: 1211 KSTSEEQSNLKKSEIDALNLQIKELKKKNETNEASLLESIKSVESETVKIKELQDECNFK 1270 + SE+ NL++ E+ L+ + +L NE ++ L ES ELQ + + Sbjct: 135 RRVSEQSRNLRQ-EVANLSAERAQL---NEQKDSLLAES-----------SELQSQVKLR 179 Query: 1271 EKEVSELEDKLKASEDKNSKYLELQKESEKIKEELDAKTTELKIQLEKITNXXXXXXXXX 1330 ++E+S+ ++++ E ++ E + EK L+A+ +L+ ++ + Sbjct: 180 DQELSKRQERIAQQEKVLARQREQVQSLEKRFASLEAQRQQLQAEINQRDTKIDQLDQAI 239 Query: 1331 XXXXXXXXXXXXXRKNAEEQLEKLKNEIQIKNQAFEKERKLLNEGSSTITQEY------- 1383 + E +L L+ E++ + ++ ++L + + + + Sbjct: 240 AAKDNDIQAREEKLQGLETELSFLQREVEELERYYQDYQELRGQQIAILRGQLLAFGGLR 299 Query: 1384 ---SEKINTLEDELIRLQNENELKAKEIDN 1410 SE + D+L+R N L+ + N Sbjct: 300 VVSSEAVTGAVDQLLRQANRTALQLVKTPN 329 Score = 47.8 bits (112), Expect = 3e-07 Identities = 38/212 (17%), Positives = 105/212 (49%), Gaps = 12/212 (5%) Query: 1520 ELKSSMETIRKSDEKLEQSKKSAEEDIKNLQHEKSDLISRINESEKDIEELKSKLRIEAK 1579 ++ + + + E+ Q+K+ E ++ ++ E+ + R E ++ + LR + Sbjct: 80 DILAQLRVAKTELEQASQAKEEIESELTAVREEQQLVQERSRELNRNYTKALQLLR---R 136 Query: 1580 SGSELETVKQELNN-AQEKIRINAEENTVLKSKLEDIERELKDKQAEIKSNQE---EKEL 1635 + ++QE+ N + E+ ++N +++++L ++ +++ ++K + E+ QE ++E Sbjct: 137 VSEQSRNLRQEVANLSAERAQLNEQKDSLL-AESSELQSQVKLRDQELSKRQERIAQQEK 195 Query: 1636 LTSRLKELEQELDSTQQKAQKSEEERRAEVRKFQVEKSQLDEKAMLLETKYNDLVNKEQA 1695 + +R +E Q L+ + ++ +AE+ + + QLD+ + K ND+ +E+ Sbjct: 196 VLARQREQVQSLEKRFASLEAQRQQLQAEINQRDTKIDQLDQ---AIAAKDNDIQAREEK 252 Query: 1696 WKRDEDTVKKTTDSQRQEIEKLAKELDNLKAE 1727 + E T + +E+E+ ++ L+ + Sbjct: 253 LQGLE-TELSFLQREVEELERYYQDYQELRGQ 283 Score = 46.2 bits (108), Expect = 9e-07 Identities = 46/230 (20%), Positives = 104/230 (45%), Gaps = 45/230 (19%) Query: 726 KISFEEVEKLQRQCTKLKGEITSLQTETESTHENLTEKLIALTNEHKELDEKYQILNSSH 785 +++ E+E+ + +++ E+T+++ E + E E N K L ++ S Sbjct: 86 RVAKTELEQASQAKEEIESELTAVREEQQLVQERSRE---LNRNYTKALQLLRRVSEQSR 142 Query: 786 SSLKE--NFSILETELKNVRDSL-DEMTQLRDVLETKDKE---NQTALLEYKSTIHKQED 839 + +E N S +L +DSL E ++L+ ++ +D+E Q + + + + +Q + Sbjct: 143 NLRQEVANLSAERAQLNEQKDSLLAESSELQSQVKLRDQELSKRQERIAQQEKVLARQRE 202 Query: 840 SIKTLEKGLETILSQKKKAEDGINKMGKDLFALSREMQAVEENCKNLQKEKDKSNVNHQK 899 +++LEK ++ +Q+++ + IN Q+ Sbjct: 203 QVQSLEKRFASLEAQRQQLQAEIN----------------------------------QR 228 Query: 900 ETK--SLKEDIAAKITEIKAINENLEEMKIQCNNLSKEKEHISKELVEYK 947 +TK L + IAAK +I+A E L+ ++ + + L +E E + + +Y+ Sbjct: 229 DTKIDQLDQAIAAKDNDIQAREEKLQGLETELSFLQREVEELERYYQDYQ 278 Score = 46.2 bits (108), Expect = 9e-07 Identities = 43/224 (19%), Positives = 102/224 (45%), Gaps = 36/224 (16%) Query: 1055 QISLLKEKLETATTANDENVNKISELTKTREELEAELAAYKNLKNELETKLETSEKALXX 1114 Q+ + K +LE A+ A +E SELT REE + + L L+ + Sbjct: 84 QLRVAKTELEQASQAKEEIE---SELTAVREEQQLVQERSRELNRNYTKALQLLRR---- 136 Query: 1115 XXXXXXXXXXXXIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIANKERQ 1174 + +++ +Q++ +L A L ++ + L A+ + + Q+ ++ Sbjct: 137 --------------VSEQSRNLRQEVANLSAERAQLNEQKDSLLAESSELQSQVKLRD-- 180 Query: 1175 YNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDALNLQIKE 1234 +E+S+ + I Q+ + + ++ ++++ K S ++ L ++EI+ + +I + Sbjct: 181 --QELSKRQERIA---QQEKVLARQREQVQSLEKRFASLEAQRQQL-QAEINQRDTKIDQ 234 Query: 1235 LKKKNETNEASLLESIKSVESETVKIKELQDECNFKEKEVSELE 1278 L + ++ +++ K++ L+ E +F ++EV ELE Sbjct: 235 L-------DQAIAAKDNDIQAREEKLQGLETELSFLQREVEELE 271 >MJAN-DSM-01-001277 MJ1254 hypothetical protein Length = 469 Score = 48.5 bits (114), Expect = 2e-07 Identities = 44/196 (22%), Positives = 93/196 (47%), Gaps = 31/196 (15%) Query: 1538 SKKSAEEDIKNLQHEKSDLISRINESEKDIEELKSKLRIEAKSGSELETVKQELNNAQEK 1597 SK+ E KN+++E + L +++ E E++I+ L K++ ++ +L+ A + Sbjct: 274 SKRKIIERTKNIKNELTSLKNKLKEKEEEIKNLAIKIK----------DLEDKLSKANKN 323 Query: 1598 IRINAEENTVLKSKLEDIERELKDKQAEIKSNQEEKELLTSRLKELEQELDSTQQK---- 1653 + E +VL ++ + E +++ E +E+ E L ++ L++E D + K Sbjct: 324 LLNKDEIISVLNERISEYESQIQKLLDENIIYKEKIESLNKYIETLKKENDKLKDKVREL 383 Query: 1654 ---AQKSEEERRAEVRKFQVEKSQLDEKAML-LETKYNDLVNKEQAWKRDEDTVKKTTDS 1709 A+K EE+R + F E DEK ++ L K+ + KE + + T Sbjct: 384 SDIAKKYMEEKRGVLWSFLTE----DEKIIIDLIKKHGHITQKE---------IVEITGM 430 Query: 1710 QRQEIEKLAKELDNLK 1725 + ++ ++ EL++ K Sbjct: 431 SKPKVSRIISELEDRK 446 Score = 43.5 bits (101), Expect = 6e-06 Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 17/119 (14%) Query: 1633 KELLTSRLKELEQELDSTQQKAQKSEEERRAEVRKFQVEKSQLDEKAMLLETKYNDLVNK 1692 K + R K ++ EL S + K ++ EEE ++ ++ L++K L +L+NK Sbjct: 275 KRKIIERTKNIKNELTSLKNKLKEKEEE----IKNLAIKIKDLEDK---LSKANKNLLNK 327 Query: 1693 EQAWK-------RDEDTVKKTTDSQ---RQEIEKLAKELDNLKAENSKLKEANEDRSEI 1741 ++ E ++K D +++IE L K ++ LK EN KLK+ + S+I Sbjct: 328 DEIISVLNERISEYESQIQKLLDENIIYKEKIESLNKYIETLKKENDKLKDKVRELSDI 386 >SCER-S28-01-001667 ORFP:YER008C SEC3, Chr V from 167807-171817, reverse complement Length = 1336 Score = 47.4 bits (111), Expect = 4e-07 Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 32/247 (12%) Query: 1515 ESNETELKSSMETIRKSDEKLEQSKKSAEEDIKNLQHEKSDLISRINESEKDIEELKSKL 1574 + E EL+ E R +K E K EE+ + Q E+ + ++ + + EE K ++ Sbjct: 336 QQEEAELRRLEEQKRLQLQK-ENEMKRLEEERRIKQEERKRQMELEHQRQLEEEERKRQM 394 Query: 1575 RIEAKSGSELETVKQELNNAQEKIRINAEENTVLKSKLEDIERELKDKQAEIKSNQEEKE 1634 +EAK EL+ +Q EE LK EREL EI+ Q E+E Sbjct: 395 ELEAKKQMELKRQRQ------------FEEEQRLKK-----EREL----LEIQRKQREQE 433 Query: 1635 LLTSRLKELEQELDSTQQKAQKSEEERRAEVRKFQVEKSQLDEKAMLLETKYNDLVNKEQ 1694 RLK+ EQE + +++ +KS+ + Q ++D LLE L + + Sbjct: 434 -TAERLKKEEQEALAKKEEEEKSKRNKVDNESYTQEINGKVDN---LLEDLNAVLAEETE 489 Query: 1695 AWKRDEDTVKKTTDSQRQEIEKLAKELDNLKAENSKLKEANEDRSEIDDLMLLVT----- 1749 ++ S + ++L K L+ K E+ + N+ S D++ L T Sbjct: 490 TTPTMQNGTYVPERSTARAHDQLKKPLNIAKVESLGGSDLNDSISLSDEIAGLNTSNLSG 549 Query: 1750 -DLDEKN 1755 D DEKN Sbjct: 550 EDQDEKN 556 >SYNE-PCC-01-001071 sll1583 Length = 562 Score = 46.6 bits (109), Expect = 7e-07 Identities = 81/428 (18%), Positives = 175/428 (40%), Gaps = 72/428 (16%) Query: 914 EIKAINENLEEMKIQCNNLSKEKEHISKELVEYKSRFQSHDNLVAKLTEKLKSLANNYKD 973 +++ + ++L+ ++ N E+ +++ +Q+ + +VA L +L +Y D Sbjct: 76 KLRRLEKDLQSVQASLENALAERNQLTEN-------YQAQEKMVAALQHQLA----HYDD 124 Query: 974 MQAEN-ESLIKAVEESKNESSIQLSNLQNKIDSMSQEKENFQIERGSIEKNIEQLKKTIS 1032 +Q+E L K +E E++ L+ ++ +++ + ++ S+ +QL +S Sbjct: 125 IQSEKFVGLQKLNQELLQENTNLSDRLKQAVNEVAETRPKL-VQLNSLVTRNQQLSDQLS 183 Query: 1033 DLEQTXXXXXXXXXXXXXXXXXQISLLKEKLETATTANDENVNKISELTKTREELEAELA 1092 +EQ Q ++ + + E ++ +LT R++++ EL Sbjct: 184 YVEQNQAKAIEQRLASQEKLWQQRHEQEQAQWNSQASQWE--EQVRQLTAERDQVQQELQ 241 Query: 1093 AYKNLKNELETKLETSEKALXXXXXXXXXXXXXXIQLEKEATETKQQLNSLRANLESLEK 1152 + +T+ E + AL +L ++ + + + + L A L LE+ Sbjct: 242 TARQQSQSAQTQAENLQAALD--------------RLGQQEEQWQGERSQLTAKLNQLEE 287 Query: 1153 EHEDLA---AQLK-KYEEQIANKERQYNEE------ISQLNDEITSTQQE----NESIKK 1198 ++LA A+LK K E A +R E+ + ++T QQE E++ K Sbjct: 288 AQKELALANAELKVKLETTQAEGDRLKTEKKEQAAALQSAQGQVTQLQQELAALQENLAK 347 Query: 1199 KNDELEGEV----KAMKSTSEEQSNLKKSEIDALNLQIKELKKKNETNEASLLESIKSVE 1254 E EV KA+ +T+ Q S + +++K+ ES KSV+ Sbjct: 348 AKGEPPSEVPEKTKAV-ATAPAQEAPVVSPSPPVTVEVKQ-------------ESPKSVQ 393 Query: 1255 SETVK-----------IKELQDECNFKEKEVSELEDKLKASEDKNSKYLELQKESEKIKE 1303 +E V+ + + + +K ++ D++ E+K K +E + + K Sbjct: 394 AEKVEPEPEPTPVPPAAQATKAPASPAKKSTAKAVDEVLDQEEKQVKAVEKTEPPRENKT 453 Query: 1304 ELDAKTTE 1311 T+E Sbjct: 454 VAPVATSE 461 Score = 45.4 bits (106), Expect = 2e-06 Identities = 52/261 (19%), Positives = 112/261 (42%), Gaps = 37/261 (14%) Query: 1514 IESNETELKSSMETIRKSDEKLEQSKKSAEEDIKNLQHEKSDLISRINESEKDIEELKSK 1573 +E + +++S+E +L ++ ++ E+ + LQH +L Sbjct: 80 LEKDLQSVQASLENALAERNQLTENYQAQEKMVAALQH-----------------QLAHY 122 Query: 1574 LRIEAKSGSELETVKQELNNAQEKIRINAEENTVLKSKLEDIERELKDKQAEIKSNQEEK 1633 I+++ L+ + QEL +ENT L +L+ E+ AE + + Sbjct: 123 DDIQSEKFVGLQKLNQEL----------LQENTNLSDRLKQAVNEV----AETRPKLVQL 168 Query: 1634 ELLTSRLKELEQELDSTQQKAQKSEEERRAEVRKF-----QVEKSQLDEKAMLLETKYND 1688 L +R ++L +L +Q K+ E+R A K + E++Q + +A E + Sbjct: 169 NSLVTRNQQLSDQLSYVEQNQAKAIEQRLASQEKLWQQRHEQEQAQWNSQASQWEEQVRQ 228 Query: 1689 LVNKEQAWKRDEDTVKKTTDSQRQEIEKLAKELDNLKAENSKLK-EANEDRSEIDDLMLL 1747 L + +++ T ++ + S + + E L LD L + + + E ++ ++++ L Sbjct: 229 LTAERDQVQQELQTARQQSQSAQTQAENLQAALDRLGQQEEQWQGERSQLTAKLNQLEEA 288 Query: 1748 VTDLDEKNAKYRSKLKDLGVE 1768 +L NA+ + KL+ E Sbjct: 289 QKELALANAELKVKLETTQAE 309 >MGEN-G37-01-000317 MG312 cytadherence accessory protein (hmw1) Length = 1139 Score = 44.7 bits (104), Expect = 3e-06 Identities = 107/569 (18%), Positives = 219/569 (38%), Gaps = 66/569 (11%) Query: 750 QTETESTHENLTEKLIALTNEHKELDEKYQILNSSHSSLK---ENFSILETELKNVRDSL 806 Q E+ + + L T + LD+ Q H LK E + + V+ +L Sbjct: 544 QPESTTDSYSFDSDLPQPTLDQPSLDDHVQYNFDHHEELKPVAEEQNNYQVGFDQVQANL 603 Query: 807 DEMTQLRDVLE---TKDKENQTALL--EYKSTIHKQEDSIKTLEKGLETILSQKKKAEDG 861 D +++ E T D E++ A + Y+ I + T ET + D Sbjct: 604 DNNEEIQPTAEKEVTTDFESKQAQVVDSYQLPIDTDQQDQTTFSSSFET--QPTVEQFDQ 661 Query: 862 INKMGKDLFALSREMQAVEENCKNLQKEKDKSNVNHQKETKSLKEDIAAKITEIKA---- 917 +N D F + V E+ N Q + SN + + ++ D IT K+ Sbjct: 662 VNSEVNDQFKPEITKEPVLESSFNKQDVVETSNYTNNLQKFDIQSDNKITITTKKSSPQI 721 Query: 918 --------INENLEEMKIQCNNLSKEKEHISKELVEYKSRFQSHDNLVAKLTEKLKSL-- 967 ++ +E ++ L+ + + +E + S + L L+ +L+ + Sbjct: 722 PTTLPISFVSNRIEYKPVE--TLALDNKESQQEQITINSITEDSKTLAKTLSVQLQQINS 779 Query: 968 ANNYKDMQAENESLIKAVEESKNESSIQLSNLQNKIDSMSQEKENFQIERGSIEKNIEQL 1027 NN + +E+ L K ++ +++ + Q KI+ + KE + E +I Q Sbjct: 780 LNNQSIVTSESVRLDKK-DDQLTINTVNSEDQQPKIEVFVKAKEPVE------EHSITQN 832 Query: 1028 KKTISDLEQTXXXXXXXXXXXXXXXXXQISLLKEKLETATTANDENVNKISELTKTREEL 1087 K+++ D + IS LK E T N + + ++++ + ++ Sbjct: 833 KQSVEDKSELDNFNKKSDLYKI------ISELKRG-ELNPTINFDAIFQMNDYQMSVKQS 885 Query: 1088 EAELAAY-KNLKNELETKLETSEKALXXXXXXXXXXXXXXIQLEKEATETKQQLNSLRAN 1146 L + N KN++ + +K L +L + Q N+ + N Sbjct: 886 FIHLNDFVTNYKNQISERYLIIKKELQSELS----------RLIDQNENLNVQFNNAK-N 934 Query: 1147 LESLEKEH--EDLAAQLKKYEEQIANKERQYNEEISQLNDEITSTQQENESIKKKNDELE 1204 L +L+KE LA+ IA K E++ + + + Q+ +KK + ++ Sbjct: 935 LTTLQKEEMIRSLASDFA-----IAYKPSNSYEQLQKSGEIMRHVQRAITENEKKIESIQ 989 Query: 1205 GEVKAMKSTSEEQSNLKKSEIDALNLQIKELKKKNETNEASLLESIKSVESETVKIKELQ 1264 G +K +K+ + I+ L+ ++ KK+ + S +S+ ++ V+ +L Sbjct: 990 GSLKQLKTVYNSCCETIMNNINKLDNTLRFAKKEKDPLLLSNFDSV--TDNGLVEPNQLM 1047 Query: 1265 DEC-----NFKEKEVSELEDKLKASEDKN 1288 D+ F +L+D + + D+N Sbjct: 1048 DDLIDFSNTFDNISNEQLDDFIYENMDRN 1076 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.308 0.127 0.326 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 172,584 Number of Sequences: 78 Number of extensions: 9622 Number of successful extensions: 809 Number of sequences better than 1.0e-05: 12 Number of HSP's better than 0.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 99 Number of HSP's gapped (non-prelim): 122 length of query: 1790 length of database: 48,235 effective HSP length: 76 effective length of query: 1714 effective length of database: 42,307 effective search space: 72514198 effective search space used: 72514198 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits) S2: 99 (42.7 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SCER-S28-01-000850 ORFP:YDL101C DUN1, Chr IV from 280306-281847, reverse complement (513 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SCER-S28-01-000850 ORFP:YDL101C DUN1, Chr IV from 280306-281847... 977 0.0 SYNE-PCC-01-001777 slr0599 52 3e-09 SCER-S28-01-000320 ORFP:YBR059C AKL1, Chr II from 356820-360146... 50 2e-08 >SCER-S28-01-000850 ORFP:YDL101C DUN1, Chr IV from 280306-281847, reverse complement Length = 513 Score = 977 bits (2526), Expect = 0.0 Identities = 489/513 (95%), Positives = 489/513 (95%) Query: 1 MSLSTKREHSGDVTDSSFKRQQRSNKPSSEYTCLGHLVNLIPGKEQKVEITNRNVTTIGR 60 MSLSTKREHSGDVTDSSFKRQQRSNKPSSEYTCLGHLVNLIPGKEQKVEITNRNVTTIGR Sbjct: 1 MSLSTKREHSGDVTDSSFKRQQRSNKPSSEYTCLGHLVNLIPGKEQKVEITNRNVTTIGR 60 Query: 61 SRSCDVILSEPDISTFHAEFHLLQMDVDNFQRNLINVIDKSRNGTFINGNRLVKKDYILK 120 SRSCDVILSEPDISTFHAEFHLLQMDVDNFQRNLINVIDKSRNGTFINGNRLVKKDYILK Sbjct: 61 SRSCDVILSEPDISTFHAEFHLLQMDVDNFQRNLINVIDKSRNGTFINGNRLVKKDYILK 120 Query: 121 NGDRIVFGKSCSFLFKYASSSSTDIENDDEKVSSESRSYKNDDEVFKKPQIXXXXXXXXX 180 NGDRIVFGKSCSFLFKYASSSSTDIENDDEKVSSESRSYKNDDEVFKKPQI Sbjct: 121 NGDRIVFGKSCSFLFKYASSSSTDIENDDEKVSSESRSYKNDDEVFKKPQISATSSQNAT 180 Query: 181 XXXXIRKLNKTRPVSFFDKYLLGKELGAGHYALVKEAKNKKTGQQVAVKIFHAXXXXXXX 240 IRKLNKTRPVSFFDKYLLGKELGAGHYALVKEAKNKKTGQQVAVKIFHA Sbjct: 181 TSAAIRKLNKTRPVSFFDKYLLGKELGAGHYALVKEAKNKKTGQQVAVKIFHAQQNDDQK 240 Query: 241 XXXXFREETNILMRVQHPNIVNLLDSFVEPISKSQIQKYLVLEKIDDGELFERIVRKTCL 300 FREETNILMRVQHPNIVNLLDSFVEPISKSQIQKYLVLEKIDDGELFERIVRKTCL Sbjct: 241 KNKQFREETNILMRVQHPNIVNLLDSFVEPISKSQIQKYLVLEKIDDGELFERIVRKTCL 300 Query: 301 RQDESKALFKQLLTGLKYLHEQNIIHRDIKPENILLNITRRENPSQVQLGPWDEDEIDIQ 360 RQDESKALFKQLLTGLKYLHEQNIIHRDIKPENILLNITRRENPSQVQLGPWDEDEIDIQ Sbjct: 301 RQDESKALFKQLLTGLKYLHEQNIIHRDIKPENILLNITRRENPSQVQLGPWDEDEIDIQ 360 Query: 361 VKIADFGLAKFTGEMQFTNTLCGTPSYVAPEVLTKKGYTSKVDLWSAGVILYVCLCGFPP 420 VKIADFGLAKFTGEMQFTNTLCGTPSYVAPEVLTKKGYTSKVDLWSAGVILYVCLCGFPP Sbjct: 361 VKIADFGLAKFTGEMQFTNTLCGTPSYVAPEVLTKKGYTSKVDLWSAGVILYVCLCGFPP 420 Query: 421 FSDQLGPPSLKEQILQAKYAFYSPYWDKIDDSVLHLISNLLVLNPDERYNIDEALNHPWF 480 FSDQLGPPSLKEQILQAKYAFYSPYWDKIDDSVLHLISNLLVLNPDERYNIDEALNHPWF Sbjct: 421 FSDQLGPPSLKEQILQAKYAFYSPYWDKIDDSVLHLISNLLVLNPDERYNIDEALNHPWF 480 Query: 481 NDIQQQSSVSLELQRLQITDNKIPKTYSELSCL 513 NDIQQQSSVSLELQRLQITDNKIPKTYSELSCL Sbjct: 481 NDIQQQSSVSLELQRLQITDNKIPKTYSELSCL 513 >SYNE-PCC-01-001777 slr0599 Length = 535 Score = 52.4 bits (124), Expect = 3e-09 Identities = 62/227 (27%), Positives = 93/227 (40%), Gaps = 41/227 (18%) Query: 257 HPNIVNLLDSFVEPISKSQIQKYLVLEKIDDGELFERIVRKTCLRQDESKALFKQLLTGL 316 HP I L F E YLV E I L + +K + L +L L Sbjct: 76 HPQIPQLYAYFSEGEDF-----YLVQEWIPGLTLTQAHAQKGNFSSTAVEELLLGILPVL 130 Query: 317 KYLHEQNIIHRDIKPENILLNITRRENPSQVQLGPWDEDEIDIQVKIADFGLAKFT---- 372 +++H++ IIHRDIKP+NI+L E D + + DFG+ K T Sbjct: 131 EFIHQRRIIHRDIKPDNIILR------------------EADGKPILIDFGIIKETMGTL 172 Query: 373 ----GEMQFTNTLCGTPSYVAPEVLTKKGYTSKVDLWSAGVILYVCLCGFPPFSDQLGPP 428 G ++ L GTP Y+A E + S DL+S G+ L G P L Sbjct: 173 VNPDGRSAYSVAL-GTPGYMASEQAAGRPVFSS-DLYSLGLTAIFLLTGKTP--QYLTSD 228 Query: 429 SLKEQILQAKYAFYSPYWDKIDDSVLHLISNLLVLNPDERYNIDEAL 475 S +IL + A ++ ++ +I + +P ER+N A+ Sbjct: 229 SRTGEILWRQGA------PQVSPTLAKVIDQAVRYHPRERFNSATAM 269 >SCER-S28-01-000320 ORFP:YBR059C AKL1, Chr II from 356820-360146, reverse complement Length = 1108 Score = 49.7 bits (117), Expect = 2e-08 Identities = 61/243 (25%), Positives = 109/243 (44%), Gaps = 29/243 (11%) Query: 246 REETNILMRVQH-PNIVNLLDSFVEPISKSQIQKY---LVLEKIDDGELFERIVRK--TC 299 R E ++ +++ PNIV DS + +Q + L++E + L + + ++ T Sbjct: 92 RNEVEVMKKLKGAPNIVQYFDSNASR-RRDGVQGFEVLLLMELCPNKSLLDYMNQRLSTK 150 Query: 300 LRQDESKALFKQLLTGLKYLH--EQNIIHRDIKPENILLNITRRENPSQVQLGPWDEDEI 357 L + E + + + +H ++IHRDIK EN+L+ + + +L + Sbjct: 151 LTEAEIVKIMYDVALSISQMHYLPVSLIHRDIKIENVLV-----DAKNNFKLADFGSTST 205 Query: 358 DIQVKIADFGLAKFTGEMQFTNTLCGTPSYVAPEVLTK---KGYTSKVDLWSAGVILYVC 414 + +A T + + +T TP Y +PE++ K D+W+ GV LY Sbjct: 206 CFPIVTTHQDIALLTQNI-YVHT---TPQYRSPEMIDLYRCLPINEKSDIWALGVFLYKL 261 Query: 415 LCGFPPFSDQLGPPSLKEQILQAKYAFYSPYWDKIDDSVLHLISNLLVLNPDERYNIDEA 474 L PF + G + IL +KY F +K +++LI +L NP+ R NI + Sbjct: 262 LFFTTPF-EMTG----QFAILHSKYEFPV---NKYSSKLINLIIIMLAENPNLRPNIYQV 313 Query: 475 LNH 477 L H Sbjct: 314 LYH 316 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.318 0.136 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,870 Number of Sequences: 78 Number of extensions: 2050 Number of successful extensions: 13 Number of sequences better than 1.0e-05: 3 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 11 Number of HSP's gapped (non-prelim): 3 length of query: 513 length of database: 48,235 effective HSP length: 67 effective length of query: 446 effective length of database: 43,009 effective search space: 19182014 effective search space used: 19182014 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 94 (40.8 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SCER-S28-01-001230 ORFP:YDR213W UPC2, Chr IV from 889743-892484 (913 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SCER-S28-01-001230 ORFP:YDR213W UPC2, Chr IV from 889743-892484 1067 0.0 >SCER-S28-01-001230 ORFP:YDR213W UPC2, Chr IV from 889743-892484 Length = 913 Score = 1067 bits (2760), Expect = 0.0 Identities = 545/560 (97%), Positives = 545/560 (97%) Query: 354 PNDEEGGVQEENSKKVKEGPLQSQTSETTLNSDAATLQADAXXXXXXXXXXXXXXXTFPT 413 PNDEEGGVQEENSKKVKEGPLQSQTSETTLNSDAATLQADA TFPT Sbjct: 354 PNDEEGGVQEENSKKVKEGPLQSQTSETTLNSDAATLQADALSQLSKMGLSLKSLSTFPT 413 Query: 414 AGIGGVSYDFQELLGIKFPINNGNSRATKASNAEEALANMQEHHERAAASVKENDGQLSD 473 AGIGGVSYDFQELLGIKFPINNGNSRATKASNAEEALANMQEHHERAAASVKENDGQLSD Sbjct: 414 AGIGGVSYDFQELLGIKFPINNGNSRATKASNAEEALANMQEHHERAAASVKENDGQLSD 473 Query: 474 TKSPAPSNNAQGGSASIMEPQAADAVSTMAPISMIERNMNRNSNISPSTPSAVLNDRQEM 533 TKSPAPSNNAQGGSASIMEPQAADAVSTMAPISMIERNMNRNSNISPSTPSAVLNDRQEM Sbjct: 474 TKSPAPSNNAQGGSASIMEPQAADAVSTMAPISMIERNMNRNSNISPSTPSAVLNDRQEM 533 Query: 534 QDSISSLGNLTKAALENNEPTISLQTSQTENEDDASRQDMTSKINNEADRSSVSAGTSNI 593 QDSISSLGNLTKAALENNEPTISLQTSQTENEDDASRQDMTSKINNEADRSSVSAGTSNI Sbjct: 534 QDSISSLGNLTKAALENNEPTISLQTSQTENEDDASRQDMTSKINNEADRSSVSAGTSNI 593 Query: 594 AKLLDLSTKGNLNLIDMKLFHHYCTKVWPTITAAKVSGPEIWRDYIPELAFDYPFLMHAL 653 AKLLDLSTKGNLNLIDMKLFHHYCTKVWPTITAAKVSGPEIWRDYIPELAFDYPFLMHAL Sbjct: 594 AKLLDLSTKGNLNLIDMKLFHHYCTKVWPTITAAKVSGPEIWRDYIPELAFDYPFLMHAL 653 Query: 654 LAFSATHLSRTETGLEQYVSSHRLDALRLLREAVLEISENNTDALVASALILIMDSLANA 713 LAFSATHLSRTETGLEQYVSSHRLDALRLLREAVLEISENNTDALVASALILIMDSLANA Sbjct: 654 LAFSATHLSRTETGLEQYVSSHRLDALRLLREAVLEISENNTDALVASALILIMDSLANA 713 Query: 714 SGNGTVGNQSLNSMSPSAWIFHVKGAATILTAVWPLSERSKFHNIISVDLSDLGDVINPD 773 SGNGTVGNQSLNSMSPSAWIFHVKGAATILTAVWPLSERSKFHNIISVDLSDLGDVINPD Sbjct: 714 SGNGTVGNQSLNSMSPSAWIFHVKGAATILTAVWPLSERSKFHNIISVDLSDLGDVINPD 773 Query: 774 VGTITELVCFDESIADLYPVGLDSPYLITLAYLDKLHREKNQGDFILRVFTFPALLDKTF 833 VGTITELVCFDESIADLYPVGLDSPYLITLAYLDKLHREKNQGDFILRVFTFPALLDKTF Sbjct: 774 VGTITELVCFDESIADLYPVGLDSPYLITLAYLDKLHREKNQGDFILRVFTFPALLDKTF 833 Query: 834 LALLMTGDLGAMRIMRSYYKLLRGFATEVKDKVWFLEGVTQVLPQDVDEYSGGGGMHMML 893 LALLMTGDLGAMRIMRSYYKLLRGFATEVKDKVWFLEGVTQVLPQDVDEYSGGGGMHMML Sbjct: 834 LALLMTGDLGAMRIMRSYYKLLRGFATEVKDKVWFLEGVTQVLPQDVDEYSGGGGMHMML 893 Query: 894 DFLGGGLPSMTTTNFSDFSL 913 DFLGGGLPSMTTTNFSDFSL Sbjct: 894 DFLGGGLPSMTTTNFSDFSL 913 Score = 478 bits (1231), Expect = e-137 Identities = 239/288 (82%), Positives = 239/288 (82%) Query: 1 MSEVGIQNHKKAVTKPRRREKVIELIEVDGKKVSTTSTGKRKFHNKSKNGCDNCKRRRVK 60 MSEVGIQNHKKAVTKPRRREKVIELIEVDGKKVSTTSTGKRKFHNKSKNGCDNCKRRRVK Sbjct: 1 MSEVGIQNHKKAVTKPRRREKVIELIEVDGKKVSTTSTGKRKFHNKSKNGCDNCKRRRVK 60 Query: 61 CDEGKPACRKCTNMKLECQYTPIHLRKGRGATVVKYVTRKADGSVESDSSVDLPPTIKKE 120 CDEGKPACRKCTNMKLECQYTPIHLRKGRGATVVKYVTRKADGSVESDSSVDLPPTIKKE Sbjct: 61 CDEGKPACRKCTNMKLECQYTPIHLRKGRGATVVKYVTRKADGSVESDSSVDLPPTIKKE 120 Query: 121 QTPFNDIQSAVKASGSSNDSFPXXXXXXXXXXXXXXXXPIEDKNNMTPLSMGLQGTINKK 180 QTPFNDIQSAVKASGSSNDSFP PIEDKNNMTPLSMGLQGTINKK Sbjct: 121 QTPFNDIQSAVKASGSSNDSFPSSASTTKSESEEKSSAPIEDKNNMTPLSMGLQGTINKK 180 Query: 181 DMMNNFFSQNGTIGFGSPERLNSGIDGLLLPPLPSGNMGAFXXXXXXXXXXXXXXXXXXX 240 DMMNNFFSQNGTIGFGSPERLNSGIDGLLLPPLPSGNMGAF Sbjct: 181 DMMNNFFSQNGTIGFGSPERLNSGIDGLLLPPLPSGNMGAFQLQQQQQVQQQSQPQTQAQ 240 Query: 241 XASGTPNERYGSFDLAGSPALQSTXXXXXXXXXXXXXCNRIPSGQNYT 288 ASGTPNERYGSFDLAGSPALQST CNRIPSGQNYT Sbjct: 241 QASGTPNERYGSFDLAGSPALQSTGMSLSNSLSGMLLCNRIPSGQNYT 288 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.313 0.130 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,010 Number of Sequences: 78 Number of extensions: 3122 Number of successful extensions: 19 Number of sequences better than 1.0e-05: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 16 Number of HSP's gapped (non-prelim): 2 length of query: 913 length of database: 48,235 effective HSP length: 71 effective length of query: 842 effective length of database: 42,697 effective search space: 35950874 effective search space used: 35950874 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 97 (42.0 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SCER-S28-01-001306 ORFP:YDR285W ZIP1, Chr IV from 1032427-1035054 (875 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SCER-S28-01-001306 ORFP:YDR285W ZIP1, Chr IV from 1032427-1035054 1602 0.0 SCER-S28-01-000806 ORFP:YDL058W USO1, Chr IV from 345664-351036 122 5e-30 MGEN-G37-01-000335 MG328 conserved hypothetical protein 87 2e-19 MGEN-G37-01-000221 MG218 cytadherence accessory protein (hmw2) 86 5e-19 SCER-S28-01-002651 ORFP:YHR023W MYO1, Chr VIII from 151657-157443 79 4e-17 MPNE-M12-01-000474 gi|13508213|ref|NP_110162.1| coiled coil pro... 75 6e-16 SYNE-PCC-01-001071 sll1583 53 5e-09 SYNE-PCC-01-000943 sll1424 51 2e-08 MGEN-G37-01-000317 MG312 cytadherence accessory protein (hmw1) 48 1e-07 SYNE-PCC-01-000727 sll1120 46 4e-07 MJAN-DSM-01-001277 MJ1254 hypothetical protein 45 7e-07 >SCER-S28-01-001306 ORFP:YDR285W ZIP1, Chr IV from 1032427-1035054 Length = 875 Score = 1602 bits (4148), Expect = 0.0 Identities = 832/875 (95%), Positives = 832/875 (95%) Query: 1 MSNFFRDSSMGFKPRPNIFAKLRVRDVDSDSSANTVVENSSNCLDVGSSIEGDDTFKKPH 60 MSNFFRDSSMGFKPRPNIFAKLRVRDVDSDSSANTVVENSSNCLDVGSSIEGDDTFKKPH Sbjct: 1 MSNFFRDSSMGFKPRPNIFAKLRVRDVDSDSSANTVVENSSNCLDVGSSIEGDDTFKKPH 60 Query: 61 KTSTEQELITSMSLSQRNHGYSDDMEIGSPKKTTSTDQYNRILKNDVAAIENDTDEDFEI 120 KTSTEQELITSMSLSQRNHGYSDDMEIGSPKKTTSTDQYNRILKNDVAAIENDTDEDFEI Sbjct: 61 KTSTEQELITSMSLSQRNHGYSDDMEIGSPKKTTSTDQYNRILKNDVAAIENDTDEDFEI 120 Query: 121 TEVREVSEGVAKETKESHGDPNDSETTLKDSKMHEYTMTNGKAPLHXXXXXXXXXXXDVL 180 TEVREVSEGVAKETKESHGDPNDSETTLKDSKMHEYTMTNGKAPLH DVL Sbjct: 121 TEVREVSEGVAKETKESHGDPNDSETTLKDSKMHEYTMTNGKAPLHTSINNSSTSSNDVL 180 Query: 181 LEAFTNTQRICSNLKQELQKQQQDNAKLKVRLQSYASNSDKINEKVGKYKSCLETLQERI 240 LEAFTNTQRICSNLKQELQKQQQDNAKLKVRLQSYASNSDKINEKVGKYKSCLETLQERI Sbjct: 181 LEAFTNTQRICSNLKQELQKQQQDNAKLKVRLQSYASNSDKINEKVGKYKSCLETLQERI 240 Query: 241 ATLTSHKNNQETKLKDLRQNHQLYQRRISGFKTSIENLNKTINDLGKNKKEADAELMKKG 300 ATLTSHKNNQETKLKDLRQNHQLYQRRISGFKTSIENLNKTINDLGKNKKEADAELMKKG Sbjct: 241 ATLTSHKNNQETKLKDLRQNHQLYQRRISGFKTSIENLNKTINDLGKNKKEADAELMKKG 300 Query: 301 KEIEYLKRELDDCSGQLSEEKIKNSSLIQEMGKNREEMIKSIENFFSEDKAHHLLQFNKF 360 KEIEYLKRELDDCSGQLSEEKIKNSSLIQEMGKNREEMIKSIENFFSEDKAHHLLQFNKF Sbjct: 301 KEIEYLKRELDDCSGQLSEEKIKNSSLIQEMGKNREEMIKSIENFFSEDKAHHLLQFNKF 360 Query: 361 EERVHDLFEKKLQKHFDVAKDTLNVGLRNTTVELSSNTETMLKQQYEDIKENLEQKMSSS 420 EERVHDLFEKKLQKHFDVAKDTLNVGLRNTTVELSSNTETMLKQQYEDIKENLEQKMSSS Sbjct: 361 EERVHDLFEKKLQKHFDVAKDTLNVGLRNTTVELSSNTETMLKQQYEDIKENLEQKMSSS 420 Query: 421 KDEMAKTINELSVTQKGLIMGVQEELLTSSGNIQTALVSEMNNTRQELLDDASQTAKNYA 480 KDEMAKTINELSVTQKGLIMGVQEELLTSSGNIQTALVSEMNNTRQELLDDASQTAKNYA Sbjct: 421 KDEMAKTINELSVTQKGLIMGVQEELLTSSGNIQTALVSEMNNTRQELLDDASQTAKNYA 480 Query: 481 SLENLVKAYKAEIVQSNEYEERIKHLESERSTLSSQKNQIISSLGTKEAQYEDLVKKLEA 540 SLENLVKAYKAEIVQSNEYEERIKHLESERSTLSSQKNQIISSLGTKEAQYEDLVKKLEA Sbjct: 481 SLENLVKAYKAEIVQSNEYEERIKHLESERSTLSSQKNQIISSLGTKEAQYEDLVKKLEA 540 Query: 541 KNIEISQISGKEQSLTEKNENLSNELKKVQDQLEKLNNLNITTKSNYENKISSQNEIVKA 600 KNIEISQISGKEQSLTEKNENLSNELKKVQDQLEKLNNLNITTKSNYENKISSQNEIVKA Sbjct: 541 KNIEISQISGKEQSLTEKNENLSNELKKVQDQLEKLNNLNITTKSNYENKISSQNEIVKA 600 Query: 601 LVSENDTLKQRIQQLVEIKENEQKDHTTKLEAFQKNNEQLQKLNVEVVQLKAHELELEEQ 660 LVSENDTLKQRIQQLVEIKENEQKDHTTKLEAFQKNNEQLQKLNVEVVQLKAHELELEEQ Sbjct: 601 LVSENDTLKQRIQQLVEIKENEQKDHTTKLEAFQKNNEQLQKLNVEVVQLKAHELELEEQ 660 Query: 661 NRHLKNCLEKKETGVEESLSDVKTLKQQVIVLKSEKQDITAEKLELQDNLESLEEVTKNL 720 NRHLKNCLEKKETGVEESLSDVKTLKQQVIVLKSEKQDITAEKLELQDNLESLEEVTKNL Sbjct: 661 NRHLKNCLEKKETGVEESLSDVKTLKQQVIVLKSEKQDITAEKLELQDNLESLEEVTKNL 720 Query: 721 QQKVQSXXXXXXXXXXXXXXXXNHKRNEPSKKGTQNFTKPSDSPKKNATTSNLFPNNSAA 780 QQKVQS NHKRNEPSKKGTQNFTKPSDSPKKNATTSNLFPNNSAA Sbjct: 721 QQKVQSQKRELEQKIKELEEIKNHKRNEPSKKGTQNFTKPSDSPKKNATTSNLFPNNSAA 780 Query: 781 IHSPMKKCPKVDHISKSRINSSKETSKXXXXXXXXXXXXXXXXLTNPSPIQIKPVRGKIK 840 IHSPMKKCPKVDHISKSRINSSKETSK LTNPSPIQIKPVRGKIK Sbjct: 781 IHSPMKKCPKVDHISKSRINSSKETSKFNDEFDLSSSSNDDLELTNPSPIQIKPVRGKIK 840 Query: 841 KGSNCMKPPISSRKKLLLVEDEDQSLKISKKRRRK 875 KGSNCMKPPISSRKKLLLVEDEDQSLKISKKRRRK Sbjct: 841 KGSNCMKPPISSRKKLLLVEDEDQSLKISKKRRRK 875 >SCER-S28-01-000806 ORFP:YDL058W USO1, Chr IV from 345664-351036 Length = 1790 Score = 122 bits (306), Expect = 5e-30 Identities = 145/660 (21%), Positives = 288/660 (43%), Gaps = 73/660 (11%) Query: 103 LKNDVAAIENDTDEDFE-ITEVREVSEGVAKETKESHGDPNDSETTLKDS-KMHEYTMTN 160 LK ++ +++ +T+ E +TE KE E + N S ++LK++ + E + N Sbjct: 742 LKGEITSLQTETESTHENLTEKLIALTNEHKELDEKYQILNSSHSSLKENFSILETELKN 801 Query: 161 GKAPLHXXXXXXXXXXXDVLLEAFTNTQRICSNLKQELQKQQQDNAKLKVRLQSYASNSD 220 + L DVL Q K + KQ+ L+ L++ S Sbjct: 802 VRDSLDEMTQLR-----DVLETKDKENQTALLEYKSTIHKQEDSIKTLEKGLETILSQKK 856 Query: 221 KINEKVGKYKSCL-------ETLQERIATLTSHKN----NQETKLKDLRQNHQLYQRRIS 269 K + + K L + ++E L K+ N + + K L+++ I Sbjct: 857 KAEDGINKMGKDLFALSREMQAVEENCKNLQKEKDKSNVNHQKETKSLKEDIAAKITEIK 916 Query: 270 GFKTSIENLNKTINDLGKNKKEADAELMKKGKEIEYLKR--ELDDCSGQLSEEKIKNSSL 327 ++E + N+L K K+ EL +EY R D+ +L+E+ ++ Sbjct: 917 AINENLEEMKIQCNNLSKEKEHISKEL------VEYKSRFQSHDNLVAKLTEKLKSLANN 970 Query: 328 IQEMGKNREEMIKSIENFFSEDKAHHLLQFNKFEERVHDLFEKK---------LQKHFDV 378 ++M E +IK++E E K +Q + + ++ + ++K ++K+ + Sbjct: 971 YKDMQAENESLIKAVE----ESKNESSIQLSNLQNKIDSMSQEKENFQIERGSIEKNIEQ 1026 Query: 379 AKDTLNVGLRNTTVELSSNTETMLKQQYED----IKENLEQKMSSSKDEMAKTINELSVT 434 K T++ L T E+ S +++ K +YE +KE LE +++ DE I+EL+ T Sbjct: 1027 LKKTIS-DLEQTKEEIISKSDSS-KDEYESQISLLKEKLE-TATTANDENVNKISELTKT 1083 Query: 435 QKGLIMGVQEELLTSSGNIQTALVSEMNNTRQELLDDASQTAKNYASLENLVKAYKAEIV 494 ++ L E L + N++ L +++ + + L + L K Sbjct: 1084 REEL-----EAELAAYKNLKNELETKLETSEKALKEVKENEEHLKEEKIQLEKEATETKQ 1138 Query: 495 QSNEYEERIKHLESERSTLSSQKNQIISSLGTKEAQYEDLVKKLEAKNIEISQISGKEQS 554 Q N ++ LE E L++Q + + KE QY + + +L N EI+ + +S Sbjct: 1139 QLNSLRANLESLEKEHEDLAAQLKKYEEQIANKERQYNEEISQL---NDEITSTQQENES 1195 Query: 555 LTEKNENLSNELKKVQDQLEKLNNLNITTKSNYENKISSQNEIVKALVSENDTLKQRIQQ 614 + +KN+ L E+K ++ E+ +NL +++I + N +K L +N+T + + + Sbjct: 1196 IKKKNDELEGEVKAMKSTSEEQSNLK-------KSEIDALNLQIKELKKKNETNEASLLE 1248 Query: 615 LVEIKENEQKDHTTKLEAFQKN-NEQLQKLNVEVVQLKAHE------LELEEQNRHLKNC 667 ++ E+E T K++ Q N + ++++ +LKA E LEL++++ +K Sbjct: 1249 SIKSVESE----TVKIKELQDECNFKEKEVSELEDKLKASEDKNSKYLELQKESEKIKEE 1304 Query: 668 LEKKETGVEESLSDVKTLKQQVIVLKSEKQDITAEKLELQDNL-ESLEEVTKNLQQKVQS 726 L+ K T ++ L + L + +SE + E + N E LE++ +Q K Q+ Sbjct: 1305 LDAKTTELKIQLEKITNLSKAKEKSESELSRLKKTSSEERKNAEEQLEKLKNEIQIKNQA 1364 Score = 111 bits (278), Expect = 8e-27 Identities = 151/659 (22%), Positives = 281/659 (42%), Gaps = 82/659 (12%) Query: 191 CSNLKQELQKQQQDNAKLKVRLQSYASNSDKINEKV----GKYKSCLETLQERIATLTSH 246 C+NL +E + ++ + K R QS+ + K+ EK+ YK + I + Sbjct: 929 CNNLSKEKEHISKELVEYKSRFQSHDNLVAKLTEKLKSLANNYKDMQAENESLIKAVEES 988 Query: 247 KN-------NQETKLKDLRQNHQLYQRRISGFKTSIENLNKTINDLGKNKKE----ADAE 295 KN N + K+ + Q + +Q + +IE L KTI+DL + K+E +D+ Sbjct: 989 KNESSIQLSNLQNKIDSMSQEKENFQIERGSIEKNIEQLKKTISDLEQTKEEIISKSDSS 1048 Query: 296 LMKKGKEIEYLKRELDDCSGQLSEEKIKNSSLIQEMGKNREEM------IKSIENFFSED 349 + +I LK +L+ + E N + I E+ K REE+ K+++N Sbjct: 1049 KDEYESQISLLKEKLETATTANDE----NVNKISELTKTREELEAELAAYKNLKNELETK 1104 Query: 350 KAHHLLQFNKFEERVHDLFEKKLQ--KHFDVAKDTLNVGLRNTTVELSSNTETMLKQ--Q 405 + +E L E+K+Q K K LN LR L E + Q + Sbjct: 1105 LETSEKALKEVKENEEHLKEEKIQLEKEATETKQQLN-SLRANLESLEKEHEDLAAQLKK 1163 Query: 406 YEDIKENLE----QKMSSSKDEMAKTINEL-SVTQKGLIMGVQEELLTSSGNIQTALV-S 459 YE+ N E +++S DE+ T E S+ +K + + + + S+ Q+ L S Sbjct: 1164 YEEQIANKERQYNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNLKKS 1223 Query: 460 EMNNTRQELLDDASQTAKNYASLENLVKAYKAEIVQSNEYEERIKHLESERSTLSSQKNQ 519 E++ ++ + + N ASL +K+ ++E V+ E ++ E E S L Sbjct: 1224 EIDALNLQIKELKKKNETNEASLLESIKSVESETVKIKELQDECNFKEKEVSEL------ 1277 Query: 520 IISSLGTKEAQYEDLVKKLEAKNIEISQISGKEQSLTEKNENLSNELKKVQDQLEKLNNL 579 ED +K E KN + ++ + + + E+ + + ELK QLEK+ NL Sbjct: 1278 ------------EDKLKASEDKNSKYLELQKESEKIKEELDAKTTELKI---QLEKITNL 1322 Query: 580 NITTKSNYENKISSQNEIVKALVSENDTLKQRIQQLVEIKENEQKDHTTKLEAFQKNNEQ 639 + + K S++E+ + + ++ K +QL ++K Q K +AF+K + Sbjct: 1323 S-------KAKEKSESELSRLKKTSSEERKNAEEQLEKLKNEIQ----IKNQAFEKERKL 1371 Query: 640 LQKLNVEVVQLKAHELE-LEEQNRHLKNCLEKKETGVEE--------SLSDVKTLKQQVI 690 L + + + Q + ++ LE++ L+N E K ++ SLS+ + L+++ Sbjct: 1372 LNEGSSTITQEYSEKINTLEDELIRLQNENELKAKEIDNTRSELEKVSLSNDELLEEKQN 1431 Query: 691 VLKSEKQDITAEKLELQDNLESLEEVTKNLQQKVQSXXXXXXXXXXXXXXXXN--HKRNE 748 +KS + +I + K ++ N E L + ++ ++ ++S K E Sbjct: 1432 TIKSLQDEILSYKDKITRNDEKLLSIERDNKRDLESLKEQLRAAQESKAKVEEGLKKLEE 1491 Query: 749 PSKKGTQNFTKPSDSPKKNATTSNLFPNNSAAIHSPMKKCPKVDHISKSRINSSKETSK 807 S K K + KK +T +N + S M+ K D + S++E K Sbjct: 1492 ESSKEKAELEKSKEMMKKLEST---IESNETELKSSMETIRKSDEKLEQSKKSAEEDIK 1547 Score = 103 bits (257), Expect = 2e-24 Identities = 162/694 (23%), Positives = 304/694 (43%), Gaps = 141/694 (20%) Query: 91 KKTTSTDQYNR---ILKNDVAAIENDTDEDF----EITEVREVSEGVAKETK----ESHG 139 K +S D+Y +LK + DE+ E+T+ RE E K E Sbjct: 1044 KSDSSKDEYESQISLLKEKLETATTANDENVNKISELTKTREELEAELAAYKNLKNELET 1103 Query: 140 DPNDSETTLKDSKMHEYTMTNGKAPLHXXXXXXXXXXXDVLLEAFTNTQRICSNLKQELQ 199 SE LK+ K +E + K L T T++ ++L+ L+ Sbjct: 1104 KLETSEKALKEVKENEEHLKEEKIQLEKEA---------------TETKQQLNSLRANLE 1148 Query: 200 KQQQDNAKLKVRLQSY----ASNSDKINEKVGKYKSCLETLQERIATLTSHKNNQETKLK 255 ++++ L +L+ Y A+ + NE++ + + + Q+ ++ + E ++K Sbjct: 1149 SLEKEHEDLAAQLKKYEEQIANKERQYNEEISQLNDEITSTQQENESIKKKNDELEGEVK 1208 Query: 256 DLRQNHQLYQRRISGFKTSIENLNKTINDLGKNKKEADAELMKKGKEIEY----LKRELD 311 ++ + + + K+ I+ LN I +L K + +A L++ K +E +K D Sbjct: 1209 AMKSTSE---EQSNLKKSEIDALNLQIKELKKKNETNEASLLESIKSVESETVKIKELQD 1265 Query: 312 DCSGQLSEEKIKNSSLIQEMGKNREEMIKSIENFFSEDKAHHLLQFNKFEERVHDLFEKK 371 +C+ + E + E+ E+ +K+ SEDK L+ K E K Sbjct: 1266 ECNFKEKE--------VSEL----EDKLKA-----SEDKNSKYLELQKESE--------K 1300 Query: 372 LQKHFDVAKDTLNVGLRNTT-----VELSSNTETMLKQQYEDIKENLEQKMSSSKDEMA- 425 +++ D L + L T E S + + LK+ + ++N E+++ K+E+ Sbjct: 1301 IKEELDAKTTELKIQLEKITNLSKAKEKSESELSRLKKTSSEERKNAEEQLEKLKNEIQI 1360 Query: 426 ---------KTINELS--VTQK--GLIMGVQEELLTSSGNIQTALVSEMNNTRQEL---- 468 K +NE S +TQ+ I +++EL+ N E++NTR EL Sbjct: 1361 KNQAFEKERKLLNEGSSTITQEYSEKINTLEDELIRLQ-NENELKAKEIDNTRSELEKVS 1419 Query: 469 ------LDDASQTAKNYASLENLVKAYKAEIVQSNEYEERIKHLESERST---LSSQKNQ 519 L++ T K SL++ + +YK +I +++E K L ER L S K Q Sbjct: 1420 LSNDELLEEKQNTIK---SLQDEILSYKDKITRNDE-----KLLSIERDNKRDLESLKEQ 1471 Query: 520 IISSLGTKEAQYEDLVKKLEAKNIEISQISGKEQSLTEKNENLSNELKKVQDQLEKLNNL 579 + ++ +K A+ E+ +KKLE + S KE++ EL+K ++ ++KL + Sbjct: 1472 LRAAQESK-AKVEEGLKKLEEE-------SSKEKA----------ELEKSKEMMKKLES- 1512 Query: 580 NITTKSNYENKISSQNEIVKALVSENDTLKQRIQQLVEIKENEQKDHTTKLEAFQKNNEQ 639 T +SN E ++ S E ++ + + K+ ++ ++ ++E+ D +++ +K+ E+ Sbjct: 1513 --TIESN-ETELKSSMETIRKSDEKLEQSKKSAEEDIKNLQHEKSDLISRINESEKDIEE 1569 Query: 640 LQ-KLNVEVVQLKAHELELEEQNRHLKNCLEKKETGVEES------LSDV-KTLKQQVIV 691 L+ KL +E ELE + L N EK EE+ L D+ + LK + Sbjct: 1570 LKSKLRIEAKSGS----ELETVKQELNNAQEKIRINAEENTVLKSKLEDIERELKDKQAE 1625 Query: 692 LKSEKQDITAEKLELQDNLESLEEVTKNLQQKVQ 725 +KS ++ EK L L+ LE+ + QQK Q Sbjct: 1626 IKSNQE----EKELLTSRLKELEQELDSTQQKAQ 1655 Score = 89.4 bits (220), Expect = 4e-20 Identities = 143/733 (19%), Positives = 297/733 (40%), Gaps = 80/733 (10%) Query: 17 NIFAKLRVRDVDSDSSANTVVENSSNCLDVGSSIEGDDTFKKPHKTSTEQELITSMSLSQ 76 N+ +L + S+ + V EN + + +E + T K S L SL + Sbjct: 1096 NLKNELETKLETSEKALKEVKENEEHLKEEKIQLEKEATETKQQLNSLRANL---ESLEK 1152 Query: 77 RNHGYSDDMEIGSPKKTTSTDQYNRILKNDVAAIENDTDEDFEITEVREVSEG---VAKE 133 + + ++ + QYN + I + E+ I + + EG K Sbjct: 1153 EHEDLAAQLKKYEEQIANKERQYNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKS 1212 Query: 134 TKESHGDPNDSET---TLKDSKMHEYTMTNGKAPLHXXXXXXXXXXXDVLLEAFTN-TQR 189 T E + SE L+ ++ + TN + L L+ N ++ Sbjct: 1213 TSEEQSNLKKSEIDALNLQIKELKKKNETNEASLLESIKSVESETVKIKELQDECNFKEK 1272 Query: 190 ICSNLKQELQKQQQDNAKLKVRLQSYASNSDKINEKVGKYKSCLETLQERIATLTSHKNN 249 S L+ +L+ + N+K + LQ S+KI E++ + L+ E+I L+ K Sbjct: 1273 EVSELEDKLKASEDKNSKY-LELQK---ESEKIKEELDAKTTELKIQLEKITNLSKAKEK 1328 Query: 250 QETKLKDLR----QNHQLYQRRISGFKTSIENLNKTINDLGKNKKEADA----------- 294 E++L L+ + + + ++ K I+ N+ K E + Sbjct: 1329 SESELSRLKKTSSEERKNAEEQLEKLKNEIQIKNQAFEKERKLLNEGSSTITQEYSEKIN 1388 Query: 295 ----ELMKKGKEIEYLKRELDDCSGQLSEEKIKNSSLIQEMGKNREEMIKSIENFFSEDK 350 EL++ E E +E+D+ +L + + N L++E ++ IKS+++ Sbjct: 1389 TLEDELIRLQNENELKAKEIDNTRSELEKVSLSNDELLEE----KQNTIKSLQD------ 1438 Query: 351 AHHLLQFNKFEERVHDLFEKKLQKHFDVAKD--TLNVGLRNTTVELSSNTETMLKQQYED 408 + +++++ EK L D +D +L LR + E + K + E Sbjct: 1439 -----EILSYKDKITRNDEKLLSIERDNKRDLESLKEQLRAAQESKAKVEEGLKKLEEES 1493 Query: 409 IKENLEQKMSSSKDEMAKTINELSVTQKGLIMGVQEELLTSSGNIQTALVS---EMNNTR 465 KE E + S EM K + + + + E + S ++ + S ++ N + Sbjct: 1494 SKEKAELEKSK---EMMKKLESTIESNETELKSSMETIRKSDEKLEQSKKSAEEDIKNLQ 1550 Query: 466 QELLDDASQTAKNYASLENLVKAYKAEIVQSNEYEERIKHLES--ERSTLSSQKNQIISS 523 E D S+ ++ +E L + E +E E + L + E+ +++++N ++ S Sbjct: 1551 HEKSDLISRINESEKDIEELKSKLRIEAKSGSELETVKQELNNAQEKIRINAEENTVLKS 1610 Query: 524 LGTKEAQYEDLVKKLEAKNIEISQISGKEQSLTEKNENLSNELKKVQDQLEKLNNLNITT 583 + ED+ ++L+ K EI +++ LT + + L EL Q + +K Sbjct: 1611 ------KLEDIERELKDKQAEIKSNQEEKELLTSRLKELEQELDSTQQKAQKSEEERRAE 1664 Query: 584 KSNYENKISSQNEIVKALVSENDTLKQRIQQLVEIKENEQKDHTTKLEAFQKNNEQLQKL 643 ++ + S +E KA++ L+ + LV ++ ++D T + ++++KL Sbjct: 1665 VRKFQVEKSQLDE--KAML-----LETKYNDLVNKEQAWKRDEDTVKKTTDSQRQEIEKL 1717 Query: 644 NVEVVQLKAHELELEEQNRHLKNCLEKKETGVEESLSDVKTLKQQVIVLKSEKQDITAE- 702 E+ LKA +L+E N + + +++ + V L ++ +S+ +D+ E Sbjct: 1718 AKELDNLKAENSKLKEAN--------EDRSEIDDLMLLVTDLDEKNAKYRSKLKDLGVEI 1769 Query: 703 KLELQDNLESLEE 715 + +D+ E EE Sbjct: 1770 SSDEEDDEEDDEE 1782 Score = 84.7 bits (208), Expect = 1e-18 Identities = 111/539 (20%), Positives = 226/539 (41%), Gaps = 53/539 (9%) Query: 239 RIATLTSHKNNQETKLKDLRQNHQLYQRRISGFKTSIENLNKTINDLGKNKKEADAELMK 298 RI T SH ++E K + + QR+ + K I +L +N E L Sbjct: 710 RIRTALSHDPDEEPINKISFEEVEKLQRQCTKLKGEITSLQTETESTHENLTEKLIALTN 769 Query: 299 KGKEIEYLKRELDDCSGQLSEEKIKNSSLIQEMGKNREEMIKSIENFFSEDKAHH--LLQ 356 + KE++ + L+ L E + ++ + + +EM + + ++DK + LL+ Sbjct: 770 EHKELDEKYQILNSSHSSLKENFSILETELKNVRDSLDEMTQLRDVLETKDKENQTALLE 829 Query: 357 FNKFEERVHDLFEKKLQKHFDV-------AKDTLN---VGLRNTTVELSSNTETMLKQQY 406 + + D K L+K + A+D +N L + E+ + E Q Sbjct: 830 YKSTIHKQEDSI-KTLEKGLETILSQKKKAEDGINKMGKDLFALSREMQAVEENCKNLQK 888 Query: 407 EDIKENL--EQKMSSSKDEMAKTINELSVTQKGLIMGVQEELLTSSGNIQTALVSEMNNT 464 E K N+ +++ S K+++A I E+ + L EE+ N L E + Sbjct: 889 EKDKSNVNHQKETKSLKEDIAAKITEIKAINENL-----EEMKIQCNN----LSKEKEHI 939 Query: 465 RQELLDDASQTAKNYASLENLVKAYKAEIVQ-SNEYEERIKHLESERSTLSSQKNQIISS 523 +EL++ S+ + S +NLV ++ +N Y++ ES + KN+ Sbjct: 940 SKELVEYKSR----FQSHDNLVAKLTEKLKSLANNYKDMQAENESLIKAVEESKNE---- 991 Query: 524 LGTKEAQYEDLVKKLEAKNIEISQISGKEQSLTEKNENLSNELKKVQDQLEKLNNLNITT 583 Q +L K+++ + E + S+ + E L + ++ E++ + + ++ Sbjct: 992 ---SSIQLSNLQNKIDSMSQEKENFQIERGSIEKNIEQLKKTISDLEQTKEEIISKSDSS 1048 Query: 584 KSNYENKISSQNEIVKALVSENDTLKQRIQQLVEIKE----------NEQKDHTTKLE-- 631 K YE++IS E ++ + ND +I +L + +E N + + TKLE Sbjct: 1049 KDEYESQISLLKEKLETATTANDENVNKISELTKTREELEAELAAYKNLKNELETKLETS 1108 Query: 632 --AFQKNNEQLQKLNVEVVQLKAHELELEEQNRHLKNCLEKKETGVEESLSDVKTLKQQV 689 A ++ E + L E +QL+ E ++Q L+ LE E E+ + +K ++Q+ Sbjct: 1109 EKALKEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQI 1168 Query: 690 IVLKSEKQDITAEKLELQDNLESLEEVTKNLQQKVQSXXXXXXXXXXXXXXXXNHKRNE 748 ++++ E +L D + S ++ +++++K N K++E Sbjct: 1169 ---ANKERQYNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNLKKSE 1224 >MGEN-G37-01-000335 MG328 conserved hypothetical protein Length = 756 Score = 87.0 bits (214), Expect = 2e-19 Identities = 112/504 (22%), Positives = 217/504 (43%), Gaps = 84/504 (16%) Query: 247 KNNQETKLKDLRQNHQLYQRRISGFKTSIENLNKTINDLGKNKKEADAELMKK------- 299 K N ++ DL Q +RR+S K+ + K +DL + ++ +L K Sbjct: 259 KENNNDQIFDLEQEIDDLKRRLSEEKSKHLHTKKLQDDLLQENRDLYEQLQNKPVAINPL 318 Query: 300 ----GKEIEYLKRELDDCSGQLSEEKIKNSSLIQEMGKNREEMIKSIENFFSEDKAHHLL 355 +E+E LK+E S QL K K+S++ Q++ ++ + N +E + LL Sbjct: 319 SDEVNEELENLKQEKALLSDQLDALKNKSSNVQQQLA-----LLPVLNNQINE-LQNQLL 372 Query: 356 QFNKFEERVHDLFEKKLQKHFDVAKDTLNVGLRNTTVELSSNTETMLKQQYEDIKENLEQ 415 + +R+ DL E++ N L+N +L NT ++Y+D+ E Sbjct: 373 TAREANQRL-DLVEQE------------NDFLKNELKKLHDNTSNDENEKYDDLLNQYEL 419 Query: 416 KMSSSKDEMAKTINELSVTQKGLIMGVQEELLTSSGNIQTALVSEMNNTRQELLDDASQT 475 DE ++L V Q+ L + Q+ +S + + LLD+ T Sbjct: 420 LF----DENETKFDKLQVKQQALNLDYQK------------TISALKHENDVLLDEIEWT 463 Query: 476 AKNYASLENLVKAYKAEIVQSNEYEERIKHLESERSTLSSQKNQIISSLGTKEAQYEDLV 535 N N +EE+ K L+ + + L+ Q Q+ + E E Sbjct: 464 RSKDNDFNN----------TKNSFEEQKKALDEKLNGLTIQNQQLQDKIAELEEWNE--- 510 Query: 536 KKLEAKNIEISQISGKEQSLTEKNENLSNELKKVQDQLEKLNNLNITTK---SNYENKIS 592 E N+ +Q+ +Q L + ++NL N QD+L L +N+ ++ E+++S Sbjct: 511 ---EKSNLNTNQLVNLQQQLKD-SQNLFN---VAQDKLATLEEVNLALNEKINDLEDELS 563 Query: 593 ---SQNEIVKALVSENDTLKQRIQQL----VEIKENEQKD----HTTKLEAFQKNNEQLQ 641 + N ++ L ++++ L++ +L ++K+N+ D + L AF++ N +L+ Sbjct: 564 GSENSNNLLAKLQADHEILQESYGKLKTDFEKLKKNKLNDANEQYQDLLSAFEETNSELE 623 Query: 642 KLNVEVVQLKAHELELEEQNRHLKNCLEKKETGVEESLSDVKTLKQQVIVLKSEKQDITA 701 K + + +L++Q L+N KKE SD ++ LK EK+ + Sbjct: 624 KAKQSLSASDSENNQLKQQINSLENA--KKELQFTPVTSDEHL--DELETLKIEKEQLFL 679 Query: 702 EKLELQDNLESLEEVTKNLQQKVQ 725 E LQ+ L+ +++ N ++++ Sbjct: 680 ENQALQNQLQYFNDISANQTEEIK 703 >MGEN-G37-01-000221 MG218 cytadherence accessory protein (hmw2) Length = 1805 Score = 85.9 bits (211), Expect = 5e-19 Identities = 123/596 (20%), Positives = 260/596 (43%), Gaps = 88/596 (14%) Query: 186 NTQRICS-NLKQ----ELQKQQQDNAKLKVRLQSYASNSD-KINEKVGKYKSCLETLQER 239 NTQ+ NL+Q ++ K QQ+N L+ + + K ++ + K ++ + LQ + Sbjct: 332 NTQKEAFFNLRQSALIDINKLQQENELFAKHLEHQQNEFEQKQSDSLLKLETEYKALQHK 391 Query: 240 IATLTSHKNNQETKLKDL-RQNHQLYQRR--ISGFKTSIENLNKTINDLGKNKKEADAEL 296 I KN TK ++L Q +L+++R I T + + + K+ E+ Sbjct: 392 I---NEFKNESATKSEELLNQERELFEKRREIDTLLTQASLEYEHQRESSQLLKDKQNEV 448 Query: 297 MKKGKEIEYLKRELDDCSGQLSEEKIKNSSLIQEMGKNREEMIKSIENFFSEDKAHHLLQ 356 + + +EY K+ELD L ++K +S I ++ + + K +E + L++ Sbjct: 449 KQHFQNLEYAKKELDKERNLLDQQKKVDSEAIFQLKEKVAQERKELEELY-------LVK 501 Query: 357 FNKFEERVHDL--FEKKLQKHFDVAKDTLNVGLRNTTVELSSNTETMLKQQYEDIKENLE 414 K +++ ++L FEK+L++H ++ L + + + +K E+ E Sbjct: 502 KQKQDQKENELLFFEKQLKQHQADFENELEAKQQELFEAKHALERSFIKL------EDKE 555 Query: 415 QKMSSSKDEMAKTINELSVTQKGLIMGVQEELLTSSGNIQTALVSEMNNTRQE---LLDD 471 + +++ ++A ++L + + S + + L +E N +QE L + Sbjct: 556 KDLNTKAQQIANEFSQLKTDK------------SKSADFELMLQNEYENLQQEKQKLFQE 603 Query: 472 ASQTAKNYASLENLVKAYKAEIVQSNEYEERI-KHLESERSTLSSQKNQIISSLGTKEAQ 530 + +N A L N ++ + E++Q E +++ K E ER + ++++S+ E Q Sbjct: 604 RTYFERNAAVLSNRLQQKREELLQQKETLDQLTKSFEQERLINQREHKELVASV---EKQ 660 Query: 531 YEDLVKKLE---------AKNIEISQ--ISGKEQSLTEKNENLSNELKK---VQDQLEKL 576 E L KKL+ +KN+ + I KE+ + + L N++ +Q L +L Sbjct: 661 KEILGKKLQDFSQTSLNASKNLAEREMAIKFKEKEIEATEKQLLNDVNNAEVIQADLAQL 720 Query: 577 N---NLNITTKSNYENKISS-QNEIVKALVSENDTLKQRIQQLVEIKENEQKDHTTKLEA 632 N N + N + +I+ N+ +K L +L++R+Q+L ++ N QK H+ + +A Sbjct: 721 NQSLNQERSELQNAKQRIADFHNDSLKKLNEYELSLQKRLQELQTLEAN-QKQHSYQNQA 779 Query: 633 F------QKNNEQLQKLNVEVVQ-----------------LKAHELELEEQNRHLKNCLE 669 + + N E+ LN+ Q L + EL+ + L N Sbjct: 780 YFEGELDKLNREKQAFLNLRKKQTMEVDAIKQRLSDKHQALNMQQAELDRKTHELNNAFL 839 Query: 670 KKETGVEESLSDVKTLKQQVIVLKSEKQDITAEKLELQDNLESLEEVTKNLQQKVQ 725 + + + T+K+ ++ E+ + ++ E +N+ + N ++Q Sbjct: 840 NHDADQKSLQDQLATVKETQKLIDLERSALLEKQREFAENVAGFKRHWSNKTSQLQ 895 Score = 75.5 bits (184), Expect = 6e-16 Identities = 137/717 (19%), Positives = 289/717 (40%), Gaps = 83/717 (11%) Query: 64 TEQELITSMSLSQRNHGYS-DDMEIGSPKKTTSTDQYN-RILKNDVAAIENDTDEDFEIT 121 ++ L S +L++R + EI + +K D N +++ D+A + ++ E + Sbjct: 672 SQTSLNASKNLAEREMAIKFKEKEIEATEKQLLNDVNNAEVIQADLAQLNQSLNQ--ERS 729 Query: 122 EVREVSEGVAKETKESHGDPNDSETTLKDSKMHEYTMTNGKAPLHXXXXXXXXXXXDVL- 180 E++ + +A +S N+ E +L+ T+ + D L Sbjct: 730 ELQNAKQRIADFHNDSLKKLNEYELSLQKRLQELQTLEANQKQHSYQNQAYFEGELDKLN 789 Query: 181 --LEAFTNTQRI----CSNLKQELQKQQQDNAKLKVRLQSYASNSDKINEKVGKYKSCLE 234 +AF N ++ +KQ L + Q L ++ + ++N + + + Sbjct: 790 REKQAFLNLRKKQTMEVDAIKQRLSDKHQ---ALNMQQAELDRKTHELNNAFLNHDADQK 846 Query: 235 TLQERIATLTSHKNNQETKLKDLRQNHQLYQRRISGFKTSIENLNKTINDLGKNKKEADA 294 +LQ+++AT+ + + + L + + + ++GFK N + + + K+ ++ Sbjct: 847 SLQDQLATVKETQKLIDLERSALLEKQREFAENVAGFKRHWSNKTSQLQKIYELTKKQES 906 Query: 295 ELMKKGKE-------------------------IEYLKRELDDCSGQLSEEKIKNSSLIQ 329 E +K E IE +RELD + + ++ K++ + Q Sbjct: 907 EQTQKETELKIAFSDLQKDYQVFELQKDQEFRQIEAKQRELDKLAEKNNQVKLELDNRFQ 966 Query: 330 EMGKNREEMIKSIENFFSEDKAHHLLQ--FNKFEE---RVHDLFEKKLQK-HFDVAKDTL 383 + +++ +++ E +L Q FN+ E + + KK+Q H+++ K Sbjct: 967 ALQNQKQDTVQAQLELEREQHQLNLEQTAFNQANESLLKQREQLTKKIQAFHYELKKRNQ 1026 Query: 384 NVGLRNTTVELSSNTETMLKQQYEDIKENLEQKMSSSKDEMAKTINELSVTQKGL----- 438 + L+ + + Q+ + E++ + + + + EL ++ L Sbjct: 1027 FLALKGKRLFAKEQDQQRKDQEINWRFKQFEKEYTDFDEAKKRELEELEKIRRSLSQSNV 1086 Query: 439 -IMGVQEELLTSSGNIQTALVSEMNNTRQELLDDASQ---TAKNYASLENLVKAYKAEIV 494 + +E+L T N+ + N R +L Q KN+ N A KA + Sbjct: 1087 ELERKREKLATDFTNLNKVQHNTQIN-RDQLNSQIRQFLLERKNFQRFSNEANAKKAFL- 1144 Query: 495 QSNEYEERIKHLESERSTLSSQKNQIISSLGTKEAQYEDLVKKLEAKNIEISQISGKEQ- 553 IK L S S L QK + + + E K+L+ +++ Q ++Q Sbjct: 1145 --------IKRLRSFASNLKLQKEALAIQKLEFDKRDEQQKKELQQATLQLEQFKFEKQN 1196 Query: 554 ----------SLTEKNENLSNELKKVQDQLEKLNNLNITTKSNYENKISSQNEIVKALVS 603 ++ + E LS+E K + +L +L NL+ T +N SQ ++ + + Sbjct: 1197 FDIEKQRQLVAIKTQCEKLSDEKKALNQKLVELKNLSQTYLANKNKAEYSQQQLQQKYTN 1256 Query: 604 ENDTLKQRIQQLVEIKENEQKDHTTKLEAFQKN----NEQLQKLNVEVVQLKAHELELEE 659 D LK+ +++ + + + + +L F + +QL K +V K L+ E Sbjct: 1257 LLD-LKENLERTKDQLDKKHRSIFARLTKFANDLRFEKKQLLKAQ-RIVDDKNRLLKENE 1314 Query: 660 QNRH-LKNCLEKKETGVEESLSDV-KTLKQQVIVLKSEKQDITAEKLELQDNLESLE 714 +N H L N E+K +E+ +S K KQ + + +++ ++ ELQ L LE Sbjct: 1315 RNLHFLSNETERKRAVLEDQISYFEKQRKQATDAILASHKEVKKKEGELQKLLVELE 1371 Score = 70.9 bits (172), Expect = 2e-14 Identities = 129/597 (21%), Positives = 248/597 (41%), Gaps = 89/597 (14%) Query: 180 LLEAFTNTQRICSNLKQELQKQQQDNAKLKVRLQSYASNSDKINEKVGKYKSCLETLQER 239 LL+ + + NLK L+ Q +DN +L ++ + +++ + ++ + ++ Sbjct: 43 LLKEIKSLEDELKNLKG-LKNQAEDNPELDKKINHLEVDLNRLVNEYKNFQFQKNHMVDK 101 Query: 240 IA---TLTSHKNNQETKLK------------DLRQNHQLYQRRISGFKTSIENLNKTIND 284 ++ LT N+ T+L+ +L Y +++ F IEN N+TIN Sbjct: 102 VSELDNLTRFYKNELTRLQQENADFLNSKYANLANFQANYHNKLNDFHRLIENQNQTINR 161 Query: 285 L------GKNKKEADAELMKKG-----------KEIEYLKRELDDCSGQLSEEKIKNSSL 327 L +N + + L++ I+ L ELD Q I+ + Sbjct: 162 LNQKINGNQNLIDNNVALLQNPNITVEKKNYLLNVIDQLYNELDQLENQKRLLSIEYENT 221 Query: 328 IQEMGKNREEMIKSIENFFSEDKAHHLLQFNKFEERVHDLFEKKLQKHFDVAKDTLNVGL 387 +E+ E+ EN +++ Q+ + + + L E+K+Q Sbjct: 222 YRELVSADNELQNVYEN-IDQNQIQFKHQYQTYRDELSQL-ERKIQ-------------- 265 Query: 388 RNTTVELSSNTETMLKQQYEDIKENLEQKMSSSKDEMAKTINELSVTQKGLIMGVQEELL 447 T + + E+ L+ + +D + ++ + D++AK ++ K V+++L+ Sbjct: 266 --LTKQELVDKESALRVKIDDADFYINARL-AELDDVAKQLSFQDGITKQNAQHVEDKLV 322 Query: 448 TSSGNIQTALVSEMNNTRQELLDDASQTAK---NYASLENLVKAYKAEIVQSNEYEER-- 502 + + NT++E + Q+A N EN + A E Q NE+E++ Sbjct: 323 ALNKE------KDRLNTQKEAFFNLRQSALIDINKLQQENELFAKHLE-HQQNEFEQKQS 375 Query: 503 --IKHLESERSTLSSQKNQIISSLGTKEAQYEDLVKKLEAKNIEISQISGKEQSLTEKNE 560 + LE+E L + N+ + TK + + ++L K EI + + E Sbjct: 376 DSLLKLETEYKALQHKINEFKNESATKSEELLNQERELFEKRREIDTLLTQASLEYEHQR 435 Query: 561 NLSNELKKVQDQLEK-LNNLNITTK--SNYENKISSQNEIVKALVSENDTLKQRIQQLVE 617 S LK Q+++++ NL K N + Q ++ + + LK+++ Q E Sbjct: 436 ESSQLLKDKQNEVKQHFQNLEYAKKELDKERNLLDQQKKVDSEAIFQ---LKEKVAQ--E 490 Query: 618 IKENEQKDHTTKLEAFQKNNEQLQKLNVEVVQLKAH----ELELEEQNRHL---KNCLEK 670 KE E+ K + QK NE L QLK H E ELE + + L K+ LE+ Sbjct: 491 RKELEELYLVKKQKQDQKENELL----FFEKQLKQHQADFENELEAKQQELFEAKHALER 546 Query: 671 KETGVEESLSDVKTLKQQVI----VLKSEKQDITAEKLELQDNLESLEEVTKNLQQK 723 +E+ D+ T QQ+ LK++K +L LQ+ E+L++ + L Q+ Sbjct: 547 SFIKLEDKEKDLNTKAQQIANEFSQLKTDKSKSADFELMLQNEYENLQQEKQKLFQE 603 Score = 65.1 bits (157), Expect = 9e-13 Identities = 136/675 (20%), Positives = 265/675 (39%), Gaps = 124/675 (18%) Query: 134 TKESHGDPNDSETTLK---DSKMHEYTMTNGKAPLHXXXXXXXXXXXDVLLEAFTNTQRI 190 TK+ + ET LK +Y + + D L E + Sbjct: 901 TKKQESEQTQKETELKIAFSDLQKDYQVFELQKDQEFRQIEAKQRELDKLAEKNNQVKLE 960 Query: 191 CSNLKQELQKQQQDNAKLKVRLQ------------------SYASNSDKINEKVGKYKSC 232 N Q LQ Q+QD + ++ L+ S +++ +K+ + Sbjct: 961 LDNRFQALQNQKQDTVQAQLELEREQHQLNLEQTAFNQANESLLKQREQLTKKIQAFHYE 1020 Query: 233 LETLQERIAT----LTSHKNNQETKLKDLRQNHQLYQRRISGF----KTSIENLNKTIND 284 L+ + +A L + + +Q+ K +++ + +++ + F K +E L K Sbjct: 1021 LKKRNQFLALKGKRLFAKEQDQQRKDQEINWRFKQFEKEYTDFDEAKKRELEELEKIRRS 1080 Query: 285 LGKNKKEADAELMKKGKEIEYLKR-------ELDDCSGQLSE---EKIKNSSLIQEMGKN 334 L ++ E + + K + L + D + Q+ + E+ E Sbjct: 1081 LSQSNVELERKREKLATDFTNLNKVQHNTQINRDQLNSQIRQFLLERKNFQRFSNEANAK 1140 Query: 335 REEMIKSIENFFSEDK------AHHLLQFNKFEERVH-DLFEKKLQ--------KHFDVA 379 + +IK + +F S K A L+F+K +E+ +L + LQ ++FD+ Sbjct: 1141 KAFLIKRLRSFASNLKLQKEALAIQKLEFDKRDEQQKKELQQATLQLEQFKFEKQNFDIE 1200 Query: 380 KDTLNVGLRNTTVELSSNTETMLKQQYEDIKENLEQKMSSSKDEMAKTINELSVTQKGLI 439 K V ++ T E S+ + L Q+ ++K NL Q ++K++ + +L L+ Sbjct: 1201 KQRQLVAIK-TQCEKLSDEKKALNQKLVELK-NLSQTYLANKNKAEYSQQQLQQKYTNLL 1258 Query: 440 ------MGVQEELLTSSGNIQTALVSEMNNTR---------QELLDDASQTAK-NYASLE 483 +++L +I L N+ R Q ++DD ++ K N +L Sbjct: 1259 DLKENLERTKDQLDKKHRSIFARLTKFANDLRFEKKQLLKAQRIVDDKNRLLKENERNLH 1318 Query: 484 NLVKAYKAEIVQSNEYEERIKHLESERSTLSSQKNQIISSL-------GTKEAQYEDLVK 536 L SNE E + LE + S Q+ Q ++ KE + + L+ Sbjct: 1319 FL----------SNETERKRAVLEDQISYFEKQRKQATDAILASHKEVKKKEGELQKLLV 1368 Query: 537 KLEAKNIEISQISGKEQSLTEKNENLSNELKKVQDQLEKLNNLNITTKSNYENKISSQNE 596 +LE + +++ K E+ EN +L ++Q L+ N N N Sbjct: 1369 ELETRKTKLNNDFAKFSRQREEFENQRLKLLELQKTLQTQTNSN--------------NF 1414 Query: 597 IVKALVSENDTLKQRIQQLVEIKENEQKDHTTKLEAFQKNNEQLQ------KLNVEVVQL 650 KA+ ++ K+ +++L K+ K+ + E F+K ++++ KL ++ Q Sbjct: 1415 KTKAIQEIENSYKRGMEELNFQKKEFDKNKSRLYEYFRKMRDEIERKESQVKLVLKETQR 1474 Query: 651 KAHELELEEQNRHL-KNCLEKKETGVEESLSDVKTLKQQVIVLKSEKQDITAEKLELQDN 709 KA+ LE + ++ KN ++ KE ++K K +V QDI + + ++ Sbjct: 1475 KANLLEAQANKLNIEKNTIDFKE-------KELKAFKDKV------DQDIDSTNKQRKEL 1521 Query: 710 LESLEEVTKNLQQKV 724 E L E K LQQ + Sbjct: 1522 NELLNE-NKLLQQSL 1535 Score = 63.2 bits (152), Expect = 3e-12 Identities = 106/535 (19%), Positives = 219/535 (40%), Gaps = 87/535 (16%) Query: 243 LTSHKNNQETKLKDLRQNHQLYQRRISGFKTSIENLNKTINDLGKNKKEADAELMKKGKE 302 L S N + +++ QN ++ + ++ + L + I + + ++ L K + Sbjct: 225 LVSADNELQNVYENIDQNQIQFKHQYQTYRDELSQLERKIQLTKQELVDKESALRVKIDD 284 Query: 303 IEYLKR----ELDDCSGQLSEEK---IKNSSLIQE----MGKNREEMIKSIENFFSEDKA 351 ++ ELDD + QLS + +N+ +++ + K ++ + E FF+ ++ Sbjct: 285 ADFYINARLAELDDVAKQLSFQDGITKQNAQHVEDKLVALNKEKDRLNTQKEAFFNLRQS 344 Query: 352 HHLLQFNKFEERVHDLFEKKLQKHFDVAKDTLNVGLRNTTVELSSNTETMLKQQYEDIKE 411 L+ NK ++ ++LF K L+ +N + S++ L+ +Y+ Sbjct: 345 A-LIDINKLQQE-NELFAKHLEHQ------------QNEFEQKQSDSLLKLETEYKA--- 387 Query: 412 NLEQKMSSSKDEMAKTINELSVTQKGLIMGVQE--ELLTSSGNIQTALVSEMNNTRQELL 469 L+ K++ K+E A EL ++ L +E LLT Q +L E +LL Sbjct: 388 -LQHKINEFKNESATKSEELLNQERELFEKRREIDTLLT-----QASLEYEHQRESSQLL 441 Query: 470 DDASQTAKNYASLENLVKAYKAEIVQSNEYEERIKHLESE-------------------- 509 D K + +NL A K E+ + ++ K ++SE Sbjct: 442 KDKQNEVKQH--FQNLEYA-KKELDKERNLLDQQKKVDSEAIFQLKEKVAQERKELEELY 498 Query: 510 ---RSTLSSQKNQIISSLGTKEAQYEDLVKKLEAKNIEISQ-----------ISGKEQSL 555 + ++N+++ + D +LEAK E+ + + KE+ L Sbjct: 499 LVKKQKQDQKENELLFFEKQLKQHQADFENELEAKQQELFEAKHALERSFIKLEDKEKDL 558 Query: 556 TEKNENLSNELKKVQDQLEKLNNLNITTKSNYENKISSQNEIVKA---LVSENDTLKQRI 612 K + ++NE +++ K + + ++ YEN + ++ + L R+ Sbjct: 559 NTKAQQIANEFSQLKTDKSKSADFELMLQNEYENLQQEKQKLFQERTYFERNAAVLSNRL 618 Query: 613 QQLVEIKENEQKDHTTKLEAFQKNNEQLQKLNVEVVQLKAHELELEEQNRHLKNCLEKK- 671 QQ K E L+ K+ EQ + +N + EL K L KK Sbjct: 619 QQ----KREELLQQKETLDQLTKSFEQERLIN------QREHKELVASVEKQKEILGKKL 668 Query: 672 ETGVEESLSDVKTLKQQVIVLKSEKQDITAEKLELQDNLESLEEVTKNLQQKVQS 726 + + SL+ K L ++ + +K ++++I A + +L +++ + E + +L Q QS Sbjct: 669 QDFSQTSLNASKNLAEREMAIKFKEKEIEATEKQLLNDVNNAEVIQADLAQLNQS 723 Score = 61.2 bits (147), Expect = 1e-11 Identities = 99/487 (20%), Positives = 193/487 (39%), Gaps = 65/487 (13%) Query: 188 QRICSNLKQELQKQQQDNAKLKVRLQSYASNSDKINEKVGKYKSCLETLQERIATLTSHK 247 Q++ + + E QK++ A L++ + + I ++ + ++T E+++ Sbjct: 1165 QKLEFDKRDEQQKKELQQATLQLEQFKFEKQNFDIEKQ--RQLVAIKTQCEKLSDEKKAL 1222 Query: 248 NNQETKLKDLRQNH-----------QLYQRRISGFKTSIENLNKTINDLGKNKKEADAEL 296 N + +LK+L Q + Q Q++ + ENL +T + L K + A L Sbjct: 1223 NQKLVELKNLSQTYLANKNKAEYSQQQLQQKYTNLLDLKENLERTKDQLDKKHRSIFARL 1282 Query: 297 MKKGKEIEYLKRELDDCSGQLSEEKIKNSSLIQEMGKNREEMIKSIENFFSEDKAHHLLQ 356 K ++ + K++L L ++I + + K E + + N +A Q Sbjct: 1283 TKFANDLRFEKKQL------LKAQRIVDDK--NRLLKENERNLHFLSNETERKRAVLEDQ 1334 Query: 357 FNKFEERVHDLFEKKLQKHFDVAKDTLNVGLRNTTVELSSNTETMLKQQYEDIKENLEQK 416 + FE++ + L H +V K L+ VEL + +T L + K Sbjct: 1335 ISYFEKQRKQATDAILASHKEVKKKEGE--LQKLLVELETR-KTKLNNDFA--------K 1383 Query: 417 MSSSKDEMAKTINELSVTQKGLIMGVQEELLTSSGNIQTALVSEMNNTRQELLDDASQTA 476 S ++E +L QK L + T+S N +T + E+ N+ + +++ + Sbjct: 1384 FSRQREEFENQRLKLLELQKTL------QTQTNSNNFKTKAIQEIENSYKRGMEELNFQK 1437 Query: 477 KNYASLENLVKAYKAEIVQSNEYEERIKHLESERSTLSSQKNQIISSLGTKEAQYEDLVK 536 K + +N + Y E + + E SQ ++ K E Sbjct: 1438 KEFD--KNKSRLY-----------EYFRKMRDEIERKESQVKLVLKETQRKANLLEAQAN 1484 Query: 537 KLEAKNIEISQISGKEQSLTEKNENLSNELKKVQDQLEKLNNLNITTKSNYENKISSQN- 595 KL NIE + I KE+ L + + ++ Q ++LN L ENK+ Q+ Sbjct: 1485 KL---NIEKNTIDFKEKELKAFKDKVDQDIDSTNKQRKELNEL------LNENKLLQQSL 1535 Query: 596 -EIVKALVSENDTLKQRIQQLVEIKENEQKDHTTKLEAFQKNNEQLQKLNVEVVQLKAHE 654 E +A+ S++ L ++I+ IK L + QK E+ +L+ Sbjct: 1536 IERERAINSKDSLLNKKIE---TIKRQLHDKEMRVLRLVDRMKLAEQKYQTEINRLRTQT 1592 Query: 655 LELEEQN 661 + E+Q+ Sbjct: 1593 FDSEKQD 1599 Score = 50.1 bits (118), Expect = 3e-08 Identities = 90/519 (17%), Positives = 212/519 (40%), Gaps = 75/519 (14%) Query: 180 LLEAFTNTQRICSNLKQELQKQQQDNAKLKVRLQSYASNSDKINEKVGKYKSCLETLQER 239 L + +TN + NL++ + + + + RL +A++ +++ K + ++ ++ Sbjct: 1250 LQQKYTNLLDLKENLERTKDQLDKKHRSIFARLTKFANDLRFEKKQLLKAQRIVD---DK 1306 Query: 240 IATLTSHKNNQETKLKDLRQNHQLYQRRISGFKTSIENLNKTINDLGKNKKEADAELMKK 299 L ++ N + + + + +IS F+ + I K K+ + EL K Sbjct: 1307 NRLLKENERNLHFLSNETERKRAVLEDQISYFEKQRKQATDAILASHKEVKKKEGELQKL 1366 Query: 300 GKEIEYLKRELDDCSGQLSE--EKIKNSSL-IQEMGKN----------REEMIKSIENFF 346 E+E K +L++ + S E+ +N L + E+ K + + I+ IEN + Sbjct: 1367 LVELETRKTKLNNDFAKFSRQREEFENQRLKLLELQKTLQTQTNSNNFKTKAIQEIENSY 1426 Query: 347 S---EDKAHHLLQFNKFEERVHDLFEKKLQKHFDVAKDTLNVGLRNTT------------ 391 E+ +F+K + R+++ F +K++ + + + + L+ T Sbjct: 1427 KRGMEELNFQKKEFDKNKSRLYEYF-RKMRDEIERKESQVKLVLKETQRKANLLEAQANK 1485 Query: 392 VELSSNTETMLKQQYEDIKENLEQKMSSS---KDEMAKTINELSVTQKGLIMGVQEELLT 448 + + NT +++ + K+ ++Q + S+ + E+ + +NE + Q+ LI +E + Sbjct: 1486 LNIEKNTIDFKEKELKAFKDKVDQDIDSTNKQRKELNELLNENKLLQQSLIE--RERAIN 1543 Query: 449 SSGNIQTALV-----------------------------SEMNNTRQELLDDASQTAKNY 479 S ++ + +E+N R + D Q KN+ Sbjct: 1544 SKDSLLNKKIETIKRQLHDKEMRVLRLVDRMKLAEQKYQTEINRLRTQTFDSEKQDIKNF 1603 Query: 480 ASLENLVKAYKAEIVQSNEYEERIKHLESERSTLSSQKNQIISS-LGTKEAQYEDLVKKL 538 L K ++ Y + + +TL Q Q+ L + +YE+ + +L Sbjct: 1604 --FPPLFKINGNDMAFPYLYPWLYPQQKQDDNTL--QIRQLFEQQLQFMQQRYENELNEL 1659 Query: 539 EAKNIEISQISGKEQSLTEKNENLSNELKKVQDQLEKLNNLNITTKSNYENKISSQNEIV 598 + + + + Q ++ N N +E KV+ +EKL + ++++ KI N + Sbjct: 1660 RRQRNLLEKKLDQIQLESQLN-NKQSEFSKVESMMEKLLEKTESRLNDFDQKI---NYLT 1715 Query: 599 KALVSENDTLKQRIQQLVEIKENEQKDHTTKLEAFQKNN 637 K + N Q ++++++ +++ +K N Sbjct: 1716 KKVNQHNTYQPSSYQPTPSYQDSDKQQLLFRIQELEKQN 1754 >SCER-S28-01-002651 ORFP:YHR023W MYO1, Chr VIII from 151657-157443 Length = 1928 Score = 79.3 bits (194), Expect = 4e-17 Identities = 157/708 (22%), Positives = 294/708 (41%), Gaps = 82/708 (11%) Query: 53 DDTFKKPHKTSTEQELITSMSLSQRNHGYSDDMEIGSPKKTTSTDQYNRILKNDVAAIEN 112 +D+ K + QE+ + L++R G S + I S +++TS + + K D+ I+ Sbjct: 1177 NDSKIKELEARLSQEISLNQYLNKRISGNSVETNISSTRRSTSYSD-DPLDKEDI--IKK 1233 Query: 113 DTDEDFEITEVREVSEGVAKETKESHGDPNDSETTLKDSKMHEYTMTNGKAPLHXXXXXX 172 D TE+ E +E K +ET L S + + KA + Sbjct: 1234 YYDLQLAFTEITRNLENEIEEKKNLISRLRFTETRLASSSFEDQKI---KAQMKKLKKLI 1290 Query: 173 XXXXXDVLLEAFTNTQRI-CSNLKQELQKQQQDNAKLKVRLQSYASNSDKINEKVGKYKS 231 + L++ N C + + ++ K + LK +L + S Sbjct: 1291 QDMDPSIPLDSILNEPLDNCPDKESDINKLMLEVDYLKRQLDIETRAHYDAENAI----S 1346 Query: 232 CLETLQERIATLTSHKNNQETKLKDLRQNHQLYQRRISGFKTSIENL------NKTINDL 285 L + +I +S ++ KLK + + R+ + ++ + N + D+ Sbjct: 1347 ALHSKFRKIQGESSLSSSDIYKLK-----FEASEERVKSLEDKLKTMPLRDRTNLPVGDI 1401 Query: 286 GKNKKEADAELMKKGKEIEYLKRELDDCSGQLSEEKIKNSSLIQEMGKNREEMIKSIENF 345 KN+ + K +EI Y K E L+E K S L ++ ++ KS E Sbjct: 1402 IKNRDS----ISKYEEEIRYYKLENYKLQEILNESNGKLSQLTLDLRQS-----KSKEAL 1452 Query: 346 FSE--DKAHHLLQFNKFEERVHDLFEKKLQKHFDVAKDTLNVGLRNTTVELSSNTETMLK 403 SE D+ L+ + ++ + K+ ++ F+ D L + + L + LK Sbjct: 1453 LSEQLDRLQKDLESTERQKELLSSTIKQQKQQFENCMDDL----QGNELRLREHIHA-LK 1507 Query: 404 QQYEDIKE--NLEQKMSSSKDEMAKTINELSVTQKGLIMGVQEELLTSSG--NIQTALVS 459 Q ED+K ++ +K+ + + K I E + + M +QE LL +++ L Sbjct: 1508 QAEEDVKNMASIIEKLKTQNKQKEKLIWEREMERNDSDMQLQETLLELKRVQDVKKILSD 1567 Query: 460 EMNNTRQEL--LDDASQTAKNYASL-ENLVKAYKAEIVQSNEYEERIKHLESERSTLSSQ 516 ++ + ++ L ++D SQ L E L + KAE E+ LE+ + ++ Sbjct: 1568 DLAHLKERLSAVEDRSQYTDEINRLKEELNCSLKAETNLKKEFATLKYKLETSTNDSEAK 1627 Query: 517 KNQIISSLG--TKEAQY------------EDLVKKLEAKNIEISQISGKEQSLTEKNENL 562 + ++ L TK + ++L +K EA N E + GK SLT+ + L Sbjct: 1628 ISDLLKQLDHYTKVVEMLNNEKDAISLAEKELYQKYEALNTECESLKGKIVSLTKIKQEL 1687 Query: 563 SNELKKVQDQLEKLN-NLNITTKSNYE--NKISSQNEIVKALV---SENDTLKQRIQQLV 616 ++L + D L+ N L+ +T+ N E KI E ++ + S N L + +Q Sbjct: 1688 ESDLNQKTDALQISNAALSSSTQKNKEITEKIKYLEETLQLQMEQNSRNGELVKTLQASC 1747 Query: 617 EIKENEQKDHTTKLEAFQKNNEQLQKLNVEVVQLKAHELELEEQNRHLKNCLEKKETGVE 676 +++ D K + N+ LQKLN ++ +L+L+ + L + EK Sbjct: 1748 NGYKDKFDDEKQKNIDLYEENQTLQKLNTDL------QLQLKNLHERLSDTTEKNAW--- 1798 Query: 677 ESLSDVKTLKQQVIVLKSEKQDITAEKLELQDNLE-SLEEV-TKNLQQ 722 LS + L+ V S + D+ E+++ +LE ++EE+ TKN QQ Sbjct: 1799 --LSKIHELENMV----SLETDLKYEEMKKNKSLERAVEELQTKNSQQ 1840 Score = 73.6 bits (179), Expect = 2e-15 Identities = 113/519 (21%), Positives = 208/519 (40%), Gaps = 93/519 (17%) Query: 192 SNLKQELQKQQQDNAKLKVRLQSYASNSDKINEKVGKYKSCLETLQERIATLTSHKNNQE 251 SN +K + KLK LQ S + EK K + LE Q+ + NQE Sbjct: 857 SNDMTRTKKFNEQINKLKNDLQEMESKKKFLEEKNQKTVNELENTQDLL--------NQE 908 Query: 252 TKLKDLRQNHQLYQRRISGFKTSIENLNKTINDLGKNKKEADAELMKKGKEIEYLKRELD 311 + +LR+N L R KTS E L K +DL K E E ++ + +E +++ Sbjct: 909 KE--NLRKNESLLNR----VKTSSETLQKQFDDLVSEKDEISREKLEVAQNLEEAHQKIQ 962 Query: 312 DCSGQLSEEKIKNSSLIQEMGKNREEMIKSIE----NFFSEDKAHHLLQFNKFEERVHDL 367 L E + + ++++ E+IK I + E + L++ +K Sbjct: 963 G----LQETIREREATLEKLHSKNNELIKQISDLNCDISKEQSSQSLIKESKL------- 1011 Query: 368 FEKKLQKHFDVAKDTLNVGLRNTTVELSSNTETMLKQQYEDIKENLEQKMSSSKDEMAKT 427 KL+ KD +N + E+IK + K+SSS+++ Sbjct: 1012 ---KLENEIKRLKDVIN-------------------SKEEEIK-SFNDKLSSSEED---- 1044 Query: 428 INELSVTQKGLIMGVQEELLTSSGNIQTALVSEMNNTRQELLDDASQTAKNYASLENLVK 487 + ++ L + NI + + + +L K A+L N +K Sbjct: 1045 ------------LDIKLVTLEKNCNIAMSRLQSLVTENSDLRSKNENFKKEKAALNNQLK 1092 Query: 488 AYKAEIVQSNEYEERIKHLESERSTLSSQKNQIISSLGTKEAQYEDLVKKLEAKNIEISQ 547 ++E++ + +E+I + + E +T S Q++ +S G + +L+ I++++ Sbjct: 1093 NKESELL---KMKEKIDNHKKELATFSKQRDDAVSEHG-------KITAELKETRIQLTE 1142 Query: 548 ISGKEQSLTEKNENLSNELKKVQDQLEKLNNLNITTKSNYENKISSQNEIVKALVSENDT 607 Q + E+ N E K+ Q+Q ++ N +S ++KI + +S N Sbjct: 1143 YKSNYQKIKEEYSNFQRETKE-QEQKKR----NSLVESLNDSKIKELEARLSQEISLNQY 1197 Query: 608 LKQRIQ-QLVEI------KENEQKDHTTKLEAFQKNNEQLQKLNVEVVQLKAHELELEEQ 660 L +RI VE + D E K LQ E+ + +E+ E+ Sbjct: 1198 LNKRISGNSVETNISSTRRSTSYSDDPLDKEDIIKKYYDLQLAFTEITRNLENEI---EE 1254 Query: 661 NRHLKNCLEKKETGVEESLSDVKTLKQQVIVLKSEKQDI 699 ++L + L ET + S + + +K Q+ LK QD+ Sbjct: 1255 KKNLISRLRFTETRLASSSFEDQKIKAQMKKLKKLIQDM 1293 Score = 65.5 bits (158), Expect = 7e-13 Identities = 121/610 (19%), Positives = 239/610 (39%), Gaps = 86/610 (14%) Query: 186 NTQRICSNLKQELQKQQQ-------DNAKLKVRLQSYASNSDKIN-----------EKVG 227 NTQ + + K+ L+K + + L+ + S D+I+ E Sbjct: 900 NTQDLLNQEKENLRKNESLLNRVKTSSETLQKQFDDLVSEKDEISREKLEVAQNLEEAHQ 959 Query: 228 KYKSCLETLQERIATLTS--HKNNQETK-LKDLR---QNHQLYQRRISGFKTSIENLNKT 281 K + ET++ER ATL KNN+ K + DL Q Q I K +EN K Sbjct: 960 KIQGLQETIREREATLEKLHSKNNELIKQISDLNCDISKEQSSQSLIKESKLKLENEIKR 1019 Query: 282 INDLGKNKKEADAELMKKGKEIEYLKRELDDCSGQLSEEKIKNSSLIQEMGKNREEMIKS 341 + D+ +K+E E+ ++ + +LD L + S +Q + ++ Sbjct: 1020 LKDVINSKEE---EIKSFNDKLSSSEEDLDIKLVTLEKNCNIAMSRLQSLVTENSDLRSK 1076 Query: 342 IENFFSEDKAHHLLQFNKFEERVHDLFEKKLQKH------FDVAKDT-------LNVGLR 388 ENF E A + NK E + ++K+ H F +D + L+ Sbjct: 1077 NENFKKEKAALNNQLKNKESELLK--MKEKIDNHKKELATFSKQRDDAVSEHGKITAELK 1134 Query: 389 NTTVELSS--NTETMLKQQYEDIKENLEQKMSSSKDEMAKTINELSVTQKGLIMGVQEEL 446 T ++L+ + +K++Y + + +++ ++ + +++N+ + K L + +E+ Sbjct: 1135 ETRIQLTEYKSNYQKIKEEYSNFQRETKEQEQKKRNSLVESLNDSKI--KELEARLSQEI 1192 Query: 447 LTS-------SGNIQTALVSEMNNTRQELLD--DASQTAKNYASLE----NLVKAYKAEI 493 + SGN +S + D D K Y L+ + + + EI Sbjct: 1193 SLNQYLNKRISGNSVETNISSTRRSTSYSDDPLDKEDIIKKYYDLQLAFTEITRNLENEI 1252 Query: 494 VQSNEYEERIKHLESERSTLSSQKNQIISSLGTKEAQYEDLVKKLEAKN--IEISQISGK 551 + R++ E+ ++ S + +I +AQ + L K ++ + I + I + Sbjct: 1253 EEKKNLISRLRFTETRLASSSFEDQKI-------KAQMKKLKKLIQDMDPSIPLDSILNE 1305 Query: 552 EQSLTEKNENLSNELKKVQDQLEKLNNLNITTKSNY--ENKISSQNEIVKALVSENDTLK 609 E+ N+L D L++ L+I T+++Y EN IS+ + + + E+ Sbjct: 1306 PLDNCPDKESDINKLMLEVDYLKR--QLDIETRAHYDAENAISALHSKFRKIQGESSLSS 1363 Query: 610 QRIQQL-VEIKENEQKDHTTKLEAFQ-------------KNNEQLQKLNVEVVQLKAHEL 655 I +L E E K KL+ KN + + K E+ K Sbjct: 1364 SDIYKLKFEASEERVKSLEDKLKTMPLRDRTNLPVGDIIKNRDSISKYEEEIRYYKLENY 1423 Query: 656 ELEEQNRHLKNCLEKKETGVEESLSDVKTLKQQVIVLKSEKQDITAEKLELQDNLESLEE 715 +L+E L + + +S S L +Q+ L+ + + +K L ++ ++ Sbjct: 1424 KLQEILNESNGKLSQLTLDLRQSKSKEALLSEQLDRLQKDLESTERQKELLSSTIKQQKQ 1483 Query: 716 VTKNLQQKVQ 725 +N +Q Sbjct: 1484 QFENCMDDLQ 1493 Score = 55.5 bits (132), Expect = 7e-10 Identities = 48/202 (23%), Positives = 97/202 (48%), Gaps = 30/202 (14%) Query: 526 TKEAQYEDLVKKLEAKNIEISQISGKEQSLTEKNENLSNELKKVQDQLEKLNNLNITTKS 585 T+ ++ + + KL KN ++ ++ K++ L EKN+ NEL+ QD L Sbjct: 861 TRTKKFNEQINKL--KN-DLQEMESKKKFLEEKNQKTVNELENTQDLL------------ 905 Query: 586 NYENKISSQNE-IVKALVSENDTLKQRIQQLVEIKENEQKDHTTKLEAFQKNNEQLQKLN 644 N E + +NE ++ + + ++TL+++ LV K+ ++ KLE Q E QK+ Sbjct: 906 NQEKENLRKNESLLNRVKTSSETLQKQFDDLVSEKDEISRE---KLEVAQNLEEAHQKIQ 962 Query: 645 VEVVQLKAHELELEEQNRHLKNCLEKKETGVEESLSDVKTLKQQVIVLKSEKQDITAEKL 704 L+E R + LEK + E + + L + +S + I KL Sbjct: 963 -----------GLQETIREREATLEKLHSKNNELIKQISDLNCDISKEQSSQSLIKESKL 1011 Query: 705 ELQDNLESLEEVTKNLQQKVQS 726 +L++ ++ L++V + +++++S Sbjct: 1012 KLENEIKRLKDVINSKEEEIKS 1033 >MPNE-M12-01-000474 gi|13508213|ref|NP_110162.1| coiled coil protein, putative structural protein involved in cytosceleton [Mycoplasma pneumoniae] Length = 1033 Score = 75.5 bits (184), Expect = 6e-16 Identities = 129/573 (22%), Positives = 240/573 (41%), Gaps = 94/573 (16%) Query: 178 DVLLEAFTNTQRICSNLKQELQKQQ----------QDNAKLKVRLQSYASNSDKINEKVG 227 ++L TN + + L+Q+L K Q ++N LK LQ+ ++++N + Sbjct: 398 ELLQNQNTNLTQELNELQQKLFKSQNNSLLLARLEEENRTLKQHLQNNLPEANQLNFVLE 457 Query: 228 KYKSCLETLQERIATLTSHKNNQETKLKDLRQNHQLYQRRISGFKTSIENLNKTINDLGK 287 K LE LQ+ +LT Q + K + HQ I ++ I +L + L Sbjct: 458 KQ---LEQLQQDKHSLTL----QIEQYKFDSKKHQEQLALIPSLRSEINSLETEVISL-- 508 Query: 288 NKKEADAELMKKGKEIEYLKRELDDC-SGQLSEEKIKNSSLIQE---MGKNREEMIKSIE 343 K+ + L +E +LK E+ +L++E K +L+++ M + + +K +E Sbjct: 509 --KQTNQRLSLIERENNFLKTEIKQLRETKLNDENTKYRNLLKQYELMRADSDAKLKELE 566 Query: 344 NFFSEDKAHHLLQFNKFEERVHDLFEKKLQKHFDVAKDTLNVGLRNTTVELSSNTETMLK 403 + HH Q +LQ+H + L+ ++ T EL + Sbjct: 567 HEQHLAHQHHQEQL------------AQLQRHNEALVKELDQ-VKATNFELG-----LAA 608 Query: 404 QQYEDIKENLEQKMSS---SKDEMAKTINELSVTQKGLIMGVQEELLTSSGNIQTALVSE 460 Q +E K LEQK SS S + + L +T L Q +L + +TA S+ Sbjct: 609 QGFEQQKVVLEQKNSSLLASLQAAEENVQALGITNSELQN--QLNVLEFTHKEKTAFDSK 666 Query: 461 -MNNTRQELLD---DASQTAKNYA-------SLENLVKAYKAEIVQSNEYEERIKHLESE 509 + T+Q+L D S T + A SL + + A + ++ + +E + L+++ Sbjct: 667 TLTLTKQQLEQTQFDLSLTQEQLATFKQQNQSLTDKLMASETQLNHLQQSDENLTQLQTQ 726 Query: 510 RSTLSSQKNQIISSLGTKEAQYEDLVKKLEAKNIEISQISGKEQSLTEKNENLSNELKKV 569 L N++ + Q+ +L+A + +++ + LT+K N+ NE Sbjct: 727 HELLQESYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEELTDKCSNIQNE---- 782 Query: 570 QDQLEKLNNLNITTKSNYENKISSQNEIVKALVSENDTLKQRIQQLVEIKENEQKDHTTK 629 L++LN K+N+EN L +E++ L+ + Q KE Q +H + Sbjct: 783 ------LHDLN-RVKTNWEN-----------LNTEHNLLQDKYAQQ---KEQMQHEH-SN 820 Query: 630 LEAFQKNNEQLQKLNVEVVQLKAHELELEEQNRHLKNCLEKKETGVEESLSDVKTLKQQV 689 L Q +E LQ+ + V+ + +E+++ L + ++ LS + L+ Sbjct: 821 LAQIQAEHELLQE-SYNKVKAELNEIQITN--------LNEANAQYQDLLSAYELLQSNH 871 Query: 690 IVLKSEKQDITAEKLELQDNLESLEEVTKNLQQ 722 LK E Q + LE Q + L ++L Q Sbjct: 872 NKLKQELQVLNQVNLEKQQLAQKLHNTHQSLSQ 904 Score = 55.8 bits (133), Expect = 5e-10 Identities = 88/388 (22%), Positives = 169/388 (43%), Gaps = 59/388 (15%) Query: 390 TTVELSSNT----ETMLKQQYEDIKEN---LEQKMSSSKDEMAKTINELSVTQKGL---- 438 TTV+ ++ T +T++ + ED L++++++ + ++ + ++ + Q L Sbjct: 269 TTVDKANLTNALSQTVVIKPAEDSAHQSAVLDKEIATKQAQLQQLQAQIELRQAQLETPP 328 Query: 439 --IMGVQEELLTSSGNI---QTALVSEMNNTRQELLDDASQTAKNYASLENLVKAYKAEI 493 MGV+E L ++ Q + EM +++L A LE + A + Sbjct: 329 VTYMGVEEYKLLPVQDVVPVQPTVSFEMTLLQEQLDKALKHNAALQIQLEEQL-AKPLQY 387 Query: 494 VQSNEYEERIKHLESERSTLSSQKNQIISSLGTKEAQYEDLVKKLEAKNI---------- 543 QS +ERI+ L+++ + L+ + N++ L K L+ +LE +N Sbjct: 388 DQSPVLQERIELLQNQNTNLTQELNELQQKL-FKSQNNSLLLARLEEENRTLKQHLQNNL 446 Query: 544 ------------EISQISGKEQSLTEKNENLSNELKKVQDQLEKLNNLNITTKSNYENKI 591 ++ Q+ + SLT + E + KK Q+QL + +L S I Sbjct: 447 PEANQLNFVLEKQLEQLQQDKHSLTLQIEQYKFDSKKHQEQLALIPSLRSEINSLETEVI 506 Query: 592 SSQ--NEIVKALVSENDTLKQRIQQLVEIKENEQKDHTTKLEAFQKNNE--------QLQ 641 S + N+ + + EN+ LK I+QL E K N D TK K E +L+ Sbjct: 507 SLKQTNQRLSLIERENNFLKTEIKQLRETKLN---DENTKYRNLLKQYELMRADSDAKLK 563 Query: 642 KLNVEV-VQLKAHELELEEQNRH----LKNCLEKKETGVEESLSDVKTLKQQVIVLKSEK 696 +L E + + H+ +L + RH +K + K T E L+ + +QQ +VL+ + Sbjct: 564 ELEHEQHLAHQHHQEQLAQLQRHNEALVKELDQVKATNFELGLA-AQGFEQQKVVLEQKN 622 Query: 697 QDITAEKLELQDNLESLEEVTKNLQQKV 724 + A ++N+++L LQ ++ Sbjct: 623 SSLLASLQAAEENVQALGITNSELQNQL 650 >SYNE-PCC-01-001071 sll1583 Length = 562 Score = 52.8 bits (125), Expect = 5e-09 Identities = 55/292 (18%), Positives = 128/292 (43%), Gaps = 22/292 (7%) Query: 430 ELSVTQKGLIMGVQEELLTSSGNIQTALVSEMNNTRQELLDDASQTAKNYASLENLVKAY 489 E + KG + ++++L + +++ AL + +Q +NY + E +V A Sbjct: 68 EAVIHAKGKLRRLEKDLQSVQASLENALA------------ERNQLTENYQAQEKMVAAL 115 Query: 490 KAEIVQSNEYE-ERIKHLESERSTLSSQKNQIISSLGTKEAQYEDLVKKLEAKNIEISQI 548 + ++ ++ + E+ L+ L + + L K+A E V + K ++++ + Sbjct: 116 QHQLAHYDDIQSEKFVGLQKLNQELLQENTNLSDRL--KQAVNE--VAETRPKLVQLNSL 171 Query: 549 SGKEQSLTEKNENLS-NELKKVQDQLEKLNNL----NITTKSNYENKISSQNEIVKALVS 603 + Q L+++ + N+ K ++ +L L + ++ + ++ S E V+ L + Sbjct: 172 VTRNQQLSDQLSYVEQNQAKAIEQRLASQEKLWQQRHEQEQAQWNSQASQWEEQVRQLTA 231 Query: 604 ENDTLKQRIQQLVEIKENEQKDHTTKLEAFQKNNEQLQKLNVEVVQLKAHELELEEQNRH 663 E D ++Q +Q + ++ Q A + +Q ++ E QL A +LEE + Sbjct: 232 ERDQVQQELQTARQQSQSAQTQAENLQAALDRLGQQEEQWQGERSQLTAKLNQLEEAQKE 291 Query: 664 LKNCLEKKETGVEESLSDVKTLKQQVIVLKSEKQDITAEKLELQDNLESLEE 715 L + + +E + ++ LK + + Q + +LQ L +L+E Sbjct: 292 LALANAELKVKLETTQAEGDRLKTEKKEQAAALQSAQGQVTQLQQELAALQE 343 Score = 45.4 bits (106), Expect = 7e-07 Identities = 67/347 (19%), Positives = 139/347 (40%), Gaps = 39/347 (11%) Query: 306 LKRELDDCSGQLSEEKIKNSSLIQEMGKNREEMIKSIENFFSEDKAHHLLQFNKFEERVH 365 +K + G+ E I ++ + K+ + + S+EN +E + L + + +E++ Sbjct: 55 VKEVAPENDGESPEAVIHAKGKLRRLEKDLQSVQASLENALAE--RNQLTENYQAQEKMV 112 Query: 366 DLFEKKLQKHFDVAKDTLNVGLRNTTVEL---SSNTETMLKQQYEDIKEN---------- 412 + +L H+D + VGL+ EL ++N LKQ ++ E Sbjct: 113 AALQHQLA-HYDDIQSEKFVGLQKLNQELLQENTNLSDRLKQAVNEVAETRPKLVQLNSL 171 Query: 413 ------LEQKMSSSKDEMAKTINELSVTQKGLIMGVQEELLTSSGNIQTA--------LV 458 L ++S + AK I + +Q+ L E+ + N Q + L Sbjct: 172 VTRNQQLSDQLSYVEQNQAKAIEQRLASQEKLWQQRHEQE-QAQWNSQASQWEEQVRQLT 230 Query: 459 SEMNNTRQELLDDASQTAKNYASLENLVKAYKAEIVQSNEYEERIKHLESERSTLSSQKN 518 +E + +QEL Q+ ENL +A + + + EE+ + ERS L+++ N Sbjct: 231 AERDQVQQELQTARQQSQSAQTQAENL----QAALDRLGQQEEQ---WQGERSQLTAKLN 283 Query: 519 QIISSLGTKEAQYEDLVKKLEAKNIEISQISGKEQSLTEKNENLSNELKKVQDQLEKLNN 578 Q+ + +L KLE E ++ +++ ++ ++ ++Q +L L Sbjct: 284 QLEEAQKELALANAELKVKLETTQAEGDRLKTEKKEQAAALQSAQGQVTQLQQELAALQE 343 Query: 579 LNITTKSNYENKISSQNE-IVKALVSENDTLKQRIQQLVEIKENEQK 624 K +++ + + + A E + VE+K+ K Sbjct: 344 NLAKAKGEPPSEVPEKTKAVATAPAQEAPVVSPSPPVTVEVKQESPK 390 >SYNE-PCC-01-000943 sll1424 Length = 491 Score = 50.8 bits (120), Expect = 2e-08 Identities = 52/272 (19%), Positives = 122/272 (44%), Gaps = 34/272 (12%) Query: 388 RNTTVELSSNTETMLKQQYEDIKENLEQKMSSSKDEMAKTINELSVTQKGLIMGVQEELL 447 R T V L+ T T++ I + + ++ + +L V + L E+ Sbjct: 42 RQTAVLLTVITGTLISASTLGILFTFSKSLREGVFQLDDILAQLRVAKTEL-----EQAS 96 Query: 448 TSSGNIQTALVSEMNNTRQELLDDASQTAKNYASLENLVKAYKAEIVQSNEYEERIKHLE 507 + I++ L + + +Q + + + + +NY L++ QS + + +L Sbjct: 97 QAKEEIESELTA-VREEQQLVQERSRELNRNYTKALQLLRRVSE---QSRNLRQEVANLS 152 Query: 508 SERSTLSSQKNQIISSLGTKEAQYEDLVKKLEAKNIEISQISGKEQSLTEKNENLSNELK 567 +ER+ L+ QK+ +++ + E Q SQ+ ++Q L+++ E ++ + K Sbjct: 153 AERAQLNEQKDSLLAE--SSELQ---------------SQVKLRDQELSKRQERIAQQEK 195 Query: 568 KVQDQLEKLNNLNITTKSNYENKISSQNEIVKALVSENDTLKQRIQQLVEIKENEQKDHT 627 + Q E++ +L S + +Q + ++A +++ DT ++ Q + K+N+ + Sbjct: 196 VLARQREQVQSLEKRFAS-----LEAQRQQLQAEINQRDTKIDQLDQAIAAKDNDIQARE 250 Query: 628 TKLEAFQKNNEQLQKLNVEVVQLKAHELELEE 659 KL+ + LQ+ EV +L+ + + +E Sbjct: 251 EKLQGLETELSFLQR---EVEELERYYQDYQE 279 >MGEN-G37-01-000317 MG312 cytadherence accessory protein (hmw1) Length = 1139 Score = 48.1 bits (113), Expect = 1e-07 Identities = 104/572 (18%), Positives = 219/572 (38%), Gaps = 74/572 (12%) Query: 192 SNLKQELQKQQQDNAKLKVRLQSYASNSDKINEKVGKYKSCLETLQERIATLTSHKNNQE 251 SNL E K +N L SNS+ ++ V Y+S E + + ++N Sbjct: 395 SNLYSENNKDATNNDSLNSEFIQLNSNSETASDDV-HYESKSEPIHDYKFGSDLSQSNSN 453 Query: 252 TKLKDLRQNHQLYQRRISGFKTSIENLNKTINDLGKNKKEADAELMKKGKEIEYLKRELD 311 L+ + F++ E +++ D+ +N+ E L + + + K+ D Sbjct: 454 NSLESEPVKFNSETAPDAHFESQSEPVDQVQYDIYQNE-ELKPTLDQPSSDDYFAKQPTD 512 Query: 312 DCSGQLSE--EKIKNSSLIQEMGKNREEMIKSIENF-----FSEDKAHHLLQFNKFEERV 364 + G ++ ++K + + + + K E+ F D L ++ V Sbjct: 513 ENYGFDNDLPPEVKQPESVVDQPSSDDHFAKQPESTTDSYSFDSDLPQPTLDQPSLDDHV 572 Query: 365 HDLFEKKLQ-KHFDVAKDTLNVGLRNTTVELSSNTETMLKQQYEDIKENLEQKMSSSKDE 423 F+ + K ++ VG L +N E + E + + E K + D Sbjct: 573 QYNFDHHEELKPVAEEQNNYQVGFDQVQANLDNNEEIQPTAEKE-VTTDFESKQAQVVDS 631 Query: 424 MAKTINELSVTQKGLIMGVQEELLTSSGNIQTA-LVSEMNNTRQELLDDASQTAKNYASL 482 I+ Q++ T S + +T V + + E+ D L Sbjct: 632 YQLPIDT-----------DQQDQTTFSSSFETQPTVEQFDQVNSEVNDQFKPEITKEPVL 680 Query: 483 ENLVKAYKAEIVQSNEYEERIKHLESE---RSTLSSQKN--QIISSLGTKEAQYEDLVKK 537 E+ K ++V+++ Y ++ + + + T++++K+ QI ++L + Sbjct: 681 ESSFN--KQDVVETSNYTNNLQKFDIQSDNKITITTKKSSPQIPTTLPISFVS-----NR 733 Query: 538 LEAKNIEISQISGKEQ--------SLTEKNENLSNELKKVQDQLEKLNNLNITTKSNYE- 588 +E K +E + KE S+TE ++ L+ L Q+ LNN +I T + Sbjct: 734 IEYKPVETLALDNKESQQEQITINSITEDSKTLAKTLSVQLQQINSLNNQSIVTSESVRL 793 Query: 589 ---------NKISSQNE------IVKAL--VSENDTL--KQRIQQLVEIKENEQKDHTTK 629 N ++S+++ VKA V E+ KQ ++ E+ +K K Sbjct: 794 DKKDDQLTINTVNSEDQQPKIEVFVKAKEPVEEHSITQNKQSVEDKSELDNFNKKSDLYK 853 Query: 630 LEAFQKNNEQLQKLNVEVV-QLKAHELELEEQNRHLKNCLEKKETGVEESLSDVKTLKQQ 688 + + K E +N + + Q+ +++ +++ HL + + + + E + Sbjct: 854 IISELKRGELNPTINFDAIFQMNDYQMSVKQSFIHLNDFVTNYKNQISE----------R 903 Query: 689 VIVLKSEKQDITAEKLELQDNLESLEEVTKNL 720 +++K E Q + ++ +NL KNL Sbjct: 904 YLIIKKELQSELSRLIDQNENLNVQFNNAKNL 935 >SYNE-PCC-01-000727 sll1120 Length = 1200 Score = 46.2 bits (108), Expect = 4e-07 Identities = 51/253 (20%), Positives = 108/253 (42%), Gaps = 19/253 (7%) Query: 194 LKQELQKQQQDNAKLKVRLQSYASNSDKINEKVGKYKSCLETLQERIATLTSHKNNQETK 253 L QE ++ + A++ +Q+ + K++EK+G K + L+ ++ L S + Q+ + Sbjct: 877 LAQEQEQLKIALAEMNGAIQTTEAQLAKLSEKLGSTKQERDRLETQLNQLRSQQQEQQWQ 936 Query: 254 LKDLRQNHQLYQRRISGFKTSIENLNKTIND------LGKNKKEADAELMKKGKEIEYLK 307 + L+ N Q YQ ++ +T +E L + + D L +++ EA+ + +E L+ Sbjct: 937 WEKLQTNQQEYQENLTQLQTQLEALEQDLPDPWPEIPLLQDRDEANLDF---ANILEELE 993 Query: 308 RELDDCSGQLSEEKIKNSSLIQEMGKNREEMIKSIENF--FSEDKAHHLLQFNKFEERVH 365 R + + +L + N +QE K + + E + ++ LL+ Sbjct: 994 RSIRNGQKRLEAMEPVNMLALQEYEKTEARLGELSEKLQTIAGERTELLLRIEN------ 1047 Query: 366 DLFEKKLQKHFDVAKDTLNVGLRNTTVELSSNTETMLKQQYEDIKENLEQKMSSSKDEMA 425 F ++ F A D +N + ELS + ED ++ K + Sbjct: 1048 --FTTLRRRSFQDAFDAVNKNFQIIFAELSDGDGYLQLDDAEDPFNGGLNLVAHPKGKPV 1105 Query: 426 KTINELSVTQKGL 438 + ++ +S +K L Sbjct: 1106 RRLSSMSGGEKSL 1118 >MJAN-DSM-01-001277 MJ1254 hypothetical protein Length = 469 Score = 45.4 bits (106), Expect = 7e-07 Identities = 43/193 (22%), Positives = 89/193 (46%), Gaps = 34/193 (17%) Query: 541 KNI--EISQISGKEQSLTEKNENLSNELKKVQDQLEKLNNLNITTKSN------------ 586 KNI E++ + K + E+ +NL+ ++K ++D+L K N N+ K Sbjct: 283 KNIKNELTSLKNKLKEKEEEIKNLAIKIKDLEDKLSKANK-NLLNKDEIISVLNERISEY 341 Query: 587 -------------YENKISSQNEIVKALVSENDTLKQRIQQLVEIKENEQKDHTTKLEAF 633 Y+ KI S N+ ++ L END LK ++++L +I + ++ L +F Sbjct: 342 ESQIQKLLDENIIYKEKIESLNKYIETLKKENDKLKDKVRELSDIAKKYMEEKRGVLWSF 401 Query: 634 QKNNEQLQKLNVEVVQLKAHELELEEQNRHLKNCLEKKETGVEESLSDVKTLKQQVIVLK 693 +E K+ ++++ K H +++ + + K + + L D K ++++ I + Sbjct: 402 LTEDE---KIIIDLI--KKHGHITQKEIVEITGMSKPKVSRIISELEDRKIIRKEKIG-R 455 Query: 694 SEKQDITAEKLEL 706 K +T E +L Sbjct: 456 INKLTLTEESKKL 468 Score = 43.5 bits (101), Expect = 3e-06 Identities = 40/165 (24%), Positives = 83/165 (50%), Gaps = 21/165 (12%) Query: 464 TRQELLDDASQTAKNYASLENLVKAYKAEIVQSNEYEERIKHLESERSTLSSQ---KNQI 520 +++++++ SL+N +K + EI +IK LE + S + K++I Sbjct: 274 SKRKIIERTKNIKNELTSLKNKLKEKEEEI---KNLAIKIKDLEDKLSKANKNLLNKDEI 330 Query: 521 ISSLGTKEAQYEDLVKKLEAKNIEISQISGKEQSLTEKNENLSNELKKVQDQLEKLNNLN 580 IS L + ++YE ++KL +NI + K +SL + E L E K++D++ +L+++ Sbjct: 331 ISVLNERISEYESQIQKLLDENIIYKE---KIESLNKYIETLKKENDKLKDKVRELSDI- 386 Query: 581 ITTKSNYENK-------ISSQNEIVKALVSENDTLKQRIQQLVEI 618 K E K ++ +I+ L+ ++ + Q+ ++VEI Sbjct: 387 --AKKYMEEKRGVLWSFLTEDEKIIIDLIKKHGHITQK--EIVEI 427 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.305 0.123 0.316 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,508 Number of Sequences: 78 Number of extensions: 4717 Number of successful extensions: 235 Number of sequences better than 1.0e-05: 11 Number of HSP's better than 0.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 42 Number of HSP's gapped (non-prelim): 51 length of query: 875 length of database: 48,235 effective HSP length: 71 effective length of query: 804 effective length of database: 42,697 effective search space: 34328388 effective search space used: 34328388 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (21.9 bits) S2: 97 (42.0 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SCER-S28-01-001450 ORFP:YDR420W HKR1, Chr IV from 1306256-1311664 (1802 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SCER-S28-01-001450 ORFP:YDR420W HKR1, Chr IV from 1306256-1311664 1398 0.0 >SCER-S28-01-001450 ORFP:YDR420W HKR1, Chr IV from 1306256-1311664 Length = 1802 Score = 1398 bits (3619), Expect = 0.0 Identities = 739/1014 (72%), Positives = 739/1014 (72%) Query: 789 YDIVYSPSTFAAISSGYTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIATYEXXXXX 848 YDIVYSPSTFAAISSGYTP IATYE Sbjct: 789 YDIVYSPSTFAAISSGYTPSPSASVAMSSTSSSSPYDIVYSLSSSASRSSIATYEFSPSP 848 Query: 849 XXXXXXXXXXXXXXXXXXXXXXXXRYSTTSTIAPTQIHSTLSRITDFLLQTSMAXXXXXX 908 RYSTTSTIAPTQIHSTLSRITDFLLQTSMA Sbjct: 849 STSLPTSSTYTYFSSAYAFEFSSERYSTTSTIAPTQIHSTLSRITDFLLQTSMAIQSIVS 908 Query: 909 XXXXXXXXLNDEIHSSALSVFNPSASNLVETSLIISSTQASITSPKNSAKIXXXXXXXXX 968 LNDEIHSSALSVFNPSASNLVETSLIISSTQASITSPKNSAKI Sbjct: 909 QQISTSSTLNDEIHSSALSVFNPSASNLVETSLIISSTQASITSPKNSAKISSLQSQLSS 968 Query: 969 XTKNPYDTANKNTETSGRSTVVSNFLYTSSAAKPDNEKFXXXXXXXXXXXXXXXXXXXXX 1028 TKNPYDTANKNTETSGRSTVVSNFLYTSSAAKPDNEKF Sbjct: 969 STKNPYDTANKNTETSGRSTVVSNFLYTSSAAKPDNEKFSATPTEITTISSSSHAYSLSI 1028 Query: 1029 XXXHNSVTGLSHNFVDXXXXXXXXXXXXXXXXXXXXXXETIPASKSVSNTQERITSFTST 1088 HNSVTGLSHNFVD ETIPASKSVSNTQERITSFTST Sbjct: 1029 PSSHNSVTGLSHNFVDSSKSATSFGYSSSSISSIKLSKETIPASKSVSNTQERITSFTST 1088 Query: 1089 LRANSQSEKSEGRNSVGSLQSSHISSNPSLSTNTKVDSKSLSRKVSKXXXXXXXXXXXXX 1148 LRANSQSEKSEGRNSVGSLQSSHISSNPSLSTNTKVDSKSLSRKVSK Sbjct: 1089 LRANSQSEKSEGRNSVGSLQSSHISSNPSLSTNTKVDSKSLSRKVSKTMGENGEETGLTT 1148 Query: 1149 XXXQYKXXXXXXXXXXXXFTKISIGPATTAVQTQASTNSVFXXXXXXXXXXXXXXXXXXX 1208 QYK FTKISIGPATTAVQTQASTNSVF Sbjct: 1149 TKTQYKSSSETSGSYSRSFTKISIGPATTAVQTQASTNSVFTAPALSTYPTTPYPSPNSY 1208 Query: 1209 XWLPTAIIVESSETGPTTASFNPSITGSLPNAIEPAVAVSEPINHTLITIGFTAALNYVF 1268 WLPTAIIVESSETGPTTASFNPSITGSLPNAIEPAVAVSEPINHTLITIGFTAALNYVF Sbjct: 1209 AWLPTAIIVESSETGPTTASFNPSITGSLPNAIEPAVAVSEPINHTLITIGFTAALNYVF 1268 Query: 1269 LVQNPLSSAQIFNFLPLVLKYPFSNTSSELDNSIGELSTFILSYRSGXXXXXXXXXXXXX 1328 LVQNPLSSAQIFNFLPLVLKYPFSNTSSELDNSIGELSTFILSYRSG Sbjct: 1269 LVQNPLSSAQIFNFLPLVLKYPFSNTSSELDNSIGELSTFILSYRSGSSTTTLSPKSISS 1328 Query: 1329 XXXXXXXXXXXXXXXXXXXEDLHPPQVDTSSIAVKKIVPMVDSSKAYIVSVAEVYFPTEA 1388 EDLHPPQVDTSSIAVKKIVPMVDSSKAYIVSVAEVYFPTEA Sbjct: 1329 LSVVKKKKNQQKKNATKSTEDLHPPQVDTSSIAVKKIVPMVDSSKAYIVSVAEVYFPTEA 1388 Query: 1389 VTYLQQLILDENSTLYSNPQTPLRSLAGLIDSGIPXXXXXXXXXXXXXYVPXXXXXXXXX 1448 VTYLQQLILDENSTLYSNPQTPLRSLAGLIDSGIP YVP Sbjct: 1389 VTYLQQLILDENSTLYSNPQTPLRSLAGLIDSGIPLGGLTLYGSGDGGYVPSLTSSSVLD 1448 Query: 1449 XXKGNSQNIDGTYKYGALDDFINSFTDSASAGKYAVKIIIFLIVLTIGXXXXXXXXXXXX 1508 KGNSQNIDGTYKYGALDDFINSFTDSASAGKYAVKIIIFLIVLTIG Sbjct: 1449 SSKGNSQNIDGTYKYGALDDFINSFTDSASAGKYAVKIIIFLIVLTIGVLLWLFVAFFAF 1508 Query: 1509 RHRNILLKRHPRNCIGKXXXXXXXXXXXXXXXXXXGNQVYNEKPPESENESVYSAVDDHY 1568 RHRNILLKRHPRNCIGK GNQVYNEKPPESENESVYSAVDDHY Sbjct: 1509 RHRNILLKRHPRNCIGKSLNNERELESTELSRSSSGNQVYNEKPPESENESVYSAVDDHY 1568 Query: 1569 IVTGENTVYNTIHRLHYTINDDGDLLYRDAIPLDFDQTNGDDGSGIDSIVRDCVYDKNQD 1628 IVTGENTVYNTIHRLHYTINDDGDLLYRDAIPLDFDQTNGDDGSGIDSIVRDCVYDKNQD Sbjct: 1569 IVTGENTVYNTIHRLHYTINDDGDLLYRDAIPLDFDQTNGDDGSGIDSIVRDCVYDKNQD 1628 Query: 1629 ATEAFLNDEESISGILDVDENGDIRLYDSYSDNEESNSFHLPDEVIENYNKNHLCETKLH 1688 ATEAFLNDEESISGILDVDENGDIRLYDSYSDNEESNSFHLPDEVIENYNKNHLCETKLH Sbjct: 1629 ATEAFLNDEESISGILDVDENGDIRLYDSYSDNEESNSFHLPDEVIENYNKNHLCETKLH 1688 Query: 1689 GLGTESCTTDDPDTGNQITNEFSTGSQTCLPSTAYTTPLHTNSIKLHTLRYTESSLPKPN 1748 GLGTESCTTDDPDTGNQITNEFSTGSQTCLPSTAYTTPLHTNSIKLHTLRYTESSLPKPN Sbjct: 1689 GLGTESCTTDDPDTGNQITNEFSTGSQTCLPSTAYTTPLHTNSIKLHTLRYTESSLPKPN 1748 Query: 1749 QTLFSNXXXXXXXXXXXNGSVSDVHIEELDALDEELYKRMSKVIKQQNHQTTKI 1802 QTLFSN NGSVSDVHIEELDALDEELYKRMSKVIKQQNHQTTKI Sbjct: 1749 QTLFSNLEDLEIEDIDDNGSVSDVHIEELDALDEELYKRMSKVIKQQNHQTTKI 1802 Score = 461 bits (1185), Expect = e-131 Identities = 252/435 (57%), Positives = 252/435 (57%) Query: 17 NAIEAYSNDTIYSTSYNNGIEXXXXXXXXXXXXXXXXNKENAITSSSETTTMAGQYGESG 76 NAIEAYSNDTIYSTSYNNGIE NKENAITSSSETTTMAGQYGESG Sbjct: 17 NAIEAYSNDTIYSTSYNNGIESTPSYSTSAISSTGSSNKENAITSSSETTTMAGQYGESG 76 Query: 77 STTIMDEQETGXXXXXXXXXXXXXXXXXXXXVKKSTEIATPSSSIVPTPLQSYSDESQIS 136 STTIMDEQETG VKKSTEIATPSSSIVPTPLQSYSDESQIS Sbjct: 77 STTIMDEQETGTSSQYISVTTTTQTSDTMSSVKKSTEIATPSSSIVPTPLQSYSDESQIS 136 Query: 137 QTLSHNPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXPREISPIITTDSQISKEEGTLAQT 196 QTLSHNPK PREISPIITTDSQISKEEGTLAQT Sbjct: 137 QTLSHNPKSVAESDSDTTSSESSSSVIISTSDSSAVPREISPIITTDSQISKEEGTLAQT 196 Query: 197 SSISETTRIAQMVTRVSQXXXXXXXXXXDGFSSESTQTDFSNTVSFENSVEEEYAMXXXX 256 SSISETTRIAQMVTRVSQ DGFSSESTQTDFSNTVSFENSVEEEYAM Sbjct: 197 SSISETTRIAQMVTRVSQISSITAASTIDGFSSESTQTDFSNTVSFENSVEEEYAMSKSQ 256 Query: 257 XXXXXXXXXXXXXXXXXXADKXXXXXXXXXXXXXXXXXXXXXXXXXRVAVGVSRPSSITQ 316 ADK RVAVGVSRPSSITQ Sbjct: 257 LSESYSSSSTVYSGGESTADKTSSSPITSFSSSYSQTTSTETSESSRVAVGVSRPSSITQ 316 Query: 317 TTSIDSFSMSEVELSTYYDLSAGNYPDQELIVDRPXXXXXXXXXXXXXQGVSRESNTFAV 376 TTSIDSFSMSEVELSTYYDLSAGNYPDQELIVDRP QGVSRESNTFAV Sbjct: 317 TTSIDSFSMSEVELSTYYDLSAGNYPDQELIVDRPATSSTAETSSEASQGVSRESNTFAV 376 Query: 377 SSISTTNFIXXXXXXXXXXXXXXXXXXXXXXHSTFXXXXXXXXXXXXXXXXXXXXXXXXX 436 SSISTTNFI HSTF Sbjct: 377 SSISTTNFIVSSASDTVVSTSSTNTVPYSSVHSTFVHATSSSTYISSSLYSSPSLSASVS 436 Query: 437 XXFGVAPFPSAYISF 451 FGVAPFPSAYISF Sbjct: 437 SHFGVAPFPSAYISF 451 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.308 0.125 0.339 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,857 Number of Sequences: 78 Number of extensions: 3219 Number of successful extensions: 13 Number of sequences better than 1.0e-05: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 7 Number of HSP's gapped (non-prelim): 2 length of query: 1802 length of database: 48,235 effective HSP length: 76 effective length of query: 1726 effective length of database: 42,307 effective search space: 73021882 effective search space used: 73021882 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 99 (42.7 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SCER-S28-01-001667 ORFP:YER008C SEC3, Chr V from 167807-171817, reverse complement (1336 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SCER-S28-01-001667 ORFP:YER008C SEC3, Chr V from 167807-171817,... 2375 0.0 >SCER-S28-01-001667 ORFP:YER008C SEC3, Chr V from 167807-171817, reverse complement Length = 1336 Score = 2375 bits (6154), Expect = 0.0 Identities = 1221/1336 (91%), Positives = 1221/1336 (91%) Query: 1 MRSSKSPFKRKSHSRETSHDENTSFFHKRTISGSSAHHSRNVSQGAVPSSAPPVSGGNYS 60 MRSSKSPFKRKSHSRETSHDENTSFFHKRTISGSSAHHSRNVSQGAVPSSAPPVSGGNYS Sbjct: 1 MRSSKSPFKRKSHSRETSHDENTSFFHKRTISGSSAHHSRNVSQGAVPSSAPPVSGGNYS 60 Query: 61 HKRNVSRASNSSQTSNFLAEQYERDRKAIINCCFSRPDHKTGEPPNNYITHVRIIEDSKF 120 HKRNVSRASNSSQTSNFLAEQYERDRKAIINCCFSRPDHKTGEPPNNYITHVRIIEDSKF Sbjct: 61 HKRNVSRASNSSQTSNFLAEQYERDRKAIINCCFSRPDHKTGEPPNNYITHVRIIEDSKF 120 Query: 121 PSSRPPPDSKLENKKKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRTWQLTELVRVEK 180 PSSRPPPDSKLENKKKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRTWQLTELVRVEK Sbjct: 121 PSSRPPPDSKLENKKKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRTWQLTELVRVEK 180 Query: 181 DLEISEGFILTMSKKYYWETNSAKERTVFIKSLITLYIQTFEGHVPELVNWDLSLFYLDE 240 DLEISEGFILTMSKKYYWETNSAKERTVFIKSLITLYIQTFEGHVPELVNWDLSLFYLDE Sbjct: 181 DLEISEGFILTMSKKYYWETNSAKERTVFIKSLITLYIQTFEGHVPELVNWDLSLFYLDE 240 Query: 241 RSYQRAVITNRPGSVSPIKSPTSNFTTNTTQSVGSVPFSAPTERTRRSETESVNPVSTPA 300 RSYQRAVITNRPGSVSPIKSPTSNFTTNTTQSVGSVPFSAPTERTRRSETESVNPVSTPA Sbjct: 241 RSYQRAVITNRPGSVSPIKSPTSNFTTNTTQSVGSVPFSAPTERTRRSETESVNPVSTPA 300 Query: 301 SVEYHAGMKSLNKAPYSSNSTLNEVNKRYXXXXXXXXXXXXXXXXXXXXXXXXXXXNEMX 360 SVEYHAGMKSLNKAPYSSNSTLNEVNKRY NEM Sbjct: 301 SVEYHAGMKSLNKAPYSSNSTLNEVNKRYELEQQQQQEEAELRRLEEQKRLQLQKENEMK 360 Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKQMXXXXXXXXXXXXXXXXXX 420 AKKQM Sbjct: 361 RLEEERRIKQEERKRQMELEHQRQLEEEERKRQMELEAKKQMELKRQRQFEEEQRLKKER 420 Query: 421 XXXXXXXXQREQETAXXXXXXXXXXXXXXXXXXXXXXXXVDNESYTQEINGKVDNLLEDL 480 QREQETA VDNESYTQEINGKVDNLLEDL Sbjct: 421 ELLEIQRKQREQETAERLKKEEQEALAKKEEEEKSKRNKVDNESYTQEINGKVDNLLEDL 480 Query: 481 NAVLAEETETTPTMQNGTYVPERSTARAHDQLKKPLNIAKVESLGGSDLNDSISLSDEIA 540 NAVLAEETETTPTMQNGTYVPERSTARAHDQLKKPLNIAKVESLGGSDLNDSISLSDEIA Sbjct: 481 NAVLAEETETTPTMQNGTYVPERSTARAHDQLKKPLNIAKVESLGGSDLNDSISLSDEIA 540 Query: 541 GLNTSNLSGEDQDEKNDLSFEKGDEVRYSNNFEGEAPHVYHEVSIIQEEAPAVSQKLILP 600 GLNTSNLSGEDQDEKNDLSFEKGDEVRYSNNFEGEAPHVYHEVSIIQEEAPAVSQKLILP Sbjct: 541 GLNTSNLSGEDQDEKNDLSFEKGDEVRYSNNFEGEAPHVYHEVSIIQEEAPAVSQKLILP 600 Query: 601 EENNESEALIESKEEIKTMENIDDEVLLEILTDINWSIEDDADSMIERIDLRLAETEYLF 660 EENNESEALIESKEEIKTMENIDDEVLLEILTDINWSIEDDADSMIERIDLRLAETEYLF Sbjct: 601 EENNESEALIESKEEIKTMENIDDEVLLEILTDINWSIEDDADSMIERIDLRLAETEYLF 660 Query: 661 NQNLLSLQKIGPNIRPYEDKVNDECHRIIPTLSLFLMEMSNFSNDIENVESQDNGLQVES 720 NQNLLSLQKIGPNIRPYEDKVNDECHRIIPTLSLFLMEMSNFSNDIENVESQDNGLQVES Sbjct: 661 NQNLLSLQKIGPNIRPYEDKVNDECHRIIPTLSLFLMEMSNFSNDIENVESQDNGLQVES 720 Query: 721 ANKKLLWNTLDELLKTVSLDEISLNQLLECPIREKNLPWMENQLNLLLKAFQAIGSDGNE 780 ANKKLLWNTLDELLKTVSLDEISLNQLLECPIREKNLPWMENQLNLLLKAFQAIGSDGNE Sbjct: 721 ANKKLLWNTLDELLKTVSLDEISLNQLLECPIREKNLPWMENQLNLLLKAFQAIGSDGNE 780 Query: 781 VEYNLREISGLKQRLQFYEKVTKIFLNRIVEEMQKKFSNIRGQDISHDQMIRILTTLLIF 840 VEYNLREISGLKQRLQFYEKVTKIFLNRIVEEMQKKFSNIRGQDISHDQMIRILTTLLIF Sbjct: 781 VEYNLREISGLKQRLQFYEKVTKIFLNRIVEEMQKKFSNIRGQDISHDQMIRILTTLLIF 840 Query: 841 SPLILFCKEISQKSYQAIVENWNVSIQPVYMELWTKKISQLQGIDTNDEKMNELSLSQLL 900 SPLILFCKEISQKSYQAIVENWNVSIQPVYMELWTKKISQLQGIDTNDEKMNELSLSQLL Sbjct: 841 SPLILFCKEISQKSYQAIVENWNVSIQPVYMELWTKKISQLQGIDTNDEKMNELSLSQLL 900 Query: 901 NEWDTFRKERKTNDINPVFKNSFSLLTECLQTMRQECIVYQNFVEVFFHISSKHNFEEYI 960 NEWDTFRKERKTNDINPVFKNSFSLLTECLQTMRQECIVYQNFVEVFFHISSKHNFEEYI Sbjct: 901 NEWDTFRKERKTNDINPVFKNSFSLLTECLQTMRQECIVYQNFVEVFFHISSKHNFEEYI 960 Query: 961 KHFNDPDAPPILLDTVKVMQSDREAAVIETQLVSRIFQPIVTRLSSYFVELVKAEPTVAP 1020 KHFNDPDAPPILLDTVKVMQSDREAAVIETQLVSRIFQPIVTRLSSYFVELVKAEPTVAP Sbjct: 961 KHFNDPDAPPILLDTVKVMQSDREAAVIETQLVSRIFQPIVTRLSSYFVELVKAEPTVAP 1020 Query: 1021 ALTFYLENEIKSLESSNHEFLLSAVTRMYTQIKQVWSDNVEEQVLHFERISNATTNGEIL 1080 ALTFYLENEIKSLESSNHEFLLSAVTRMYTQIKQVWSDNVEEQVLHFERISNATTNGEIL Sbjct: 1021 ALTFYLENEIKSLESSNHEFLLSAVTRMYTQIKQVWSDNVEEQVLHFERISNATTNGEIL 1080 Query: 1081 PGILDLPVGLKNSEDLFQFAKRSMDIKDTDEGYESIELMNSSFRKLSIAATRSITHKEVN 1140 PGILDLPVGLKNSEDLFQFAKRSMDIKDTDEGYESIELMNSSFRKLSIAATRSITHKEVN Sbjct: 1081 PGILDLPVGLKNSEDLFQFAKRSMDIKDTDEGYESIELMNSSFRKLSIAATRSITHKEVN 1140 Query: 1141 SSINPNLSDTAALNNDYMETISLLVNSNWLTEMLSMLNFNKDGIFDTSLQNVKKVFDVEK 1200 SSINPNLSDTAALNNDYMETISLLVNSNWLTEMLSMLNFNKDGIFDTSLQNVKKVFDVEK Sbjct: 1141 SSINPNLSDTAALNNDYMETISLLVNSNWLTEMLSMLNFNKDGIFDTSLQNVKKVFDVEK 1200 Query: 1201 ESYASFLLRDTMPKLTAFVYGVSNIIENTNNVNMTNPSRWAAYSRQNLENILLAYTSHEI 1260 ESYASFLLRDTMPKLTAFVYGVSNIIENTNNVNMTNPSRWAAYSRQNLENILLAYTSHEI Sbjct: 1201 ESYASFLLRDTMPKLTAFVYGVSNIIENTNNVNMTNPSRWAAYSRQNLENILLAYTSHEI 1260 Query: 1261 ETLVKRLHTHMVNDFGYHQENAINNVLCDKLWSCIQGQTVSLYLKLYTVIDKHYRGTNIR 1320 ETLVKRLHTHMVNDFGYHQENAINNVLCDKLWSCIQGQTVSLYLKLYTVIDKHYRGTNIR Sbjct: 1261 ETLVKRLHTHMVNDFGYHQENAINNVLCDKLWSCIQGQTVSLYLKLYTVIDKHYRGTNIR 1320 Query: 1321 FTKNDIISAFEEYKNA 1336 FTKNDIISAFEEYKNA Sbjct: 1321 FTKNDIISAFEEYKNA 1336 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.313 0.130 0.362 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 123,763 Number of Sequences: 78 Number of extensions: 6076 Number of successful extensions: 34 Number of sequences better than 1.0e-05: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 30 Number of HSP's gapped (non-prelim): 2 length of query: 1336 length of database: 48,235 effective HSP length: 74 effective length of query: 1262 effective length of database: 42,463 effective search space: 53588306 effective search space used: 53588306 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 98 (42.4 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SCER-S28-01-002073 ORFP:YGL073W HSF1, Chr VII from 368751-371252 (833 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SCER-S28-01-002073 ORFP:YGL073W HSF1, Chr VII from 368751-371252 1333 0.0 SCER-S28-01-002525 ORFP:YGR249W MGA1, Chr VII from 988045-989415 52 7e-09 >SCER-S28-01-002073 ORFP:YGL073W HSF1, Chr VII from 368751-371252 Length = 833 Score = 1333 bits (3451), Expect = 0.0 Identities = 674/833 (80%), Positives = 674/833 (80%) Query: 1 MNNAANTGTTNESNVSDAPRIEPLPSLNDDDIEKILQPNDIFXXXXXXXXXXXXXXXXXX 60 MNNAANTGTTNESNVSDAPRIEPLPSLNDDDIEKILQPNDIF Sbjct: 1 MNNAANTGTTNESNVSDAPRIEPLPSLNDDDIEKILQPNDIFTTDRTDASTTSSTAIEDI 60 Query: 61 XNPSLDPQXXXXXXXXXXXXHDSRKPSTSTHLVRRGTPLGIYQTNLYGHNSRENTNPNST 120 NPSLDPQ HDSRKPSTSTHLVRRGTPLGIYQTNLYGHNSRENTNPNST Sbjct: 61 INPSLDPQSAASPVPSSSFFHDSRKPSTSTHLVRRGTPLGIYQTNLYGHNSRENTNPNST 120 Query: 121 LLSSKLLAHPPVPYGQNPDLLQHAVYRAQPSSGTTNAQPRQTTRRYQSHKSRPAFVNKLW 180 LLSSKLLAHPPVPYGQNPDLLQHAVYRAQPSSGTTNAQPRQTTRRYQSHKSRPAFVNKLW Sbjct: 121 LLSSKLLAHPPVPYGQNPDLLQHAVYRAQPSSGTTNAQPRQTTRRYQSHKSRPAFVNKLW 180 Query: 181 SMLNDDSNTKLIQWAEDGKSFIVTNREEFVHQILPKYFKHSNFASFVRQLNMYGWHKVQD 240 SMLNDDSNTKLIQWAEDGKSFIVTNREEFVHQILPKYFKHSNFASFVRQLNMYGWHKVQD Sbjct: 181 SMLNDDSNTKLIQWAEDGKSFIVTNREEFVHQILPKYFKHSNFASFVRQLNMYGWHKVQD 240 Query: 241 VKSGSIQSSSDDKWQFENENFIRGREDLLEKIIRQKXXXXXXXXXXXXXXXXXXXXIPLD 300 VKSGSIQSSSDDKWQFENENFIRGREDLLEKIIRQK IPLD Sbjct: 241 VKSGSIQSSSDDKWQFENENFIRGREDLLEKIIRQKGSSNNHNSPSGNGNPANGSNIPLD 300 Query: 301 NAAGXXXXXXXXXXXXXXXXXGHLLQGKTLRLMNEANLGDKNDVTAILGELEQIKYNQIA 360 NAAG GHLLQGKTLRLMNEANLGDKNDVTAILGELEQIKYNQIA Sbjct: 301 NAAGSNNSNNNISSSNSFFNNGHLLQGKTLRLMNEANLGDKNDVTAILGELEQIKYNQIA 360 Query: 361 ISKDLLRINKDNELLWQENMMARERHRTQQQALEKMFRFLTSIVPHLDPKMIMDGLGDPK 420 ISKDLLRINKDNELLWQENMMARERHRTQQQALEKMFRFLTSIVPHLDPKMIMDGLGDPK Sbjct: 361 ISKDLLRINKDNELLWQENMMARERHRTQQQALEKMFRFLTSIVPHLDPKMIMDGLGDPK 420 Query: 421 VNNEKLNSANNIGLNRDNTGTIDELKSNDSFINDDRNSFTNATTNARNNMSPNNDDNSID 480 VNNEKLNSANNIGLNRDNTGTIDELKSNDSFINDDRNSFTNATTNARNNMSPNNDDNSID Sbjct: 421 VNNEKLNSANNIGLNRDNTGTIDELKSNDSFINDDRNSFTNATTNARNNMSPNNDDNSID 480 Query: 481 TASTNTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPIRPYKQRYLLK 540 TASTNTT GSPIRPYKQRYLLK Sbjct: 481 TASTNTTNRKKNIDENIKNNNDIINDIIFNTNLANNLSNYNSNNNAGSPIRPYKQRYLLK 540 Query: 541 NRANSSTSSENPSLTPFDIESNNDRKISEIPFXXXXXXXTDFRPFTSRDPNNQTSENTFD 600 NRANSSTSSENPSLTPFDIESNNDRKISEIPF TDFRPFTSRDPNNQTSENTFD Sbjct: 541 NRANSSTSSENPSLTPFDIESNNDRKISEIPFDDEEEEETDFRPFTSRDPNNQTSENTFD 600 Query: 601 PNRFTMLSDDDLKKDSHTNDNKHNESDLFWDNVHRNIDEQDARLQNLENMVHILSPGYPX 660 PNRFTMLSDDDLKKDSHTNDNKHNESDLFWDNVHRNIDEQDARLQNLENMVHILSPGYP Sbjct: 601 PNRFTMLSDDDLKKDSHTNDNKHNESDLFWDNVHRNIDEQDARLQNLENMVHILSPGYPN 660 Query: 661 XXXXXXXXXXXXXXXMESAVNVNSPGFNLQDYLTGEXXXXXXXXXXXXXXXXXTPLPMPN 720 MESAVNVNSPGFNLQDYLTGE TPLPMPN Sbjct: 661 KSFNNKTSSTNTNSNMESAVNVNSPGFNLQDYLTGESNSPNSVHSVPSNGSGSTPLPMPN 720 Query: 721 DNDTEHASTSVNQGENGSGLTPFLTVDDHTLNDNNTSEGSTRVSPDIKFSATENTKVSDN 780 DNDTEHASTSVNQGENGSGLTPFLTVDDHTLNDNNTSEGSTRVSPDIKFSATENTKVSDN Sbjct: 721 DNDTEHASTSVNQGENGSGLTPFLTVDDHTLNDNNTSEGSTRVSPDIKFSATENTKVSDN 780 Query: 781 LPSFNDHSYSTQADTAPENAKKRFXXXXXXXXXXXXQDPTEYNDHRLPKRAKK 833 LPSFNDHSYSTQADTAPENAKKRF QDPTEYNDHRLPKRAKK Sbjct: 781 LPSFNDHSYSTQADTAPENAKKRFVEEIPEPAIVEIQDPTEYNDHRLPKRAKK 833 >SCER-S28-01-002525 ORFP:YGR249W MGA1, Chr VII from 988045-989415 Length = 456 Score = 52.0 bits (123), Expect = 7e-09 Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 14/113 (12%) Query: 175 FVNKLWSMLNDDSNTKLIQWAEDGKS--FIVTNREEFVHQILPKYFKHSNFASFVRQLNM 232 FV++L ++L + K I W+ + F+ F +L +YFKH N SFVRQL+M Sbjct: 6 FVHQLHAILLEPEVNKWIYWSPTDNTVFFLKPYDPNFSTHVLKRYFKHGNVNSFVRQLHM 65 Query: 233 YGWHKVQDVKSGSIQSSSDD-------KWQFENEN---FIRGREDLLEKIIRQ 275 YG+HK+ QSS+++ +W+F + + F +L KI R+ Sbjct: 66 YGFHKLSHPSPD--QSSANNGNVKELVEWKFTHPSGFFFKEANAGILNKIQRK 116 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.310 0.129 0.369 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,595 Number of Sequences: 78 Number of extensions: 3704 Number of successful extensions: 109 Number of sequences better than 1.0e-05: 2 Number of HSP's better than 0.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 102 Number of HSP's gapped (non-prelim): 2 length of query: 833 length of database: 48,235 effective HSP length: 70 effective length of query: 763 effective length of database: 42,775 effective search space: 32637325 effective search space used: 32637325 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 96 (41.6 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SCER-S28-01-002137 ORFP:YGL137W SEC27, Chr VII from 249872-249889,250090-252741 (889 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SCER-S28-01-002137 ORFP:YGL137W SEC27, Chr VII from 249872-2498... 1731 0.0 >SCER-S28-01-002137 ORFP:YGL137W SEC27, Chr VII from 249872-249889,250090-252741 Length = 889 Score = 1731 bits (4483), Expect = 0.0 Identities = 858/889 (96%), Positives = 858/889 (96%) Query: 1 MKLDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRA 60 MKLDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRA Sbjct: 1 MKLDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRA 60 Query: 61 GKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLT 120 GKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLT Sbjct: 61 GKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLT 120 Query: 121 VKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLT 180 VKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLT Sbjct: 121 VKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLT 180 Query: 181 TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTL 240 TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTL Sbjct: 181 TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTL 240 Query: 241 PIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSL 300 PIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSL Sbjct: 241 PIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSL 300 Query: 301 GNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQ 360 GNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQ Sbjct: 301 GNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQ 360 Query: 361 SLAHSPNGRFVTVVGDGEYVIYTALAWRNKAFGKCQDFVWGPDSNSYALIDETGQIKYYK 420 SLAHSPNGRFVTVVGDGEYVIYTALAWRNKAFGKCQDFVWGPDSNSYALIDETGQIKYYK Sbjct: 361 SLAHSPNGRFVTVVGDGEYVIYTALAWRNKAFGKCQDFVWGPDSNSYALIDETGQIKYYK 420 Query: 421 NFKEVTSWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRRIDVNAKDVIWSDNG 480 NFKEVTSWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRRIDVNAKDVIWSDNG Sbjct: 421 NFKEVTSWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRRIDVNAKDVIWSDNG 480 Query: 481 ELVMIVNTNSNGDEASGYTLLFNKDAYLEAANNGNIDDSEGVDEAFDVLYELSESITSGK 540 ELVMIVNTNSNGDEASGYTLLFNKDAYLEAANNGNIDDSEGVDEAFDVLYELSESITSGK Sbjct: 481 ELVMIVNTNSNGDEASGYTLLFNKDAYLEAANNGNIDDSEGVDEAFDVLYELSESITSGK 540 Query: 541 WVGDVFIFTTATNRLNYFVGGKTYNLAHYTKEMYLLGYLARDNKVYLADREVHVYGYEIS 600 WVGDVFIFTTATNRLNYFVGGKTYNLAHYTKEMYLLGYLARDNKVYLADREVHVYGYEIS Sbjct: 541 WVGDVFIFTTATNRLNYFVGGKTYNLAHYTKEMYLLGYLARDNKVYLADREVHVYGYEIS 600 Query: 601 LEVLEFQTLTLRGEIEEAIENVLPNVEGKDSLTKIARFLEGQEYYEEALNISPDQDQKFE 660 LEVLEFQTLTLRGEIEEAIENVLPNVEGKDSLTKIARFLEGQEYYEEALNISPDQDQKFE Sbjct: 601 LEVLEFQTLTLRGEIEEAIENVLPNVEGKDSLTKIARFLEGQEYYEEALNISPDQDQKFE 660 Query: 661 LALKVGQLTLARDLLTDESAEMKWRALGDASLQRFNFKLAVEAFTNAHDLESLFLLHSSF 720 LALKVGQLTLARDLLTDESAEMKWRALGDASLQRFNFKLAVEAFTNAHDLESLFLLHSSF Sbjct: 661 LALKVGQLTLARDLLTDESAEMKWRALGDASLQRFNFKLAVEAFTNAHDLESLFLLHSSF 720 Query: 721 NNKEGLVTLAKDAERAGKFNLAFNAYWIAGDIQGAKDLLIKSQRFSEAAFLGSTYGLGDD 780 NNKEGLVTLAKDAERAGKFNLAFNAYWIAGDIQGAKDLLIKSQRFSEAAFLGSTYGLGDD Sbjct: 721 NNKEGLVTLAKDAERAGKFNLAFNAYWIAGDIQGAKDLLIKSQRFSEAAFLGSTYGLGDD 780 Query: 781 AVNDIVTKWKENLILNGKNTVSERVCGAEGLPGSSSSGDAQPLIDLDSTPAPEQADENKE 840 AVNDIVTKWKENLILNGKNTVSERVCGAEGLPGSSSSGDAQPLIDLDSTPAPEQADENKE Sbjct: 781 AVNDIVTKWKENLILNGKNTVSERVCGAEGLPGSSSSGDAQPLIDLDSTPAPEQADENKE 840 Query: 841 AEVEDSEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPEPVEEES 889 AEVEDSEF AVPEPVEEES Sbjct: 841 AEVEDSEFKESNSEAVEAEKKEEEAPQQQQSEQQPEQGEAVPEPVEEES 889 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.316 0.134 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,470 Number of Sequences: 78 Number of extensions: 3899 Number of successful extensions: 37 Number of sequences better than 1.0e-05: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 17 Number of HSP's gapped (non-prelim): 1 length of query: 889 length of database: 48,235 effective HSP length: 71 effective length of query: 818 effective length of database: 42,697 effective search space: 34926146 effective search space used: 34926146 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 97 (42.0 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SCER-S28-01-002414 ORFP:YGR142W BTN2, Chr VII from 772449-773681 (410 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SCER-S28-01-002414 ORFP:YGR142W BTN2, Chr VII from 772449-773681 627 0.0 >SCER-S28-01-002414 ORFP:YGR142W BTN2, Chr VII from 772449-773681 Length = 410 Score = 627 bits (1617), Expect = 0.0 Identities = 325/410 (79%), Positives = 325/410 (79%) Query: 1 MFSIFNSPCVFEQLPSFSQPLHSRYFDCSSPVSYYPECKRRKAIKANLRAPKKSDANCSE 60 MFSIFNSPCVFEQLPSFSQPLHSRYFDCSSPVSYYPECKRRKAIKANLRAPKKSDANCSE Sbjct: 1 MFSIFNSPCVFEQLPSFSQPLHSRYFDCSSPVSYYPECKRRKAIKANLRAPKKSDANCSE 60 Query: 61 PLRYALAETPNGYTLSLSKRIPYELFSKYVNEKLGELKENHYRPTYHVVQDFFGNQYYVE 120 PLRYALAETPNGYTLSLSKRIPYELFSKYVNEKLGELKENHYRPTYHVVQDFFGNQYYVE Sbjct: 61 PLRYALAETPNGYTLSLSKRIPYELFSKYVNEKLGELKENHYRPTYHVVQDFFGNQYYVE 120 Query: 121 DEADEDALLRSALKDLDFRAIGKKIAKDLFQDYEIELNHRGDELSILSKKDKIFKEFSLD 180 DEADEDALLRSALKDLDFRAIGKKIAKDLFQDYEIELNHRGDELSILSKKDKIFKEFSLD Sbjct: 121 DEADEDALLRSALKDLDFRAIGKKIAKDLFQDYEIELNHRGDELSILSKKDKIFKEFSLD 180 Query: 181 QVFEDVFVIGCGVENIDDGSREKYALLKIGLVKHEEEISEGGINEPKMPIIESKIDESHD 240 QVFEDVFVIGCGVENIDDGSREKYALLKIGLVKHEEEISEGGINEPKMPIIESKIDESHD Sbjct: 181 QVFEDVFVIGCGVENIDDGSREKYALLKIGLVKHEEEISEGGINEPKMPIIESKIDESHD 240 Query: 241 DVNMXXXXXXXXXXXXXXXXXXXDQIKKWIEEERLMQEESRXXXXXXXXXXXXXXXXXXX 300 DVNM DQIKKWIEEERLMQEESR Sbjct: 241 DVNMSESLKEEEAEKAKEPLTKEDQIKKWIEEERLMQEESRKSEQEKAAKEDEERQKKEK 300 Query: 301 XXXXXXXXXSLINKQKTKRSQQKKLQNSKSLPIXXXXXXXXXXXXXXXXXXXXXXXXXXX 360 SLINKQKTKRSQQKKLQNSKSLPI Sbjct: 301 EARLKARKESLINKQKTKRSQQKKLQNSKSLPISEIEASNKNNNSNSGSAESDNESINSD 360 Query: 361 XXTTLDFSVSGNTLKKHASPLLXXXXXXXXXRYNESLSRSPKGNSIIEEI 410 TTLDFSVSGNTLKKHASPLL RYNESLSRSPKGNSIIEEI Sbjct: 361 SDTTLDFSVSGNTLKKHASPLLEDVEDEEVDRYNESLSRSPKGNSIIEEI 410 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.314 0.134 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,898 Number of Sequences: 78 Number of extensions: 1393 Number of successful extensions: 6 Number of sequences better than 1.0e-05: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 3 Number of HSP's gapped (non-prelim): 1 length of query: 410 length of database: 48,235 effective HSP length: 65 effective length of query: 345 effective length of database: 43,165 effective search space: 14891925 effective search space used: 14891925 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 94 (40.8 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SCER-S28-01-002525 ORFP:YGR249W MGA1, Chr VII from 988045-989415 (456 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SCER-S28-01-002525 ORFP:YGR249W MGA1, Chr VII from 988045-989415 676 0.0 SCER-S28-01-002073 ORFP:YGL073W HSF1, Chr VII from 368751-371252 52 4e-09 >SCER-S28-01-002525 ORFP:YGR249W MGA1, Chr VII from 988045-989415 Length = 456 Score = 676 bits (1743), Expect = 0.0 Identities = 347/456 (76%), Positives = 347/456 (76%) Query: 1 MQPKTFVHQLHAILLEPEVNKWIYWSPTDNTVFFLKPYDPNFSTHVLKRYFKHGNVNSFV 60 MQPKTFVHQLHAILLEPEVNKWIYWSPTDNTVFFLKPYDPNFSTHVLKRYFKHGNVNSFV Sbjct: 1 MQPKTFVHQLHAILLEPEVNKWIYWSPTDNTVFFLKPYDPNFSTHVLKRYFKHGNVNSFV 60 Query: 61 RQLHMYGFHKLSHPSPDQSSANNGNVKELVEWKFTHPSGFFFKEANAGILNKIQRKSTGV 120 RQLHMYGFHKLSHPSPDQSSANNGNVKELVEWKFTHPSGFFFKEANAGILNKIQRKSTGV Sbjct: 61 RQLHMYGFHKLSHPSPDQSSANNGNVKELVEWKFTHPSGFFFKEANAGILNKIQRKSTGV 120 Query: 121 GKDGKRKNILSPISVSYVDASRLNVLSQQSGPVSAREPSNMFMGSPVHYSTXXXXXXXXX 180 GKDGKRKNILSPISVSYVDASRLNVLSQQSGPVSAREPSNMFMGSPVHYST Sbjct: 121 GKDGKRKNILSPISVSYVDASRLNVLSQQSGPVSAREPSNMFMGSPVHYSTSQSPPHISI 180 Query: 181 XXXXXXXGPYLISSLPPQQPTVNMMRRQSISARMMNSYDYPNQFSTQDSIXXXXXXXXXX 240 GPYLISSLPPQQPTVNMMRRQSISARMMNSYDYPNQFSTQDSI Sbjct: 181 PQQQQSSGPYLISSLPPQQPTVNMMRRQSISARMMNSYDYPNQFSTQDSIVQPQQPQQVL 240 Query: 241 XXXXXXGPPMKKXXXXXXXXXXXXXXXPIVNYPMPYHPGAFAXXXXXXXXXXXXXXXXXX 300 GPPMKK PIVNYPMPYHPGAFA Sbjct: 241 SPQALSGPPMKKSGTLSSTDDLKTTSLPIVNYPMPYHPGAFAQQQQQQQQPLPTVPPYSS 300 Query: 301 XXXXXXXXXXXXXXXXXXXXXXGVCNNNVTLPKKSNISERQALDNHIQTLKNSLSTITDL 360 GVCNNNVTLPKKSNISERQALDNHIQTLKNSLSTITDL Sbjct: 301 YSTPFPSMMNSLSNSASNSPALGVCNNNVTLPKKSNISERQALDNHIQTLKNSLSTITDL 360 Query: 361 IEKHINSASQDENKTLTNDAMNKDLRTSLSLLQNSKEEIIQLESKWMSMQSVKTTALPLQ 420 IEKHINSASQDENKTLTNDAMNKDLRTSLSLLQNSKEEIIQLESKWMSMQSVKTTALPLQ Sbjct: 361 IEKHINSASQDENKTLTNDAMNKDLRTSLSLLQNSKEEIIQLESKWMSMQSVKTTALPLQ 420 Query: 421 ETTNXXXXXXXXXXXXXXXXXXXXXXGEVATKPASY 456 ETTN GEVATKPASY Sbjct: 421 ETTNTSSTLTSLTSSIIPKSIPIITKGEVATKPASY 456 >SCER-S28-01-002073 ORFP:YGL073W HSF1, Chr VII from 368751-371252 Length = 833 Score = 52.0 bits (123), Expect = 4e-09 Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 14/113 (12%) Query: 6 FVHQLHAILLEPEVNKWIYWSPTDNTVFFLKPYDPNFSTHVLKRYFKHGNVNSFVRQLHM 65 FV++L ++L + K I W+ + F+ F +L +YFKH N SFVRQL+M Sbjct: 175 FVNKLWSMLNDDSNTKLIQWAEDGKS--FIVTNREEFVHQILPKYFKHSNFASFVRQLNM 232 Query: 66 YGFHKLSHPSPD--QSSANNGNVKELVEWKFTHPSGFFFKEANAGILNKIQRK 116 YG+HK+ QSS+++ +W+F + + F +L KI R+ Sbjct: 233 YGWHKVQDVKSGSIQSSSDD-------KWQFENEN---FIRGREDLLEKIIRQ 275 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.314 0.129 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,430 Number of Sequences: 78 Number of extensions: 1397 Number of successful extensions: 16 Number of sequences better than 1.0e-05: 2 Number of HSP's better than 0.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 11 Number of HSP's gapped (non-prelim): 3 length of query: 456 length of database: 48,235 effective HSP length: 66 effective length of query: 390 effective length of database: 43,087 effective search space: 16803930 effective search space used: 16803930 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 94 (40.8 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SCER-S28-01-002584 ORFP:YHL009W-B YHL009W-B, Chr VIII from 85904-86989,86991-91313 (1802 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SCER-S28-01-002584 ORFP:YHL009W-B YHL009W-B, Chr VIII from 8590... 3508 0.0 SCER-S28-01-000806 ORFP:YDL058W USO1, Chr IV from 345664-351036 57 4e-10 SCER-S28-01-002651 ORFP:YHR023W MYO1, Chr VIII from 151657-157443 49 1e-07 >SCER-S28-01-002584 ORFP:YHL009W-B YHL009W-B, Chr VIII from 85904-86989,86991-91313 Length = 1802 Score = 3508 bits (9097), Expect = 0.0 Identities = 1750/1802 (97%), Positives = 1750/1802 (97%) Query: 1 MATPVRDETRNVIDDNISARIQSKVKTNDTVRQTPSSLRKVSIKDEQVKQYQRNLNRFKT 60 MATPVRDETRNVIDDNISARIQSKVKTNDTVRQTPSSLRKVSIKDEQVKQYQRNLNRFKT Sbjct: 1 MATPVRDETRNVIDDNISARIQSKVKTNDTVRQTPSSLRKVSIKDEQVKQYQRNLNRFKT 60 Query: 61 ILNGLKAEEEKLSETDDIQMLAEKLLKLGETIDKVENRIVDLVEKIQLLETNENNNILHE 120 ILNGLKAEEEKLSETDDIQMLAEKLLKLGETIDKVENRIVDLVEKIQLLETNENNNILHE Sbjct: 61 ILNGLKAEEEKLSETDDIQMLAEKLLKLGETIDKVENRIVDLVEKIQLLETNENNNILHE 120 Query: 121 HIDATGTYYLFDTLTSTNKRFYPKDCVFDYRTNNVENIPILLNNFKKFIKKYQFDDVFEN 180 HIDATGTYYLFDTLTSTNKRFYPKDCVFDYRTNNVENIPILLNNFKKFIKKYQFDDVFEN Sbjct: 121 HIDATGTYYLFDTLTSTNKRFYPKDCVFDYRTNNVENIPILLNNFKKFIKKYQFDDVFEN 180 Query: 181 DIIEIDPRENEILCKIIKEGLGESLDIMNTNTTDIFRIIDGLKNKYRSLHGRDVRIRAWE 240 DIIEIDPRENEILCKIIKEGLGESLDIMNTNTTDIFRIIDGLKNKYRSLHGRDVRIRAWE Sbjct: 181 DIIEIDPRENEILCKIIKEGLGESLDIMNTNTTDIFRIIDGLKNKYRSLHGRDVRIRAWE 240 Query: 241 KVLVDTTCRNSALLMNKLQKLVLMEKWIFSKCCQDCPNLKDYLQEAIMGTLHESLRNSVK 300 KVLVDTTCRNSALLMNKLQKLVLMEKWIFSKCCQDCPNLKDYLQEAIMGTLHESLRNSVK Sbjct: 241 KVLVDTTCRNSALLMNKLQKLVLMEKWIFSKCCQDCPNLKDYLQEAIMGTLHESLRNSVK 300 Query: 301 QRLYNIPHNVGINHEEFLINTVIETVIDLSPIADDQIENSCMYCKSVFHCSINCKKKPNR 360 QRLYNIPHNVGINHEEFLINTVIETVIDLSPIADDQIENSCMYCKSVFHCSINCKKKPNR Sbjct: 301 QRLYNIPHNVGINHEEFLINTVIETVIDLSPIADDQIENSCMYCKSVFHCSINCKKKPNR 360 Query: 361 ELGLTRPISQKPIIYKVHRDNNNLSPVQNEQKSWNKTQKKSNKVYNSKKLVIIDTGSGVN 420 ELGLTRPISQKPIIYKVHRDNNNLSPVQNEQKSWNKTQKKSNKVYNSKKLVIIDTGSGVN Sbjct: 361 ELGLTRPISQKPIIYKVHRDNNNLSPVQNEQKSWNKTQKKSNKVYNSKKLVIIDTGSGVN 420 Query: 421 ITNDKTLLHNYEDSNRSTRFFGIGKNSSVSVKGYGYIKIKNGHNNTDNKCLLTYYVPEEE 480 ITNDKTLLHNYEDSNRSTRFFGIGKNSSVSVKGYGYIKIKNGHNNTDNKCLLTYYVPEEE Sbjct: 421 ITNDKTLLHNYEDSNRSTRFFGIGKNSSVSVKGYGYIKIKNGHNNTDNKCLLTYYVPEEE 480 Query: 481 STIISCYDLAKKTKMVLSRKYTRLGNXXXXXXXXXVNGVIHVKMNELIERPSDDSKINAI 540 STIISCYDLAKKTKMVLSRKYTRLGN VNGVIHVKMNELIERPSDDSKINAI Sbjct: 481 STIISCYDLAKKTKMVLSRKYTRLGNKIIKIKTKIVNGVIHVKMNELIERPSDDSKINAI 540 Query: 541 KPTSSPGFKLNKRSITLEDAHKRMGHTGIQQIENSIKHNHYEESLDLIKEPNEFWCQTCK 600 KPTSSPGFKLNKRSITLEDAHKRMGHTGIQQIENSIKHNHYEESLDLIKEPNEFWCQTCK Sbjct: 541 KPTSSPGFKLNKRSITLEDAHKRMGHTGIQQIENSIKHNHYEESLDLIKEPNEFWCQTCK 600 Query: 601 ISKATKRNHYTGSMNNHSTDHEPGSSWCMDIFGPVSSSNADTKRYMLIMVDNNTRYCMTS 660 ISKATKRNHYTGSMNNHSTDHEPGSSWCMDIFGPVSSSNADTKRYMLIMVDNNTRYCMTS Sbjct: 601 ISKATKRNHYTGSMNNHSTDHEPGSSWCMDIFGPVSSSNADTKRYMLIMVDNNTRYCMTS 660 Query: 661 THFNKNAETILAQIRKNIQYVETQFDRKVREINSDRGTEFTNDQIEEYFISKGIHHILTS 720 THFNKNAETILAQIRKNIQYVETQFDRKVREINSDRGTEFTNDQIEEYFISKGIHHILTS Sbjct: 661 THFNKNAETILAQIRKNIQYVETQFDRKVREINSDRGTEFTNDQIEEYFISKGIHHILTS 720 Query: 721 TQDHAANGRAERYIRTIVTDATTLLRQSNLRVKFWEYAVTSATNIRNCLEHKSTGKLPLK 780 TQDHAANGRAERYIRTIVTDATTLLRQSNLRVKFWEYAVTSATNIRNCLEHKSTGKLPLK Sbjct: 721 TQDHAANGRAERYIRTIVTDATTLLRQSNLRVKFWEYAVTSATNIRNCLEHKSTGKLPLK 780 Query: 781 AISRQPVTVRLMSFLPFGEKGIIWNHNHKKLKPSGLPSIILCKDPNSYGYKFFIPSKNKI 840 AISRQPVTVRLMSFLPFGEKGIIWNHNHKKLKPSGLPSIILCKDPNSYGYKFFIPSKNKI Sbjct: 781 AISRQPVTVRLMSFLPFGEKGIIWNHNHKKLKPSGLPSIILCKDPNSYGYKFFIPSKNKI 840 Query: 841 VTSDNYTIPNYTMDGRVRNTQNIYKSHQFSSHNDNEEDQIETVTNLCEALENYEDDNKPI 900 VTSDNYTIPNYTMDGRVRNTQNIYKSHQFSSHNDNEEDQIETVTNLCEALENYEDDNKPI Sbjct: 841 VTSDNYTIPNYTMDGRVRNTQNIYKSHQFSSHNDNEEDQIETVTNLCEALENYEDDNKPI 900 Query: 901 TRLEDLFTEEELSQIDSNAKYPSPSNNLEGDLDYVFSDVEESGDYDVESELSTTNTSIST 960 TRLEDLFTEEELSQIDSNAKYPSPSNNLEGDLDYVFSDVEESGDYDVESELSTTNTSIST Sbjct: 901 TRLEDLFTEEELSQIDSNAKYPSPSNNLEGDLDYVFSDVEESGDYDVESELSTTNTSIST 960 Query: 961 DKNKILSNKDFNSELASTEISISEIDKKGLINTSHIDEDKYDEKVHRIPSIIQEKLVGSK 1020 DKNKILSNKDFNSELASTEISISEIDKKGLINTSHIDEDKYDEKVHRIPSIIQEKLVGSK Sbjct: 961 DKNKILSNKDFNSELASTEISISEIDKKGLINTSHIDEDKYDEKVHRIPSIIQEKLVGSK 1020 Query: 1021 NTIKINDENRISDRIRSKNIGSILNTGLSRCVDITDESITNKDESMHNAKPELIQEQFNK 1080 NTIKINDENRISDRIRSKNIGSILNTGLSRCVDITDESITNKDESMHNAKPELIQEQFNK Sbjct: 1021 NTIKINDENRISDRIRSKNIGSILNTGLSRCVDITDESITNKDESMHNAKPELIQEQFNK 1080 Query: 1081 TNHETSFPKEGSIGTNVKFRNTDNEISLKTGDTSLPIKTLESINNHHSNDYSTNKVEKFE 1140 TNHETSFPKEGSIGTNVKFRNTDNEISLKTGDTSLPIKTLESINNHHSNDYSTNKVEKFE Sbjct: 1081 TNHETSFPKEGSIGTNVKFRNTDNEISLKTGDTSLPIKTLESINNHHSNDYSTNKVEKFE 1140 Query: 1141 KENHHPPPIEDIVDMSDQTDMESNCQDGNNLKELKVTDKNVPTDNGTNVSPRLEQNIEAS 1200 KENHHPPPIEDIVDMSDQTDMESNCQDGNNLKELKVTDKNVPTDNGTNVSPRLEQNIEAS Sbjct: 1141 KENHHPPPIEDIVDMSDQTDMESNCQDGNNLKELKVTDKNVPTDNGTNVSPRLEQNIEAS 1200 Query: 1201 GSPVQTVNKSAFLNKEFSSLNMKRKRKRHDKNNSLTSYELERDKKRSKRNRVKLIPDNME 1260 GSPVQTVNKSAFLNKEFSSLNMKRKRKRHDKNNSLTSYELERDKKRSKRNRVKLIPDNME Sbjct: 1201 GSPVQTVNKSAFLNKEFSSLNMKRKRKRHDKNNSLTSYELERDKKRSKRNRVKLIPDNME 1260 Query: 1261 TVSAQKIRAIYYNEAISKNPDLKEKHEYKQAYHKELQNLKDMKVFDVDVKYSRSEIPDNL 1320 TVSAQKIRAIYYNEAISKNPDLKEKHEYKQAYHKELQNLKDMKVFDVDVKYSRSEIPDNL Sbjct: 1261 TVSAQKIRAIYYNEAISKNPDLKEKHEYKQAYHKELQNLKDMKVFDVDVKYSRSEIPDNL 1320 Query: 1321 IVPTNTIFTKKRNGIYKARIVCRGDTQSPDTYSVITTESLNHNHIKIFLMIANNRNMFMK 1380 IVPTNTIFTKKRNGIYKARIVCRGDTQSPDTYSVITTESLNHNHIKIFLMIANNRNMFMK Sbjct: 1321 IVPTNTIFTKKRNGIYKARIVCRGDTQSPDTYSVITTESLNHNHIKIFLMIANNRNMFMK 1380 Query: 1381 TLDINHAFLYAKLEEEIYIPHPHDRRCVVKLNKALYGLKQSPKEWNDHLRQYLNGIGLKD 1440 TLDINHAFLYAKLEEEIYIPHPHDRRCVVKLNKALYGLKQSPKEWNDHLRQYLNGIGLKD Sbjct: 1381 TLDINHAFLYAKLEEEIYIPHPHDRRCVVKLNKALYGLKQSPKEWNDHLRQYLNGIGLKD 1440 Query: 1441 NSYTPGLYQTEDKNLMIAVYVDDCVIAASNEQRLDEFINKLKSNFELKXXXXXXXXXXXX 1500 NSYTPGLYQTEDKNLMIAVYVDDCVIAASNEQRLDEFINKLKSNFELK Sbjct: 1441 NSYTPGLYQTEDKNLMIAVYVDDCVIAASNEQRLDEFINKLKSNFELKITGTLIDDVLDT 1500 Query: 1501 XXXXMDLVYNKRLGTIDLTLKSFINRMDKKYNEELKKIRKSSIPHMSTYKIDPKKDVLQM 1560 MDLVYNKRLGTIDLTLKSFINRMDKKYNEELKKIRKSSIPHMSTYKIDPKKDVLQM Sbjct: 1501 DILGMDLVYNKRLGTIDLTLKSFINRMDKKYNEELKKIRKSSIPHMSTYKIDPKKDVLQM 1560 Query: 1561 SEEEFRQGVLKLQQLLGELNYVRHKCRYDINFAVKKVARLVNYPHERVFYMIYKIIQYLV 1620 SEEEFRQGVLKLQQLLGELNYVRHKCRYDINFAVKKVARLVNYPHERVFYMIYKIIQYLV Sbjct: 1561 SEEEFRQGVLKLQQLLGELNYVRHKCRYDINFAVKKVARLVNYPHERVFYMIYKIIQYLV 1620 Query: 1621 RYKDIGIHYDRDCNKDKKVIAITDASVGSEYDAQSRIGVILWYGMNIFNVYSNKSTNRCV 1680 RYKDIGIHYDRDCNKDKKVIAITDASVGSEYDAQSRIGVILWYGMNIFNVYSNKSTNRCV Sbjct: 1621 RYKDIGIHYDRDCNKDKKVIAITDASVGSEYDAQSRIGVILWYGMNIFNVYSNKSTNRCV 1680 Query: 1681 SSTEAELHAIYEGYADSETLKVTLKELGEGDNNDIVMITDSKPAIQGLNRSYQQPXXXXX 1740 SSTEAELHAIYEGYADSETLKVTLKELGEGDNNDIVMITDSKPAIQGLNRSYQQP Sbjct: 1681 SSTEAELHAIYEGYADSETLKVTLKELGEGDNNDIVMITDSKPAIQGLNRSYQQPKEKFT 1740 Query: 1741 XXXXXXXXXXXXXXXXXXXXXXGKGNIADLLTKPVSASDFKRFIQVLKNKITSQDILAST 1800 GKGNIADLLTKPVSASDFKRFIQVLKNKITSQDILAST Sbjct: 1741 WIKTEIIKEKIKEKSIKLLKITGKGNIADLLTKPVSASDFKRFIQVLKNKITSQDILAST 1800 Query: 1801 DY 1802 DY Sbjct: 1801 DY 1802 >SCER-S28-01-000806 ORFP:YDL058W USO1, Chr IV from 345664-351036 Length = 1790 Score = 57.4 bits (137), Expect = 4e-10 Identities = 226/1168 (19%), Positives = 434/1168 (37%), Gaps = 199/1168 (17%) Query: 255 MNKLQKLVLMEKWIFSKCCQDCPNLKDYLQEAIMGTLHESLRNSVKQRLYNIPHNVGINH 314 + KLQ+ K + + + + L E ++ +E K ++ N H+ + Sbjct: 732 VEKLQRQCTKLKGEITSLQTETESTHENLTEKLIALTNEHKELDEKYQILNSSHS-SLKE 790 Query: 315 EEFLINTVIETVID----------LSPIADDQIENSCMYCKSVFHCSINCKKKPNRELGL 364 ++ T ++ V D + D + + + + KS H + K E GL Sbjct: 791 NFSILETELKNVRDSLDEMTQLRDVLETKDKENQTALLEYKSTIHKQEDSIK--TLEKGL 848 Query: 365 TRPISQKPI----IYKVHRD----NNNLSPVQNEQKSWNKTQKKSNKVYNSKKLVIIDTG 416 +SQK I K+ +D + + V+ K+ K + KSN V + K+ + Sbjct: 849 ETILSQKKKAEDGINKMGKDLFALSREMQAVEENCKNLQKEKDKSN-VNHQKETKSLKED 907 Query: 417 SGVNITNDKTLLHNYEDSNRSTRFFGIGKNSSVSVKGYGYIKIKNGHNN-----TDNKCL 471 IT K + N E+ K +S + Y H+N T+ Sbjct: 908 IAAKITEIKAINENLEEMKIQCNNLSKEKEH-ISKELVEYKSRFQSHDNLVAKLTEKLKS 966 Query: 472 LTYYVPEEESTIISCYDLAKKTKMVLSRKYTRLGNXXXXXXXXXVNGVIHVKMNELIERP 531 L + ++ S +++K S + + L N ++ + K N IER Sbjct: 967 LANNYKDMQAENESLIKAVEESKNESSIQLSNLQNK--------IDSMSQEKENFQIERG 1018 Query: 532 SDDSKINAIKPTSSPGFKLNKRSITLEDAHKRMGHTGIQQIENSIKHNHYEESLDLIKEP 591 S + I +K T S + + I+ D+ K + YE + L+KE Sbjct: 1019 SIEKNIEQLKKTISDLEQTKEEIISKSDSSK----------------DEYESQISLLKEK 1062 Query: 592 NEFWC-----QTCKISKATKRNH--------YTGSMNNHSTDHEPGSSWCMDIFGPVSSS 638 E KIS+ TK Y N T E ++ + Sbjct: 1063 LETATTANDENVNKISELTKTREELEAELAAYKNLKNELETKLETSEKALKEV--KENEE 1120 Query: 639 NADTKRYMLIMVDNNTRYCMTSTHFN-----KNAETILAQIRKNIQYV---ETQFDRKVR 690 + ++ L T+ + S N K E + AQ++K + + E Q++ ++ Sbjct: 1121 HLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIANKERQYNEEIS 1180 Query: 691 EINSDRGTEFTNDQIEEYFISKGIHHILTSTQDHAANGRAERYIRTIVTDATTLLRQSNL 750 ++N E T+ Q E I K + + + + ++ DA NL Sbjct: 1181 QLND----EITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDAL------NL 1230 Query: 751 RVKFWEYAVTSATNIRNCLEHKSTGKLPLKAISRQPVTVR-LMSFLPFGEKGIIWNHNHK 809 ++K E + TN + LE +K++ + V ++ L F EK + + Sbjct: 1231 QIK--ELKKKNETNEASLLES-------IKSVESETVKIKELQDECNFKEKEV--SELED 1279 Query: 810 KLKPSGLPSIILCKDPNSYGYKFFIPSKNKIVTSDNYTIPNYTMDGRVRNTQNIYKSHQF 869 KLK S +D NS Y KI + Sbjct: 1280 KLKAS--------EDKNSK-YLELQKESEKI-------------------------KEEL 1305 Query: 870 SSHNDNEEDQIETVTNLCEALENYEDDNKPITRLEDLFTEEELSQIDSNAKYPSPSNNLE 929 + + Q+E +TNL +A E E + ++RL+ +EE N E Sbjct: 1306 DAKTTELKIQLEKITNLSKAKEKSESE---LSRLKKTSSEER--------------KNAE 1348 Query: 930 GDLDYVFSDVE-ESGDYDVESELSTTNTSISTDK--NKILSNKDFNSELAS-TEISISEI 985 L+ + ++++ ++ ++ E +L +S T + KI + +D L + E+ EI Sbjct: 1349 EQLEKLKNEIQIKNQAFEKERKLLNEGSSTITQEYSEKINTLEDELIRLQNENELKAKEI 1408 Query: 986 D--KKGLINTSHIDEDKYDEKVHRIPSIIQEKLVGSKNTIKINDENRISDRIRSKNIGSI 1043 D + L S +++ +EK + I S+ Q++++ K+ I NDE +S +K Sbjct: 1409 DNTRSELEKVSLSNDELLEEKQNTIKSL-QDEILSYKDKITRNDEKLLSIERDNKRDLES 1467 Query: 1044 LNTGLSRCVDI---TDESITNKDESMHNAKPELIQ-EQFNKTNHETSFPKEGSIGTNVK- 1098 L L + +E + +E K EL + ++ K T E + ++++ Sbjct: 1468 LKEQLRAAQESKAKVEEGLKKLEEESSKEKAELEKSKEMMKKLESTIESNETELKSSMET 1527 Query: 1099 FRNTDNEISLKTGDTSLPIKTLESINNHHSNDYSTNKVEKFEKENHHPPPIEDI-----V 1153 R +D ++ IK L+ H +++ + EK+ IE++ + Sbjct: 1528 IRKSDEKLEQSKKSAEEDIKNLQ-----HEKSDLISRINESEKD------IEELKSKLRI 1576 Query: 1154 DMSDQTDMESNCQDGNNLKELKVTDKNVPTDNGTNVSPRLEQNIEASGSPVQTVNKSAFL 1213 + +++E+ Q+ NN +E K+ + + T + +LE +IE Q KS Sbjct: 1577 EAKSGSELETVKQELNNAQE-KI---RINAEENTVLKSKLE-DIERELKDKQAEIKSNQE 1631 Query: 1214 NKEFSSLNMKRKRKRHDKNNSLTSYELERDKKRSKRNRVKLIPDNMETVSAQKIRAIYYN 1273 KE + +K + D T + ++ ++ + K + + + YN Sbjct: 1632 EKELLTSRLKELEQELDS----TQQKAQKSEEERRAEVRKFQVEKSQLDEKAMLLETKYN 1687 Query: 1274 EAISKNPDLKE-----------KHEYKQAYHKELQNLKDMKVFDVDVKYSRSEIPDNLIV 1322 + ++K K + + + KEL NLK + RSEI D +++ Sbjct: 1688 DLVNKEQAWKRDEDTVKKTTDSQRQEIEKLAKELDNLKAENSKLKEANEDRSEIDDLMLL 1747 Query: 1323 PTNTIFTKKRNGIYKARIVCRGDTQSPD 1350 T+ ++N Y++++ G S D Sbjct: 1748 VTD---LDEKNAKYRSKLKDLGVEISSD 1772 >SCER-S28-01-002651 ORFP:YHR023W MYO1, Chr VIII from 151657-157443 Length = 1928 Score = 49.3 bits (116), Expect = 1e-07 Identities = 68/342 (19%), Positives = 146/342 (42%), Gaps = 44/342 (12%) Query: 1000 KYDEKVHRIPSIIQE-----KLVGSKNTIKINDENRISDRIRSKNIGSILNTGLSRCVDI 1054 K++E+++++ + +QE K + KN +N+ D + + N L V Sbjct: 865 KFNEQINKLKNDLQEMESKKKFLEEKNQKTVNELENTQDLLNQEKENLRKNESLLNRVKT 924 Query: 1055 TDESITNKDESMHNAKPELIQEQFN-KTNHETSFPKEGSIGTNVKFRNTDNEISLKTGDT 1113 + E++ + + + + K E+ +E+ N E + K + ++ R E L + + Sbjct: 925 SSETLQKQFDDLVSEKDEISREKLEVAQNLEEAHQKIQGLQETIREREATLE-KLHSKNN 983 Query: 1114 SLPIKTLESINNHHSNDYSTN---KVEKFEKENHHPPPIEDIVDMSDQTDMESNCQDGNN 1170 L IK + +N S + S+ K K + EN ++D+++ ++ N + ++ Sbjct: 984 EL-IKQISDLNCDISKEQSSQSLIKESKLKLEN-EIKRLKDVINSKEEEIKSFNDKLSSS 1041 Query: 1171 LKELKVTDKNVPTDNGTNVSPRLEQNIEASGSPVQTVNK----------SAFLNKEFSSL 1220 ++L + K V + N++ Q++ S +++ N+ + NKE L Sbjct: 1042 EEDLDI--KLVTLEKNCNIAMSRLQSLVTENSDLRSKNENFKKEKAALNNQLKNKESELL 1099 Query: 1221 NMKRKRKRHDKNNSLTSYELERDKKRSKRNRVKLIPDNMETVSAQKIRAIYYNEAISKNP 1280 MK K H K L ++ +RD S+ ++ T ++ R I E S Sbjct: 1100 KMKEKIDNHKK--ELATFSKQRDDAVSEHGKI--------TAELKETR-IQLTEYKSNYQ 1148 Query: 1281 DLKEKHEYKQAYHKE---------LQNLKDMKVFDVDVKYSR 1313 +KE++ Q KE +++L D K+ +++ + S+ Sbjct: 1149 KIKEEYSNFQRETKEQEQKKRNSLVESLNDSKIKELEARLSQ 1190 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.314 0.132 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 184,443 Number of Sequences: 78 Number of extensions: 9390 Number of successful extensions: 67 Number of sequences better than 1.0e-05: 3 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 61 Number of HSP's gapped (non-prelim): 11 length of query: 1802 length of database: 48,235 effective HSP length: 76 effective length of query: 1726 effective length of database: 42,307 effective search space: 73021882 effective search space used: 73021882 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 99 (42.7 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SCER-S28-01-002651 ORFP:YHR023W MYO1, Chr VIII from 151657-157443 (1928 letters) Database: tst.fasta 78 sequences; 48,235 total letters Searching.done Score E Sequences producing significant alignments: (bits) Value SCER-S28-01-002651 ORFP:YHR023W MYO1, Chr VIII from 151657-157443 3607 0.0 SCER-S28-01-000806 ORFP:YDL058W USO1, Chr IV from 345664-351036 150 3e-38 MGEN-G37-01-000221 MG218 cytadherence accessory protein (hmw2) 125 1e-30 SCER-S28-01-001306 ORFP:YDR285W ZIP1, Chr IV from 1032427-1035054 80 6e-17 MGEN-G37-01-000335 MG328 conserved hypothetical protein 75 1e-15 MPNE-M12-01-000474 gi|13508213|ref|NP_110162.1| coiled coil pro... 72 2e-14 SYNE-PCC-01-000727 sll1120 60 5e-11 MJAN-DSM-01-001277 MJ1254 hypothetical protein 54 5e-09 SCER-S28-01-001667 ORFP:YER008C SEC3, Chr V from 167807-171817,... 53 8e-09 SYNE-PCC-01-001071 sll1583 53 1e-08 SYNE-PCC-01-000943 sll1424 52 1e-08 SCER-S28-01-002584 ORFP:YHL009W-B YHL009W-B, Chr VIII from 8590... 49 1e-07 >SCER-S28-01-002651 ORFP:YHR023W MYO1, Chr VIII from 151657-157443 Length = 1928 Score = 3607 bits (9354), Expect = 0.0 Identities = 1863/1928 (96%), Positives = 1863/1928 (96%) Query: 1 MTGGQSCSSNMIVWIPDEKEVFVKGELMSTDINKNKFTGQEEQIGIVHPLDSTEVSNLVQ 60 MTGGQSCSSNMIVWIPDEKEVFVKGELMSTDINKNKFTGQEEQIGIVHPLDSTEVSNLVQ Sbjct: 1 MTGGQSCSSNMIVWIPDEKEVFVKGELMSTDINKNKFTGQEEQIGIVHPLDSTEVSNLVQ 60 Query: 61 VRISDVFPVNPSTFDKVENMSELTHLNEPSVLYNLEKRYDCDLIYTYSGLFLVAINPYHN 120 VRISDVFPVNPSTFDKVENMSELTHLNEPSVLYNLEKRYDCDLIYTYSGLFLVAINPYHN Sbjct: 61 VRISDVFPVNPSTFDKVENMSELTHLNEPSVLYNLEKRYDCDLIYTYSGLFLVAINPYHN 120 Query: 121 LNLYSEDHINLYHNKHNRLSKSRLDENSHEKLPPHIFAIAEEAYENLLSEGKDQSILVTG 180 LNLYSEDHINLYHNKHNRLSKSRLDENSHEKLPPHIFAIAEEAYENLLSEGKDQSILVTG Sbjct: 121 LNLYSEDHINLYHNKHNRLSKSRLDENSHEKLPPHIFAIAEEAYENLLSEGKDQSILVTG 180 Query: 181 ESGAGKTENTKKILQYLASITSGSPSNIAPVSGSSIVESFEMKILQSNPILESFGNAQTV 240 ESGAGKTENTKKILQYLASITSGSPSNIAPVSGSSIVESFEMKILQSNPILESFGNAQTV Sbjct: 181 ESGAGKTENTKKILQYLASITSGSPSNIAPVSGSSIVESFEMKILQSNPILESFGNAQTV 240 Query: 241 RNNNSSRFGKFIKIEFNEHGMINGAHIEWYLLEKSRIVHQNSKERNYHIFYQLLSGLDDS 300 RNNNSSRFGKFIKIEFNEHGMINGAHIEWYLLEKSRIVHQNSKERNYHIFYQLLSGLDDS Sbjct: 241 RNNNSSRFGKFIKIEFNEHGMINGAHIEWYLLEKSRIVHQNSKERNYHIFYQLLSGLDDS 300 Query: 301 ELKNLRLKSRNVKDYKILSNSNQDIIPGINDVENFKELLSALNIIGFSKDQIRWIFQVVA 360 ELKNLRLKSRNVKDYKILSNSNQDIIPGINDVENFKELLSALNIIGFSKDQIRWIFQVVA Sbjct: 301 ELKNLRLKSRNVKDYKILSNSNQDIIPGINDVENFKELLSALNIIGFSKDQIRWIFQVVA 360 Query: 361 IILLIGNIEFVSDRAEQASFKNDVSAICSNLGVDEKDFQTAILRPRSKAGKEWVSQSKNS 420 IILLIGNIEFVSDRAEQASFKNDVSAICSNLGVDEKDFQTAILRPRSKAGKEWVSQSKNS Sbjct: 361 IILLIGNIEFVSDRAEQASFKNDVSAICSNLGVDEKDFQTAILRPRSKAGKEWVSQSKNS 420 Query: 421 QQAKFILNALSRNLYERLFGYIVDMINKNLDHGSATLNYIGLLDIAGFEIFENNSFEQLC 480 QQAKFILNALSRNLYERLFGYIVDMINKNLDHGSATLNYIGLLDIAGFEIFENNSFEQLC Sbjct: 421 QQAKFILNALSRNLYERLFGYIVDMINKNLDHGSATLNYIGLLDIAGFEIFENNSFEQLC 480 Query: 481 INYTNEKLQQFFNNHMFVLEQSEYLKENIQWDYIDYGKDLQLTIDLIESKGPPTGVLPLL 540 INYTNEKLQQFFNNHMFVLEQSEYLKENIQWDYIDYGKDLQLTIDLIESKGPPTGVLPLL Sbjct: 481 INYTNEKLQQFFNNHMFVLEQSEYLKENIQWDYIDYGKDLQLTIDLIESKGPPTGVLPLL 540 Query: 541 DEEAVLPKSTDESFYSKLISTWDQNSSKFKRSRLKNGFILKHYAGDVEYTVEGWXXXXXX 600 DEEAVLPKSTDESFYSKLISTWDQNSSKFKRSRLKNGFILKHYAGDVEYTVEGW Sbjct: 541 DEEAVLPKSTDESFYSKLISTWDQNSSKFKRSRLKNGFILKHYAGDVEYTVEGWLSKNKD 600 Query: 601 XXXXXXXXXXXXXXXXXXXKLFQPEGEKSSSAGVEANISNQEVKKSARTSTFKTTSSRHR 660 KLFQPEGEKSSSAGVEANISNQEVKKSARTSTFKTTSSRHR Sbjct: 601 PLNDNLLSLLSSSQNDIISKLFQPEGEKSSSAGVEANISNQEVKKSARTSTFKTTSSRHR 660 Query: 661 EQQITLLNQLASTHPHFVRCIIPNNVKKVKTFNRRLILDQLRCNGVLEGIRLAREGYPNR 720 EQQITLLNQLASTHPHFVRCIIPNNVKKVKTFNRRLILDQLRCNGVLEGIRLAREGYPNR Sbjct: 661 EQQITLLNQLASTHPHFVRCIIPNNVKKVKTFNRRLILDQLRCNGVLEGIRLAREGYPNR 720 Query: 721 IAFQEFFQRYRILYPENSTTTTFSSKLKASTKQNCEFLLTSLQLDTKVYKIGNTKLFFKA 780 IAFQEFFQRYRILYPENSTTTTFSSKLKASTKQNCEFLLTSLQLDTKVYKIGNTKLFFKA Sbjct: 721 IAFQEFFQRYRILYPENSTTTTFSSKLKASTKQNCEFLLTSLQLDTKVYKIGNTKLFFKA 780 Query: 781 GVLADLEKQKDVKLNNIMIKLTATIRGYTVRKEITYHLQKLKKTRVIGNTFRLYNRLVKE 840 GVLADLEKQKDVKLNNIMIKLTATIRGYTVRKEITYHLQKLKKTRVIGNTFRLYNRLVKE Sbjct: 781 GVLADLEKQKDVKLNNIMIKLTATIRGYTVRKEITYHLQKLKKTRVIGNTFRLYNRLVKE 840 Query: 841 DPWFNLFIRIKPLLTSSNDMTRTKKFNEQINKLKNDLQEMESKKKFLEEKNQKTVNELEN 900 DPWFNLFIRIKPLLTSSNDMTRTKKFNEQINKLKNDLQEMESKKKFLEEKNQKTVNELEN Sbjct: 841 DPWFNLFIRIKPLLTSSNDMTRTKKFNEQINKLKNDLQEMESKKKFLEEKNQKTVNELEN 900 Query: 901 TQDLLNQEKENLRKNESLLNRVKTSSETLQKQFDDLVSEKDEISREKLEVAQNLEEAHQK 960 TQDLLNQEKENLRKNESLLNRVKTSSETLQKQFDDLVSEKDEISREKLEVAQNLEEAHQK Sbjct: 901 TQDLLNQEKENLRKNESLLNRVKTSSETLQKQFDDLVSEKDEISREKLEVAQNLEEAHQK 960 Query: 961 IQGLQETIREREATLEKLHSKNNELIKQISDLNCDISKEQSSQSLIKESKLKLENEIKRL 1020 IQGLQETIREREATLEKLHSKNNELIKQISDLNCDISKEQSSQSLIKESKLKLENEIKRL Sbjct: 961 IQGLQETIREREATLEKLHSKNNELIKQISDLNCDISKEQSSQSLIKESKLKLENEIKRL 1020 Query: 1021 KDVINSKEEEIKSFNDKLSSSEEDLDIKLVTLEKNCNIAMSRLQSLVTENSDLRSKNENF 1080 KDVINSKEEEIKSFNDKLSSSEEDLDIKLVTLEKNCNIAMSRLQSLVTENSDLRSKNENF Sbjct: 1021 KDVINSKEEEIKSFNDKLSSSEEDLDIKLVTLEKNCNIAMSRLQSLVTENSDLRSKNENF 1080 Query: 1081 KKEKAALNNQLKNKESELLKMKEKIDNHKKELATFSKQRDDAVSEHGKITAELKETRIQL 1140 KKEKAALNNQLKNKESELLKMKEKIDNHKKELATFSKQRDDAVSEHGKITAELKETRIQL Sbjct: 1081 KKEKAALNNQLKNKESELLKMKEKIDNHKKELATFSKQRDDAVSEHGKITAELKETRIQL 1140 Query: 1141 TEYKSNYQKIKEEYSNFQRETKEQEQKKRNSLVESLNDSKIKELEARLSQEISLNQYLNK 1200 TEYKSNYQKIKEEYSNFQRETKEQEQKKRNSLVESLNDSKIKELEARLSQEISLNQYLNK Sbjct: 1141 TEYKSNYQKIKEEYSNFQRETKEQEQKKRNSLVESLNDSKIKELEARLSQEISLNQYLNK 1200 Query: 1201 RISGNSVETNIXXXXXXXXXXXXPLDKEDIIKKYYDLQLAFTEITRXXXXXXXXXXXXXS 1260 RISGNSVETNI PLDKEDIIKKYYDLQLAFTEITR S Sbjct: 1201 RISGNSVETNISSTRRSTSYSDDPLDKEDIIKKYYDLQLAFTEITRNLENEIEEKKNLIS 1260 Query: 1261 RLRFTETRLASSSFEDXXXXXXXXXXXXXXXDMDPSIPLDSILNEPLDNCPDKESDINKL 1320 RLRFTETRLASSSFED DMDPSIPLDSILNEPLDNCPDKESDINKL Sbjct: 1261 RLRFTETRLASSSFEDQKIKAQMKKLKKLIQDMDPSIPLDSILNEPLDNCPDKESDINKL 1320 Query: 1321 MLEVDYLKRQLDIETRAHYDAENAISALHSKFRKIQGESSLSSSDIYKLKFEASEERVKS 1380 MLEVDYLKRQLDIETRAHYDAENAISALHSKFRKIQGESSLSSSDIYKLKFEASEERVKS Sbjct: 1321 MLEVDYLKRQLDIETRAHYDAENAISALHSKFRKIQGESSLSSSDIYKLKFEASEERVKS 1380 Query: 1381 LEDKLKTMPLRDRTNLPVGDIIKNRDSISKYEEEIRYYKLENYKLQEILNESNGKLSQLT 1440 LEDKLKTMPLRDRTNLPVGDIIKNRDSISKYEEEIRYYKLENYKLQEILNESNGKLSQLT Sbjct: 1381 LEDKLKTMPLRDRTNLPVGDIIKNRDSISKYEEEIRYYKLENYKLQEILNESNGKLSQLT 1440 Query: 1441 LDLRQSKSKEALLSEQLDRLQKDLESTERQKELLSSTIKQQKQQFENCMDDLQGNELRLR 1500 LDLRQSKSKEALLSEQLDRLQKDLESTERQKELLSSTIKQQKQQFENCMDDLQGNELRLR Sbjct: 1441 LDLRQSKSKEALLSEQLDRLQKDLESTERQKELLSSTIKQQKQQFENCMDDLQGNELRLR 1500 Query: 1501 EHIHALKQAEEDVKNMASIIEKLKTQNKQKEKLIWEREMERNDSDMQLQETLLELKRVQD 1560 EHIHALKQAEEDVKNMASIIEKLKTQNKQKEKLIWEREMERNDSDMQLQETLLELKRVQD Sbjct: 1501 EHIHALKQAEEDVKNMASIIEKLKTQNKQKEKLIWEREMERNDSDMQLQETLLELKRVQD 1560 Query: 1561 VKKILSDDLAHLKERLSAVEDRSQYTDEINRLKEELNCSLKAETNLKKEFATLKYKLETS 1620 VKKILSDDLAHLKERLSAVEDRSQYTDEINRLKEELNCSLKAETNLKKEFATLKYKLETS Sbjct: 1561 VKKILSDDLAHLKERLSAVEDRSQYTDEINRLKEELNCSLKAETNLKKEFATLKYKLETS 1620 Query: 1621 TNDSEAKISDLLKQLDHYTKVVEMLNNEKDAISLAEKELYQKYEALNTECESLKGKIVSL 1680 TNDSEAKISDLLKQLDHYTKVVEMLNNEKDAISLAEKELYQKYEALNTECESLKGKIVSL Sbjct: 1621 TNDSEAKISDLLKQLDHYTKVVEMLNNEKDAISLAEKELYQKYEALNTECESLKGKIVSL 1680 Query: 1681 TKIKQELESDLNQKTDALQISNAALSSSTQKNKEITEKIKYLEETLQLQMEQNSRNGELV 1740 TKIKQELESDLNQKTDALQISNAALSSSTQKNKEITEKIKYLEETLQLQMEQNSRNGELV Sbjct: 1681 TKIKQELESDLNQKTDALQISNAALSSSTQKNKEITEKIKYLEETLQLQMEQNSRNGELV 1740 Query: 1741 KTLQASCNGYKDKFDDEKQKNIDLYEENQTLQKLNTDLQLQLKNLHERLSDTTEKNAWLS 1800 KTLQASCNGYKDKFDDEKQKNIDLYEENQTLQKLNTDLQLQLKNLHERLSDTTEKNAWLS Sbjct: 1741 KTLQASCNGYKDKFDDEKQKNIDLYEENQTLQKLNTDLQLQLKNLHERLSDTTEKNAWLS 1800 Query: 1801 KIHELENMVSLETDLKYEEMKKNKSLERAVEELQTKNSQQTDVIELANKNRSEFEEATLK 1860 KIHELENMVSLETDLKYEEMKKNKSLERAVEELQTKNSQQTDVIELANKNRSEFEEATLK Sbjct: 1801 KIHELENMVSLETDLKYEEMKKNKSLERAVEELQTKNSQQTDVIELANKNRSEFEEATLK 1860 Query: 1861 YEAQISDLEKYISQQELEMKKSIRDNSSYRDKVQEMAQEIEFWKSRYESTMIGSKNIDSN 1920 YEAQISDLEKYISQQELEMKKSIRDNSSYRDKVQEMAQEIEFWKSRYESTMIGSKNIDSN Sbjct: 1861 YEAQISDLEKYISQQELEMKKSIRDNSSYRDKVQEMAQEIEFWKSRYESTMIGSKNIDSN 1920 Query: 1921 NAQSKIFS 1928 NAQSKIFS Sbjct: 1921 NAQSKIFS 1928 >SCER-S28-01-000806 ORFP:YDL058W USO1, Chr IV from 345664-351036 Length = 1790 Score = 150 bits (380), Expect = 3e-38 Identities = 200/989 (20%), Positives = 416/989 (42%), Gaps = 109/989 (11%) Query: 860 MTRTKKFNEQINKLKNDL----QEM----ESKKKFLEEKNQKTVNELENTQDLLNQEKEN 911 +++ KK + INK+ DL +EM E+ K +EK++ VN + T+ L KE+ Sbjct: 852 LSQKKKAEDGINKMGKDLFALSREMQAVEENCKNLQKEKDKSNVNHQKETKSL----KED 907 Query: 912 LRKNESLLNRVKTSSETLQKQFDDLVSEKDEISREKLEVAQNLEEAHQKIQGLQETIRER 971 + + + + + E ++ Q ++L EK+ IS+E +E + + L E ++ Sbjct: 908 IAAKITEIKAINENLEEMKIQCNNLSKEKEHISKELVEYKSRFQSHDNLVAKLTEKLKSL 967 Query: 972 EATLEKLHSKNNELIK-----------QISDLNCDISKEQSSQSLIKESKLKLENEIKRL 1020 + + ++N LIK Q+S+L I + + + +E I++L Sbjct: 968 ANNYKDMQAENESLIKAVEESKNESSIQLSNLQNKIDSMSQEKENFQIERGSIEKNIEQL 1027 Query: 1021 KDVINSKEEEIKSFNDKLSSSEEDLDIKLVTLEKNCNIAMSRLQSLVTENSDLRSKNENF 1080 K I+ E+ + K SS+++ + ++ L++ A + V + S+L E Sbjct: 1028 KKTISDLEQTKEEIISKSDSSKDEYESQISLLKEKLETATTANDENVNKISELTKTREEL 1087 Query: 1081 KKEKAALNNQLKNKESELLKMKEKIDNHKKELATFSKQRDDAVSEHGKITAELKETRIQL 1140 + E AA N LKN+ ++ K++ +K L + + E ++ E ET+ QL Sbjct: 1088 EAELAAYKN-LKNE------LETKLETSEKALKEVKENEEHLKEEKIQLEKEATETKQQL 1140 Query: 1141 TEYKSNYQKIKEEYSNFQRETKEQEQKKRNSLVESLNDSKIKELEARLSQEISLNQYLNK 1200 ++N + +++E+ + + K+ E++ N + + E ++L+ EI+ Q N+ Sbjct: 1141 NSLRANLESLEKEHEDLAAQLKKYEEQIANK------ERQYNEEISQLNDEITSTQQENE 1194 Query: 1201 RISGNSVETNIXXXXXXXXXXXXPLDKEDIIKKYYD-LQLAFTEITRXXXXXXXXXXXXX 1259 I + E ++ ++ K D L L E+ + Sbjct: 1195 SIKKKNDELEGEVKAMKSTSE----EQSNLKKSEIDALNLQIKELKKKNETNEASLLESI 1250 Query: 1260 SRLRFTETRLASSSFEDXXXXXXXXXXXXXXXDMDPSIPLDSILNEPLDNCPDKESDINK 1319 + ++ E S L + L DK S + Sbjct: 1251 KSVESETVKIKELQDECNFKEKEV-----------------SELEDKLKASEDKNSKYLE 1293 Query: 1320 LMLEVDYLKRQLDIETRAHYDAENAISALHSKFRKIQGESSLSSSDIYKLKFEASEERVK 1379 L E + +K +LD +T + K + S S++ +LK +SEER K Sbjct: 1294 LQKESEKIKEELDAKT-------TELKIQLEKITNLSKAKEKSESELSRLKKTSSEER-K 1345 Query: 1380 SLEDKLKTMPLRDRTNLPVGDIIKNRDSISK--------YEEEIRYYKLENYKLQEILNE 1431 + E++L+ L++ + K R +++ Y E+I + E +LQ NE Sbjct: 1346 NAEEQLEK--LKNEIQIKNQAFEKERKLLNEGSSTITQEYSEKINTLEDELIRLQ---NE 1400 Query: 1432 SNGKLSQLTLDLRQSKSKEALLS--EQLDRLQKDLESTE-----------RQKELLSSTI 1478 + K ++ D +S+ ++ LS E L+ Q ++S + R E L S Sbjct: 1401 NELKAKEI--DNTRSELEKVSLSNDELLEEKQNTIKSLQDEILSYKDKITRNDEKLLSIE 1458 Query: 1479 KQQKQQFENCMDDLQGNELRLREHIHALKQAEEDVKNMASIIEKLKTQNKQKEKLIWERE 1538 + K+ E+ + L+ + + LK+ EE+ + +EK K K+ E I E Sbjct: 1459 RDNKRDLESLKEQLRAAQESKAKVEEGLKKLEEESSKEKAELEKSKEMMKKLESTIESNE 1518 Query: 1539 MERNDSDMQLQETLLEL-KRVQDVKKILSDDLAHLKERLSAVEDRSQYTD-EINRLKEEL 1596 E S ET+ + ++++ KK +D+ +L+ S + R ++ +I LK +L Sbjct: 1519 TELKSS----METIRKSDEKLEQSKKSAEEDIKNLQHEKSDLISRINESEKDIEELKSKL 1574 Query: 1597 NCSLKAETNL---KKEFATLKYKLETSTNDS---EAKISDLLKQLDHYTKVVEMLNNEKD 1650 K+ + L K+E + K+ + ++ ++K+ D+ ++L ++ EK+ Sbjct: 1575 RIEAKSGSELETVKQELNNAQEKIRINAEENTVLKSKLEDIERELKDKQAEIKSNQEEKE 1634 Query: 1651 AISLAEKELYQKYEALNTECESLKGKIVSLTKIKQELESDLNQKTDALQISNAALSSSTQ 1710 ++ KEL Q+ ++ + + + + + + Q +S L++K L+ L + Q Sbjct: 1635 LLTSRLKELEQELDSTQQKAQKSEEERRAEVRKFQVEKSQLDEKAMLLETKYNDLVNKEQ 1694 Query: 1711 KNKEITEKIKYLEETLQLQMEQNSRNGELVKTLQA---SCNGYKDKFDDEKQKNIDLYEE 1767 K + +K ++ + ++E+ ++ + +K + N + + DD DL E+ Sbjct: 1695 AWKRDEDTVKKTTDSQRQEIEKLAKELDNLKAENSKLKEANEDRSEIDDLMLLVTDLDEK 1754 Query: 1768 NQTLQKLNTDLQLQLKNLHERLSDTTEKN 1796 N + DL +++ + E + E++ Sbjct: 1755 NAKYRSKLKDLGVEISSDEEDDEEDDEED 1783 Score = 150 bits (380), Expect = 3e-38 Identities = 230/1107 (20%), Positives = 477/1107 (43%), Gaps = 138/1107 (12%) Query: 839 KEDPW--FNLFIRIKPLLTSSNDMTRTKKFNEQINKLKNDLQEMESKKKFLEEKNQKTVN 896 KE P+ F I L N +R K+F + K D+ E L+E V Sbjct: 636 KESPFPRKEYFEFITKTLGKDNYASRIKQFKKDSYFSKVDMNEDSILTPELDETGLPKVY 695 Query: 897 ELENTQDLLNQEKENLRK------NESLLNRVKTSS-ETLQKQFDDLVSEKDEISREKLE 949 L N+ +R +E +N++ E LQ+Q L K EI+ + E Sbjct: 696 FSTYFIQLFNENIYRIRTALSHDPDEEPINKISFEEVEKLQRQCTKL---KGEITSLQTE 752 Query: 950 VAQNLEEAHQKIQGLQETIREREATLEKLHSKNNELIKQISDLNCDISKEQSSQSLIKES 1009 E +K+ L +E + + L+S ++ L + S L ++ + S Sbjct: 753 TESTHENLTEKLIALTNEHKELDEKYQILNSSHSSLKENFSILETELKNVRDSL------ 806 Query: 1010 KLKLENEIKRLKDVINSKEEEIKSFNDKLSSSEEDLDIKLVTLEKNCNIAMSRLQSLVTE 1069 +E+ +L+DV+ +K++E ++ + S+ + + TLEK +S+ + Sbjct: 807 -----DEMTQLRDVLETKDKENQTALLEYKSTIHKQEDSIKTLEKGLETILSQKKKAEDG 861 Query: 1070 NSDLRSKNENFKKEKAALNNQLKNKESELLKMKEKIDNHKKELATFSKQRDDAVSEHGKI 1129 + + +E A+ KN + E K K + NH+KE + + ++E I Sbjct: 862 INKMGKDLFALSREMQAVEENCKNLQKE--KDKSNV-NHQKETKSLKEDIAAKITEIKAI 918 Query: 1130 TAELKETRIQLTEYKSNYQKIKEEYSNFQRETKEQEQKKRNSLVESLNDSKIKELEARLS 1189 L+E +IQ +N K KE S E K + Q N LV L + K+K L Sbjct: 919 NENLEEMKIQC----NNLSKEKEHISKELVEYKSRFQSHDN-LVAKLTE-KLKSLANNYK 972 Query: 1190 QEISLNQYLNKRISGNSVETNIXXXXXXXXXXXXPLDKEDIIKKYYDLQLAFTEITRXXX 1249 + N+ L K + + E++I +KE+ + ++ ++ + Sbjct: 973 DMQAENESLIKAVEESKNESSIQLSNLQNKIDSMSQEKENFQIERGSIEKNIEQLKK--- 1029 Query: 1250 XXXXXXXXXXSRLRFTETRLASSSFEDXXXXXXXXXXXXXXXDMDPSIPLDSILNEPLDN 1309 S L T+ + S S D S+L E L+ Sbjct: 1030 --------TISDLEQTKEEIISKS----------------DSSKDEYESQISLLKEKLET 1065 Query: 1310 CPD-KESDINKLMLEVDYLKRQLDIETRAHYDAENAISALHSKFRKIQGESSLSSSDIYK 1368 + ++NK+ E+ + +L+ E A+ + +N + E+ L +S+ Sbjct: 1066 ATTANDENVNKIS-ELTKTREELEAELAAYKNLKNEL------------ETKLETSEKAL 1112 Query: 1369 LKFEASEERVKSLEDKLKTMPLRDRTNLPVGDIIKNRDSISKYEEEIRYYKLENYKLQEI 1428 + + +EE +K E+K++ T + + N +S+ K E++ +L+ Y+ ++I Sbjct: 1113 KEVKENEEHLK--EEKIQLEKEATETKQQLNSLRANLESLEKEHEDLA-AQLKKYE-EQI 1168 Query: 1429 LNES---NGKLSQLTLDLRQSKSKEALLSEQLDRLQKDLE----STERQKELLSSTIKQQ 1481 N+ N ++SQL ++ ++ + + ++ D L+ +++ ++E Q L S I Sbjct: 1169 ANKERQYNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDAL 1228 Query: 1482 KQQFENCMDDLQGNELRLREHIHA-------LKQAEEDV----KNMASIIEKLK-TQNKQ 1529 Q + + NE L E I + +K+ +++ K ++ + +KLK +++K Sbjct: 1229 NLQIKELKKKNETNEASLLESIKSVESETVKIKELQDECNFKEKEVSELEDKLKASEDKN 1288 Query: 1530 KEKLIWEREME--RNDSDMQLQETLLELKRVQDVKKI---LSDDLAHLKERLSAVEDRSQ 1584 + L ++E E + + D + E ++L+++ ++ K +L+ LK+ S E+R Sbjct: 1289 SKYLELQKESEKIKEELDAKTTELKIQLEKITNLSKAKEKSESELSRLKKTSS--EERKN 1346 Query: 1585 YTDEINRLKEEL---NCSLKAETNLKKE-FATLKYKLETSTNDSEAKISDLLKQLDHYTK 1640 +++ +LK E+ N + + E L E +T+ + N E ++ L + + K Sbjct: 1347 AEEQLEKLKNEIQIKNQAFEKERKLLNEGSSTITQEYSEKINTLEDELIRLQNENELKAK 1406 Query: 1641 VVEMLNNEKDAISLAEKELYQK----YEALNTECESLKGKIVSLTKIKQELESDLNQKTD 1696 ++ +E + +SL+ EL ++ ++L E S K KI + +E D + + Sbjct: 1407 EIDNTRSELEKVSLSNDELLEEKQNTIKSLQDEILSYKDKITRNDEKLLSIERDNKRDLE 1466 Query: 1697 ALQISNAALSSSTQKNKEITEKIKYLEETLQLQMEQNSRNGELVKTLQASCNGYKDKFDD 1756 +L+ L ++ + ++ E +K LEE + + ++ E++K L+++ Sbjct: 1467 SLK---EQLRAAQESKAKVEEGLKKLEEESSKEKAELEKSKEMMKKLESTI--------- 1514 Query: 1757 EKQKNIDLYEENQTLQKLNTDLQLQLKNLHERLSDTT-EKNAWLSKIHELE-NMVSLETD 1814 + +L +T++K + L+ K+ E + + EK+ +S+I+E E ++ L++ Sbjct: 1515 -ESNETELKSSMETIRKSDEKLEQSKKSAEEDIKNLQHEKSDLISRINESEKDIEELKSK 1573 Query: 1815 LKYEEMKKNKSLERAVEELQTKNSQQTDVIELANKNRSEFEEATLKYEAQISDLEKYISQ 1874 L+ E K LE +EL N+Q+ K R EE T+ ++++ D+E+ + Sbjct: 1574 LRI-EAKSGSELETVKQEL--NNAQE--------KIRINAEENTV-LKSKLEDIERELKD 1621 Query: 1875 QELEMKKSIRDNSSYRDKVQEMAQEIE 1901 ++ E+K + + +++E+ QE++ Sbjct: 1622 KQAEIKSNQEEKELLTSRLKELEQELD 1648 Score = 96.7 bits (239), Expect = 6e-22 Identities = 110/487 (22%), Positives = 226/487 (46%), Gaps = 50/487 (10%) Query: 746 KLKASTKQNCEFLLTSLQLDTKVYK----IGNTKLFFKAGVLADLEKQKDVKLNNIMIKL 801 KLKAS +N ++L LQ +++ K T+L + + +L K K+ K + + +L Sbjct: 1280 KLKASEDKNSKYL--ELQKESEKIKEELDAKTTELKIQLEKITNLSKAKE-KSESELSRL 1336 Query: 802 TATIRGYTVRKEITYHLQKLKKTRVIGNTFRLYNRLVKEDPWFNLFIRIKPLLTSSNDMT 861 T RK L+KLK N ++ N+ +++ L + T Sbjct: 1337 KKT--SSEERKNAEEQLEKLK------NEIQIKNQAFEKER----------KLLNEGSST 1378 Query: 862 RTKKFNEQINKLKNDLQEMESKKKFLEEKNQKTVNELENTQDLLNQEKENLRKNESLLNR 921 T++++E+IN L+++L L+ +N+ E++NT+ L EK +L N+ LL Sbjct: 1379 ITQEYSEKINTLEDELIR-------LQNENELKAKEIDNTRSEL--EKVSL-SNDELLEE 1428 Query: 922 VKTSSETLQKQFDDLVSEKDEISREKLEVAQNLEEAHQKIQGLQETIREREATLEKLHSK 981 + + ++LQ D+++S KD+I+R ++ + + ++ L+E +R + + K+ Sbjct: 1429 KQNTIKSLQ---DEILSYKDKITRNDEKLLSIERDNKRDLESLKEQLRAAQESKAKVE-- 1483 Query: 982 NNELIKQISDLNCDISKEQSSQSLIKESKLKLENEIKRLKDVINSKEEEIKSFNDKLSSS 1041 E +K++ + + SKE++ KE KLE+ I+ + + S E I+ ++KL S Sbjct: 1484 --EGLKKLEE---ESSKEKAELEKSKEMMKKLESTIESNETELKSSMETIRKSDEKLEQS 1538 Query: 1042 EEDLDIKLVTLEKNCNIAMSRLQSLVTENSDLRSKNENFKKEKAALNNQLKNKESELLKM 1101 ++ + + L+ + +SR+ + +L+SK + +A ++L+ + EL Sbjct: 1539 KKSAEEDIKNLQHEKSDLISRINESEKDIEELKSK----LRIEAKSGSELETVKQELNNA 1594 Query: 1102 KEKIDNHKKELATFSKQRDDAVSEHGKITAELKETRIQLTEYKSNYQKIKEEYSNFQRET 1161 +EKI + +E + +D E AE+K + + S +++++E + Q++ Sbjct: 1595 QEKIRINAEENTVLKSKLEDIERELKDKQAEIKSNQEEKELLTSRLKELEQELDSTQQKA 1654 Query: 1162 KEQEQKKRNSLVESLNDSKIKELEARLSQEISLNQYLNKRISGNSVETNIXXXXXXXXXX 1221 ++ E+++R + V K + E + E N +NK + E + Sbjct: 1655 QKSEEERR-AEVRKFQVEKSQLDEKAMLLETKYNDLVNKEQAWKRDEDTVKKTTDSQRQE 1713 Query: 1222 XXPLDKE 1228 L KE Sbjct: 1714 IEKLAKE 1720 Score = 92.0 bits (227), Expect = 2e-20 Identities = 136/603 (22%), Positives = 269/603 (44%), Gaps = 68/603 (11%) Query: 1363 SSDIYKLKFEASEERVKSLEDKLKTMPLRDRTNLPV------------GDIIKNRDSISK 1410 +S I + K ++ +V ED + T P D T LP +I + R ++S Sbjct: 659 ASRIKQFKKDSYFSKVDMNEDSILT-PELDETGLPKVYFSTYFIQLFNENIYRIRTALSH 717 Query: 1411 YEEEIRYYKLENYKLQEILNESNGKLSQLTLDLRQSKSKEALLSEQLDRLQKDLESTERQ 1470 +E K+ +++++ + ++T +++S L+E+L L + + + + Sbjct: 718 DPDEEPINKISFEEVEKLQRQCTKLKGEITSLQTETESTHENLTEKLIALTNEHKELDEK 777 Query: 1471 KELLSSTIKQQKQQFENCMDDLQGNELRLREHIHALKQAE-EDVKNMASIIEKLKTQNKQ 1529 ++L+S+ K+ F +L+ L E E +D +N +++E T +KQ Sbjct: 778 YQILNSSHSSLKENFSILETELKNVRDSLDEMTQLRDVLETKDKENQTALLEYKSTIHKQ 837 Query: 1530 KEKLIWEREMERNDSDMQLQETLLELKRVQDVKKILSDDLAHLKERLSAVEDRSQYTDEI 1589 ++ + + +E+ L+ L + K+ +D + DL L + AVE+ + + Sbjct: 838 EDSI---KTLEKG-----LETILSQKKKAEDGINKMGKDLFALSREMQAVEENCK---NL 886 Query: 1590 NRLKEELNCSLKAETNLKKEFATLKYKLETSTNDS--EAKI--SDLLKQLDHYTK-VVEM 1644 + K++ N + + ET KE K + N++ E KI ++L K+ +H +K +VE Sbjct: 887 QKEKDKSNVNHQKETKSLKEDIAAKITEIKAINENLEEMKIQCNNLSKEKEHISKELVEY 946 Query: 1645 LNNEKDAISLAEKELYQKYEALNTECESLKGKIVSLTKIKQELESDLNQKTDALQISNAA 1704 + + +L K L +K ++L + ++ + SL K +E +++ + + LQ + Sbjct: 947 KSRFQSHDNLVAK-LTEKLKSLANNYKDMQAENESLIKAVEESKNESSIQLSNLQNKIDS 1005 Query: 1705 LSSSTQ----KNKEITEKIKYLEETLQLQMEQNSRNGELVKTLQASCNGY-------KDK 1753 +S + + I + I+ L++T+ +EQ E++ +S + Y K+K Sbjct: 1006 MSQEKENFQIERGSIEKNIEQLKKTIS-DLEQTKE--EIISKSDSSKDEYESQISLLKEK 1062 Query: 1754 FDDEKQKNIDLYEENQTLQKLNTDLQLQL---KNLHERLS---DTTEKNAWLSKIHELEN 1807 + N + + L K +L+ +L KNL L +T+EK L+ Sbjct: 1063 LETATTANDENVNKISELTKTREELEAELAAYKNLKNELETKLETSEK--------ALKE 1114 Query: 1808 MVSLETDLKYEEMKKNKSLERAVEELQTKNSQQTDVIELANKNRSEFEEATLKYEAQISD 1867 + E LK E+++ K A E Q NS + + +E K + KYE QI++ Sbjct: 1115 VKENEEHLKEEKIQLEKE---ATETKQQLNSLRAN-LESLEKEHEDLAAQLKKYEEQIAN 1170 Query: 1868 LEKY----ISQQELEMKKSIRDNSSYRDKVQEMAQEIEFWKS-RYESTMIGSKNIDSNNA 1922 E+ ISQ E+ + ++N S + K E+ E++ KS E + + ID+ N Sbjct: 1171 KERQYNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDALNL 1230 Query: 1923 QSK 1925 Q K Sbjct: 1231 QIK 1233 Score = 87.0 bits (214), Expect = 5e-19 Identities = 103/461 (22%), Positives = 208/461 (45%), Gaps = 63/461 (13%) Query: 727 FQRYRILYPENSTTTTFSSKLKASTKQNCEFLLTSLQLDTKVYKIGNTKLFFKAGVLADL 786 F++ R L E S+T T K +T ++ E + + + K +I NT+ ++L Sbjct: 1365 FEKERKLLNEGSSTITQEYSEKINTLED-ELIRLQNENELKAKEIDNTR--------SEL 1415 Query: 787 EKQKDVKLNN--IMIKLTATIRGYTVRKEITYHLQKLKKTRVIGNTFRLYNRLVKEDPWF 844 EK V L+N ++ + TI+ +++ EI + K+ + N +L + ++ D Sbjct: 1416 EK---VSLSNDELLEEKQNTIK--SLQDEILSYKDKITR-----NDEKLLS--IERD--- 1460 Query: 845 NLFIRIKPLLTSSNDMTRTKKFNEQINKLKNDLQEMESKKKFLEEKNQKTVNELENT--- 901 + L + + ++ ++ + L+E SK+K EK+++ + +LE+T Sbjct: 1461 ----NKRDLESLKEQLRAAQESKAKVEEGLKKLEEESSKEKAELEKSKEMMKKLESTIES 1516 Query: 902 -QDLLNQEKENLRKNESLLNRVKTSSE----TLQKQFDDLVS-----EKD-EISREKLEV 950 + L E +RK++ L + K S+E LQ + DL+S EKD E + KL + Sbjct: 1517 NETELKSSMETIRKSDEKLEQSKKSAEEDIKNLQHEKSDLISRINESEKDIEELKSKLRI 1576 Query: 951 ----AQNLEEAHQKIQGLQETIREREATLEKLHSKNNELIKQISDLNCDISKEQSSQSLI 1006 LE Q++ QE IR L SK ++ +++ D +I Q + L+ Sbjct: 1577 EAKSGSELETVKQELNNAQEKIRINAEENTVLKSKLEDIERELKDKQAEIKSNQEEKELL 1636 Query: 1007 KESKLKLENEIKRLKDVINSKEEEIKSFNDKLSSSEEDLDIKLVTLEKNCNIAMSRLQSL 1066 +LE E+ + EEE ++ K + LD K + LE Sbjct: 1637 TSRLKELEQELDSTQQKAQKSEEERRAEVRKFQVEKSQLDEKAMLLE------------- 1683 Query: 1067 VTENSDLRSKNENFKKEKAALNNQLKNKESELLKMKEKIDNHKKELATFSKQRDDAVSEH 1126 T+ +DL +K + +K+++ + ++ E+ K+ +++DN K E + + +D SE Sbjct: 1684 -TKYNDLVNKEQAWKRDEDTVKKTTDSQRQEIEKLAKELDNLKAENSKLKEANEDR-SEI 1741 Query: 1127 GKITAELKETRIQLTEYKSNYQKIKEEYSNFQRETKEQEQK 1167 + + + + +Y+S + + E S+ + + +E +++ Sbjct: 1742 DDLMLLVTDLDEKNAKYRSKLKDLGVEISSDEEDDEEDDEE 1782 Score = 85.9 bits (211), Expect = 1e-18 Identities = 114/507 (22%), Positives = 225/507 (44%), Gaps = 67/507 (13%) Query: 746 KLKASTKQNCEFLLTSLQLDTKVYKIGNTKLFFKAGVLADLEKQKDVKLNNIMIKLTAT- 804 K TKQ L +L+ K ++ +L +A+ E+Q + +++ + ++T+T Sbjct: 1131 KEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIANKERQYNEEISQLNDEITSTQ 1190 Query: 805 ------------IRGYTVRKEITYHLQK-LKKTRVIGNTFRLYNRLVKEDPWFNLFIRIK 851 + G + T Q LKK+ + + L + +K+ N ++ Sbjct: 1191 QENESIKKKNDELEGEVKAMKSTSEEQSNLKKSEI--DALNLQIKELKKKNETNEASLLE 1248 Query: 852 PLLTSSNDMTRTKKFNEQINKLKNDLQEMESKKKFLEEKNQKTVNELENTQDLLNQEKE- 910 + + ++ + K+ ++ N + ++ E+E K K E+KN K + EL+ + + +E + Sbjct: 1249 SIKSVESETVKIKELQDECNFKEKEVSELEDKLKASEDKNSKYL-ELQKESEKIKEELDA 1307 Query: 911 -------------NL----RKNESLLNRV-KTSSETLQKQFDDLVSEKDE--ISREKLEV 950 NL K+ES L+R+ KTSSE + + L K+E I + E Sbjct: 1308 KTTELKIQLEKITNLSKAKEKSESELSRLKKTSSEERKNAEEQLEKLKNEIQIKNQAFEK 1367 Query: 951 AQNL--EEAHQKIQGLQETIREREATLEKLHSKNNELIKQISDLNCDISKEQSSQSLIKE 1008 + L E + Q E I E L +L ++N K+I + ++ K S + E Sbjct: 1368 ERKLLNEGSSTITQEYSEKINTLEDELIRLQNENELKAKEIDNTRSELEKVSLSNDELLE 1427 Query: 1009 SKLKLENEIKRLKDVINSKEEEIKSFNDKLSSSEEDLDIKLVTLEKNCNIAMSR------ 1062 K +N IK L+D I S +++I ++KL S E D L +L++ A Sbjct: 1428 EK---QNTIKSLQDEILSYKDKITRNDEKLLSIERDNKRDLESLKEQLRAAQESKAKVEE 1484 Query: 1063 -LQSLVTENSDLRSKNENFKKEKAALNNQLKNKESEL-------LKMKEKIDNHKK---- 1110 L+ L E+S +++ E K+ L + +++ E+EL K EK++ KK Sbjct: 1485 GLKKLEEESSKEKAELEKSKEMMKKLESTIESNETELKSSMETIRKSDEKLEQSKKSAEE 1544 Query: 1111 ELATFSKQRDDAVSEHGKITAELKETRIQL---TEYKSNYQKIKEEYSNFQRETK---EQ 1164 ++ ++ D +S + +++E + +L + S + +K+E +N Q + + E+ Sbjct: 1545 DIKNLQHEKSDLISRINESEKDIEELKSKLRIEAKSGSELETVKQELNNAQEKIRINAEE 1604 Query: 1165 EQKKRNSLVESLNDSKIKELEARLSQE 1191 ++ L + + K K+ E + +QE Sbjct: 1605 NTVLKSKLEDIERELKDKQAEIKSNQE 1631 >MGEN-G37-01-000221 MG218 cytadherence accessory protein (hmw2) Length = 1805 Score = 125 bits (315), Expect = 1e-30 Identities = 238/1173 (20%), Positives = 491/1173 (41%), Gaps = 210/1173 (17%) Query: 867 NEQINKLKNDLQEMESKKKFLEEKNQKTVNE-LENTQDLLNQEKENLRKN---ESLLNRV 922 NE K + L ++E++ K L+ K + NE +++LLNQE+E K ++LL + Sbjct: 368 NEFEQKQSDSLLKLETEYKALQHKINEFKNESATKSEELLNQERELFEKRREIDTLLTQA 427 Query: 923 KTSSETLQKQFDDLVSEKD----------EISREKLEVAQNLEEAHQKIQG-----LQET 967 E Q++ L+ +K E ++++L+ +NL + +K+ L+E Sbjct: 428 SLEYEH-QRESSQLLKDKQNEVKQHFQNLEYAKKELDKERNLLDQQKKVDSEAIFQLKEK 486 Query: 968 IREREATLEKLH--------SKNNELI---KQISDLNCDISKE-QSSQSLIKESKLKLEN 1015 + + LE+L+ K NEL+ KQ+ D E ++ Q + E+K LE Sbjct: 487 VAQERKELEELYLVKKQKQDQKENELLFFEKQLKQHQADFENELEAKQQELFEAKHALER 546 Query: 1016 EIKRLKDV---INSKEEEIKS-FNDKLSSSEEDLDIKLVTLEKNCNIAMSRLQSLVTENS 1071 +L+D +N+K ++I + F+ + + D +L+ + ++L E Sbjct: 547 SFIKLEDKEKDLNTKAQQIANEFSQLKTDKSKSADFELML--------QNEYENLQQEKQ 598 Query: 1072 DLRSKNENFKKEKAALNNQLKNKESELLKMKEKIDNHKKELATFSKQRDDAVSEHGKITA 1131 L + F++ A L+N+L+ K ELL+ KE +D K +F ++R EH ++ A Sbjct: 599 KLFQERTYFERNAAVLSNRLQQKREELLQQKETLDQLTK---SFEQERLINQREHKELVA 655 Query: 1132 ELKETR----IQLTEYKSNYQKIKEEYSNFQRETKEQEQKKRNSLVESLND-SKIKELEA 1186 +++ + +L ++ + + + K +E++ + + LND + + ++A Sbjct: 656 SVEKQKEILGKKLQDFSQTSLNASKNLAEREMAIKFKEKEIEATEKQLLNDVNNAEVIQA 715 Query: 1187 RLSQEISLNQYLN-KRISGNSVETNIXXXXXXXXXXXXPLDKEDIIKKYYDLQLAFTEIT 1245 L+Q LNQ LN +R + + I D +KK + +L+ + Sbjct: 716 DLAQ---LNQSLNQERSELQNAKQRIADF------------HNDSLKKLNEYELSLQK-- 758 Query: 1246 RXXXXXXXXXXXXXSRLRFTETRLASSS---------FEDXXXXXXXXXXXXXXXDMDPS 1296 RL+ +T A+ FE + Sbjct: 759 ---------------RLQELQTLEANQKQHSYQNQAYFEGELDKLNREKQAFLNLRKKQT 803 Query: 1297 IPLDSILNEPLDNCPDKESDINKLMLEVDYLKRQLDIETRAHYDAENAISALHSKFRKIQ 1356 + +D+I DK +N E+D +L+ H + ++ + ++ Q Sbjct: 804 MEVDAI----KQRLSDKHQALNMQQAELDRKTHELNNAFLNHDADQKSLQDQLATVKETQ 859 Query: 1357 GESSLSSSDIYKLKFEASE----------------ERVKSLEDKLKTMPLRDRTNLPV-- 1398 L S + + + E +E +++ L K ++ + T L + Sbjct: 860 KLIDLERSALLEKQREFAENVAGFKRHWSNKTSQLQKIYELTKKQESEQTQKETELKIAF 919 Query: 1399 GDIIKNRDSIS-KYEEEIRYYKLENYKLQEILNESNGKLSQLTLDLRQSKSKEALLSEQL 1457 D+ K+ + ++E R + + +L ++ ++N Q+ L+L +AL +++ Sbjct: 920 SDLQKDYQVFELQKDQEFRQIEAKQRELDKLAEKNN----QVKLEL--DNRFQALQNQKQ 973 Query: 1458 DRLQKDLESTERQKEL---------LSSTIKQQKQQFENCMDDLQGNELRLREHIHALKQ 1508 D +Q LE Q +L + ++ +Q++Q + EL+ R ALK Sbjct: 974 DTVQAQLELEREQHQLNLEQTAFNQANESLLKQREQLTKKIQAFH-YELKKRNQFLALKG 1032 Query: 1509 AEEDVKNMASIIEKLKTQNKQKEKLIW---EREMERNDSDMQLQETLLELKRVQDVKKIL 1565 + K + Q ++ +++ W + E E D D + L EL++++ Sbjct: 1033 KR--------LFAKEQDQQRKDQEINWRFKQFEKEYTDFDEAKKRELEELEKIRRSLSQS 1084 Query: 1566 SDDLAHLKERLS---AVEDRSQYTDEINRLKEELNCSLKAETNLKKEFATLKYKLETSTN 1622 + +L +E+L+ ++ Q+ +INR ++LN + ++F + + +N Sbjct: 1085 NVELERKREKLATDFTNLNKVQHNTQINR--DQLNSQI-------RQFLLERKNFQRFSN 1135 Query: 1623 DSEAKISDLLKQLDHYTKVVEMLNNEKDAISLAEKELYQKYEALNTECESLKGKIVSLTK 1682 ++ AK + L+K+L + +++ +K+A+++ + E ++ E E + ++ Sbjct: 1136 EANAKKAFLIKRLRSFASNLKL---QKEALAIQKLEFDKRDEQQKKELQQATLQLEQFKF 1192 Query: 1683 IKQELESDLNQKTDALQISNAALSSSTQKNKEITEKIKYLEETL----------QLQMEQ 1732 KQ + + ++ A++ LS + + ++K L +T Q Q++Q Sbjct: 1193 EKQNFDIEKQRQLVAIKTQCEKLSDEKKALNQKLVELKNLSQTYLANKNKAEYSQQQLQQ 1252 Query: 1733 NSRNGELVKTLQASCNGYKDKFDDEKQKNI---------DL-YEENQTL--QKLNTDLQL 1780 N + L+ + KD+ D+K ++I DL +E+ Q L Q++ D Sbjct: 1253 KYTN---LLDLKENLERTKDQL-DKKHRSIFARLTKFANDLRFEKKQLLKAQRIVDDKNR 1308 Query: 1781 QLK----NLHERLSDTTEKNAWL-SKIHELENMVSLETD---LKYEEMKKNK-SLERAVE 1831 LK NLH ++T K A L +I E TD ++E+KK + L++ + Sbjct: 1309 LLKENERNLHFLSNETERKRAVLEDQISYFEKQRKQATDAILASHKEVKKKEGELQKLLV 1368 Query: 1832 ELQTKNSQQTDVIELANKNRSEFEEATLKYEAQISDLEKYISQQELEMKKSIRDNSSYRD 1891 EL+T+ ++ + ++ R EFE LK LE++K+++ ++ + Sbjct: 1369 ELETRKTKLNNDFAKFSRQREEFENQRLKL---------------LELQKTLQTQTNSNN 1413 Query: 1892 KVQEMAQEIE-FWKSRYESTMIGSKNIDSNNAQ 1923 + QEIE +K E K D N ++ Sbjct: 1414 FKTKAIQEIENSYKRGMEELNFQKKEFDKNKSR 1446 Score = 116 bits (291), Expect = 6e-28 Identities = 215/1117 (19%), Positives = 445/1117 (39%), Gaps = 166/1117 (14%) Query: 871 NKLKNDLQEMESKKKFLEEKNQKTVNELENTQDLLNQEKENLRKNESL------LNRVKT 924 N+ K D+ ++E++ L ++ + +EL+N + L NQ ++N ++ + LNR+ Sbjct: 30 NRSKTDVDKIENQ---LLKEIKSLEDELKNLKGLKNQAEDNPELDKKINHLEVDLNRLVN 86 Query: 925 SSETLQKQFDDLVSE-----------KDEISREKLEVAQNLEEAHQKIQGLQETIREREA 973 + Q Q + +V + K+E++R + E A L + + Q + Sbjct: 87 EYKNFQFQKNHMVDKVSELDNLTRFYKNELTRLQQENADFLNSKYANLANFQANYHNKLN 146 Query: 974 TLEKLHSKNNELIKQISDLNCDISKEQSSQSLIKESKLKLENEIKRLKDVINSKEEEIKS 1033 +L N+ I +++ K +Q+LI + L+N ++ K+ + + Sbjct: 147 DFHRLIENQNQTINRLNQ------KINGNQNLIDNNVALLQNP-----NITVEKKNYLLN 195 Query: 1034 FNDKLSSSEEDLDI--KLVTLEKNCNIAMSRLQSLVTENSDLRSKNENFKKEKAALNNQL 1091 D+L + + L+ +L+++E + + LV+ +++L++ EN + + +Q Sbjct: 196 VIDQLYNELDQLENQKRLLSIEYE-----NTYRELVSADNELQNVYENIDQNQIQFKHQY 250 Query: 1092 KNKESELLKMKEKIDNHKKELATFSKQRDDAVSEHGKITAELKETRIQLTEYKSNYQKIK 1151 + EL +++ KI K+EL V + + ++ + + + + Sbjct: 251 QTYRDELSQLERKIQLTKQEL----------VDKESALRVKIDDADFYINARLAELDDVA 300 Query: 1152 EEYSNFQRETKEQEQKKRNSLV------ESLNDSKIKELEARLSQEISLNQYLNKR-ISG 1204 ++ S TK+ Q + LV + LN K R S I +N+ + + Sbjct: 301 KQLSFQDGITKQNAQHVEDKLVALNKEKDRLNTQKEAFFNLRQSALIDINKLQQENELFA 360 Query: 1205 NSVETNIXXXXXXXXXXXXPLDKEDIIKKYYDLQLAFTEITRXXXXXXXXXXXXXSRL-- 1262 +E L+ E Y LQ E L Sbjct: 361 KHLEHQQNEFEQKQSDSLLKLETE-----YKALQHKINEFKNESATKSEELLNQERELFE 415 Query: 1263 --RFTETRLASSSFEDXXXXXXXXXXXXXXXDMDPSIPLDSILNEPLDNCPDKESDINKL 1320 R +T L +S E E DK++++ + Sbjct: 416 KRREIDTLLTQASLEYEHQ------------------------RESSQLLKDKQNEVKQH 451 Query: 1321 MLEVDYLKRQLDIETRAHYDAENAISALHSKFRKIQGESSLSSSDIYKLKFEASEERVKS 1380 ++Y K++LD E + S + ++ + ++Y +K + +++ Sbjct: 452 FQNLEYAKKELDKERNLLDQQKKVDSEAIFQLKEKVAQERKELEELYLVKKQKQDQKENE 511 Query: 1381 L---EDKLKTMPLRDRTNLPVGDIIKNRDSI-SKYEEEIRYYKLE------NYKLQEILN 1430 L E +LK L K ++ +K+ E + KLE N K Q+I N Sbjct: 512 LLFFEKQLKQHQADFENELEA----KQQELFEAKHALERSFIKLEDKEKDLNTKAQQIAN 567 Query: 1431 ESNGKLSQLTLDLRQSKSKEALLSEQLDRLQKDLEST-------ERQKELLSSTIKQQKQ 1483 E SQL D +S E +L + + LQ++ + ER +LS+ ++Q+++ Sbjct: 568 E----FSQLKTDKSKSADFELMLQNEYENLQQEKQKLFQERTYFERNAAVLSNRLQQKRE 623 Query: 1484 ---QFENCMDDL-----QGNELRLREHIHALKQAEEDVKNMASIIEKLKTQNKQKEKLIW 1535 Q + +D L Q + REH + E+ + + ++ + K + Sbjct: 624 ELLQQKETLDQLTKSFEQERLINQREHKELVASVEKQKEILGKKLQDFSQTSLNASKNLA 683 Query: 1536 EREMERNDSDMQLQETLLELKRVQDVKKILSDDLAHLKERLSAVEDRSQYTDEINRLKEE 1595 EREM + +++ T +L + +++ DLA L + L+ ++RS+ + R+ + Sbjct: 684 EREMAIKFKEKEIEATEKQLLNDVNNAEVIQADLAQLNQSLN--QERSELQNAKQRIADF 741 Query: 1596 LNCSLKAETNLKKEFATLKYKLETSTNDSEAKISDLLKQLDHYTKVVEMLNNEKDA-ISL 1654 N SLK + E + K E T ++ K Q ++ ++ LN EK A ++L Sbjct: 742 HNDSLKKLN--EYELSLQKRLQELQTLEANQKQHSYQNQA-YFEGELDKLNREKQAFLNL 798 Query: 1655 AEKELYQKYEALNTECESLKGKIVSLTKIKQELESDLNQKTDALQISNAALSSSTQKNKE 1714 +K+ E +++K ++ + +++L++KT +++NA L+ + K Sbjct: 799 RKKQ--------TMEVDAIKQRLSDKHQALNMQQAELDRKTH--ELNNAFLNHDADQ-KS 847 Query: 1715 ITEKIKYLEETLQLQMEQNSRNGELVKTLQASCNGYKDKFDDEKQKNIDLYE-----ENQ 1769 + +++ ++ET +L + S E + + G+K + ++ + +YE E++ Sbjct: 848 LQDQLATVKETQKLIDLERSALLEKQREFAENVAGFKRHWSNKTSQLQKIYELTKKQESE 907 Query: 1770 TLQKLNTDLQLQLKNLH-----------ERLSDTTEKNAWLSKIHELENMVSLETDLKYE 1818 QK T+L++ +L + K L K+ E N V LE D +++ Sbjct: 908 QTQK-ETELKIAFSDLQKDYQVFELQKDQEFRQIEAKQRELDKLAEKNNQVKLELDNRFQ 966 Query: 1819 EMKKNK--------SLERAVEELQTKNSQQTDVIELANKNRSEFEEATLKYEAQISDLEK 1870 ++ K LER +L N +QT + + E+ T K +A +L+K Sbjct: 967 ALQNQKQDTVQAQLELEREQHQL---NLEQTAFNQANESLLKQREQLTKKIQAFHYELKK 1023 Query: 1871 YISQQELEMKKSIRDNSSYRDKVQEMAQEIEFWKSRY 1907 L+ K+ + K QE+ + ++ Y Sbjct: 1024 RNQFLALKGKRLFAKEQDQQRKDQEINWRFKQFEKEY 1060 Score = 104 bits (260), Expect = 2e-24 Identities = 251/1253 (20%), Positives = 513/1253 (40%), Gaps = 179/1253 (14%) Query: 767 KVYKIGNTKLFFKAGVLADLEKQKDVKLNNIMIKLTATIRGYTVRKEITYHLQKLKKTRV 826 KV ++ N F+K L L+++ LN+ L + YH + R+ Sbjct: 101 KVSELDNLTRFYK-NELTRLQQENADFLNSKYANLA--------NFQANYHNKLNDFHRL 151 Query: 827 IGNTFRLYNRL-VKEDPWFNLFIRIKPLLTSSNDMTRTKKFN-EQINKLKNDLQEMESKK 884 I N + NRL K + NL LL + N K + I++L N+L ++E++K Sbjct: 152 IENQNQTINRLNQKINGNQNLIDNNVALLQNPNITVEKKNYLLNVIDQLYNELDQLENQK 211 Query: 885 KFLEEKNQKTVNELENTQDLLNQEKENLRKNESLLNRVKTSSETLQKQFDDLVSEKDEIS 944 + L + + T EL + + L EN+ +N+ + K +T + D+L + +I Sbjct: 212 RLLSIEYENTYRELVSADNELQNVYENIDQNQI---QFKHQYQTYR---DELSQLERKIQ 265 Query: 945 REKLEVAQNLEEAHQKIQGLQETIREREATLE---KLHSKNNELIKQ----ISDLNCDIS 997 K E+ KI I R A L+ K S + + KQ + D ++ Sbjct: 266 LTKQELVDKESALRVKIDDADFYINARLAELDDVAKQLSFQDGITKQNAQHVEDKLVALN 325 Query: 998 KEQSSQSLIKESKLKLENEIKRLKDVINSKEEEIKSFNDKLSSSEEDLDIKLVTLEKNCN 1057 KE+ + KE+ L L D IN ++E + F L + + + K Sbjct: 326 KEKDRLNTQKEAFFNLRQ--SALID-INKLQQENELFAKHLEHQQNEFEQK--------- 373 Query: 1058 IAMSRLQSLVTENSDLRSKNENFKKEKAALNNQLKNKESELLKMKEKIDNHKKELA-TFS 1116 L L TE L+ K FK E A + +L N+E EL + + +ID + + + Sbjct: 374 -QSDSLLKLETEYKALQHKINEFKNESATKSEELLNQERELFEKRREIDTLLTQASLEYE 432 Query: 1117 KQRDDAVSEHGKITAELKETRIQLTEYKSNYQKIKEEYSNFQRETKEQEQKKRNSL---- 1172 QR+ + QL + K N ++K+ + N + KE + K+RN L Sbjct: 433 HQRESS----------------QLLKDKQN--EVKQHFQNLEYAKKELD-KERNLLDQQK 473 Query: 1173 -VESLNDSKIKELEARLSQEISLNQYLNKRISGNSVETNIXXXXXXXXXXXXPLDKE--- 1228 V+S ++KE A+ +E+ YL K+ + E + + E Sbjct: 474 KVDSEAIFQLKEKVAQERKELE-ELYLVKKQKQDQKENELLFFEKQLKQHQADFENELEA 532 Query: 1229 ---DIIKKYYDLQLAFTEI---TRXXXXXXXXXXXXXSRLRFTETRLA------SSSFED 1276 ++ + + L+ +F ++ + S+L+ +++ A + +E+ Sbjct: 533 KQQELFEAKHALERSFIKLEDKEKDLNTKAQQIANEFSQLKTDKSKSADFELMLQNEYEN 592 Query: 1277 XXXXXXXXXXXXXXXDMDPSIPLDSILNEPLDNCPDKESDINKLMLEVDYLKRQLDIETR 1336 + + ++ + + + + KE+ +D L + + E Sbjct: 593 LQQEKQKLFQERTYFERNAAVLSNRLQQKREELLQQKET--------LDQLTKSFEQERL 644 Query: 1337 AHYDAENAISALHSKFRKIQG-------ESSLSSSDIYKLKFEASEERVKSLEDKLKTMP 1389 + + A K ++I G ++SL++S + A + + K +E K + Sbjct: 645 INQREHKELVASVEKQKEILGKKLQDFSQTSLNASKNLAEREMAIKFKEKEIEATEKQL- 703 Query: 1390 LRDRTNLPV--GDIIKNRDSISKYEEEIRYYKLENYKLQEILNESNGKLSQLTLDLRQ-- 1445 L D N V D+ + S+++ E++ K ++ + N+S KL++ L L++ Sbjct: 704 LNDVNNAEVIQADLAQLNQSLNQERSELQNAK---QRIADFHNDSLKKLNEYELSLQKRL 760 Query: 1446 -------------SKSKEALLSEQLDRLQKDLESTERQKELLSSTIKQQKQQFENCMDDL 1492 S +A +LD+L ++ ++ ++ + + KQ+ + L Sbjct: 761 QELQTLEANQKQHSYQNQAYFEGELDKLNREKQAFLNLRKKQTMEVDAIKQRLSDKHQAL 820 Query: 1493 QGNELRLREHIHALKQA--EEDVKNMASIIEKLKTQNKQKEKLIWEREMERNDSDMQLQE 1550 + L H L A D + S+ ++L T K+ +KLI ++ER+ Sbjct: 821 NMQQAELDRKTHELNNAFLNHDA-DQKSLQDQLATV-KETQKLI---DLERS-------- 867 Query: 1551 TLLELKRVQDVKKILSDDLAHLKERLSAVEDRSQYTDEINRLKEELNCSLKAE-----TN 1605 LLE +R ++++A K S + Q E+ + +E + E ++ Sbjct: 868 ALLEKQRE------FAENVAGFKRHWSNKTSQLQKIYELTKKQESEQTQKETELKIAFSD 921 Query: 1606 LKKEFATLKYKLETSTNDSEAKISDLLKQLDHYTKV-------VEMLNNEKDAISLAEKE 1658 L+K++ + + + EAK +L K + +V + L N+K A+ E Sbjct: 922 LQKDYQVFELQKDQEFRQIEAKQRELDKLAEKNNQVKLELDNRFQALQNQKQDTVQAQLE 981 Query: 1659 LYQKYEALNTE-------CESLKGKIVSLTKIKQELESDLNQKTDALQISNAALSSSTQ- 1710 L ++ LN E ESL + LTK Q +L ++ L + L + Q Sbjct: 982 LEREQHQLNLEQTAFNQANESLLKQREQLTKKIQAFHYELKKRNQFLALKGKRLFAKEQD 1041 Query: 1711 ---KNKEITEKIKYLEETLQLQMEQNSRNGELVKTLQASCNGYKDKFDDEKQK------N 1761 K++EI + K E+ E R E ++ ++ S + + + +++K N Sbjct: 1042 QQRKDQEINWRFKQFEKEYTDFDEAKKRELEELEKIRRSLSQSNVELERKREKLATDFTN 1101 Query: 1762 IDLYEENQTLQK--LNTDLQ---LQLKNLHERLSDTTEKNAWLSK-IHELENMVSLETD- 1814 ++ + N + + LN+ ++ L+ KN ++ K A+L K + + + L+ + Sbjct: 1102 LNKVQHNTQINRDQLNSQIRQFLLERKNFQRFSNEANAKKAFLIKRLRSFASNLKLQKEA 1161 Query: 1815 LKYEEMKKNKSLERAVEELQTKNSQQTDVIELANKN---RSEFEEATLKYEAQ-ISDLEK 1870 L ++++ +K E+ +ELQ + + Q + + +N + + +K + + +SD +K Sbjct: 1162 LAIQKLEFDKRDEQQKKELQ-QATLQLEQFKFEKQNFDIEKQRQLVAIKTQCEKLSDEKK 1220 Query: 1871 YISQQELEMKKSIRDNSSYRDKVQEMAQEIEFWKSRYESTMIGSKNIDSNNAQ 1923 ++Q+ +E+K + + ++K + Q+++ +Y + + +N++ Q Sbjct: 1221 ALNQKLVELKNLSQTYLANKNKAEYSQQQLQ---QKYTNLLDLKENLERTKDQ 1270 Score = 102 bits (253), Expect = 1e-23 Identities = 187/1024 (18%), Positives = 421/1024 (41%), Gaps = 124/1024 (12%) Query: 963 GLQETIREREATLEKLHSKNNELIKQISDLNCDISKEQSSQSLIKESKLKLENEIKRLKD 1022 G ++ E+ + + N+L+K+I L ++ + ++ +++ +L+ +I L+ Sbjct: 21 GYLQSEYEKNRSKTDVDKIENQLLKEIKSLEDELKNLKGLKNQAEDNP-ELDKKINHLEV 79 Query: 1023 VINSKEEEIKSFNDKLSSSEEDLDIKLVTLEKNCNIAMSRLQSLVTENSD-LRSKNENFK 1081 +N E K+F + + + K+ L+ + L L EN+D L SK N Sbjct: 80 DLNRLVNEYKNFQFQKNHMVD----KVSELDNLTRFYKNELTRLQQENADFLNSKYANLA 135 Query: 1082 KEKAALNNQL-------KNKESELLKMKEKIDNHKKELATFSKQRDDAVSEHGKITAELK 1134 +A +N+L +N+ + ++ +KI+ ++ + + A+ ++ IT E K Sbjct: 136 NFQANYHNKLNDFHRLIENQNQTINRLNQKINGNQNLI-----DNNVALLQNPNITVEKK 190 Query: 1135 ETRI--------QLTEYKSNYQKIKEEYSNFQRETKEQEQKKRNSLVESLNDSKIKELEA 1186 + +L + ++ + + EY N RE + + +N + E+++ ++I+ Sbjct: 191 NYLLNVIDQLYNELDQLENQKRLLSIEYENTYRELVSADNELQN-VYENIDQNQIQ---- 245 Query: 1187 RLSQEISLNQYLNKRISGNSVETNIXXXXXXXXXXXXPLDKEDIIKKYYDLQLAFTEITR 1246 +QY R + +E I L K++++ K L++ + Sbjct: 246 ------FKHQYQTYRDELSQLERKIQ------------LTKQELVDKESALRVKIDD--- 284 Query: 1247 XXXXXXXXXXXXXSRLRFTETRLASSSFEDXXXXXXXXXXXXXXXDMDPSIPLDSILNEP 1306 +RL + SF+D ++ + E Sbjct: 285 -------ADFYINARLAELDDVAKQLSFQDGITKQNAQHVEDKLVALNKEKDRLNTQKEA 337 Query: 1307 LDNCPDKES-DINKLMLEVDYLKRQLDIETRAHYDA--------ENAISALHSKFRKIQG 1357 N DINKL E + + L+ + E AL K + + Sbjct: 338 FFNLRQSALIDINKLQQENELFAKHLEHQQNEFEQKQSDSLLKLETEYKALQHKINEFKN 397 Query: 1358 ESSLSSSDIYKLKFEASEERVKSLEDKLKTMPLRDRTNLPVGDIIKNRDS-ISKYEEEIR 1416 ES+ S ++ + E E+R + ++ L L ++K++ + + ++ + + Sbjct: 398 ESATKSEELLNQERELFEKR-REIDTLLTQASLEYEHQRESSQLLKDKQNEVKQHFQNLE 456 Query: 1417 YYKLENYKLQEILNESNGKLSQLTLDLRQSKSKEALLSEQLDRLQKDLESTERQKELL-- 1474 Y K E K + +L++ S+ L++ ++E E+L ++K + +++ ELL Sbjct: 457 YAKKELDKERNLLDQQKKVDSEAIFQLKEKVAQERKELEELYLVKKQKQD-QKENELLFF 515 Query: 1475 SSTIKQQKQQFENCMDDLQGNELRLREHIHALKQAEEDVKNMASIIEKLKTQNKQKEKLI 1534 +KQ + FEN +L+ + L E HAL+ ++ + +K K N + +++ Sbjct: 516 EKQLKQHQADFEN---ELEAKQQELFEAKHALE------RSFIKLEDKEKDLNTKAQQIA 566 Query: 1535 WEREMERNDSDMQLQETLL---ELKRVQDVKKILSDDLAHLKERLSAVEDR-SQYTDEIN 1590 E + D L+ E + +Q K+ L + + + + + +R Q +E+ Sbjct: 567 NEFSQLKTDKSKSADFELMLQNEYENLQQEKQKLFQERTYFERNAAVLSNRLQQKREELL 626 Query: 1591 RLKEELNCSLKAETNLKKEFATLKYKLETSTNDSEAKISDLLKQLDHYTKVVEMLNNEKD 1650 + KE L+ L ++ ++K ++ + + +I L K+L +++ LN K+ Sbjct: 627 QQKETLD-QLTKSFEQERLINQREHKELVASVEKQKEI--LGKKLQDFSQT--SLNASKN 681 Query: 1651 AISLAEKELYQKYEALNTECESLKGKIVSLTKIKQELESDLNQKTDALQISNAALSSSTQ 1710 LAE+E+ K++ E E+ + ++++ + +++DL Q +L + L ++ Q Sbjct: 682 ---LAEREMAIKFK--EKEIEATEKQLLNDVNNAEVIQADLAQLNQSLNQERSELQNAKQ 736 Query: 1711 K----NKEITEKIKYLEETLQLQMEQ----NSRNGELVKTLQASCNGYKDKFDDEKQKNI 1762 + + + +K+ E +LQ ++++ + + QA G DK + EKQ + Sbjct: 737 RIADFHNDSLKKLNEYELSLQKRLQELQTLEANQKQHSYQNQAYFEGELDKLNREKQAFL 796 Query: 1763 DLYEEN--------QTLQKLNTDLQLQLKNLHERL-----------SDTTEKNAWLSKIH 1803 +L ++ Q L + L +Q L + +D L+ + Sbjct: 797 NLRKKQTMEVDAIKQRLSDKHQALNMQQAELDRKTHELNNAFLNHDADQKSLQDQLATVK 856 Query: 1804 ELENMVSLETDLKYEEMKK-NKSLERAVEELQTKNSQQTDVIELANKNRSEFEEATLKYE 1862 E + ++ LE E+ ++ +++ K SQ + EL K SE + + + Sbjct: 857 ETQKLIDLERSALLEKQREFAENVAGFKRHWSNKTSQLQKIYELTKKQESEQTQKETELK 916 Query: 1863 AQISDLEKYISQQELEMKKSIRDNSSYRDKVQEMAQEIEFWKSRYESTMIGSKNIDSNNA 1922 SDL+K EL+ + R + + ++ ++A++ K ++ +N + Sbjct: 917 IAFSDLQKDYQVFELQKDQEFRQIEAKQRELDKLAEKNNQVKLELDNRFQALQNQKQDTV 976 Query: 1923 QSKI 1926 Q+++ Sbjct: 977 QAQL 980 Score = 92.8 bits (229), Expect = 9e-21 Identities = 201/1159 (17%), Positives = 438/1159 (37%), Gaps = 178/1159 (15%) Query: 869 QINKLKNDLQEMESKKKFLEEKNQKTVNELENTQDLLNQEKENLRK------NESLLNRV 922 + L+ + Q++ ++ + E N L+ ++ L Q+KE L + E L+N+ Sbjct: 589 EYENLQQEKQKLFQERTYFERNAAVLSNRLQQKREELLQQKETLDQLTKSFEQERLINQR 648 Query: 923 --KTSSETLQKQFDDLVSEKDEISREKLEVAQNLEEAHQKIQGLQETIREREATLEKLHS 980 K +++KQ + L + + S+ L ++NL E I+ ++ I E L L+ Sbjct: 649 EHKELVASVEKQKEILGKKLQDFSQTSLNASKNLAEREMAIKFKEKEIEATEKQL--LND 706 Query: 981 KNNELIKQ--ISDLNCDISKEQS---------------SQSLIKESKLKLENEIKRLKDV 1023 NN + Q ++ LN +++E+S S + E +L L+ ++ L+ + Sbjct: 707 VNNAEVIQADLAQLNQSLNQERSELQNAKQRIADFHNDSLKKLNEYELSLQKRLQELQTL 766 Query: 1024 -INSKEEEIKS---FNDKLSSSEEDLDIKLVTLEKNCNIAMSRLQSLVTENSDLRSKNEN 1079 N K+ ++ F +L + L +K + Q L ++ L + Sbjct: 767 EANQKQHSYQNQAYFEGELDKLNREKQAFLNLRKKQTMEVDAIKQRLSDKHQALNMQQAE 826 Query: 1080 FKKEKAALNNQLKNKESELLKMKEKIDNHKKELATFSKQRDDAVSEHGKITAELKETRIQ 1139 ++ LNN N +++ +++++ K+ +R + + + + + Sbjct: 827 LDRKTHELNNAFLNHDADQKSLQDQLATVKETQKLIDLERSALLEKQREFAENVAGFKRH 886 Query: 1140 LTEYKSNYQKIKEEYSNFQRETKEQEQKKRNSLVESLNDSKIKELEARLSQEISLNQYLN 1199 + S QKI E + E ++E + + + + D ++ E + QE + Sbjct: 887 WSNKTSQLQKIYELTKKQESEQTQKETELKIAFSDLQKDYQV--FELQKDQEFRQIEAKQ 944 Query: 1200 KRISGNSVETNIXXXXXXXXXXXXPLDKEDIIKKYYDLQLAFTEITRXXXXXXXXXXXXX 1259 + + + + N K+D ++ +L+ ++ Sbjct: 945 RELDKLAEKNNQVKLELDNRFQALQNQKQDTVQAQLELEREQHQLNLEQTAFNQANESLL 1004 Query: 1260 SRLRFTETRLASSSFEDXXXXXXXXXXXXXXXDMDPSIPLDSILNEPLDNCPDKESDINK 1319 + ++ + +E KE D + Sbjct: 1005 KQREQLTKKIQAFHYELKKRNQFLALKGKRLFA--------------------KEQDQQR 1044 Query: 1320 LMLEVDYLKRQLDIETRAHYDAENAISALHSKFRKIQGESSLSSSDIYKLKFEASEERVK 1379 E+++ +Q + E + D + A + KI+ SLS S++ E +R K Sbjct: 1045 KDQEINWRFKQFEKE---YTDFDEAKKRELEELEKIR--RSLSQSNV-----ELERKREK 1094 Query: 1380 SLEDKLKTMPLRDRTNLPVGDIIKNRDSISKYEEEIRYYKLENYKLQEILNESNGKLSQL 1439 D ++ T + NRD ++ +IR + LE Q NE+N K + L Sbjct: 1095 LATDFTNLNKVQHNTQI-------NRDQLNS---QIRQFLLERKNFQRFSNEANAKKAFL 1144 Query: 1440 TLDLRQSKSKEALLSEQL--DRLQKDLESTERQKELLSSTIKQQKQQFENCMDDLQGNEL 1497 LR S L E L +L+ D +++KEL +T++ ++ +FE D++ Sbjct: 1145 IKRLRSFASNLKLQKEALAIQKLEFDKRDEQQKKELQQATLQLEQFKFEKQNFDIEKQRQ 1204 Query: 1498 ---------RLREHIHALKQAEEDVKNMASI----------------------------I 1520 +L + AL Q ++KN++ + Sbjct: 1205 LVAIKTQCEKLSDEKKALNQKLVELKNLSQTYLANKNKAEYSQQQLQQKYTNLLDLKENL 1264 Query: 1521 EKLKTQNKQKEKLIWEREME-RNDSDMQLQETLLELKRVQDVKKILSDD------LAHLK 1573 E+ K Q +K + I+ R + ND + ++ L + V D ++L ++ L++ Sbjct: 1265 ERTKDQLDKKHRSIFARLTKFANDLRFEKKQLLKAQRIVDDKNRLLKENERNLHFLSNET 1324 Query: 1574 ERLSAV---------EDRSQYTD---------------------EINRLKEELNCSLKAE 1603 ER AV + R Q TD E+ K +LN Sbjct: 1325 ERKRAVLEDQISYFEKQRKQATDAILASHKEVKKKEGELQKLLVELETRKTKLNNDFAKF 1384 Query: 1604 TNLKKEFATLKYKL-------ETSTNDSEAKISDLLKQLDHYTKVVEMLNNEKDAISLAE 1656 + ++EF + KL +T TN + K + + + Y + +E LN +K + Sbjct: 1385 SRQREEFENQRLKLLELQKTLQTQTNSNNFKTKAIQEIENSYKRGMEELNFQKKEFDKNK 1444 Query: 1657 KELYQKYEALNTECESLKGKIVSLTKIKQELESDLNQKTDALQISNAALSSSTQKNKEIT 1716 LY+ + + E E + ++ + K Q + L + + L I + ++ K Sbjct: 1445 SRLYEYFRKMRDEIERKESQVKLVLKETQRKANLLEAQANKLNIEKNTIDFKEKELKAFK 1504 Query: 1717 EKIKYLEETLQLQMEQNSRNGELVKTLQASCNGYKDKFDDEKQKNIDLYEENQTLQKLNT 1776 +K+ ++ + +Q EL+ + ++ K+ L ++ +T+++ Sbjct: 1505 DKV---DQDIDSTNKQRKELNELLNENKLLQQSLIERERAINSKDSLLNKKIETIKRQLH 1561 Query: 1777 DLQLQLKNLHERLSDTTEKNAWLSKIHELENMV--SLETDLK------YEEMKKNKSLER 1828 D ++++ L +R+ +K + ++I+ L S + D+K ++ + + Sbjct: 1562 DKEMRVLRLVDRMKLAEQK--YQTEINRLRTQTFDSEKQDIKNFFPPLFKINGNDMAFPY 1619 Query: 1829 AVEELQTKNSQQTDVIELANKNRSEFEEATLKYEAQISD-------LEKYISQQELEMKK 1881 L + Q + +++ + + +YE ++++ LEK + Q +LE Sbjct: 1620 LYPWLYPQQKQDDNTLQIRQLFEQQLQFMQQRYENELNELRRQRNLLEKKLDQIQLE--S 1677 Query: 1882 SIRDNSSYRDKVQEMAQEI 1900 + + S KV+ M +++ Sbjct: 1678 QLNNKQSEFSKVESMMEKL 1696 Score = 89.4 bits (220), Expect = 1e-19 Identities = 121/549 (22%), Positives = 237/549 (43%), Gaps = 74/549 (13%) Query: 1403 KNRDSISKYEEEIRYYKLENYKLQEILNESNGKLSQLTLDLRQSKSKEALLSEQLDRLQK 1462 K DS+ K E E YK +K+ E NES K +L R+ K + L + Sbjct: 373 KQSDSLLKLETE---YKALQHKINEFKNESATKSEELLNQERELFEKRREIDTLLTQASL 429 Query: 1463 DLESTERQKELLSSTIKQQKQQFENCMD-----DLQGNELRLREHI--HALKQAEEDVKN 1515 + E +LL + KQ F+N D + N L ++ + A+ Q +E V Sbjct: 430 EYEHQRESSQLLKDKQNEVKQHFQNLEYAKKELDKERNLLDQQKKVDSEAIFQLKEKVAQ 489 Query: 1516 MAS------IIEKLKTQNKQKEKLIWEREMERNDSDMQLQETLLELKRVQ--DVKKILSD 1567 +++K K K+ E L +E++++++ +D E LE K+ + + K L Sbjct: 490 ERKELEELYLVKKQKQDQKENELLFFEKQLKQHQADF---ENELEAKQQELFEAKHALER 546 Query: 1568 DLAHLKERLSAVEDRS-QYTDEINRLKEELNCSLKAETNLKKEFATLKYKLETSTNDSEA 1626 L+++ + ++ Q +E ++LK + + S E L+ E+ L+ + + Sbjct: 547 SFIKLEDKEKDLNTKAQQIANEFSQLKTDKSKSADFELMLQNEYENLQQEKQ-------- 598 Query: 1627 KISDLLKQLDHYTKVVEMLNNEKDAISLAEKELYQKYEALNTECESLKGKIVSLTKIKQE 1686 L ++ ++ + +L+N + +EL Q+ E L+ +S + + + + +E Sbjct: 599 ---KLFQERTYFERNAAVLSNR---LQQKREELLQQKETLDQLTKSFEQERLINQREHKE 652 Query: 1687 LESDLNQKTDAL-----QISNAALSSSTQ-KNKEITEKIKYLE-ETLQLQMEQNSRNGEL 1739 L + + ++ + L S +L++S +E+ K K E E + Q+ + N E+ Sbjct: 653 LVASVEKQKEILGKKLQDFSQTSLNASKNLAEREMAIKFKEKEIEATEKQLLNDVNNAEV 712 Query: 1740 VKT----LQASCNGYKDKFDDEKQKNIDLYEENQTLQKLNT-DLQLQLKNLHERLSDTTE 1794 ++ L S N + + + KQ+ D + N +L+KLN +L LQ K L E T E Sbjct: 713 IQADLAQLNQSLNQERSELQNAKQRIADFH--NDSLKKLNEYELSLQ-KRLQE--LQTLE 767 Query: 1795 KNAWLSKIHELENMVSLETDL--------------KYEEMKKNKSLERAVEELQTKNSQQ 1840 N K H +N E +L K + M+ + +R ++ Q N QQ Sbjct: 768 AN---QKQHSYQNQAYFEGELDKLNREKQAFLNLRKKQTMEVDAIKQRLSDKHQALNMQQ 824 Query: 1841 TDVIELANKNRSEFEEATLKYEAQISDLEKYISQQELEMKKSIRDNSSYRDKVQEMAQEI 1900 ++ ++ E A L ++A L+ ++ + K + S+ +K +E A+ + Sbjct: 825 AEL----DRKTHELNNAFLNHDADQKSLQDQLATVKETQKLIDLERSALLEKQREFAENV 880 Query: 1901 EFWKSRYES 1909 +K + + Sbjct: 881 AGFKRHWSN 889 Score = 85.9 bits (211), Expect = 1e-18 Identities = 164/831 (19%), Positives = 335/831 (40%), Gaps = 115/831 (13%) Query: 865 KFNEQINKLKNDLQEMESKKKFLEEKNQKTVN---ELENTQDLLNQEKENLRK-NESLLN 920 K E+ N++K E++++ + L+ + Q TV ELE Q LN E+ + NESLL Sbjct: 949 KLAEKNNQVK---LELDNRFQALQNQKQDTVQAQLELEREQHQLNLEQTAFNQANESLLK 1005 Query: 921 R--------------VKTSSETLQKQFDDLVSEKDEISREKLEVAQNLEEAHQKIQGLQE 966 + +K ++ L + L +++ + R+ E+ ++ ++ E Sbjct: 1006 QREQLTKKIQAFHYELKKRNQFLALKGKRLFAKEQDQQRKDQEINWRFKQFEKEYTDFDE 1065 Query: 967 TIREREATLEK-----------LHSKNNELIKQISDLN-----CDISKEQSSQSLIKESK 1010 + LEK L K +L ++LN I+++Q + S I++ Sbjct: 1066 AKKRELEELEKIRRSLSQSNVELERKREKLATDFTNLNKVQHNTQINRDQLN-SQIRQFL 1124 Query: 1011 LKLENEIKRLKDVINSKE----EEIKSFNDKLSSSEEDLDIKLVTLEKNCNIAMSRLQSL 1066 L+ +N +R + N+K+ + ++SF L +E L I+ + +K LQ Sbjct: 1125 LERKN-FQRFSNEANAKKAFLIKRLRSFASNLKLQKEALAIQKLEFDKRDEQQKKELQQA 1183 Query: 1067 VTENSDLRSKNENFKKEK----AALNNQLKNKESELLKMKEKIDNHKKELATFSKQRDDA 1122 + + + +NF EK A+ Q + E + +K+ K T+ ++ A Sbjct: 1184 TLQLEQFKFEKQNFDIEKQRQLVAIKTQCEKLSDEKKALNQKLVELKNLSQTYLANKNKA 1243 Query: 1123 VSEHGKITAELKETRIQLTEYKSNYQKIKEEYSNFQRETKEQEQKKRNSL----VESLND 1178 E+ + +L++ L + K N ++ K++ R + K N L + L Sbjct: 1244 --EYSQ--QQLQQKYTNLLDLKENLERTKDQLDKKHRSIFARLTKFANDLRFEKKQLLKA 1299 Query: 1179 SKIKELEARLSQEISLNQYLNKRISGNS---VETNIXXXXXXXXXXXXPL--DKEDIIKK 1233 +I + + RL +E N + + +E I + +++ KK Sbjct: 1300 QRIVDDKNRLLKENERNLHFLSNETERKRAVLEDQISYFEKQRKQATDAILASHKEVKKK 1359 Query: 1234 YYDLQLAFTEI-TRXXXXXXXXXXXXXSRLRFTETRLASSSFEDXXXXXXXXXXXXXXXD 1292 +LQ E+ TR R F RL + Sbjct: 1360 EGELQKLLVELETRKTKLNNDFAKFSRQREEFENQRLKLLELQKTLQTQTNSN------- 1412 Query: 1293 MDPSIPLDSILNEPLDNCPDKESDINKLMLEVDYLKRQLDIETRAHYDAENAISALHSKF 1352 N + E+ + M E+++ K++ D S L+ F Sbjct: 1413 -----------NFKTKAIQEIENSYKRGMEELNFQKKEFDKNK----------SRLYEYF 1451 Query: 1353 RKIQGESSLSSSDIYKLKFEASEERVKSLEDKLKTMPLRDRT-NLPVGDIIKNRDSISKY 1411 RK++ E S + KL + ++ + LE + + + T + ++ +D K Sbjct: 1452 RKMRDEIERKESQV-KLVLKETQRKANLLEAQANKLNIEKNTIDFKEKELKAFKD---KV 1507 Query: 1412 EEEIRYYKLENYKLQEILNESNGKLSQLTLDLRQSKSKEALLSEQLDRLQKDLESTERQK 1471 +++I + +L E+LNE+ L R SK++LL+++++ +++ L E + Sbjct: 1508 DQDIDSTNKQRKELNELLNENKLLQQSLIERERAINSKDSLLNKKIETIKRQLHDKEMRV 1567 Query: 1472 ELLSSTIKQQKQQFENCMDDLQGNELRLREHIHALKQAEEDVKNMASIIEKLKTQNKQKE 1531 L +K +Q+++ + N LR + ++D+KN + K+ + Sbjct: 1568 LRLVDRMKLAEQKYQT-----EINRLRTQ----TFDSEKQDIKNFFPPLFKINGNDMAFP 1618 Query: 1532 KLI-WEREMERNDSDMQLQETLLELKRVQDVKKILSDDLAHLKERLSAVE---DRSQYTD 1587 L W ++ D D LQ L +++Q +++ ++L L+ + + +E D+ Q Sbjct: 1619 YLYPWLYPQQKQD-DNTLQIRQLFEQQLQFMQQRYENELNELRRQRNLLEKKLDQIQLES 1677 Query: 1588 EINRLKEELNCSLKAETNLKKEFATLKYKLETSTNDSEAKISDLLKQLDHY 1638 ++N + E + K E+ ++K L K E+ ND + KI+ L K+++ + Sbjct: 1678 QLNNKQSEFS---KVESMMEK----LLEKTESRLNDFDQKINYLTKKVNQH 1721 Score = 68.6 bits (166), Expect = 2e-13 Identities = 143/759 (18%), Positives = 297/759 (39%), Gaps = 131/759 (17%) Query: 846 LFIRIKPLLTSSNDMTRT-KKFNEQINKLKNDLQEMESKKKFLEEKNQKTVNELENTQDL 904 L ++ K L D R ++ N + + + + + + KK E+ +K L + Sbjct: 1028 LALKGKRLFAKEQDQQRKDQEINWRFKQFEKEYTDFDEAKKRELEELEKIRRSLSQSNVE 1087 Query: 905 LNQEKENLRKNESLLNRVKTSSETLQKQFDDLVSEKDEISREKLEVAQNLEEAHQKIQGL 964 L +++E L + + LN+V+ +++ + D L S+ + E+ + EA+ K L Sbjct: 1088 LERKREKLATDFTNLNKVQHNTQINR---DQLNSQIRQFLLERKNFQRFSNEANAKKAFL 1144 Query: 965 QETIREREATLEKLHSKNNELIKQISDLNCDISKEQSSQSLIKESKLKLENE---IKRLK 1021 + +R + L KL + + K D + K++ Q+ ++ + K E + I++ + Sbjct: 1145 IKRLRSFASNL-KLQKEALAIQKLEFDKRDEQQKKELQQATLQLEQFKFEKQNFDIEKQR 1203 Query: 1022 DVINSKEEEIKSFNDKLSSSEEDLDIKLVTLEK-------NCNIAMSRLQSLVTENSDLR 1074 ++ IK+ +KLS ++ L+ KLV L+ N N A Q L + ++L Sbjct: 1204 QLV-----AIKTQCEKLSDEKKALNQKLVELKNLSQTYLANKNKAEYSQQQLQQKYTNLL 1258 Query: 1075 SKNENFKKEKAALN--------------NQLKNKESELLKMKEKIDNHKK---------- 1110 EN ++ K L+ N L+ ++ +LLK + +D+ + Sbjct: 1259 DLKENLERTKDQLDKKHRSIFARLTKFANDLRFEKKQLLKAQRIVDDKNRLLKENERNLH 1318 Query: 1111 ---------------ELATFSKQR----DDAVSEHGKITAELKETRIQLTEYKSNYQKIK 1151 +++ F KQR D ++ H ++ + E + L E ++ K+ Sbjct: 1319 FLSNETERKRAVLEDQISYFEKQRKQATDAILASHKEVKKKEGELQKLLVELETRKTKLN 1378 Query: 1152 EEYSNFQRETKEQEQKKRNSLVESLNDSKIKELEARLSQEISLNQYLNKRISGNSVETNI 1211 +++ F R+ +E E ++ K+ EL+ L + + N + K I +E + Sbjct: 1379 NDFAKFSRQREEFENQR----------LKLLELQKTLQTQTNSNNFKTKAI--QEIENSY 1426 Query: 1212 XXXXXXXXXXXXPLDKEDIIKKYYDLQLAFTEITRXXXXXXXXXXXXXSRLRFTETRLAS 1271 DK + Y + EI R +L ET+ + Sbjct: 1427 KRGMEELNFQKKEFDKNK-SRLYEYFRKMRDEIERKESQV---------KLVLKETQRKA 1476 Query: 1272 SSFEDXXXXXXXXXXXXXXXDMDPSIPLDSILNEPLDNCPDKESDINKLMLEVDYLKRQL 1331 + E + + D + ++ +D+ + ++N+L+ E L++ L Sbjct: 1477 NLLEAQANKLNIEKNTIDFKEKELKAFKDKV-DQDIDSTNKQRKELNELLNENKLLQQSL 1535 Query: 1332 DIETRAHYDAENAISALHSKFRKIQGESSLSSSDIYKLKFEASEERVKSLEDKLKTMPLR 1391 + E AI++ S K + K + E RV L D++K Sbjct: 1536 -------IERERAINSKDSLLNK--------KIETIKRQLHDKEMRVLRLVDRMKL---- 1576 Query: 1392 DRTNLPVGDIIKNRDSISKYEEEIRYYKLENY--KLQEILNESNGKLSQLTLDLRQSKSK 1449 + KY+ EI + + + + Q+I N + + Sbjct: 1577 ---------------AEQKYQTEINRLRTQTFDSEKQDIKN-----FFPPLFKINGNDMA 1616 Query: 1450 EALLSEQLDRLQKDLESTERQKELLSSTIKQQKQQFENCMDDLQGNELRLREHIHALKQA 1509 L L QK ++T + ++L ++ +Q++EN +++L+ L + + + Q Sbjct: 1617 FPYLYPWLYPQQKQDDNTLQIRQLFEQQLQFMQQRYENELNELRRQRNLLEKKLDQI-QL 1675 Query: 1510 EEDVKNMASIIEKLKTQNKQKEKLIWEREMERNDSDMQL 1548 E + N S K+++ EKL+ + E ND D ++ Sbjct: 1676 ESQLNNKQSEFSKVES---MMEKLLEKTESRLNDFDQKI 1711 Score = 67.4 bits (163), Expect = 4e-13 Identities = 116/555 (20%), Positives = 231/555 (41%), Gaps = 105/555 (18%) Query: 748 KASTKQNCEFLLTSLQLDTKVYKIGNTKLFFKAGVLA---DLEKQKDVK--LNNIMIKLT 802 K +Q E +LQL+ ++ N + + ++A EK D K LN +++L Sbjct: 1171 KRDEQQKKELQQATLQLEQFKFEKQNFDIEKQRQLVAIKTQCEKLSDEKKALNQKLVELK 1230 Query: 803 ATIRGYTVRK-EITYHLQKL--KKTRVIG---NTFRLYNRLVKEDPWFNLFIRI------ 850 + Y K + Y Q+L K T ++ N R ++L K+ ++F R+ Sbjct: 1231 NLSQTYLANKNKAEYSQQQLQQKYTNLLDLKENLERTKDQLDKKHR--SIFARLTKFAND 1288 Query: 851 -----KPLLTSS---NDMTRTKKFNEQ-INKLKNDLQEMESKKKFLEEKNQKTVNELENT 901 K LL + +D R K NE+ ++ L N E E K+ LE++ + + Sbjct: 1289 LRFEKKQLLKAQRIVDDKNRLLKENERNLHFLSN---ETERKRAVLEDQISYFEKQRKQA 1345 Query: 902 QDLLNQEKENLRKNESLLNRVKTSSET----LQKQFDDLVSEKDEISREKLEVAQNLEEA 957 D + + ++K E L ++ ET L F +++E ++L++ + L++ Sbjct: 1346 TDAILASHKEVKKKEGELQKLLVELETRKTKLNNDFAKFSRQREEFENQRLKLLE-LQKT 1404 Query: 958 HQ--------KIQGLQETIREREATLEKLHSKNNELIKQISDL-------NCDISKEQSS 1002 Q K + +QE + +E+L+ + E K S L +I +++S Sbjct: 1405 LQTQTNSNNFKTKAIQEIENSYKRGMEELNFQKKEFDKNKSRLYEYFRKMRDEIERKESQ 1464 Query: 1003 QSLI-KESKLK---LENEIKRL---KDVINSKEEEIKSFNDKLSSSEEDLDIKLVTLEKN 1055 L+ KE++ K LE + +L K+ I+ KE+E+K+F DK+ + + + L + Sbjct: 1465 VKLVLKETQRKANLLEAQANKLNIEKNTIDFKEKELKAFKDKVDQDIDSTNKQRKELNEL 1524 Query: 1056 CNIAMSRLQSLVTENSDLRSKNENFKKEKAALNNQLKNKESELLKMKEKI---------- 1105 N QSL+ + SK+ K+ + QL +KE +L++ +++ Sbjct: 1525 LNENKLLQQSLIERERAINSKDSLLNKKIETIKRQLHDKEMRVLRLVDRMKLAEQKYQTE 1584 Query: 1106 ---------DNHKKELATF------------------------SKQRDDAVSEHGKITAE 1132 D+ K+++ F KQ D+ + + Sbjct: 1585 INRLRTQTFDSEKQDIKNFFPPLFKINGNDMAFPYLYPWLYPQQKQDDNTLQIRQLFEQQ 1644 Query: 1133 LK----ETRIQLTEYKSNYQKIKEEYSNFQRETKEQEQKKRNSLVESLNDSKIKELEARL 1188 L+ +L E + ++++ Q E++ ++ S VES+ + +++ E+RL Sbjct: 1645 LQFMQQRYENELNELRRQRNLLEKKLDQIQLESQLNNKQSEFSKVESMMEKLLEKTESRL 1704 Query: 1189 SQEISLNQYLNKRIS 1203 + YL K+++ Sbjct: 1705 NDFDQKINYLTKKVN 1719 Score = 52.4 bits (124), Expect = 1e-08 Identities = 57/259 (22%), Positives = 122/259 (47%), Gaps = 14/259 (5%) Query: 1636 DHYTKVVEMLNNEKDAISLAEKELYQKYEALNTECESLKGKIVSLTKIKQELESDLNQ-K 1694 D Y + N K + E +L ++ ++L E ++LKG + + + EL+ +N + Sbjct: 20 DGYLQSEYEKNRSKTDVDKIENQLLKEIKSLEDELKNLKG-LKNQAEDNPELDKKINHLE 78 Query: 1695 TDALQISNAALSSSTQKNKEITEKIKYLEETLQLQMEQNSR----NGELVKTLQASCNGY 1750 D ++ N + QKN + +K+ L+ + + +R N + + + A+ + Sbjct: 79 VDLNRLVNEYKNFQFQKN-HMVDKVSELDNLTRFYKNELTRLQQENADFLNSKYANLANF 137 Query: 1751 KDKFDDEKQKNIDLYE-ENQTLQKLNTDLQLQLKNLHERLSDTTEKNAWLSKIHELENMV 1809 + + ++ L E +NQT+ +LN + + ++ N + K + L N++ Sbjct: 138 QANYHNKLNDFHRLIENQNQTINRLNQKINGNQNLIDNNVALLQNPNITVEKKNYLLNVI 197 Query: 1810 -SLETDL-KYEEMKKNKSL--ERAVEELQTKNSQQTDVIELANKNRSEFEEATLKYEAQI 1865 L +L + E K+ S+ E EL + +++ +V E ++N+ +F+ Y ++ Sbjct: 198 DQLYNELDQLENQKRLLSIEYENTYRELVSADNELQNVYENIDQNQIQFKHQYQTYRDEL 257 Query: 1866 SDLEKYI--SQQELEMKKS 1882 S LE+ I ++QEL K+S Sbjct: 258 SQLERKIQLTKQELVDKES 276 >SCER-S28-01-001306 ORFP:YDR285W ZIP1, Chr IV from 1032427-1035054 Length = 875 Score = 80.1 bits (196), Expect = 6e-17 Identities = 141/628 (22%), Positives = 279/628 (44%), Gaps = 92/628 (14%) Query: 1339 YDAENAISALHSKFRKIQGESSLSSSDIYKLKFEASEERVKSLEDKLKTMPLRDRTNLPV 1398 Y N + LH+ SS SS+D+ F ++ +L+ +L+ +D L V Sbjct: 156 YTMTNGKAPLHTSINN----SSTSSNDVLLEAFTNTQRICSNLKQELQKQQ-QDNAKLKV 210 Query: 1399 GDIIKNRDSISKYEEEIRYYKLENYKLQE----ILNESNGKLSQLTLDLRQS-------- 1446 + + K E++ YK LQE + + N + ++L DLRQ+ Sbjct: 211 R-LQSYASNSDKINEKVGKYKSCLETLQERIATLTSHKNNQETKLK-DLRQNHQLYQRRI 268 Query: 1447 ---KSKEALLSEQLDRLQKDLESTERQKELLSSTIKQQKQQFENCMDDLQGNELRLREHI 1503 K+ L++ ++ L K+ + + + I+ K++ ++C L +++ I Sbjct: 269 SGFKTSIENLNKTINDLGKNKKEADAELMKKGKEIEYLKRELDDCSGQLSEEKIKNSSLI 328 Query: 1504 HAL-KQAEEDVKNMASIIEKLKTQ-----NKQKEKL--IWEREMERNDS------DMQLQ 1549 + K EE +K++ + + K NK +E++ ++E++++++ ++ L+ Sbjct: 329 QEMGKNREEMIKSIENFFSEDKAHHLLQFNKFEERVHDLFEKKLQKHFDVAKDTLNVGLR 388 Query: 1550 ETLLEL---------KRVQDVKKILSDDLAHLKERLSAVEDRSQYTDE--INRLKEEL-N 1597 T +EL ++ +D+K+ L ++ K+ ++ + T + I ++EEL Sbjct: 389 NTTVELSSNTETMLKQQYEDIKENLEQKMSSSKDEMAKTINELSVTQKGLIMGVQEELLT 448 Query: 1598 CSLKAETNLKKEFATLKYKL---ETSTNDSEAKISDLLK-------QLDHYTKVVEMLNN 1647 S +T L E + +L + T + A + +L+K Q + Y + ++ L + Sbjct: 449 SSGNIQTALVSEMNNTRQELLDDASQTAKNYASLENLVKAYKAEIVQSNEYEERIKHLES 508 Query: 1648 EKDAIS---------LAEKE-----LYQKYEALNTECESLKGKIVSLTKIKQELESDLNQ 1693 E+ +S L KE L +K EA N E + GK SLT+ + L ++L + Sbjct: 509 ERSTLSSQKNQIISSLGTKEAQYEDLVKKLEAKNIEISQISGKEQSLTEKNENLSNELKK 568 Query: 1694 KTDALQISNAALSSSTQKNKEITEKIKYLEETLQLQMEQNSRNGELVKTLQASCNGYKDK 1753 D L+ N L+ +T+ N E KI E ++ + S N L + +Q +++ Sbjct: 569 VQDQLEKLN-NLNITTKSNYE--NKISSQNEIVKALV---SENDTLKQRIQQLVEIKENE 622 Query: 1754 FDDEKQKNIDLYEENQTLQKLNTDLQLQLKNLHERLSDTTEKNAWLSKIHELENMVSLET 1813 D K + N+ LQKLN ++ +QLK HE + E+N L E + ET Sbjct: 623 QKDHTTKLEAFQKNNEQLQKLNVEV-VQLK-AHE--LELEEQNRHLKNCLEKK-----ET 673 Query: 1814 DLKYEEMKKNKSLERAVEELQTKNSQQT-DVIELANKNRSEFEEATLKYEAQISDLEKYI 1872 ++ E + K+L++ V L+++ T + +EL + N EE T + ++ ++ + Sbjct: 674 GVE-ESLSDVKTLKQQVIVLKSEKQDITAEKLELQD-NLESLEEVTKNLQQKVQSQKREL 731 Query: 1873 SQ--QELEMKKSIRDNSSYRDKVQEMAQ 1898 Q +ELE K+ + N + Q + Sbjct: 732 EQKIKELEEIKNHKRNEPSKKGTQNFTK 759 Score = 72.4 bits (176), Expect = 1e-14 Identities = 123/553 (22%), Positives = 238/553 (43%), Gaps = 106/553 (19%) Query: 1299 LDSILNEPLDNCPDKESDINKLMLEVDYLKRQLDIETRAHYDAENAISALHSKFRKIQGE 1358 L+ +N+ N + ++++ K E++YLKR+LD D +S E Sbjct: 278 LNKTINDLGKNKKEADAELMKKGKEIEYLKRELD-------DCSGQLS-----------E 319 Query: 1359 SSLSSSDIYKLKFEASEERVKSLEDKLKTMPLRDRTNLPVGDIIKNRDSISKYEEEIRYY 1418 + +S + + + EE +KS+E N D + +K+EE R + Sbjct: 320 EKIKNSSLIQEMGKNREEMIKSIE------------NFFSEDKAHHLLQFNKFEE--RVH 365 Query: 1419 KLENYKLQEILNES----NGKLSQLTLDLRQSKSKEALLSEQLDRLQKDLE-STERQKEL 1473 L KLQ+ + + N L T++L S + E +L +Q + ++++LE K+ Sbjct: 366 DLFEKKLQKHFDVAKDTLNVGLRNTTVEL--SSNTETMLKQQYEDIKENLEQKMSSSKDE 423 Query: 1474 LSSTIKQ----QKQQFENCMDDLQGNELRLREHI---------HALKQAEEDVKNMASII 1520 ++ TI + QK ++L + ++ + L A + KN AS+ Sbjct: 424 MAKTINELSVTQKGLIMGVQEELLTSSGNIQTALVSEMNNTRQELLDDASQTAKNYASLE 483 Query: 1521 EKLKTQNKQKEKLIWEREMERNDSDMQLQETLLELKRVQDVKKILSDDLAHLKERLSAVE 1580 +K K +++ E E ++ + + L ++ Q + + + + Sbjct: 484 NLVKA---YKAEIVQSNEYEERIKHLESERSTLSSQKNQIISSLGTKE------------ 528 Query: 1581 DRSQYTDEINRLKEELNCSLKAETNLKKEFATLKYKLETSTNDSEAKISDLLKQLDHYTK 1640 +QY D + +L E N + + + + +L K E +N+ + K+ D L++L++ Sbjct: 529 --AQYEDLVKKL-EAKNIEI---SQISGKEQSLTEKNENLSNELK-KVQDQLEKLNNLN- 580 Query: 1641 VVEMLNNEKDAISLAEKELYQKYEALNTECESLKGKIVSLTKIKQELESDLNQKTDALQI 1700 + +N ++ IS ++ E+ +AL +E ++LK +I L +IK+ + D K +A Sbjct: 581 -ITTKSNYENKIS-SQNEI---VKALVSENDTLKQRIQQLVEIKENEQKDHTTKLEAF-- 633 Query: 1701 SNAALSSSTQKNKEITEKIKYLEETLQL---QMEQNSRNGELVKTLQASCNGYKDKFDDE 1757 QKN E +K+ E +QL ++E +N L L+ G ++ D Sbjct: 634 ---------QKNNEQLQKLNV--EVVQLKAHELELEEQNRHLKNCLEKKETGVEESLSDV 682 Query: 1758 ---KQKNIDLYEENQTLQKLNTDLQLQLKNLHERLSDTTEKNAWLSKIHELENMVSLETD 1814 KQ+ I L E Q + +LQ L++L E + +K S+ ELE + Sbjct: 683 KTLKQQVIVLKSEKQDITAEKLELQDNLESLEEVTKNLQQKVQ--SQKRELEQKIK---- 736 Query: 1815 LKYEEMKKNKSLE 1827 + EE+K +K E Sbjct: 737 -ELEEIKNHKRNE 748 Score = 67.0 bits (162), Expect = 5e-13 Identities = 92/425 (21%), Positives = 172/425 (40%), Gaps = 83/425 (19%) Query: 857 SNDMTRTKKFNEQINKLKNDLQEMESKKKFLEEKNQKTVNELENTQDLL--------NQE 908 SN +K + KLK LQ S + EK K + LE Q+ + NQE Sbjct: 192 SNLKQELQKQQQDNAKLKVRLQSYASNSDKINEKVGKYKSCLETLQERIATLTSHKNNQE 251 Query: 909 KE--NLRKNESLLNR----VKTSSETLQKQFDDLVSEKDEISREKLEVAQNLEEAHQKIQ 962 + +LR+N L R KTS E L K +DL K E E ++ + +E +++ Sbjct: 252 TKLKDLRQNHQLYQRRISGFKTSIENLNKTINDLGKNKKEADAELMKKGKEIEYLKRELD 311 Query: 963 G----LQETIREREATLEKLHSKNNELIKQISDLNCDISKEQSSQSLIKESKL------- 1011 L E + + ++++ E+IK I + E + L++ +K Sbjct: 312 DCSGQLSEEKIKNSSLIQEMGKNREEMIKSIE----NFFSEDKAHHLLQFNKFEERVHDL 367 Query: 1012 ---KLENEIKRLKDVIN-------------------SKEEEIK-SFNDKLSSSEED---- 1044 KL+ KD +N + E+IK + K+SSS+++ Sbjct: 368 FEKKLQKHFDVAKDTLNVGLRNTTVELSSNTETMLKQQYEDIKENLEQKMSSSKDEMAKT 427 Query: 1045 ------------LDIKLVTLEKNCNIAMSRLQSLVTENSDLRSKNENFKKEKAALNNQLK 1092 + ++ L + NI + + + +L K A+L N +K Sbjct: 428 INELSVTQKGLIMGVQEELLTSSGNIQTALVSEMNNTRQELLDDASQTAKNYASLENLVK 487 Query: 1093 NKESELL---KMKEKIDNHKKELATFSKQRDDAVSEHG-------KITAELKETRIQLTE 1142 ++E++ + +E+I + + E +T S Q++ +S G + +L+ I++++ Sbjct: 488 AYKAEIVQSNEYEERIKHLESERSTLSSQKNQIISSLGTKEAQYEDLVKKLEAKNIEISQ 547 Query: 1143 YKSNYQKIKEEYSNFQRETKE-QEQKKR----NSLVESLNDSKIKELEARLSQEISLNQY 1197 Q + E+ N E K+ Q+Q ++ N +S ++KI + +S N Sbjct: 548 ISGKEQSLTEKNENLSNELKKVQDQLEKLNNLNITTKSNYENKISSQNEIVKALVSENDT 607 Query: 1198 LNKRI 1202 L +RI Sbjct: 608 LKQRI 612 Score = 65.9 bits (159), Expect = 1e-12 Identities = 145/786 (18%), Positives = 297/786 (37%), Gaps = 110/786 (13%) Query: 891 NQKTVNELENTQDLLNQEKENLRKNESLLNRVKTSSETLQKQFDDLVSEKDEISREKLEV 950 N + NTQ + + K+ L+K + + L+ + S D+I+ Sbjct: 177 NDVLLEAFTNTQRICSNLKQELQKQQQ-------DNAKLKVRLQSYASNSDKIN------ 223 Query: 951 AQNLEEAHQKIQGLQETIREREATLEKLHSKNNELIKQISDLNCDISKEQSSQSLIKESK 1010 E K + ET++ER ATL KNN+ K + DL Q Q I K Sbjct: 224 -----EKVGKYKSCLETLQERIATLTS--HKNNQETK-LKDLR---QNHQLYQRRISGFK 272 Query: 1011 LKLENEIKRLKDVINSKEE---EIKSFNDKLSSSEEDLDIKLVTLEKNCNIAMSRLQSLV 1067 +EN K + D+ +K+E E+ ++ + +LD L + S +Q + Sbjct: 273 TSIENLNKTINDLGKNKKEADAELMKKGKEIEYLKRELDDCSGQLSEEKIKNSSLIQEMG 332 Query: 1068 TENSDLRSKNENFKKEKAALNNQLKNKESELLK--MKEKIDNHKKELATFSKQRDDAVSE 1125 ++ ENF E A + NK E + ++K+ H F +D Sbjct: 333 KNREEMIKSIENFFSEDKAHHLLQFNKFEERVHDLFEKKLQKH------FDVAKDT---- 382 Query: 1126 HGKITAELKETRIQLTEYKSNYQKIKEEYSNFQRETKEQEQKKRNSLVESLNDSKI--KE 1183 + L+ T ++L+ + +K++Y + + +++ ++ + +++N+ + K Sbjct: 383 ---LNVGLRNTTVELSS--NTETMLKQQYEDIKENLEQKMSSSKDEMAKTINELSVTQKG 437 Query: 1184 LEARLSQEISLNQYLNKRISGNSVETNIXXXXXXXXXXXXPLDKEDIIKKYYDLQLAFTE 1243 L + +E+ + SGN ++T + D K Y L+ Sbjct: 438 LIMGVQEELLTS-------SGN-IQTALVSEMNNTRQELLD-DASQTAKNYASLE----N 484 Query: 1244 ITRXXXXXXXXXXXXXSRLRFTETRLASSSFEDXXXXXXXXXXXXXXXDM-----DPSIP 1298 + + R++ E+ ++ S + D+ +I Sbjct: 485 LVKAYKAEIVQSNEYEERIKHLESERSTLSSQKNQIISSLGTKEAQYEDLVKKLEAKNIE 544 Query: 1299 LDSILNEPLDNCPDKESDINKLMLEVDYLKR--QLDIETRAHYDAENAISALHSKFRKIQ 1356 + I + E+ N+L D L++ L+I T+++Y EN IS+ + + + Sbjct: 545 ISQISGKEQSLTEKNENLSNELKKVQDQLEKLNNLNITTKSNY--ENKISSQNEIVKALV 602 Query: 1357 GESSLSSSDIYKLKFEASEERVKSLEDKLKTMPLRDRTNLPVGDIIKNRDSISKYEEEIR 1416 E+ I +L E E K KL+ KN + + K E+ Sbjct: 603 SENDTLKQRIQQL-VEIKENEQKDHTTKLEAFQ-------------KNNEQLQKLNVEVV 648 Query: 1417 YYKLENYKLQEILNESNGKLSQLTLDLRQSKSKEALLSEQLDRLQKDLESTERQKELLSS 1476 K +L+E L + + +S S L +Q+ L+ + + +K L Sbjct: 649 QLKAHELELEEQNRHLKNCLEKKETGVEESLSDVKTLKQQVIVLKSEKQDITAEKLELQD 708 Query: 1477 TIKQQKQQFENCMDDLQGNELRLREHIHALKQAEEDVKNMASIIEKLKTQNKQK-----E 1531 ++ ++ +N +Q + L + I L++ + +N S K TQN K + Sbjct: 709 NLESLEEVTKNLQQKVQSQKRELEQKIKELEEIKNHKRNEPS---KKGTQNFTKPSDSPK 765 Query: 1532 KLIWEREMERNDSDMQLQETLLELKRVQDVKKILSDDLAHLKERLSAVEDRSQYTDEINR 1591 K + N+S + + + +V + K R+++ ++ S++ DE + Sbjct: 766 KNATTSNLFPNNS-AAIHSPMKKCPKVDHIS----------KSRINSSKETSKFNDEFD- 813 Query: 1592 LKEELNCSLKAETNLKKEFATLKYKLETSTNDSEAKISDLLKQLDHYTKVVEMLNNEKDA 1651 L N L+ + ++ K++ +N + IS K L ++ +E + Sbjct: 814 LSSSSNDDLELTNPSPIQIKPVRGKIKKGSNCMKPPISSRKKLL--------LVEDEDQS 865 Query: 1652 ISLAEK 1657 + +++K Sbjct: 866 LKISKK 871 Score = 60.5 bits (145), Expect = 5e-11 Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 37/206 (17%) Query: 864 KKFNEQINKLKNDLQEMESKKKFLEEKNQKTVNELENTQDLLNQEKENLRKNESLLNRVK 923 +K NEQ+ KL ++ ++++ + LEE+N+ N LE K E+ + Sbjct: 634 QKNNEQLQKLNVEVVQLKAHELELEEQNRHLKNCLE--------------KKETGVEESL 679 Query: 924 TSSETLQKQFDDLVSEKDEISREKLEVAQNLEEAHQKIQGLQETIREREATLE------- 976 + +TL++Q L SEK +I+ EKLE+ NLE + + LQ+ ++ ++ LE Sbjct: 680 SDVKTLKQQVIVLKSEKQDITAEKLELQDNLESLEEVTKNLQQKVQSQKRELEQKIKELE 739 Query: 977 --KLHSKNNELIKQISDL---NCDISKEQSSQSLIKESKLKLENEIKRL-------KDVI 1024 K H +N K + + K ++ +L + + + +K+ K I Sbjct: 740 EIKNHKRNEPSKKGTQNFTKPSDSPKKNATTSNLFPNNSAAIHSPMKKCPKVDHISKSRI 799 Query: 1025 NSKEEEIKSFNDKL---SSSEEDLDI 1047 NS +E K FND+ SSS +DL++ Sbjct: 800 NSSKETSK-FNDEFDLSSSSNDDLEL 824 Score = 59.3 bits (142), Expect = 1e-10 Identities = 76/382 (19%), Positives = 159/382 (41%), Gaps = 49/382 (12%) Query: 850 IKPLLTSSNDMTRTKKFNEQINKLKNDLQEMESKKKFLEEKNQKTVNELENTQDLLNQEK 909 I+ L S + TR + ++ KN K + E Q NE E L E+ Sbjct: 453 IQTALVSEMNNTRQELLDDASQTAKNYASLENLVKAYKAEIVQS--NEYEERIKHLESER 510 Query: 910 ENLRKNESLLNRVKTSSETLQKQFDDLVSEKDEISREKLEVAQNLEEAHQKIQGLQETIR 969 L + N++ +S T + Q++DLV + + + E +++ + +K + L ++ Sbjct: 511 STLSSQK---NQIISSLGTKEAQYEDLVKKLEAKNIEISQISGKEQSLTEKNENLSNELK 567 Query: 970 EREATLEKLHSKN--------------NELIKQISDLNCDISKEQSSQSLIKESK----- 1010 + + LEKL++ N NE++K + N + + IKE++ Sbjct: 568 KVQDQLEKLNNLNITTKSNYENKISSQNEIVKALVSENDTLKQRIQQLVEIKENEQKDHT 627 Query: 1011 LKLENEIKRLKDV--INSKEEEIKSFNDKLSSSEEDLDIKLVTLEKNCNIAMSRLQSLVT 1068 KLE K + + +N + ++K+ +L L L E ++S +++L Sbjct: 628 TKLEAFQKNNEQLQKLNVEVVQLKAHELELEEQNRHLKNCLEKKETGVEESLSDVKTLKQ 687 Query: 1069 ENSDLRSKNENFKKEKAALNNQLKNKESELLKMKEKIDNHKKELATFSKQRDDAVSEHGK 1128 + L+S+ ++ EK L + L++ E +++K+ + K+EL Sbjct: 688 QVIVLKSEKQDITAEKLELQDNLESLEEVTKNLQQKVQSQKREL---------------- 731 Query: 1129 ITAELKETRIQLTEYKSNYQKIKEEYSNFQRETKEQEQKKRNSLVESLNDSKIKELEARL 1188 E +I+ E N+++ + Q TK + K+N+ +L + + + + Sbjct: 732 ------EQKIKELEEIKNHKRNEPSKKGTQNFTKPSDSPKKNATTSNLFPNNSAAIHSPM 785 Query: 1189 SQEISLNQYLNKRISGNSVETN 1210 + ++ RI+ +S ET+ Sbjct: 786 KKCPKVDHISKSRIN-SSKETS 806 >MGEN-G37-01-000335 MG328 conserved hypothetical protein Length = 756 Score = 75.5 bits (184), Expect = 1e-15 Identities = 92/387 (23%), Positives = 172/387 (44%), Gaps = 66/387 (17%) Query: 856 SSNDMTRTKKFNEQINKLKNDLQEMESKKKFLEEKNQ-------KTVNELENTQDLLNQE 908 +SND +K+++ +N+ + E E+K L+ K Q KT++ L++ D+L E Sbjct: 402 TSND--ENEKYDDLLNQYELLFDENETKFDKLQVKQQALNLDYQKTISALKHENDVLLDE 459 Query: 909 KENLRKNESLLNRVKTSSETLQK--------------QFDDLVSEKDEISREKLEV---- 950 E R ++ N K S E +K Q D ++E +E + EK + Sbjct: 460 IEWTRSKDNDFNNTKNSFEEQKKALDEKLNGLTIQNQQLQDKIAELEEWNEEKSNLNTNQ 519 Query: 951 AQNLEEAHQKIQGLQETIREREATLEKLHSKNNELIKQISD-------LNCDISKEQSSQ 1003 NL++ + Q L +++ ATLE+++ NE I + D N ++K Q+ Sbjct: 520 LVNLQQQLKDSQNLFNVAQDKLATLEEVNLALNEKINDLEDELSGSENSNNLLAKLQADH 579 Query: 1004 SLIKESKLKLENEIKRLKDVINSKEEEIKSFNDKLSSSEEDLDIKLVTLEKNCNIAMSRL 1063 +++ES KL+ + ++LK N + + + D LS+ EE LEK A L Sbjct: 580 EILQESYGKLKTDFEKLKK--NKLNDANEQYQDLLSAFEETNS----ELEK----AKQSL 629 Query: 1064 QSLVTENSDLRSKNENFKKEKAALNNQLKNKESELLKMKEKIDNHKKELATFSKQRDDAV 1123 + +EN+ L+ + N L+N + EL D H EL T +++ Sbjct: 630 SASDSENNQLKQQ-----------INSLENAKKELQFTPVTSDEHLDELETLKIEKEQLF 678 Query: 1124 SEHGKITAELKETRIQLTEYKSNYQKIKEEYSNFQR--ETKEQEQKKRNSLVESLNDSKI 1181 E+ + +L+ + +N + +E S+ + E K+ KKR+ ++++ +D Sbjct: 679 LENQALQNQLQ----YFNDISANQTEEIKEASDEDKPVEIKKPRIKKRDFVIQNKDDKL- 733 Query: 1182 KELEARLSQEISLNQYLNKRISGNSVE 1208 A+LS++ + Y + N+ E Sbjct: 734 ----AKLSKKERIQAYAERLAKINANE 756 Score = 70.9 bits (172), Expect = 4e-14 Identities = 123/589 (20%), Positives = 227/589 (38%), Gaps = 111/589 (18%) Query: 1339 YDAENAISALHSKFRKIQGESSLSSSDIYK--LKFEASEERVKSLED------------- 1383 Y EN A++ + IQ + + + K LK + ++V L+D Sbjct: 192 YSIENLTKAINPVHKTIQYDQNDDQPFVVKRILKEQHPTKKVDELDDYNNKELLLENADL 251 Query: 1384 KLKTMPLRDRTNLPVGDIIKNRDSISKYEEEIRYYKLENYKLQEILNESNGKL------- 1436 K + L++ N + D+ + D + + E + L KLQ+ L + N L Sbjct: 252 KKQIDDLKENNNDQIFDLEQEIDDLKRRLSEEKSKHLHTKKLQDDLLQENRDLYEQLQNK 311 Query: 1437 --------SQLTLDLRQSKSKEALLSEQLDRLQKDLESTERQKELLSSTIKQQKQQFENC 1488 ++ +L K ++ALLS+QLD L+ + ++Q LL N Sbjct: 312 PVAINPLSDEVNEELENLKQEKALLSDQLDALKNKSSNVQQQLALL--------PVLNNQ 363 Query: 1489 MDDLQGNELRLREHIHALKQAEEDVKNMASIIEKL--KTQNKQKEK---------LIWER 1537 +++LQ L RE L E++ + + ++KL T N + EK L+++ Sbjct: 364 INELQNQLLTAREANQRLDLVEQENDFLKNELKKLHDNTSNDENEKYDDLLNQYELLFDE 423 Query: 1538 EMERNDS--------DMQLQETLLELKRVQDV-------------------------KKI 1564 + D ++ Q+T+ LK DV KK Sbjct: 424 NETKFDKLQVKQQALNLDYQKTISALKHENDVLLDEIEWTRSKDNDFNNTKNSFEEQKKA 483 Query: 1565 LSDDLAHLKERLSAVEDRSQYTDEINRLKEELNCS--------LKAETNLKKEFATLKYK 1616 L + L L + ++D+ +E N K LN + LK NL F + K Sbjct: 484 LDEKLNGLTIQNQQLQDKIAELEEWNEEKSNLNTNQLVNLQQQLKDSQNL---FNVAQDK 540 Query: 1617 LETSTNDSEAKISDLLKQLDHYTKVVEMLNNEKDAISLAEKELYQKYEALNTECESL-KG 1675 L T + +++ + L+ E NN + + L + Y L T+ E L K Sbjct: 541 LAT-LEEVNLALNEKINDLEDELSGSENSNNLLAKLQADHEILQESYGKLKTDFEKLKKN 599 Query: 1676 KIVSLTKIKQELESDLNQKTDALQISNAALSSSTQKNKEITEKIKYLEETLQLQMEQNSR 1735 K+ + Q+L S + L+ + +LS+S +N ++ ++I LE + Sbjct: 600 KLNDANEQYQDLLSAFEETNSELEKAKQSLSASDSENNQLKQQINSLENAKK-------- 651 Query: 1736 NGELVKTLQASCNGYKDKFDDEKQKNIDLYEENQTLQK----LNTDLQLQLKNLHERLSD 1791 EL T + + + D+ + K + L+ ENQ LQ N Q + + E + Sbjct: 652 --ELQFT-PVTSDEHLDELETLKIEKEQLFLENQALQNQLQYFNDISANQTEEIKEASDE 708 Query: 1792 TTEKNAWLSKIHELENMVSLETDLKYEEMKKNKSLERAVEELQTKNSQQ 1840 +I + + ++ + D K ++ K + ++ E L N+ + Sbjct: 709 DKPVEIKKPRIKKRDFVIQNKDD-KLAKLSKKERIQAYAERLAKINANE 756 Score = 65.5 bits (158), Expect = 2e-12 Identities = 85/393 (21%), Positives = 169/393 (43%), Gaps = 54/393 (13%) Query: 867 NEQINKLKNDLQEMESKKKFLEEKNQKTVNELENTQDLLNQEKENLRKNESLLNRVKTSS 926 N+QI L+ QE++ K+ L E+ K ++ + DL L++N L +++ Sbjct: 263 NDQIFDLE---QEIDDLKRRLSEEKSKHLHTKKLQDDL-------LQENRDLYEQLQNKP 312 Query: 927 ETLQKQFDDLVSEKDEISREKLEVAQNLEEAHQKIQGLQETIREREATLEKLHSKNNELI 986 + D++ E + + +EK ++ L+ K +Q+ + A L L+++ NEL Sbjct: 313 VAINPLSDEVNEELENLKQEKALLSDQLDALKNKSSNVQQQL----ALLPVLNNQINELQ 368 Query: 987 KQISDLNCDISKEQSSQ--SLIKESKLKLENEIKRLKDVINSKEEEIKSFNDKLSSSE-- 1042 Q+ ++ +++Q L+++ L+NE+K+L D N+ +E + ++D L+ E Sbjct: 369 NQL------LTAREANQRLDLVEQENDFLKNELKKLHD--NTSNDENEKYDDLLNQYELL 420 Query: 1043 ----EDLDIKLVTLEKNCNIAMSRLQSLVTENSDLRSKNENFKKEKAALNNQLKNKESEL 1098 E KL ++ N+ + S + +D+ + + K +N N ++ Sbjct: 421 FDENETKFDKLQVKQQALNLDYQKTISALKHENDVLLDEIEWTRSK---DNDFNNTKNSF 477 Query: 1099 LKMKEKIDNHKKELATFSKQRDDAVSEHGKITAELKETRIQLTEYKSNYQKIKEEYSNFQ 1158 + K+ +D L ++Q D + AEL+E E KSN + N Q Sbjct: 478 EEQKKALDEKLNGLTIQNQQLQDKI-------AELEE----WNEEKSNLN--TNQLVNLQ 524 Query: 1159 RETKEQEQ-----KKRNSLVESLN---DSKIKELEARLSQEISLNQYLNKRISGNSVETN 1210 ++ K+ + + + + +E +N + KI +LE LS + N L K + + + Sbjct: 525 QQLKDSQNLFNVAQDKLATLEEVNLALNEKINDLEDELSGSENSNNLLAKLQADHEILQE 584 Query: 1211 IXXXXXXXXXXXXPLDKEDIIKKYYDLQLAFTE 1243 D ++Y DL AF E Sbjct: 585 SYGKLKTDFEKLKKNKLNDANEQYQDLLSAFEE 617 Score = 53.5 bits (127), Expect = 6e-09 Identities = 137/713 (19%), Positives = 275/713 (38%), Gaps = 131/713 (18%) Query: 874 KNDLQEMESKKKFLEEKNQKTVNELENTQDLLNQEKENLRKNESLLNRVKTSSETLQKQF 933 KN L ++ K EE+ Q+TV++ Q++ +Q L +KT + L+ Sbjct: 85 KNVLNHYANQLKTREEE-QQTVDQTMAFQEVDDQSV--------LTKEIKTGFQELKPSV 135 Query: 934 DDLVSEKDEISREKLEVAQNLEEAHQKIQGLQET------------IREREATLEKLHSK 981 +KDEI E + E +Q + + ET ++E E + +S Sbjct: 136 ITAEDDKDEIKPEATKQVSFEELFNQPSEEINETKKPEVQIFSTDKVKEPE-QFDDFYSI 194 Query: 982 NNELIKQISDLNCDISKEQS-SQSLIKESKLKLENEIKRLKDVINSKEEEI--------- 1031 N L K I+ ++ I +Q+ Q + + LK ++ K++ ++ + +E+ Sbjct: 195 EN-LTKAINPVHKTIQYDQNDDQPFVVKRILKEQHPTKKVDELDDYNNKELLLENADLKK 253 Query: 1032 ------KSFNDKLSSSEEDLD--IKLVTLEKNCNIAMSRLQ-SLVTENSDL--------- 1073 ++ ND++ E+++D + ++ EK+ ++ +LQ L+ EN DL Sbjct: 254 QIDDLKENNNDQIFDLEQEIDDLKRRLSEEKSKHLHTKKLQDDLLQENRDLYEQLQNKPV 313 Query: 1074 ---------RSKNENFKKEKAALNNQ---LKNKESEL---LKMKEKIDNHKKELATFSKQ 1118 + EN K+EKA L++Q LKNK S + L + ++N EL Sbjct: 314 AINPLSDEVNEELENLKQEKALLSDQLDALKNKSSNVQQQLALLPVLNNQINEL------ 367 Query: 1119 RDDAVSEHGKITAELKETRIQLTEYKSNYQKIKEEYSNFQRETKEQEQKKRNSLVESL-- 1176 ++ +TA R+ L E ++++ +K E T E +K + L+ Sbjct: 368 ------QNQLLTAREANQRLDLVEQENDF--LKNELKKLHDNTSNDENEKYDDLLNQYEL 419 Query: 1177 ----NDSKIKELEARLSQEISLNQYLNKRISGNSVETNI----------XXXXXXXXXXX 1222 N++K +L+ + + +LN K IS E ++ Sbjct: 420 LFDENETKFDKLQVK---QQALNLDYQKTISALKHENDVLLDEIEWTRSKDNDFNNTKNS 476 Query: 1223 XPLDKEDIIKKYYDLQLAFTEITRXXXXXXXXXXXXXSRLRFTETRLASSSFEDXXXXXX 1282 K+ + +K L + ++ + S L + +D Sbjct: 477 FEEQKKALDEKLNGLTIQNQQL-QDKIAELEEWNEEKSNLNTNQLVNLQQQLKDSQNLFN 535 Query: 1283 XXXXXXXXXDMDPSIPLDSILNEPLDNCPDKESDINKL--------MLEVDYLKRQLDIE 1334 + + ++ L+ +N+ D E+ N L +L+ Y K + D E Sbjct: 536 VAQDKLATLE-EVNLALNEKINDLEDELSGSENSNNLLAKLQADHEILQESYGKLKTDFE 594 Query: 1335 ----------TRAHYDAENAISALHSKFRKIQGESSLSSSDIYKLKFEASEERVKSLEDK 1384 + D +A +S+ K + S S S+ +LK +++ SLE+ Sbjct: 595 KLKKNKLNDANEQYQDLLSAFEETNSELEKAKQSLSASDSENNQLK-----QQINSLENA 649 Query: 1385 LKTMPLRDRTNLPVGDIIKNRDSISKYEEEIRYYKLENYKLQEILNESNGKLSQLTLDLR 1444 K + T+ ++ D + + E LEN LQ L N + T +++ Sbjct: 650 KKELQFTPVTS------DEHLDELETLKIEKEQLFLENQALQNQLQYFNDISANQTEEIK 703 Query: 1445 QSKSKEALLSEQLDRLQK-DLESTERQKELLSSTIKQQKQQFENCMDDLQGNE 1496 ++ ++ + + R++K D + +L + K++ Q + + + NE Sbjct: 704 EASDEDKPVEIKKPRIKKRDFVIQNKDDKLAKLSKKERIQAYAERLAKINANE 756 Score = 44.3 bits (103), Expect = 4e-06 Identities = 78/406 (19%), Positives = 166/406 (40%), Gaps = 51/406 (12%) Query: 1301 SILNEPLDNCPDKESDINKL---MLEVDYLKRQLDIETRAHYDAENAISALHSKFRKIQG 1357 S + + L P + IN+L +L ++LD+ + + +N + LH + Sbjct: 348 SNVQQQLALLPVLNNQINELQNQLLTAREANQRLDLVEQENDFLKNELKKLHDNTSNDEN 407 Query: 1358 ESSLSSSDIYKLKFEASEERVKSLEDKLKTM---------PLRDRTNLPVGDIIKNRDSI 1408 E + Y+L F+ +E + L+ K + + L+ ++ + +I R Sbjct: 408 EKYDDLLNQYELLFDENETKFDKLQVKQQALNLDYQKTISALKHENDVLLDEIEWTRSKD 467 Query: 1409 SKYEEEIRYYKLENYKLQEILNE---SNGKLSQLTLDLRQ-SKSKEALLSEQLDRLQKDL 1464 + + ++ + L E LN N +L +L + ++ K L + QL LQ+ L Sbjct: 468 NDFNNTKNSFEEQKKALDEKLNGLTIQNQQLQDKIAELEEWNEEKSNLNTNQLVNLQQQL 527 Query: 1465 ESTERQKELLS---STIKQQKQQFENCMDDLQGNELRLREHIHALKQAEEDVKNMASIIE 1521 + ++ + +T+++ ++DL+ + L + + D + + Sbjct: 528 KDSQNLFNVAQDKLATLEEVNLALNEKINDLEDELSGSENSNNLLAKLQADHEILQESYG 587 Query: 1522 KLKTQ-NKQKEKLIWEREMERNDSDMQLQETLLELKRVQDVKKILSDDLAHLKERLSAVE 1580 KLKT K K+ + + + D +ET EL++ + + LK++++++E Sbjct: 588 KLKTDFEKLKKNKLNDANEQYQDLLSAFEETNSELEKAKQSLSASDSENNQLKQQINSLE 647 Query: 1581 D-----------RSQYTDEINRLKEELNCSLKAETNLKKEFATLKYKLETSTNDSEAKIS 1629 + ++ DE+ LK E + L E L+ +L+ ND A + Sbjct: 648 NAKKELQFTPVTSDEHLDELETLKIE-------KEQLFLENQALQNQLQ-YFNDISANQT 699 Query: 1630 DLLKQLDHYTKVVE-----------MLNNEKDAIS-LAEKELYQKY 1663 + +K+ K VE ++ N+ D ++ L++KE Q Y Sbjct: 700 EEIKEASDEDKPVEIKKPRIKKRDFVIQNKDDKLAKLSKKERIQAY 745 >MPNE-M12-01-000474 gi|13508213|ref|NP_110162.1| coiled coil protein, putative structural protein involved in cytosceleton [Mycoplasma pneumoniae] Length = 1033 Score = 71.6 bits (174), Expect = 2e-14 Identities = 108/569 (18%), Positives = 227/569 (39%), Gaps = 58/569 (10%) Query: 1351 KFRKIQGESSLSSSDIYKLKFEASEERVKSLEDKLKTMPLRDRTNLPVGDIIKN------ 1404 KF + + L+ + + + E V SL+ + + L +R N + IK Sbjct: 478 KFDSKKHQEQLALIPSLRSEINSLETEVISLKQTNQRLSLIERENNFLKTEIKQLRETKL 537 Query: 1405 RDSISKYEEEIRYYKL----ENYKLQEILNESNGKLSQLTLDLRQSKSKEALLSEQLDRL 1460 D +KY ++ Y+L + KL+E+ +E + L Q + L ++LD++ Sbjct: 538 NDENTKYRNLLKQYELMRADSDAKLKELEHEQHLAHQHHQEQLAQLQRHNEALVKELDQV 597 Query: 1461 QKDLESTERQKELLSSTIKQQKQQFENCMDDLQGNELRLREHIHALKQAEEDVKNMASII 1520 + +T + L + +QQK E L + E++ AL +++N +++ Sbjct: 598 K----ATNFELGLAAQGFEQQKVVLEQKNSSLLASLQAAEENVQALGITNSELQNQLNVL 653 Query: 1521 E---KLKTQNKQKEKLIWEREMERNDSDMQLQETLLELKRVQDVKKILSDDLAHLKERLS 1577 E K KT K + ++++E+ D+ L + E+L+ Sbjct: 654 EFTHKEKTAFDSKTLTLTKQQLEQTQFDLSLTQ-----------------------EQLA 690 Query: 1578 AVEDRSQ-YTDEINRLKEELNCSLKAETNLKKEFATLKYKLETSTNDSEAKISDLLKQLD 1636 + ++Q TD++ + +LN +++ NL + L+T + + L + + Sbjct: 691 TFKQQNQSLTDKLMASETQLNHLQQSDENLTQ--------LQTQHELLQESYNKLQDEAN 742 Query: 1637 HYTKVVEMLNNEKDAISLAEKELYQKYEALNTECESLKGKIVSLTKIKQELESDLNQKTD 1696 H + NE DA Q E L +C +++ ++ L ++K E +LN + + Sbjct: 743 HTQQQFHQAQNELDAAHQQLALFKQNNEELTDKCSNIQNELHDLNRVKTNWE-NLNTEHN 801 Query: 1697 ALQISNAALSSSTQKNKEITEKIKYLEETLQ-----LQMEQNSRNGELVKTLQASCNGYK 1751 LQ A Q +I+ E LQ ++ E N + A Sbjct: 802 LLQDKYAQQKEQMQHEHSNLAQIQAEHELLQESYNKVKAELNEIQITNLNEANAQYQDLL 861 Query: 1752 DKFDDEKQKNIDLYEENQTLQKLNTDLQLQLKNLHERLSDTTEKNAWLSKIHELENMVSL 1811 ++ + + L +E Q L ++N + Q + LH ++ +A L+++ N + Sbjct: 862 SAYELLQSNHNKLKQELQVLNQVNLEKQQLAQKLHNTHQSLSQTHAELTQLQAAYNNLQA 921 Query: 1812 ETDLKYEEMKKNKSLERAVEELQTKNSQQTDVIELANK-NRSEFEEATLKYEAQISDLEK 1870 + E +++ ++ + L +N ++ N+ N S+ E K + + E Sbjct: 922 TPPVSDELLEQFNQVQLEKQRLLQQNLALVHELQYFNELNSSQTHEIKTKQDETVK--EV 979 Query: 1871 YISQQELEMKKSIRDNSSYRDKVQEMAQE 1899 I ++E+ + + RD V E ++ Sbjct: 980 IIVEKEIPVPPEKKPRLKKRDIVIENKED 1008 Score = 64.3 bits (155), Expect = 3e-12 Identities = 115/552 (20%), Positives = 222/552 (40%), Gaps = 49/552 (8%) Query: 1369 LKFEASEERVKSLEDKLKTMPLRDRTNLPVGDIIKNRDSISKYEEEIRYYKLENYKLQEI 1428 L+ + E+ K L+ + L++R L +++ ++++ + N L Sbjct: 373 LQIQLEEQLAKPLQYDQSPV-LQERIELLQNQNTNLTQELNELQQKL-FKSQNNSLLLAR 430 Query: 1429 LNESNGKLSQ-LTLDLRQSKSKEALLSEQLDRLQKDLESTERQKELLSSTIKQQKQQFEN 1487 L E N L Q L +L ++ +L +QL++LQ+D S Q E K+ ++Q Sbjct: 431 LEEENRTLKQHLQNNLPEANQLNFVLEKQLEQLQQDKHSLTLQIEQYKFDSKKHQEQLA- 489 Query: 1488 CMDDLQGNELRLREHIHALKQAEEDVKNMASIIEKLKTQNKQKEKLIWEREMERNDSDMQ 1547 + L+ L + +LKQ + + + LKT+ KQ RE + ND + + Sbjct: 490 LIPSLRSEINSLETEVISLKQTNQRLSLIERENNFLKTEIKQL------RETKLNDENTK 543 Query: 1548 LQETLLELKRVQDVKKILSDDLAHLKERLSAVEDRSQYTDEINRLKEELNCSLKAETNLK 1607 + L + + ++ +L H E+ A + + ++ R E L L Sbjct: 544 YRNLLKQYELMRADSDAKLKELEH--EQHLAHQHHQEQLAQLQRHNEALVKELDQVKATN 601 Query: 1608 KEFATLKYKLETSTNDSEAKISDLLKQLDHYTKVVEMLNNEKDAISLAEKELYQKYEALN 1667 E E E K S LL L + V+ A+ + EL + L Sbjct: 602 FELGLAAQGFEQQKVVLEQKNSSLLASLQAAEENVQ-------ALGITNSELQNQLNVLE 654 Query: 1668 -TECESLKGKIVSLTKIKQELESDLNQKTDALQISNAALSSSTQKNKEITEKIKYLEETL 1726 T E +LT KQ+LE Q L ++ L++ Q+N+ +T+K+ E L Sbjct: 655 FTHKEKTAFDSKTLTLTKQQLE----QTQFDLSLTQEQLATFKQQNQSLTDKLMASETQL 710 Query: 1727 QLQMEQNSRNGELVKT----LQASCNGYKDKFD------DEKQKNIDLYEENQTLQKLNT 1776 ++Q+ N ++T LQ S N +D+ + + Q +D + L K N Sbjct: 711 N-HLQQSDENLTQLQTQHELLQESYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNN 769 Query: 1777 -DLQLQLKNLHERLSDTTEKNAWLSKIHELENMVSLETDLKYEEMKKNKS-------LER 1828 +L + N+ L D ++ N++ + + E+M+ S Sbjct: 770 EELTDKCSNIQNELHDLNRVKTNWENLNTEHNLLQDKYAQQKEQMQHEHSNLAQIQAEHE 829 Query: 1829 AVEELQTKNSQQTDVIELANKNRSEFEEATLKYEAQISDLEKYISQQELEMKKSIRDNSS 1888 ++E K + + I++ N N EA +Y+ +S E + ++K+ ++ + Sbjct: 830 LLQESYNKVKAELNEIQITNLN-----EANAQYQDLLSAYE-LLQSNHNKLKQELQVLNQ 883 Query: 1889 YRDKVQEMAQEI 1900 + Q++AQ++ Sbjct: 884 VNLEKQQLAQKL 895 Score = 59.3 bits (142), Expect = 1e-10 Identities = 122/524 (23%), Positives = 217/524 (41%), Gaps = 92/524 (17%) Query: 1427 EILNESNGKLSQLTLDLRQSKSKEALLSEQLDRLQKDLESTERQKELLSSTIKQQKQQFE 1486 E+L N L+Q +L+Q K S L RL+++ + T+KQ Q Sbjct: 398 ELLQNQNTNLTQELNELQQKLFKSQNNSLLLARLEEE-----------NRTLKQHLQ--N 444 Query: 1487 NCMDDLQGNELRLREHIHALKQAEEDVKNMASIIEKLKTQNKQKEKLIWEREMERNDSDM 1546 N + Q N + ++ L+Q ++D ++ IE+ K +K+ ++ + R++ + Sbjct: 445 NLPEANQLNFVLEKQ----LEQLQQDKHSLTLQIEQYKFDSKKHQEQLALIPSLRSEIN- 499 Query: 1547 QLQETLLELKRVQDVKKILSDDLAHLKERLSAVEDRSQY-TDEINRLKE-ELNCSLKAET 1604 L+ ++ LK+ +RLS +E + + EI +L+E +LN Sbjct: 500 SLETEVISLKQT--------------NQRLSLIERENNFLKTEIKQLRETKLNDENTKYR 545 Query: 1605 NLKKEFATLKYKLETSTNDSEAKISDLLKQLDHYTKVVEMLNNEKDAISLAEKELYQKYE 1664 NL K++ E DS+AK LK+L+H + + E+ A +L + E Sbjct: 546 NLLKQY-------ELMRADSDAK----LKELEHEQHLAHQHHQEQLA------QLQRHNE 588 Query: 1665 ALNTECESLKGKIVSLTKIKQELESD---LNQKTDALQISNAALSSSTQ----KNKEITE 1717 AL E + +K L Q E L QK +L S A + Q N E+ Sbjct: 589 ALVKELDQVKATNFELGLAAQGFEQQKVVLEQKNSSLLASLQAAEENVQALGITNSELQN 648 Query: 1718 KIKYLE-----------ETLQL---QMEQN----SRNGELVKTLQASCNGYKDKFDDEKQ 1759 ++ LE +TL L Q+EQ S E + T + DK + Sbjct: 649 QLNVLEFTHKEKTAFDSKTLTLTKQQLEQTQFDLSLTQEQLATFKQQNQSLTDKLMASET 708 Query: 1760 KNIDLYEENQTLQKLNTDLQLQLKNLHERLSDTTEKNAWLSKIHELENMVSLETDLKYEE 1819 + L + ++ L +L T +L L+ + +L D E N + H+ +N E D +++ Sbjct: 709 QLNHLQQSDENLTQLQTQHEL-LQESYNKLQD--EANHTQQQFHQAQN----ELDAAHQQ 761 Query: 1820 MKKNKSLERAVEELQTKNSQQTDVIELANKNRSEFEEATLKYEAQISDLEKYISQQELEM 1879 + K EEL K S + + N+ ++ +E ++ L+ +QQ+ +M Sbjct: 762 LALFKQNN---EELTDKCSNIQNELHDLNRVKTNWENLNTEHNL----LQDKYAQQKEQM 814 Query: 1880 KKSIRDNSSYRDKVQEMAQEIEFWKSRYESTMIGSKNIDSNNAQ 1923 + N + E+ QE + K + E I N++ NAQ Sbjct: 815 QHE-HSNLAQIQAEHELLQE-SYNKVKAELNEIQITNLNEANAQ 856 Score = 55.1 bits (131), Expect = 2e-09 Identities = 115/565 (20%), Positives = 235/565 (41%), Gaps = 69/565 (12%) Query: 652 FKTTSSRHREQQITLLNQLASTHPHFVRCIIPNNVKKVKTFNRRLILDQLRCNGVLEGIR 711 +K S +H+EQ + L+ L S + V +K N+RL L + N + I+ Sbjct: 477 YKFDSKKHQEQ-LALIPSLRSEINS-----LETEVISLKQTNQRLSLIERENNFLKTEIK 530 Query: 712 LAREGYPN--RIAFQEFFQRYRILYPENSTTTTFSSKLKASTKQNCEFLLTSLQLDTK-- 767 RE N ++ ++Y ++ ++ + Q+ + L LQ + Sbjct: 531 QLRETKLNDENTKYRNLLKQYELMRADSDAKLKELEHEQHLAHQHHQEQLAQLQRHNEAL 590 Query: 768 VYKIGNTKLF-FKAGVLADLEKQKDVKLNNIMIKLTATIRGYT--------VRKEITYHL 818 V ++ K F+ G+ A +Q+ V L L A+++ E+ L Sbjct: 591 VKELDQVKATNFELGLAAQGFEQQKVVLEQKNSSLLASLQAAEENVQALGITNSELQNQL 650 Query: 819 QKLK-----KTRVIGNTFRLYNRLVKEDPWFNLFIRIKPLLT-SSNDMTRTKKF---NEQ 869 L+ KT T L + + E F+L + + L T + + T K Q Sbjct: 651 NVLEFTHKEKTAFDSKTLTLTKQQL-EQTQFDLSLTQEQLATFKQQNQSLTDKLMASETQ 709 Query: 870 INKLKN---DLQEMESKKKFLEEKNQKTVNELENTQDLLNQEKENLRKNESLLNRVKTSS 926 +N L+ +L +++++ + L+E K +E +TQ +Q + L L K ++ Sbjct: 710 LNHLQQSDENLTQLQTQHELLQESYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNN 769 Query: 927 ETLQKQFDDLVSEKDEISREKLEVAQNLEEAHQKIQGLQETIREREATLEKLHSKNNELI 986 E L + ++ +E +++R V N E + + LQ+ +++ ++ HS Sbjct: 770 EELTDKCSNIQNELHDLNR----VKTNWENLNTEHNLLQDKYAQQKEQMQHEHS------ 819 Query: 987 KQISDLNCDISKEQSSQSLIKESKLKLENEIKRLK----DVINSKEEEIKSFNDKLSSSE 1042 ++++ Q+ L++ES K++ E+ ++ + N++ +++ S + L S+ Sbjct: 820 --------NLAQIQAEHELLQESYNKVKAELNEIQITNLNEANAQYQDLLSAYELLQSNH 871 Query: 1043 EDLDIKLVTLEKNCNIAMSRL-QSLVTENSDLRSKNENFKKEKAALNNQLKNK--ESELL 1099 L +L L + N+ +L Q L + L + + +AA NN ELL Sbjct: 872 NKLKQELQVLNQ-VNLEKQQLAQKLHNTHQSLSQTHAELTQLQAAYNNLQATPPVSDELL 930 Query: 1100 KMKEKIDNHKKELATFSKQRDDAVSEHGKITAELKETRIQLTEYKSNYQKIKEEYSNFQR 1159 + ++ K+ L Q++ A+ + EL + Q E K+ + +E ++ Sbjct: 931 EQFNQVQLEKQRLL----QQNLALVHELQYFNELNSS--QTHEIKTKQDETVKEVIIVEK 984 Query: 1160 E-----TKEQEQKKRNSLVESLNDS 1179 E K+ KKR+ ++E+ D+ Sbjct: 985 EIPVPPEKKPRLKKRDIVIENKEDA 1009 Score = 51.6 bits (122), Expect = 2e-08 Identities = 108/622 (17%), Positives = 238/622 (38%), Gaps = 49/622 (7%) Query: 998 KEQSSQSLIKESKLKLENEIKRLKDVINSKEEEIKSFNDKLSSSEEDLDIKLVTLEKNCN 1057 +EQ ++ L + L+ I+ L++ + +E+ KL S+ + + L LE+ Sbjct: 378 EEQLAKPLQYDQSPVLQERIELLQNQNTNLTQELNELQQKLFKSQNN-SLLLARLEEENR 436 Query: 1058 IAMSRLQSLVTENSDLRSKNENFKKEKAALNNQLKNKESELLKMKE-KIDN--HKKELAT 1114 LQ+ + E + L NF EK L ++K S L++++ K D+ H+++LA Sbjct: 437 TLKQHLQNNLPEANQL-----NFVLEKQ-LEQLQQDKHSLTLQIEQYKFDSKKHQEQLAL 490 Query: 1115 FSKQRDDAVSEHGKITAELKET--RIQLTEYKSNYQKIK----EEYSNFQRETKEQEQKK 1168 R + S ++ + LK+T R+ L E ++N+ K + E TK + K Sbjct: 491 IPSLRSEINSLETEVIS-LKQTNQRLSLIERENNFLKTEIKQLRETKLNDENTKYRNLLK 549 Query: 1169 RNSLVESLNDSKIKELE-------ARLSQEISLNQYLNKRISGNSVETNIXXXXXXXXXX 1221 + L+ + +D+K+KELE ++++ Q N+ + + Sbjct: 550 QYELMRADSDAKLKELEHEQHLAHQHHQEQLAQLQRHNEALVKELDQVKATNFELGLAAQ 609 Query: 1222 XXPLDKEDIIKKYYDLQLAFTEITRXXXXXXXXXXXXXSRLRFTE-TRLASSSFEDXXXX 1280 K + +K L + ++L E T ++F+ Sbjct: 610 GFEQQKVVLEQKNSSLLASLQAAEENVQALGITNSELQNQLNVLEFTHKEKTAFDSKTLT 669 Query: 1281 XXXXXXXXXXXDMDPSIPLDSILNEPLDNCPDKESDINKLMLEVDYLKRQLDIETRAHYD 1340 D+ S+ E L + + ++ + L Sbjct: 670 LTKQQLEQTQFDL-------SLTQEQLATFKQQNQSLTDKLMASETQLNHLQQSDENLTQ 722 Query: 1341 AENAISALHSKFRKIQGESSLSSSDIYKLKFEASEERVKSLEDKLKTMPLRDRTNLPVGD 1400 + L + K+Q E++ + ++ + E + K L D+ + + Sbjct: 723 LQTQHELLQESYNKLQDEANHTQQQFHQAQNELDAAHQQLALFKQNNEELTDKCS----N 778 Query: 1401 IIKNRDSISKYEEEIRYYKLENYKLQEILNESNGKLSQLTLDLRQSKSKEALLSEQLDRL 1460 I +++ + E+ LQ+ + ++ +L Q +++ LL E +++ Sbjct: 779 IQNELHDLNRVKTNWENLNTEHNLLQDKYAQQKEQMQHEHSNLAQIQAEHELLQESYNKV 838 Query: 1461 QKDLESTERQKELLSSTIKQQKQQFENCM---DDLQGNELRLREHIHALKQAEEDVKNMA 1517 + +L E+ + + + Q+++ + + LQ N +L++ + L Q + + +A Sbjct: 839 KAEL------NEIQITNLNEANAQYQDLLSAYELLQSNHNKLKQELQVLNQVNLEKQQLA 892 Query: 1518 SIIEKLKTQNKQKEKLIWEREMERND---SDMQLQETLLELKRVQ-DVKKILSDDLAHLK 1573 + Q + + + N+ + E L + +VQ + +++L +LA + Sbjct: 893 QKLHNTHQSLSQTHAELTQLQAAYNNLQATPPVSDELLEQFNQVQLEKQRLLQQNLALVH 952 Query: 1574 ERLSAVEDRSQYTDEINRLKEE 1595 E E S T EI ++E Sbjct: 953 ELQYFNELNSSQTHEIKTKQDE 974 >SYNE-PCC-01-000727 sll1120 Length = 1200 Score = 60.5 bits (145), Expect = 5e-11 Identities = 58/299 (19%), Positives = 130/299 (43%), Gaps = 37/299 (12%) Query: 868 EQINKLKNDLQEMESKKKFLEEKNQKTVNELENTQDLLNQEKENLRKNESLLNRVKTSSE 927 +Q+ + D+Q+++ + + E ++TV + TQ L+ ++ + E Sbjct: 702 KQLRQRLQDIQQVQGRNE--ELLLERTVRSRQLTQQLMEMRQQQ--------REAQLHGE 751 Query: 928 TLQKQFDDLVSEKDEISREKLEVAQNLEEAHQKIQGLQETIREREATLEKLHSKNNELIK 987 ++ L ++ +I+++++ Q L E Q + LQ+++ E L + L Sbjct: 752 QTERDIARLSQQQTQINQQQINQQQKLAELQQNLALLQQSLPPLEQQLASAQQQLTAL-- 809 Query: 988 QISDLNCDISKEQSSQSLIKESKLKLENEIKRLKDVINSKEEEIKSFNDKLSSSEEDLDI 1047 + S+ I+ +E E +R + E+ +K L +S + L+ Sbjct: 810 -------ETSQTHQQWQTIQIQIRTVEAEYQRQLQALRQGEDHLKD----LQNSSQRLEE 858 Query: 1048 KLVTLEKNCNIAMSRLQSLVTENSDLRSKNENFKKEKAALNNQLKNKESELLKMKEKIDN 1107 K+ ++ IA + Q L L + E K A +N ++ E++L K+ EK+ + Sbjct: 859 KIAQAQEK--IAQHQAQDLT-----LAQEQEQLKIALAEMNGAIQTTEAQLAKLSEKLGS 911 Query: 1108 HKKELATFSKQRDDAVSEHGKITAELKETRIQLTEYKSNYQKIKEEYSNFQRETKEQEQ 1166 K+E RD ++ ++ ++ +E + Q + ++N Q+ +E + Q + + EQ Sbjct: 912 TKQE-------RDRLETQLNQLRSQQQEQQWQWEKLQTNQQEYQENLTQLQTQLEALEQ 963 Score = 55.1 bits (131), Expect = 2e-09 Identities = 64/372 (17%), Positives = 165/372 (44%), Gaps = 30/372 (8%) Query: 834 YNRLVKEDPWFNLFIRIKPLLTSSNDMTRTKKFNEQINKLKNDLQEMESKKKFLEEKNQK 893 YN +++ D + + K +++ +F+ +I K K L E++ + EE+ Q Sbjct: 157 YNIVLQGDVTRIITMNSKERREIIDELAGVAEFDRKIVKTKETLTEVQDR----EERCQI 212 Query: 894 TVNELENTQDLLNQEKENLRKNESLLNRVKTSSETLQKQFDDLVSEKDEISREKLEVAQN 953 ELE T + L +++ K ++L +V+ +KQ V + + +++ ++ Sbjct: 213 IATELERTLERLAADRQKAEKYQALRQQVQ------EKQGWAKVIQYKAVEQQRQKLWGQ 266 Query: 954 LEEAHQKIQGLQETIREREATLEKLHSKNNELIKQISDLNCDISKEQSSQ-SLIKESKLK 1012 LE ++ Q +Q+ + +R ++ ++ +L Q+ L + ++Q + K + + Sbjct: 267 LERDREQSQQIQQALDQRSQAIQTQQTELEKLNAQVKALGEEEQLAVAAQLATQKAQRDQ 326 Query: 1013 LENEIKRLKDVINSKEEEIKSFNDKLSSSEED-LDIK----------LVTLEKNCNIAMS 1061 L+ I + ++++ ++S S++ L I+ L LE + Sbjct: 327 LQQRYNDGDRQITNHQQQVGQIQAEISQSQQQFLHIQQEKSFHNTQTLPQLEAAVQTSQQ 386 Query: 1062 RLQSLVTENSDLRSKNENFKKEKAALNNQLKNKESELLKMKE---KIDNHKKELATFSKQ 1118 +L+ L + + S +E + +E+ L+ + + EL+ + +++ +++L T + Sbjct: 387 QLEQLRHQAQAIASASEAWVQEQTQLSRTVNQLQDELIPQRSQLAQLEERQQQLLTNLAE 446 Query: 1119 RDDAVSEHGKITAELKETRIQLTEYKSNYQKIKEEYSNFQRETKEQEQKKRNSLVESLND 1178 ++ K++ EL+E + ++ + + + + + EQ++ SL++ Sbjct: 447 LTPLLT---KVSVELEEKQFAQGQFNFQGEALTSQIQTLASDLAQLEQER--SLLQETQT 501 Query: 1179 SKIKELEARLSQ 1190 +KE + + Q Sbjct: 502 RLLKEQQEKQRQ 513 Score = 52.8 bits (125), Expect = 1e-08 Identities = 68/361 (18%), Positives = 158/361 (43%), Gaps = 34/361 (9%) Query: 1426 QEILNESNGKLSQLTLDLRQSKSKEALLSEQLDRLQKDLESTERQKELLSSTIKQQKQQF 1485 +E+L E + QLT L + + ++ ++ ++D+ +Q+ + I QQ+ Sbjct: 719 EELLLERTVRSRQLTQQLMEMRQQQREAQLHGEQTERDIARLSQQQ----TQINQQQINQ 774 Query: 1486 ENCMDDLQGNELRLREHIHALKQAEEDVKNMASIIEKLKTQNKQKEKLIWEREMERNDSD 1545 + + +LQ N L++ + L+Q + + +E +T + + I R +E Sbjct: 775 QQKLAELQQNLALLQQSLPPLEQQLASAQQQLTALETSQTHQQWQTIQIQIRTVE----- 829 Query: 1546 MQLQETLLELKRVQDVKKILSDDLAHLKERLSAVEDR-SQYTDEINRLKEELNCSLKAET 1604 + Q L L++ +D K L + L+E+++ +++ +Q+ + L +E + Sbjct: 830 AEYQRQLQALRQGEDHLKDLQNSSQRLEEKIAQAQEKIAQHQAQDLTLAQE-------QE 882 Query: 1605 NLKKEFATLKYKLETSTNDSEAKISDLLKQLDHYTKVVEMLNNEKDAISLAEKELYQKYE 1664 LK A + ++T +EA+++ L ++L + + L + + + ++E ++E Sbjct: 883 QLKIALAEMNGAIQT----TEAQLAKLSEKLGSTKQERDRLETQLNQLRSQQQEQQWQWE 938 Query: 1665 ALNTECESLKGKIVSLTKIKQELESDLNQKTDALQISNAALSSSTQKNKEITEKIKYLEE 1724 L T + + + L + LE DL + + L + N + ++ LE Sbjct: 939 KLQTNQQEYQENLTQLQTQLEALEQDLPDPWPEIPL----LQDRDEANLDFANILEELER 994 Query: 1725 TLQLQMEQNSRNGELVKTLQASCNGYK-DKFDDEKQKNIDLYEENQTLQKLNTDLQLQLK 1783 ++ RNG+ N +++ + + +L E+ QT+ T+L L+++ Sbjct: 995 SI--------RNGQKRLEAMEPVNMLALQEYEKTEARLGELSEKLQTIAGERTELLLRIE 1046 Query: 1784 N 1784 N Sbjct: 1047 N 1047 Score = 51.6 bits (122), Expect = 2e-08 Identities = 70/337 (20%), Positives = 146/337 (43%), Gaps = 29/337 (8%) Query: 1426 QEILNESNGKLSQLTLDLRQSKSKEALLSEQLDRLQKDLESTERQKELLSSTIKQQKQQF 1485 Q +N+ Q +L+Q+ ALL + L L++ L S ++Q L ++ Q QQ+ Sbjct: 764 QTQINQQQINQQQKLAELQQNL---ALLQQSLPPLEQQLASAQQQLTALETS--QTHQQW 818 Query: 1486 ENCMDDLQGNELRLREHIHALKQAEEDVKNMASIIEKLKTQNKQKEKLIWEREMERNDSD 1545 + ++ E + + AL+Q E+ +K++ + ++L+ + Q ++ I + + + Sbjct: 819 QTIQIQIRTVEAEYQRQLQALRQGEDHLKDLQNSSQRLEEKIAQAQEKIAQHQAQDLTLA 878 Query: 1546 MQLQETLLELKRVQDVKKILSDDLAHLKERL-SAVEDRSQYTDEINRLKEELNCSL---- 1600 + ++ + L + + LA L E+L S ++R + ++N+L+ + Sbjct: 879 QEQEQLKIALAEMNGAIQTTEAQLAKLSEKLGSTKQERDRLETQLNQLRSQQQEQQWQWE 938 Query: 1601 KAETNLKKEFATLKYKLETSTNDSEAKISD------LLKQLDH----YTKVVEML----- 1645 K +TN ++E+ +L+T E + D LL+ D + ++E L Sbjct: 939 KLQTN-QQEYQENLTQLQTQLEALEQDLPDPWPEIPLLQDRDEANLDFANILEELERSIR 997 Query: 1646 NNEK--DAISLAEKELYQKYEALNTECESLKGKIVSLTKIKQELESDLNQKTDALQISNA 1703 N +K +A+ Q+YE L K+ ++ + EL + T + S Sbjct: 998 NGQKRLEAMEPVNMLALQEYEKTEARLGELSEKLQTIAGERTELLLRIENFTTLRRRSFQ 1057 Query: 1704 ALSSSTQKNKEIT-EKIKYLEETLQLQMEQNSRNGEL 1739 + KN +I ++ + LQL ++ NG L Sbjct: 1058 DAFDAVNKNFQIIFAELSDGDGYLQLDDAEDPFNGGL 1094 >MJAN-DSM-01-001277 MJ1254 hypothetical protein Length = 469 Score = 53.9 bits (128), Expect = 5e-09 Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 29/199 (14%) Query: 998 KEQSSQSLIKESKLKLENEIKRLKDVINSKEEEIKS-------FNDKLSSSEEDL---DI 1047 KE+ S+ I E ++NE+ LK+ + KEEEIK+ DKLS + ++L D Sbjct: 270 KEKISKRKIIERTKNIKNELTSLKNKLKEKEEEIKNLAIKIKDLEDKLSKANKNLLNKDE 329 Query: 1048 KLVTLEKNCNIAMSRLQSLVTENSDLRSKNENFKKEKAAL---NNQLKNKESELLKMKEK 1104 + L + + S++Q L+ EN + K E+ K L N++LK+K EL + +K Sbjct: 330 IISVLNERISEYESQIQKLLDENIIYKEKIESLNKYIETLKKENDKLKDKVRELSDIAKK 389 Query: 1105 IDNHKKELATFSKQRD-----DAVSEHGKIT----------AELKETRIQLTEYKSNYQK 1149 K+ + D D + +HG IT ++ K +RI ++E + Sbjct: 390 YMEEKRGVLWSFLTEDEKIIIDLIKKHGHITQKEIVEITGMSKPKVSRI-ISELEDRKII 448 Query: 1150 IKEEYSNFQRETKEQEQKK 1168 KE+ + T +E KK Sbjct: 449 RKEKIGRINKLTLTEESKK 467 Score = 45.8 bits (107), Expect = 1e-06 Identities = 63/262 (24%), Positives = 120/262 (45%), Gaps = 32/262 (12%) Query: 791 DVKLNNIMIKLTATIRGYTVRKEITYHLQKLKKTRVIGNTFR--LYNRLVKEDPWFNLFI 848 D+ LN I T T++ YT I+Y Q + + I N + L + + LF+ Sbjct: 215 DLSLNK-EITFTITVK-YTF---ISYPGQNIIEQPAINNNLKYLLIIAIFGTAIFGGLFV 269 Query: 849 RIKPLLTSSNDMTRTKKFNEQINKLKNDLQEMES-------KKKFLEEKNQKTVNELENT 901 + K ++ + RTK ++ LKN L+E E K K LE+K K L N Sbjct: 270 KEK--ISKRKIIERTKNIKNELTSLKNKLKEKEEEIKNLAIKIKDLEDKLSKANKNLLNK 327 Query: 902 QDLLNQEKENLRKNESLLNRV-------KTSSETLQKQFDDLVSEKDEIS---REKLEVA 951 ++++ E + + ES + ++ K E+L K + L E D++ RE ++A Sbjct: 328 DEIISVLNERISEYESQIQKLLDENIIYKEKIESLNKYIETLKKENDKLKDKVRELSDIA 387 Query: 952 QNLEEAHQKIQGLQETIREREATLEKLHSKNNELI-KQISDLNCDISKEQSSQ--SLIKE 1008 + E + + L + E E + L K+ + K+I ++ +SK + S+ S +++ Sbjct: 388 KKYMEEKRGV--LWSFLTEDEKIIIDLIKKHGHITQKEIVEIT-GMSKPKVSRIISELED 444 Query: 1009 SKLKLENEIKRLKDVINSKEEE 1030 K+ + +I R+ + ++E + Sbjct: 445 RKIIRKEKIGRINKLTLTEESK 466 Score = 43.5 bits (101), Expect = 6e-06 Identities = 43/191 (22%), Positives = 93/191 (48%), Gaps = 13/191 (6%) Query: 864 KKFNEQINKLKNDLQEMESKKKFLEEKNQKTVNELENTQDLLNQEKENLRKNESLLNRVK 923 +K E+ +KN+L +++K K EE+ + ++++ +D L++ +NL + +++ + Sbjct: 276 RKIIERTKNIKNELTSLKNKLKEKEEEIKNLAIKIKDLEDKLSKANKNLLNKDEIISVLN 335 Query: 924 TSSETLQKQFDDLVSEKDEISREKLE-VAQNLEEAHQKIQGLQETIREREATLEKLHSKN 982 + Q L+ E + I +EK+E + + +E ++ L++ +RE +K + Sbjct: 336 ERISEYESQIQKLLDE-NIIYKEKIESLNKYIETLKKENDKLKDKVRELSDIAKKYMEEK 394 Query: 983 N----ELIKQISDLNCDISKEQS--SQSLIKE----SKLKLENEIKRLKDVINSKEEEIK 1032 + + + D+ K+ +Q I E SK K+ I L+D ++E+I Sbjct: 395 RGVLWSFLTEDEKIIIDLIKKHGHITQKEIVEITGMSKPKVSRIISELEDRKIIRKEKIG 454 Query: 1033 SFNDKLSSSEE 1043 N KL+ +EE Sbjct: 455 RIN-KLTLTEE 464 >SCER-S28-01-001667 ORFP:YER008C SEC3, Chr V from 167807-171817, reverse complement Length = 1336 Score = 53.1 bits (126), Expect = 8e-09 Identities = 99/424 (23%), Positives = 185/424 (43%), Gaps = 60/424 (14%) Query: 1423 YKLQEILNESNGKLSQLTLDLRQSKSKEALLSEQLD-RLQKDLESTERQKELLSSTIKQQ 1481 Y LNE N K +L +Q +++ L EQ +LQK+ E ++E +++ Sbjct: 316 YSSNSTLNEVN-KRYELEQQQQQEEAELRRLEEQKRLQLQKENEMKRLEEERRIKQEERK 374 Query: 1482 KQQFENCMDDLQGNELRLREHIHALKQAEEDVKNMASIIEKLKTQNKQKEKLIWEREMER 1541 +Q L+ E + + + A KQ E K + Q +++++L ERE+ Sbjct: 375 RQMELEHQRQLEEEERKRQMELEAKKQME----------LKRQRQFEEEQRLKKERELLE 424 Query: 1542 NDSDMQLQETLLELKRVQDVKKILSDDLAHLKERLSAVEDRSQYTDEIN----RLKEELN 1597 + QET LK+ + ++ L+ K + + V++ S YT EIN L E+LN Sbjct: 425 IQRKQREQETAERLKK--EEQEALAKKEEEEKSKRNKVDNES-YTQEINGKVDNLLEDLN 481 Query: 1598 CSLKAETNLKKEFATLKYKLETSTNDSEAKISDLLKQLDHYTKVVEMLNNE-KDAISLAE 1656 L ET Y E ST A+ D LK+ + KV + ++ D+ISL++ Sbjct: 482 AVLAEETETTPTMQNGTYVPERST----ARAHDQLKKPLNIAKVESLGGSDLNDSISLSD 537 Query: 1657 KELYQKYEALNTECESLKGKIVSLTKIKQELESDLN-QKTDALQISNAALSSSTQKNKEI 1715 + LNT +L+ Q+ ++DL+ +K D ++ SN + E+ Sbjct: 538 -----EIAGLNTS---------NLSGEDQDEKNDLSFEKGDEVRYSNNFEGEAPHVYHEV 583 Query: 1716 T---EKIKYLEETLQLQMEQNSRNGELVKTLQASCNGYKDKFDDEKQKNIDLYEENQTLQ 1772 + E+ + + L L E+N+ + L+++ K + + +NID + L Sbjct: 584 SIIQEEAPAVSQKLILP-EENNESEALIES----------KEEIKTMENIDDEVLLEILT 632 Query: 1773 KLNTDLQLQLKNLHERLSDTTEKNAWLSKIHELENMVSLE---TDLKYEEMKKNKSLERA 1829 +N ++ ++ ER+ + +L +N++SL+ +++ E K N R Sbjct: 633 DINWSIEDDADSMIERIDLRLAETEYLFN----QNLLSLQKIGPNIRPYEDKVNDECHRI 688 Query: 1830 VEEL 1833 + L Sbjct: 689 IPTL 692 >SYNE-PCC-01-001071 sll1583 Length = 562 Score = 52.8 bits (125), Expect = 1e-08 Identities = 69/319 (21%), Positives = 136/319 (42%), Gaps = 53/319 (16%) Query: 817 HLQKLKKTRVIGNTFRLYNRLVKEDPWFNLFIRIKPLLTSSNDMTRTKKFNEQINKLKND 876 H ++ + +G +L L++E+ NL R+K + N++ T+ Q+N L Sbjct: 121 HYDDIQSEKFVGLQ-KLNQELLQENT--NLSDRLKQAV---NEVAETRPKLVQLNSLVTR 174 Query: 877 LQEMESKKKFLEEKNQKTVNELENTQDLLNQEKENLRKNESLLNRVKTSSETLQKQFDDL 936 Q++ + ++E+ K + Q L +QEK +++E + + + ++Q L Sbjct: 175 NQQLSDQLSYVEQNQAKAIE-----QRLASQEKLWQQRHEQEQAQWNSQASQWEEQVRQL 229 Query: 937 VSEKDEISREKLEVAQNLEEAHQKIQGLQETIREREATLEKLHSKNNELIKQISDLNCDI 996 +E+D++ +E L+ A Q+ Q Q +A L++L + + + S L + Sbjct: 230 TAERDQVQQE-------LQTARQQSQSAQTQAENLQAALDRLGQQEEQWQGERSQLTAKL 282 Query: 997 SKEQSSQSLIKESKLKLENEIKRLKDVINSKEEEIKSFNDKLSSSEEDLDIKLVTLEKNC 1056 ++ + +Q +L L N E+K KL +++ + D +L T +K Sbjct: 283 NQLEEAQ-----KELALAN-------------AELKV---KLETTQAEGD-RLKTEKKEQ 320 Query: 1057 NIAMSRLQSLVTENSDLRSKNENFKKEKAALNNQLKNKESELLKMKEKIDNHKKELATFS 1116 A+ Q VT+ ++E AAL L + E ++ K +AT Sbjct: 321 AAALQSAQGQVTQ----------LQQELAALQENLAKAKGE---PPSEVPEKTKAVATAP 367 Query: 1117 KQRDDAVSEHGKITAELKE 1135 Q VS +T E+K+ Sbjct: 368 AQEAPVVSPSPPVTVEVKQ 386 Score = 48.9 bits (115), Expect = 1e-07 Identities = 69/278 (24%), Positives = 118/278 (42%), Gaps = 31/278 (11%) Query: 881 ESKKKFLEEKNQKTVNELENTQDLLNQEKENLRKNESLLNRVKTSSETLQKQ---FDDLV 937 + K + LE+ Q LEN NQ EN + E ++ LQ Q +DD+ Sbjct: 74 KGKLRRLEKDLQSVQASLENALAERNQLTENYQAQEKMV-------AALQHQLAHYDDIQ 126 Query: 938 SEK----DEISREKLEVAQNLEEA-HQKIQGLQETIREREATLEKLHSKNNELIKQISDL 992 SEK ++++E L+ NL + Q + + ET R + L L ++N +L Q+S + Sbjct: 127 SEKFVGLQKLNQELLQENTNLSDRLKQAVNEVAET-RPKLVQLNSLVTRNQQLSDQLSYV 185 Query: 993 NCDISK--EQSSQSLIKESKLKLENEIKRLKDVINSKEEEIKSFNDKLSSSEEDLDI--- 1047 + +K EQ S K + + E E + + EE+++ + +++L Sbjct: 186 EQNQAKAIEQRLASQEKLWQQRHEQEQAQWNSQASQWEEQVRQLTAERDQVQQELQTARQ 245 Query: 1048 ---KLVTLEKNCNIAMSRL----QSLVTENSDLRSKN---ENFKKEKAALNNQLKNKESE 1097 T +N A+ RL + E S L +K E +KE A N +LK K Sbjct: 246 QSQSAQTQAENLQAALDRLGQQEEQWQGERSQLTAKLNQLEEAQKELALANAELKVKLET 305 Query: 1098 LLKMKEKIDNHKKELATFSKQRDDAVSEHGKITAELKE 1135 +++ KKE A + V++ + A L+E Sbjct: 306 TQAEGDRLKTEKKEQAAALQSAQGQVTQLQQELAALQE 343 Score = 45.1 bits (105), Expect = 2e-06 Identities = 47/242 (19%), Positives = 104/242 (42%), Gaps = 28/242 (11%) Query: 957 AHQKIQGLQETIREREATLEKLHSKNNELIKQISDLNCDISKEQSSQSLIKESKLKLENE 1016 A K++ L++ ++ +A+LE ++ N+L + Q+ + ++ L+++ Sbjct: 73 AKGKLRRLEKDLQSVQASLENALAERNQLTENY----------QAQEKMVAA----LQHQ 118 Query: 1017 IKRLKDVINSKEEEIKSFNDKLSSSEEDLDIKL---VTLEKNCNIAMSRLQSLVTENSDL 1073 + D+ + K ++ N +L +L +L V + +L SLVT N L Sbjct: 119 LAHYDDIQSEKFVGLQKLNQELLQENTNLSDRLKQAVNEVAETRPKLVQLNSLVTRNQQL 178 Query: 1074 RSKNENFKKEKAALNNQLKNKESELLKMKEKIDNHKKELATFSKQRDDAVSEHGKITAEL 1133 + ++ +A Q + +L + + H++E A ++ Q + ++TAE Sbjct: 179 SDQLSYVEQNQAKAIEQRLASQEKLWQQR-----HEQEQAQWNSQASQWEEQVRQLTAER 233 Query: 1134 KETRIQLTEYKSNYQKIKEEYSNFQR------ETKEQEQKKRNSLVESLNDSKIKELEAR 1187 + + +L + Q + + N Q + +EQ Q +R+ L LN + + E Sbjct: 234 DQVQQELQTARQQSQSAQTQAENLQAALDRLGQQEEQWQGERSQLTAKLNQLEEAQKELA 293 Query: 1188 LS 1189 L+ Sbjct: 294 LA 295 >SYNE-PCC-01-000943 sll1424 Length = 491 Score = 52.4 bits (124), Expect = 1e-08 Identities = 42/184 (22%), Positives = 83/184 (45%), Gaps = 14/184 (7%) Query: 869 QINKLKNDLQEMESKKKFLEEKNQKTVNELENTQDLLNQEKENLRKNESLLNRVKTSSET 928 Q+ K +L++ K+ +E + E + Q+ + N K LL RV S Sbjct: 84 QLRVAKTELEQASQAKEEIESELTAVREEQQLVQERSRELNRNYTKALQLLRRVSEQSRN 143 Query: 929 LQKQFDDLVSE-------KDEISREKLEVAQNLEEAHQKIQGLQETIREREATLEKLHSK 981 L+++ +L +E KD + E E+ ++ Q++ QE I ++E L + + Sbjct: 144 LRQEVANLSAERAQLNEQKDSLLAESSELQSQVKLRDQELSKRQERIAQQEKVLARQREQ 203 Query: 982 NNELIKQISDLNCDISKEQSSQSLIKESKLKLENEIKRLKDVINSKEEEIKSFNDKLSSS 1041 L K+ + L ++ Q Q+ I + K++ +L I +K+ +I++ +KL Sbjct: 204 VQSLEKRFASLE---AQRQQLQAEINQRDTKID----QLDQAIAAKDNDIQAREEKLQGL 256 Query: 1042 EEDL 1045 E +L Sbjct: 257 ETEL 260 Score = 48.1 bits (113), Expect = 3e-07 Identities = 50/212 (23%), Positives = 101/212 (47%), Gaps = 16/212 (7%) Query: 1532 KLIWEREMERNDSDMQLQETLLELKRVQDVKKILSDDLAHLKERLSAVEDRSQYTDEINR 1591 K + E + +D QL+ EL++ K+ + +L ++E V++RS+ E+NR Sbjct: 69 KSLREGVFQLDDILAQLRVAKTELEQASQAKEEIESELTAVREEQQLVQERSR---ELNR 125 Query: 1592 ----LKEELNCSLKAETNLKKEFATLKYKLETSTNDSEAKISDLLKQLDHYTKVVEM-LN 1646 + L + NL++E A L + N+ + + +L K+ + L+ Sbjct: 126 NYTKALQLLRRVSEQSRNLRQEVANLSAE-RAQLNEQKDSLLAESSELQSQVKLRDQELS 184 Query: 1647 NEKDAISLAEKELYQKYEALNTECESLKGKIVSLTKIKQELESDLNQ---KTDALQISNA 1703 ++ I+ EK L ++ E + +SL+ + SL +Q+L++++NQ K D L + A Sbjct: 185 KRQERIAQQEKVLARQRE----QVQSLEKRFASLEAQRQQLQAEINQRDTKIDQLDQAIA 240 Query: 1704 ALSSSTQKNKEITEKIKYLEETLQLQMEQNSR 1735 A + Q +E + ++ LQ ++E+ R Sbjct: 241 AKDNDIQAREEKLQGLETELSFLQREVEELER 272 Score = 46.2 bits (108), Expect = 1e-06 Identities = 35/203 (17%), Positives = 94/203 (46%), Gaps = 5/203 (2%) Query: 984 ELIKQISDLNCDISKEQSSQSLIKESKLKLENEIKRLKDVINSKEEEIKSFNDKLSSSEE 1043 E + Q+ D+ + ++ ++K ++E+E+ +++ +E + N + + Sbjct: 73 EGVFQLDDILAQLRVAKTELEQASQAKEEIESELTAVREEQQLVQERSRELNRNYTKA-- 130 Query: 1044 DLDIKLVTLEKNCNIAMSRLQSLVTENSDLRSKNENFKKEKAALNNQLKNKESELLKMKE 1103 L + E++ N+ + +L E + L + ++ E + L +Q+K ++ EL K +E Sbjct: 131 -LQLLRRVSEQSRNLRQE-VANLSAERAQLNEQKDSLLAESSELQSQVKLRDQELSKRQE 188 Query: 1104 KIDNHKKELATFSKQRDDAVSEHGKITAELKETRIQLTEYKSNYQKIKEEYSNFQRETKE 1163 +I +K LA +Q + A+ ++ + ++ + + ++ + + + + Sbjct: 189 RIAQQEKVLARQREQVQSLEKRFASLEAQRQQLQAEINQRDTKIDQLDQAIAAKDNDIQA 248 Query: 1164 QEQKKRNSLVE-SLNDSKIKELE 1185 +E+K + E S +++ELE Sbjct: 249 REEKLQGLETELSFLQREVEELE 271 Score = 44.7 bits (104), Expect = 3e-06 Identities = 45/214 (21%), Positives = 95/214 (44%), Gaps = 10/214 (4%) Query: 1672 SLKGKIVSLTKIKQELESDLNQKTDALQISNAALSSSTQKNKEITEKIKYLEETLQLQME 1731 S G + + +K +E L+ L+++ L ++Q +EI ++ + E QL E Sbjct: 59 STLGILFTFSKSLREGVFQLDDILAQLRVAKTELEQASQAKEEIESELTAVREEQQLVQE 118 Query: 1732 QN---SRNG----ELVKTLQASCNGYKDKFDDEKQKNIDLYEENQTLQKLNTDLQLQLKN 1784 ++ +RN +L++ + + + + + L E+ +L +++LQ Q+K Sbjct: 119 RSRELNRNYTKALQLLRRVSEQSRNLRQEVANLSAERAQLNEQKDSLLAESSELQSQVKL 178 Query: 1785 LHERLSDTTEKNAWLSKI--HELENMVSLETDLKYEEMKKNKSLERAVEELQTKNSQQTD 1842 + LS E+ A K+ + E + SLE E ++ + L+ + + TK Q Sbjct: 179 RDQELSKRQERIAQQEKVLARQREQVQSLEKRFASLEAQR-QQLQAEINQRDTKIDQLDQ 237 Query: 1843 VIELANKNRSEFEEATLKYEAQISDLEKYISQQE 1876 I + + EE E ++S L++ + + E Sbjct: 238 AIAAKDNDIQAREEKLQGLETELSFLQREVEELE 271 >SCER-S28-01-002584 ORFP:YHL009W-B YHL009W-B, Chr VIII from 85904-86989,86991-91313 Length = 1802 Score = 49.3 bits (116), Expect = 1e-07 Identities = 68/342 (19%), Positives = 146/342 (42%), Gaps = 44/342 (12%) Query: 865 KFNEQINKLKNDLQEMESKKKFLEEKNQKTVNELENTQDLLNQEKENLRKNESLLNRVKT 924 K++E+++++ + +QE K + KN +N+ D + + N L V Sbjct: 1000 KYDEKVHRIPSIIQE-----KLVGSKNTIKINDENRISDRIRSKNIGSILNTGLSRCVDI 1054 Query: 925 SSETLQKQFDDLVSEKDEISREKLEVAQNLEEAHQKIQGLQETIREREATLE-KLHSKNN 983 + E++ + + + + K E+ +E+ N E + K + ++ R E L + + Sbjct: 1055 TDESITNKDESMHNAKPELIQEQFN-KTNHETSFPKEGSIGTNVKFRNTDNEISLKTGDT 1113 Query: 984 EL-IKQISDLNCDISKEQSSQSLIKESKLKLEN-EIKRLKDVINSKEEEIKSFNDKLSSS 1041 L IK + +N S + S+ K K + EN ++D+++ ++ N + ++ Sbjct: 1114 SLPIKTLESINNHHSNDYSTN---KVEKFEKENHHPPPIEDIVDMSDQTDMESNCQDGNN 1170 Query: 1042 EEDLDI--KLVTLEKNCNIAMSRLQSLVTENSDLRSKNENFKKEKAALNNQLKNKESELL 1099 ++L + K V + N++ Q++ S +++ N+ + NKE L Sbjct: 1171 LKELKVTDKNVPTDNGTNVSPRLEQNIEASGSPVQTVNK----------SAFLNKEFSSL 1220 Query: 1100 KMKEKIDNHKK--ELATFSKQRDDAVSEHGKI--------TAELKETR-IQLTEYKSNYQ 1148 MK K H K L ++ +RD S+ ++ T ++ R I E S Sbjct: 1221 NMKRKRKRHDKNNSLTSYELERDKKRSKRNRVKLIPDNMETVSAQKIRAIYYNEAISKNP 1280 Query: 1149 KIKEEYSNFQRETKEQEQKKRNSLVESLNDSKIKELEARLSQ 1190 +KE++ Q KE +++L D K+ +++ + S+ Sbjct: 1281 DLKEKHEYKQAYHKE---------LQNLKDMKVFDVDVKYSR 1313 Database: tst.fasta Posted date: Jan 29, 2007 10:10 AM Number of letters in database: 48,235 Number of sequences in database: 78 Lambda K H 0.311 0.129 0.343 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 196,522 Number of Sequences: 78 Number of extensions: 10989 Number of successful extensions: 506 Number of sequences better than 1.0e-05: 12 Number of HSP's better than 0.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 80 Number of HSP's gapped (non-prelim): 121 length of query: 1928 length of database: 48,235 effective HSP length: 77 effective length of query: 1851 effective length of database: 42,229 effective search space: 78165879 effective search space used: 78165879 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 100 (43.1 bits)