534 \N schema_version 97 156 1 species.production_name homo_sapiens 223 \N schema_type funcgen 589 \N patch patch_78_79_a.sql|schema_version 592 \N patch patch_78_79_b.sql|binding_matrix unique key 596 \N patch patch_79_80_a.sql|schema_version 597 \N patch patch_79_80_b.sql|dbfile_registry_unique_key 598 \N patch patch_79_80_c.sql|stable_id_changed_to_varchar 599 \N patch patch_80_81_a.sql|schema_version 600 \N patch patch_80_81_b.sql|add gender: mixed to table cell_type 601 \N patch patch_80_81_c.sql|drop experiment.date 602 \N patch patch_81_82_a.sql|schema_version 603 \N patch patch_82_83_a.sql|schema_version 604 \N patch patch_83_84_a.sql|schema_version 605 \N patch patch_83_84_b.sql|Drop unique key for cell_type.efo_id 606 \N patch patch_83_84_c.sql|Add not null constraint to cell_type.display_label 607 \N patch patch_83_84_d.sql|Add segmentation enum to result_set.feature_class 608 \N patch patch_83_84_e.sql|Increase length of regbuild_string.name 609 \N patch patch_83_84_f.sql|Change regulatory_feature has_evidence to activity 610 \N patch patch_84_85_a.sql|schema_version 611 \N patch patch_84_85_b.sql|rename cell_type table 612 \N patch patch_84_85_c.sql|new epigenome table columns 613 \N patch patch_84_85_d.sql|add columns to experiment table 614 \N patch patch_84_85_e.sql|add/modify columns in input_subset table 615 \N patch patch_84_85_f.sql|drop replicate column from result_set table 616 \N patch patch_84_85_g.sql|update dbentry related tables 617 \N patch patch_84_85_h.sql|Store file types along with the files. 618 \N patch patch_84_85_i.sql|Normalise regulatory feature table: Create a non redundant version of the regulatory features. 619 \N patch patch_84_85_j.sql|Normalise regulatory feature table: Create a linking table between regulatory features and feature sets. 620 \N patch patch_84_85_k.sql|Normalise regulatory feature table: Link up the new non redundant regulatory features. 621 \N patch patch_84_85_l.sql|Normalise regulatory feature table: Link up the regulatory attributes with the linking table. 622 \N patch patch_84_85_m.sql|Normalise regulatory feature table: Clean up temporary columns and tables. 623 \N patch patch_84_85_n.sql|Make activity an enum. 624 \N patch patch_84_85_o.sql|Delete all MultiCell regulatory features feature set entries. 625 \N patch patch_84_85_p.sql|Delete MultiCell feature_set and epigenome. 626 \N patch patch_84_85_q.sql|Rename table regulatory_attribute to regulatory_evidence. 627 \N patch patch_84_85_r.sql|Drop unused empty tables 628 \N patch patch_84_85_s.sql|modify table_name column in result_set_input table 629 \N patch patch_84_85_t.sql|Drop table regbuild_string 630 \N patch patch_84_85_u.sql|Remove regulatory build entries from feature_set table, relink everything else. 631 \N patch patch_84_85_v.sql|Move meta entries regarding regulatory build to the regulatory_build table 632 \N patch patch_84_85_w.sql|Extend the name length in the input_subset table 633 \N patch patch_84_85_x.sql|Remove unused columns in the experiment table 634 \N patch patch_84_85_y.sql|Table for storing epigenomes used in the regulatory build 635 \N patch patch_84_85_z.sql|Move segmentation entries from result_set table into the new segmentation_file table. 636 \N patch patch_84_85_za.sql|Move entries provided by external sources from the result_set table into the new external_feature_file table. 637 \N patch patch_84_85_zb.sql|Bugfix, the primary key was wrongly named. 638 \N patch patch_85_86_a.sql|schema_version 639 \N patch patch_85_86_b.sql|Drop tables epigenome_lineage and lineage 640 \N patch patch_85_86_c.sql|Add production name column to feature_type table 641 \N patch patch_85_86_d.sql|Add new columns to input_subset table to accommodate paired-end data 642 \N patch patch_85_86_e.sql|Add QC tables 643 \N patch patch_86_87_a.sql|schema_version 644 \N patch patch_86_87_b.sql|Change data type of certain columns to facilitate foreing key constraints 645 \N patch patch_86_87_c.sql|Remove obsolete coloumns from external_feature_file 646 \N patch patch_86_87_d.sql|Add 'unknown' as a valid gender in the epigenome table 647 \N patch patch_86_87_e.sql|Increase data_set.name length 648 \N patch patch_87_88_a.sql|schema_version 649 \N patch patch_87_88_b.sql|seq_region_name_255 650 \N patch patch_87_88_c.sql|sample_regulatory_feature_id field for regulatory build 651 \N patch patch_88_89_a.sql|schema_version 652 \N patch patch_88_89_b.sql|Created probe_seq table 653 \N patch patch_88_89_c.sql|created probe_feature_transcript table 654 \N patch patch_88_89_d.sql|created probe_transcript table 655 \N patch patch_88_89_e.sql|created probeset_transcript table 656 \N patch patch_88_89_f.sql|Removed probe features from object_xref and xref table 657 \N patch patch_88_89_g.sql|Removed probe mappings from the xref tables 658 \N patch patch_88_89_h.sql|Removed probe set mappings from the xref tables 659 \N patch patch_88_89_i.sql|New columns for array table 660 \N patch patch_88_89_j.sql|Added array_chip_id column to probe_set table 661 \N patch patch_88_89_k.sql|Added probe_seq_id column to probe table 662 \N patch patch_89_90_a.sql|schema_version 663 \N patch patch_89_90_b.sql|probe feature columns 664 \N patch patch_89_90_c.sql|Adds stable id index for probe_transcript table 665 \N patch patch_89_90_d.sql|Adds stable id index for probe_set_transcript table 666 \N patch patch_90_91_a.sql|schema_version 667 \N patch patch_90_91_b.sql|Remove sequence regions from previous releases 668 \N patch patch_90_91_c.sql|Translate sequence region ids of regulatory features 669 \N patch patch_90_91_d.sql|Replace regulatory features with updated ones 670 \N patch patch_90_91_e.sql|Translate sequence region ids of segmentation features 671 \N patch patch_90_91_f.sql|Replace segmentation features with updated ones 672 \N patch patch_90_91_g.sql|Translate sequence region ids of probe features 673 \N patch patch_90_91_h.sql|Replace probe features with updated ones 674 \N patch patch_90_91_i.sql|Translate sequence region ids of annotated features 675 \N patch patch_90_91_j.sql|Replace annotated features with updated ones 676 \N patch patch_90_91_k.sql|Translate sequence region ids of external features 677 \N patch patch_90_91_l.sql|Replace external features with updated ones 678 \N patch patch_90_91_m.sql|Translate sequence region ids of mi rna target features 679 \N patch patch_90_91_n.sql|Replace mi rna target features with updated ones 680 \N patch patch_90_91_o.sql|Translate sequence region ids of motif features 681 \N patch patch_90_91_p.sql|Replace motif features with updated ones 682 \N patch patch_90_91_q.sql|Drop seq_region table 683 \N patch patch_90_91_r.sql|Translate coord_system_ids in meta_coord table 684 \N patch patch_90_91_s.sql|Replace meta coord table with the updated table 685 \N patch patch_90_91_t.sql|Drop coord_system table 686 \N patch patch_90_91_u.sql|Set default gender to unknown for epigenomes 687 \N patch patch_90_91_v.sql|Create read_file table and populate it 688 \N patch patch_90_91_w.sql|Create read_file_experimental_configuration table and populate it 689 \N patch patch_90_91_x.sql|Rename result_set to alignment in various tables and columns 690 \N patch patch_90_91_y.sql|Rename annotated_feature to peak 691 \N patch patch_90_91_z.sql|Drop input_subset table 692 \N patch patch_90_91_za.sql|Move peak_callings from feature_set to peak_calling 693 \N patch patch_90_91_zb.sql|Rename another table 694 \N patch patch_90_91_zc.sql|Remove peak_callings from the feature_set table 695 \N patch patch_90_91_zd.sql|Drop data_set table 696 \N patch patch_90_91_ze.sql|Drop supporting_set table 697 \N patch patch_90_91_zf.sql|Drop status tables 698 \N patch patch_90_91_zg.sql|rename table dbfile_registry to data_file and change the way alignments link to it 699 \N patch patch_90_91_zh.sql|Add new columns to read_file_experimental_configuration table 700 \N patch patch_90_91_zi.sql|Create probe_id index on probe_transcript table 701 \N patch patch_91_92_a.sql|schema_version 702 \N patch patch_91_92_b.sql|Drop column paired_with from table read_file 703 \N patch patch_91_92_c.sql|Create underlying_structure table 704 \N patch patch_92_93_a.sql|schema_version 705 \N patch patch_92_93_b.sql|Allow failed peak callings 706 \N patch patch_92_93_c.sql|Allow the number of reads to be stored 707 \N patch patch_92_93_d.sql|Create table for chance quality check 708 \N patch patch_92_93_e.sql|Peak_calling table changes 709 \N patch patch_92_93_f.sql|Updates to alignment table 710 \N patch patch_92_93_g.sql|New table idr 711 \N patch patch_92_93_h.sql|execution_plan table 712 \N patch patch_92_93_i.sql|Add table to store fastqc outcomes 713 \N patch patch_92_93_j.sql|phantom peak table 714 \N patch patch_92_93_k.sql|Add table to store frip scores 715 \N patch patch_92_93_l.sql|Remove unused epigenome columns 716 \N patch patch_92_93_m.sql|Remove constraints 717 \N patch patch_92_93_n.sql|Fix ids, add missing autoincrement 718 \N patch patch_92_93_o.sql|Create peak_calling_statistic table 719 \N patch patch_92_93_p.sql|Create segmentation_state_assignment table 720 \N patch patch_92_93_q.sql|Create segmentation_state_emission table 721 \N patch patch_92_93_r.sql|Create regulatory_build_statistics table 722 \N patch patch_92_93_s.sql|drop segmentation_feature table 723 \N patch patch_92_93_t.sql|drop alignment_qc_phantom_peak table 724 \N patch patch_92_93_u.sql|Create probemapping meta table 725 \N patch patch_92_93_v.sql|Create probemapping statistic table 726 \N patch patch_92_93_w.sql|Modify index name_exp_idx from table read_file_experimental_configuration 727 \N patch patch_93_94_a.sql|schema_version 728 \N patch patch_93_94_b.sql|Modify column display_label length from epigenome table 729 \N patch patch_93_94_c.sql|Adds table segmentation_cell_table_ctcf 730 \N patch patch_93_94_d.sql|Adds table segmentation_cell_table_without_ctcf 731 \N patch patch_93_94_e.sql|Create transcription_factor table 732 \N patch patch_93_94_f.sql|Create transcription_factor_complex table 733 \N patch patch_93_94_g.sql|Create transcription_factor_complex_composition table 734 \N patch patch_93_94_h.sql|Create binding_matrix_transcription_factor_complex table 735 \N patch patch_93_94_i.sql|Modify motif_feature table 736 \N patch patch_93_94_j.sql|Create motif_feature_peak table 737 \N patch patch_93_94_k.sql|Create motif_feature_regulatory_feature table 738 \N patch patch_93_94_l.sql|Modify binding_matrix_table 739 \N patch patch_93_94_m.sql|Create binding_matrix_frequencies table 740 \N patch patch_93_94_n.sql|Modify indices in motif_feature_peak table 741 \N patch patch_93_94_o.sql|Add indices to motif_feature_regulatory_feature table 742 \N patch patch_93_94_p.sql|Modify column display_label length from epigenome table 743 \N patch patch_94_95_a.sql|schema_version 744 \N patch patch_94_95_b.sql|update to segmentation state tables 745 \N patch patch_94_95_c.sql|Update to alignment table 746 \N patch patch_94_95_d.sql|Update to execution_plan table 747 \N patch patch_94_95_e.sql|Update to regulatory_build_statistic table 748 \N patch patch_94_95_f.sql|Update to experimental_group table 749 \N patch patch_94_95_g.sql|segmentation table 750 \N patch patch_94_95_h.sql|segmentation_cell_tables 751 \N patch patch_94_95_i.sql|segmentation_statistic table 752 \N patch patch_94_95_j.sql|segmentation_file table 753 \N patch patch_94_95_k.sql|peak calling statistic table 754 \N patch patch_94_95_l.sql|Modify length for column name from epigenome table 755 \N patch patch_94_95_m.sql|drop obsolete tables 756 \N patch patch_94_95_n.sql|add unique constrain on display_label column for epigenome table 757 \N patch patch_95_96_a.sql|schema_version 758 \N patch patch_95_96_b.sql|changed data type for regulatory build statistics 759 \N patch patch_95_96_c.sql|make unique probe_id column from probe table 760 \N patch patch_95_96_d.sql|add ReadFile to the enum of the ensembl_object_type 761 \N patch patch_95_96_e.sql|Add description and release_version columns to regulatory_build table 762 \N patch patch_95_96_f.sql|Modify binding_matrix_table 763 \N patch patch_96_97_a.sql|schema_version 764 \N patch patch_96_97_b.sql|Changed to text 765 \N patch patch_96_97_c.sql|Added flag 766 \N patch patch_96_97_d.sql|Fix foreign key data type inconsistencies 767 \N patch patch_96_97_e.sql|Update mirna_target_feature 768 \N patch patch_96_97_f.sql|Add search_terms and full_name columns to epigenome table, rename display_label column to short_name and change description to TEXT