#ID name taxid source last_update nb seq_format up_from up_to taxonomy data genome genome_assembly genome_version download_date variant_available variant_source path_to_variant_files blast_available Actinidia_chinensis.Red5_PS1_1.69.0.55 Actinidia chinensis.Red5 PS1 1.69.0.46 1590841 ensemblgenomes 2020-01-16.231244 1 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;asterids;Ericales;Actinidiaceae;Actinidia;Actinidia chinensis $ENV{RSAT}/public_html/data/genomes/Actinidia_chinensis.Red5_PS1_1.69.0.55 $ENV{RSAT}/public_html/data/genomes/Actinidia_chinensis.Red5_PS1_1.69.0.55/genome/contigs.txt Aegilops_tauschii.Aetv4.0.55 Aegilops tauschii.Aetv4.0.46 200361 ensemblgenomes 2019-01-28.235054 2 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;Liliopsida;Poales;Poaceae;BOP clade;Pooideae;Triticodae;Triticeae;Triticinae;Aegilops;Aegilops tauschii $ENV{RSAT}/public_html/data/genomes/Aegilops_tauschii.Aetv4.0.55 $ENV{RSAT}/public_html/data/genomes/Aegilops_tauschii.Aetv4.0.55/genome/contigs.txt Amborella_trichopoda.AMTR1.0.55 Amborella trichopoda.AMTR1.0.46 13333 ensemblgenomes 2020-02-20.191443 3 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;Amborellales;Amborellaceae;Amborella;Amborella trichopoda $ENV{RSAT}/public_html/data/genomes/Amborella_trichopoda.AMTR1.0.55 $ENV{RSAT}/public_html/data/genomes/Amborella_trichopoda.AMTR1.0.55/genome/contigs.txt 0 0 Ananas_comosus.F153.55 Ananas comosus.F153.49 4615 ensemblgenomes 2020-12-01.130427 4 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;Liliopsida;Poales;Bromeliaceae;Bromelioideae;Ananas;Ananas comosus $ENV{RSAT}/public_html/data/genomes/Ananas_comosus.F153.55 $ENV{RSAT}/public_html/data/genomes/Ananas_comosus.F153.55/genome/contigs.txt 0 0 Arabidopsis_halleri.Ahal2.2.55 Arabidopsis halleri.Ahal2.2.46 63677 ensemblgenomes 2019-01-23.010933 5 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;rosids;malvids;Brassicales;Brassicaceae;Camelineae;Arabidopsis;Arabidopsis halleri $ENV{RSAT}/public_html/data/genomes/Arabidopsis_halleri.Ahal2.2.55 $ENV{RSAT}/public_html/data/genomes/Arabidopsis_halleri.Ahal2.2.55/genome/contigs.txt Arabidopsis_lyrata.v.1.0.55 Arabidopsis lyrata.v.1.0.46 81972 ensemblgenomes 2018-09-12.184840 6 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;rosids;malvids;Brassicales;Brassicaceae;Camelineae;Arabidopsis;Arabidopsis lyrata $ENV{RSAT}/public_html/data/genomes/Arabidopsis_lyrata.v.1.0.55 $ENV{RSAT}/public_html/data/genomes/Arabidopsis_lyrata.v.1.0.55/genome/contigs.txt Arabidopsis_thaliana.Columbia.GCF_000001735.3_TAIR10.NCBIRefseq Arabidopsis thaliana.Columbia.GCF 000001735.3 TAIR10.NCBIRefseq 3702 NCBIRefseq 2017-12-28.153714 7 filelist -1000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;rosids;malvids;Brassicales;Brassicaceae;Camelineae;Arabidopsis;Arabidopsis thaliana $ENV{RSAT}/public_html/data/genomes/Arabidopsis_thaliana.Columbia.GCF_000001735.3_TAIR10.NCBIRefseq $ENV{RSAT}/public_html/data/genomes/Arabidopsis_thaliana.Columbia.GCF_000001735.3_TAIR10.NCBIRefseq/genome/contigs.txt Arabidopsis_thaliana.TAIR10.55 Arabidopsis thaliana.TAIR10.55 3702 ensemblgenomes 2022-12-23.093158 8 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;rosids;malvids;Brassicales;Brassicaceae;Camelineae;Arabidopsis;Arabidopsis thaliana $ENV{RSAT}/public_html/data/genomes/Arabidopsis_thaliana.TAIR10.55 $ENV{RSAT}/public_html/data/genomes/Arabidopsis_thaliana.TAIR10.55/genome/contigs.txt 46 2020-01-31.120311 1 $ENV{RSAT}/public_html/data/genomes/Arabidopsis_thaliana.TAIR10.55/variations 0 Beta_vulgaris.RefBeet-1.2.2.55 Beta vulgaris.RefBeet-1.2.2.46 3555 ensemblgenomes 2018-09-13.001210 9 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;Caryophyllales;Chenopodiaceae;Betoideae;Beta;Beta vulgaris $ENV{RSAT}/public_html/data/genomes/Beta_vulgaris.RefBeet-1.2.2.55 $ENV{RSAT}/public_html/data/genomes/Beta_vulgaris.RefBeet-1.2.2.55/genome/contigs.txt Brachypodium_distachyon.556.v3.2.JGI Brachypodium distachyon.556.v3.2.JGI 15368 JGI 2023-06-12.100056 10 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;Liliopsida;Poales;Poaceae;BOP clade;Pooideae;Stipodae;Brachypodieae;Brachypodium;Brachypodium distachyon $ENV{RSAT}/public_html/data/genomes/Brachypodium_distachyon.556.v3.2.JGI $ENV{RSAT}/public_html/data/genomes/Brachypodium_distachyon.556.v3.2.JGI/genome/contigs.txt 0 0 Brachypodium_distachyon.Brachypodium_distachyon_v3.0.55 Brachypodium distachyon.Brachypodium distachyon v3.0.55 15368 ensemblgenomes 2022-12-23.093159 11 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;Liliopsida;Poales;Poaceae;BOP clade;Pooideae;Brachypodieae;Brachypodium;Brachypodium distachyon $ENV{RSAT}/public_html/data/genomes/Brachypodium_distachyon.Brachypodium_distachyon_v3.0.55 $ENV{RSAT}/public_html/data/genomes/Brachypodium_distachyon.Brachypodium_distachyon_v3.0.55/genome/contigs.txt 46 2020-01-31.114639 1 $ENV{RSAT}/public_html/data/genomes/Brachypodium_distachyon.Brachypodium_distachyon_v3.0.55/variations 0 Brachypodium_hybridum.463.v1.1.JGI Brachypodium hybridum.463.v1.1.JGI 1071398 JGI 2021-03-04.075800 12 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;Liliopsida;Poales;Poaceae;BOP clade;Pooideae;Brachypodieae;Brachypodium;Brachypodium hybridum $ENV{RSAT}/public_html/data/genomes/Brachypodium_hybridum.463.v1.1.JGI $ENV{RSAT}/public_html/data/genomes/Brachypodium_hybridum.463.v1.1.JGI/genome/contigs.txt 0 0 Brachypodium_stacei.316.v1.1.JGI Brachypodium stacei.316.v1.1.JGI 1071399 JGI 2020-07-03.115521 13 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;Liliopsida;Poales;Poaceae;BOP clade;Pooideae;Brachypodieae;Brachypodium;Brachypodium stacei $ENV{RSAT}/public_html/data/genomes/Brachypodium_stacei.316.v1.1.JGI $ENV{RSAT}/public_html/data/genomes/Brachypodium_stacei.316.v1.1.JGI/genome/contigs.txt 0 0 Brachypodium_sylvaticum.490.v1.1.JGI Brachypodium sylvaticum.490.v1.1.JGI 29664 JGI 2021-03-04.165136 14 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;Liliopsida;Poales;Poaceae;BOP clade;Pooideae;Brachypodieae;Brachypodium;Brachypodium sylvaticum $ENV{RSAT}/public_html/data/genomes/Brachypodium_sylvaticum.490.v1.1.JGI $ENV{RSAT}/public_html/data/genomes/Brachypodium_sylvaticum.490.v1.1.JGI/genome/contigs.txt 0 0 Brassica_juncea.ASM1870372v1.55 Brassica juncea.ASM1870372v1.55 3707 ensemblgenomes 2022-12-14.110354 15 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;rosids;malvids;Brassicales;Brassicaceae;Brassiceae;Brassica;Brassica juncea $ENV{RSAT}/public_html/data/genomes/Brassica_juncea.ASM1870372v1.55 $ENV{RSAT}/public_html/data/genomes/Brassica_juncea.ASM1870372v1.55/genome/contigs.txt 0 0 Brassica_napus.AST_PRJEB5043_v1.55 Brassica napus.AST PRJEB5043 v1.46 3708 ensemblgenomes 2018-09-13.092823 16 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;rosids;malvids;Brassicales;Brassicaceae;Brassiceae;Brassica;Brassica napus $ENV{RSAT}/public_html/data/genomes/Brassica_napus.AST_PRJEB5043_v1.55 $ENV{RSAT}/public_html/data/genomes/Brassica_napus.AST_PRJEB5043_v1.55/genome/contigs.txt Brassica_oleracea.BOL.55 Brassica oleracea.BOL.46 109376 ensemblgenomes 2018-09-13.194052 17 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;rosids;malvids;Brassicales;Brassicaceae;Brassiceae;Brassica;Brassica oleracea $ENV{RSAT}/public_html/data/genomes/Brassica_oleracea.BOL.55 $ENV{RSAT}/public_html/data/genomes/Brassica_oleracea.BOL.55/genome/contigs.txt Brassica_rapa_ro18.SCU_BraROA_2.3.55 Brassica rapa ro18.SCU BraROA 2.3.55 1813537 ensemblgenomes 2022-12-17.195010 18 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;rosids;malvids;Brassicales;Brassicaceae;Brassiceae;Brassica;Brassica rapa $ENV{RSAT}/public_html/data/genomes/Brassica_rapa_ro18.SCU_BraROA_2.3.55 $ENV{RSAT}/public_html/data/genomes/Brassica_rapa_ro18.SCU_BraROA_2.3.55/genome/contigs.txt 0 0 Cannabis_sativa.cs10.GCF_900626175.2.NCBI Cannabis sativa.cs10.GCF 900626175.2.NCBI 3483 NCBI 2021-06-08.074517 19 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Rosales;Cannabaceae;Cannabis;Cannabis sativa $ENV{RSAT}/public_html/data/genomes/Cannabis_sativa.cs10.GCF_900626175.2.NCBI $ENV{RSAT}/public_html/data/genomes/Cannabis_sativa.cs10.GCF_900626175.2.NCBI/genome/contigs.txt 0 0 Capsicum_annuum.ASM51225v2.55 Capsicum annuum.ASM51225v2.46 4072 ensemblgenomes 2020-01-17.054248 20 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;asterids;lamiids;Solanales;Solanaceae;Solanoideae;Capsiceae;Capsicum;Capsicum annuum $ENV{RSAT}/public_html/data/genomes/Capsicum_annuum.ASM51225v2.55 $ENV{RSAT}/public_html/data/genomes/Capsicum_annuum.ASM51225v2.55/genome/contigs.txt Chenopodium_quinoa.PI614886.392.v1.JGI Chenopodium quinoa.PI614886.392.v1.JGI 63459 JGI 2017-12-26.153336 21 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;Caryophyllales;Chenopodiaceae;Chenopodioideae;Atripliceae;Chenopodium;Chenopodium quinoa $ENV{RSAT}/public_html/data/genomes/Chenopodium_quinoa.PI614886.392.v1.JGI $ENV{RSAT}/public_html/data/genomes/Chenopodium_quinoa.PI614886.392.v1.JGI/genome/contigs.txt Chlamydomonas_reinhardtii.Chlamydomonas_reinhardtii_v5.5.55 Chlamydomonas reinhardtii.Chlamydomonas reinhardtii v5.5.46 3055 ensemblgenomes 2018-09-14.101949 22 filelist -3000 -1 Eukaryota;Viridiplantae;Chlorophyta;Chlorophyceae;Chlamydomonadales;Chlamydomonadaceae;Chlamydomonas;Chlamydomonas reinhardtii $ENV{RSAT}/public_html/data/genomes/Chlamydomonas_reinhardtii.Chlamydomonas_reinhardtii_v5.5.55 $ENV{RSAT}/public_html/data/genomes/Chlamydomonas_reinhardtii.Chlamydomonas_reinhardtii_v5.5.55/genome/contigs.txt Chondrus_crispus.ASM35022v2.55 Chondrus crispus.ASM35022v2.46 2769 ensemblgenomes 2018-09-14.115514 23 filelist -1000 -1 Eukaryota;Rhodophyta;Florideophyceae;Rhodymeniophycidae;Gigartinales;Gigartinaceae;Chondrus;Chondrus crispus $ENV{RSAT}/public_html/data/genomes/Chondrus_crispus.ASM35022v2.55 $ENV{RSAT}/public_html/data/genomes/Chondrus_crispus.ASM35022v2.55/genome/contigs.txt Cicer_arietinum.ASM33114v1.GCF_000331145.1.RefSeq Cicer arietinum.ASM33114v1.GCF 000331145.1.RefSeq 3827 RefSeq 2021-08-20.110524 24 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Fabales;Fabaceae;Papilionoideae;50 kb inversion clade;NPAAA clade;Hologalegina;IRL clade;Cicereae;Cicer;Cicer arietinum $ENV{RSAT}/public_html/data/genomes/Cicer_arietinum.ASM33114v1.GCF_000331145.1.RefSeq $ENV{RSAT}/public_html/data/genomes/Cicer_arietinum.ASM33114v1.GCF_000331145.1.RefSeq/genome/contigs.txt 0 0 Citrus_clementina.Citrus_clementina_v1.0.55 Citrus clementina.Citrus clementina v1.0.46 85681 ensemblgenomes 2020-01-18.085232 25 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;rosids;malvids;Sapindales;Rutaceae;Aurantioideae;Citrus;Citrus clementina $ENV{RSAT}/public_html/data/genomes/Citrus_clementina.Citrus_clementina_v1.0.55 $ENV{RSAT}/public_html/data/genomes/Citrus_clementina.Citrus_clementina_v1.0.55/genome/contigs.txt Coffea_canephora.AUK_PRJEB4211_v1.55 Coffea canephora.AUK PRJEB4211 v1.46 49390 ensemblgenomes 2020-01-18.123631 26 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;asterids;lamiids;Gentianales;Rubiaceae;Ixoroideae;Gardenieae complex;Bertiereae - Coffeeae clade;Coffeeae;Coffea;Coffea canephora $ENV{RSAT}/public_html/data/genomes/Coffea_canephora.AUK_PRJEB4211_v1.55 $ENV{RSAT}/public_html/data/genomes/Coffea_canephora.AUK_PRJEB4211_v1.55/genome/contigs.txt Corchorus_capsularis.CCACVL1_1.0.55 Corchorus capsularis.CCACVL1 1.0.46 210143 ensemblgenomes 2018-09-14.125918 27 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;rosids;malvids;Malvales;Malvaceae;Grewioideae;Apeibeae;Corchorus;Corchorus capsularis $ENV{RSAT}/public_html/data/genomes/Corchorus_capsularis.CCACVL1_1.0.55 $ENV{RSAT}/public_html/data/genomes/Corchorus_capsularis.CCACVL1_1.0.55/genome/contigs.txt Corylus_avellana.CavTom2PMs-1.0.55 Corylus avellana.CavTom2PMs-1.0.55 13451 ensemblgenomes 2022-12-18.001950 28 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Fagales;Betulaceae;Corylus;Corylus avellana $ENV{RSAT}/public_html/data/genomes/Corylus_avellana.CavTom2PMs-1.0.55 $ENV{RSAT}/public_html/data/genomes/Corylus_avellana.CavTom2PMs-1.0.55/genome/contigs.txt 0 0 Cucumis_melo.Melonv4.60 Cucumis melo.Melonv4.57 3656 ensemblgenomes 2023-11-03.161349 29 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Cucurbitales;Cucurbitaceae;Benincaseae;Cucumis;Cucumis melo $ENV{RSAT}/public_html/data/genomes/Cucumis_melo.Melonv4.60 $ENV{RSAT}/public_html/data/genomes/Cucumis_melo.Melonv4.60/genome/contigs.txt 0 0 Cucumis_sativus.ASM407v2.55 Cucumis sativus.ASM407v2.46 3659 ensemblgenomes 2018-09-14.164530 30 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Cucurbitales;Cucurbitaceae;Benincaseae;Cucumis;Cucumis sativus $ENV{RSAT}/public_html/data/genomes/Cucumis_sativus.ASM407v2.55 $ENV{RSAT}/public_html/data/genomes/Cucumis_sativus.ASM407v2.55/genome/contigs.txt Cyanidioschyzon_merolae.ASM9120v1.55 Cyanidioschyzon merolae.ASM9120v1.46 280699 ensemblgenomes 2018-09-14.192025 31 filelist -1000 -1 Eukaryota;Rhodophyta;Bangiophyceae;Cyanidiales;Cyanidiaceae;Cyanidioschyzon;Cyanidioschyzon merolae $ENV{RSAT}/public_html/data/genomes/Cyanidioschyzon_merolae.ASM9120v1.55 $ENV{RSAT}/public_html/data/genomes/Cyanidioschyzon_merolae.ASM9120v1.55/genome/contigs.txt Cynara_cardunculus.CcrdV1.55 Cynara cardunculus.CcrdV1.46 59895 ensemblgenomes 2020-01-18.174503 32 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;asterids;campanulids;Asterales;Asteraceae;Carduoideae;Cardueae;Carduinae;Cynara;Cynara cardunculus $ENV{RSAT}/public_html/data/genomes/Cynara_cardunculus.CcrdV1.55 $ENV{RSAT}/public_html/data/genomes/Cynara_cardunculus.CcrdV1.55/genome/contigs.txt Daucus_carota.ASM162521v1.55 Daucus carota.ASM162521v1.46 79200 ensemblgenomes 2018-09-14.194114 33 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;asterids;campanulids;Apiales;Apiaceae;Apioideae;Scandiceae;Daucinae;Daucus;Daucus sect. Daucus;Daucus carota $ENV{RSAT}/public_html/data/genomes/Daucus_carota.ASM162521v1.55 $ENV{RSAT}/public_html/data/genomes/Daucus_carota.ASM162521v1.55/genome/contigs.txt Digitaria_exilis.Fonio_CM05836.55 Digitaria exilis.Fonio CM05836.55 1010633 ensemblgenomes 2022-12-17.063248 34 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;Liliopsida;Poales;Poaceae;PACMAD clade;Panicoideae;Panicodae;Paniceae;Anthephorinae;Digitaria;Digitaria exilis $ENV{RSAT}/public_html/data/genomes/Digitaria_exilis.Fonio_CM05836.55 $ENV{RSAT}/public_html/data/genomes/Digitaria_exilis.Fonio_CM05836.55/genome/contigs.txt 0 0 Dioscorea_rotundata.TDr96_F1_Pseudo_Chromosome_v1.0.55 Dioscorea rotundata.TDr96 F1 Pseudo Chromosome v1.0.46 55577 ensemblgenomes 2020-01-16.185912 35 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;Liliopsida;Dioscoreales;Dioscoreaceae;Dioscorea;Dioscorea rotundata $ENV{RSAT}/public_html/data/genomes/Dioscorea_rotundata.TDr96_F1_Pseudo_Chromosome_v1.0.55 $ENV{RSAT}/public_html/data/genomes/Dioscorea_rotundata.TDr96_F1_Pseudo_Chromosome_v1.0.55/genome/contigs.txt Drosophila_melanogaster Drosophila melanogaster 7227 2018-01-18.100419 36 filelist -3000 -1 Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora $ENV{RSAT}/public_html/data/genomes/Drosophila_melanogaster $ENV{RSAT}/public_html/data/genomes/Drosophila_melanogaster/genome/contigs.txt Echinochloa_crusgalli.ec_v3.55 Echinochloa crusgalli.ec v3.55 90397 ensemblgenomes 2022-12-16.160021 37 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;Liliopsida;Poales;Poaceae;PACMAD clade;Panicoideae;Panicodae;Paniceae;Boivinellinae;Echinochloa;Echinochloa crus-galli $ENV{RSAT}/public_html/data/genomes/Echinochloa_crusgalli.ec_v3.55 $ENV{RSAT}/public_html/data/genomes/Echinochloa_crusgalli.ec_v3.55/genome/contigs.txt 0 0 Eragrostis_tef.ASM97063v1.55 Eragrostis tef.ASM97063v1.46 110835 ensemblgenomes 2020-01-19.001626 38 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;Liliopsida;Poales;Poaceae;PACMAD clade;Chloridoideae;Eragrostideae;Eragrostidinae;Eragrostis;Eragrostis tef $ENV{RSAT}/public_html/data/genomes/Eragrostis_tef.ASM97063v1.55 $ENV{RSAT}/public_html/data/genomes/Eragrostis_tef.ASM97063v1.55/genome/contigs.txt Escherichia_coli_GCF_000005845.2_ASM584v2 Escherichia coli GCF 000005845.2 ASM584v2 511145 NCBI-Refseq 2018-01-26.100521 39 filelist -400 -1 Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia $ENV{RSAT}/public_html/data/genomes/Escherichia_coli_GCF_000005845.2_ASM584v2 $ENV{RSAT}/public_html/data/genomes/Escherichia_coli_GCF_000005845.2_ASM584v2/genome/contigs.txt Escherichia_coli_K_12_substr__MG1655_uid57779 Escherichia coli K 12 substr MG1655 uid57779 511145 NCBI 2018-01-18.083316 40 filelist -400 -1 Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia $ENV{RSAT}/public_html/data/genomes/Escherichia_coli_K_12_substr__MG1655_uid57779 $ENV{RSAT}/public_html/data/genomes/Escherichia_coli_K_12_substr__MG1655_uid57779/genome/contigs.txt Fagus_sylvatica.Bhaga_Chr.v2.SBiKF Fagus sylvatica.Bhaga Chr.v2.SBiKF 28930 SBiKF 2023-08-21.151500 41 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Fagales;Fagaceae;Fagus;Fagus sylvatica $ENV{RSAT}/public_html/data/genomes/Fagus_sylvatica.Bhaga_Chr.v2.SBiKF $ENV{RSAT}/public_html/data/genomes/Fagus_sylvatica.Bhaga_Chr.v2.SBiKF/genome/contigs.txt 0 0 Ficus_carica.UNIPI_FiCari_1.0.55 Ficus carica.UNIPI FiCari 1.0.55 3494 ensemblgenomes 2022-12-18.041718 42 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Rosales;Moraceae;Ficus;Ficus carica $ENV{RSAT}/public_html/data/genomes/Ficus_carica.UNIPI_FiCari_1.0.55 $ENV{RSAT}/public_html/data/genomes/Ficus_carica.UNIPI_FiCari_1.0.55/genome/contigs.txt 0 0 Fragaria_vesca.Hawaii4.Fvb2.0.GDR Fragaria vesca.Hawaii4.Fvb2.0.GDR 101020 GDR 2017-12-15.123142 43 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Rosales;Rosaceae;Rosoideae;Potentilleae;Fragariinae;Fragaria;Fragaria vesca $ENV{RSAT}/public_html/data/genomes/Fragaria_vesca.Hawaii4.Fvb2.0.GDR $ENV{RSAT}/public_html/data/genomes/Fragaria_vesca.Hawaii4.Fvb2.0.GDR/genome/contigs.txt Galdieria_sulphuraria.ASM34128v1.55 Galdieria sulphuraria.ASM34128v1.46 130081 ensemblgenomes 2018-09-15.043515 44 filelist -1000 -1 Eukaryota;Rhodophyta;Bangiophyceae;Cyanidiales;Cyanidiaceae;Galdieria;Galdieria sulphuraria $ENV{RSAT}/public_html/data/genomes/Galdieria_sulphuraria.ASM34128v1.55 $ENV{RSAT}/public_html/data/genomes/Galdieria_sulphuraria.ASM34128v1.55/genome/contigs.txt Glycine_max.Glycine_max_v2.1.55 Glycine max.Glycine max v2.1.46 3847 ensemblgenomes 2019-01-23.040920 45 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Fabales;Fabaceae;Papilionoideae;50 kb inversion clade;NPAAA clade;indigoferoid/millettioid clade;Phaseoleae;Glycine; $ENV{RSAT}/public_html/data/genomes/Glycine_max.Glycine_max_v2.1.55 $ENV{RSAT}/public_html/data/genomes/Glycine_max.Glycine_max_v2.1.55/genome/contigs.txt Gossypium_raimondii.Graimondii2_0.55 Gossypium raimondii.Graimondii2 0.46 29730 ensemblgenomes 2018-09-15.155912 46 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;rosids;malvids;Malvales;Malvaceae;Malvoideae;Gossypium;Gossypium raimondii $ENV{RSAT}/public_html/data/genomes/Gossypium_raimondii.Graimondii2_0.55 $ENV{RSAT}/public_html/data/genomes/Gossypium_raimondii.Graimondii2_0.55/genome/contigs.txt Helianthus_annuus.HanXRQr2.0-SUNRISE.55 Helianthus annuus.HanXRQr2.0-SUNRISE.55 4232 ensemblgenomes 2022-12-23.093159 47 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;asterids;campanulids;Asterales;Asteraceae;Asteroideae;Heliantheae alliance;Heliantheae;Helianthus;Helianthus annuus $ENV{RSAT}/public_html/data/genomes/Helianthus_annuus.HanXRQr2.0-SUNRISE.55 $ENV{RSAT}/public_html/data/genomes/Helianthus_annuus.HanXRQr2.0-SUNRISE.55/genome/contigs.txt 55 2022-12-23.091451 1 $ENV{RSAT}/public_html/data/genomes/Helianthus_annuus.HanXRQr2.0-SUNRISE.55/variations 0 Hordeum_vulgare.MorexV3_pseudomolecules_assembly.55 Hordeum vulgare.MorexV3 pseudomolecules assembly.55 112509 ensemblgenomes 2022-12-23.093200 50 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;Liliopsida;Poales;Poaceae;BOP clade;Pooideae;Triticodae;Triticeae;Hordeinae;Hordeum;Hordeum vulgare $ENV{RSAT}/public_html/data/genomes/Hordeum_vulgare.MorexV3_pseudomolecules_assembly.55 $ENV{RSAT}/public_html/data/genomes/Hordeum_vulgare.MorexV3_pseudomolecules_assembly.55/genome/contigs.txt 55 2022-12-23.091802 1 $ENV{RSAT}/public_html/data/genomes/Hordeum_vulgare.MorexV3_pseudomolecules_assembly.55/variations 0 Ipomoea_triloba.ASM357664v1.55 Ipomoea triloba.ASM357664v1.46 35885 ensemblgenomes 2020-01-19.061435 51 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;asterids;lamiids;Solanales;Convolvulaceae;Ipomoeeae;Ipomoea;Ipomoea triloba $ENV{RSAT}/public_html/data/genomes/Ipomoea_triloba.ASM357664v1.55 $ENV{RSAT}/public_html/data/genomes/Ipomoea_triloba.ASM357664v1.55/genome/contigs.txt Klebsormidium_nitens.NIES2285.171026.v11.TITECH Klebsormidium nitens.NIES2285.171026.v11.TITECH 105231 TITECH 2017-12-13.125201 52 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Klebsormidiophyceae;Klebsormidiales;Klebsormidiaceae;Klebsormidium;Klebsormidium nitens $ENV{RSAT}/public_html/data/genomes/Klebsormidium_nitens.NIES2285.171026.v11.TITECH $ENV{RSAT}/public_html/data/genomes/Klebsormidium_nitens.NIES2285.171026.v11.TITECH/genome/contigs.txt Lactuca_sativa.Lsat_Salinas_v7.55 Lactuca sativa.Lsat Salinas v7.55 4236 ensemblgenomes 2022-12-18.082504 53 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;asterids;campanulids;Asterales;Asteraceae;Cichorioideae;Cichorieae;Lactucinae;Lactuca;Lactuca sativa $ENV{RSAT}/public_html/data/genomes/Lactuca_sativa.Lsat_Salinas_v7.55 $ENV{RSAT}/public_html/data/genomes/Lactuca_sativa.Lsat_Salinas_v7.55/genome/contigs.txt 0 0 Leersia_perrieri.Lperr_V1.4.55 Leersia perrieri.Lperr V1.4.46 77586 ensemblgenomes 2018-09-19.160118 54 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;Liliopsida;Poales;Poaceae;BOP clade;Oryzoideae;Oryzeae;Oryzinae;Leersia;Leersia perrieri $ENV{RSAT}/public_html/data/genomes/Leersia_perrieri.Lperr_V1.4.55 $ENV{RSAT}/public_html/data/genomes/Leersia_perrieri.Lperr_V1.4.55/genome/contigs.txt Lolium_perenne.MPB_Lper_Kyuss_1697.55 Lolium perenne.MPB Lper Kyuss 1697.55 4522 ensemblgenomes 2022-12-13.163012 55 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;Liliopsida;Poales;Poaceae;BOP clade;Pooideae;Poodae;Poeae;Poeae Chloroplast Group 2 (Poeae type);Loliinae;Lolium;Lolium perenne $ENV{RSAT}/public_html/data/genomes/Lolium_perenne.MPB_Lper_Kyuss_1697.55 $ENV{RSAT}/public_html/data/genomes/Lolium_perenne.MPB_Lper_Kyuss_1697.55/genome/contigs.txt 0 0 Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI Lupinus albus.CNRS Lalb 10.GCA 009771035.1.NCBI 3870 NCBI 2021-12-10.095509 56 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Fabales;Fabaceae;Papilionoideae;50 kb inversion clade;genistoids sensu lato;core genistoids;Genisteae;Lupinus;Lupinus albus $ENV{RSAT}/public_html/data/genomes/Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI $ENV{RSAT}/public_html/data/genomes/Lupinus_albus.CNRS_Lalb_10.GCA_009771035.1.NCBI/genome/contigs.txt 0 0 Lupinus_albus.La_Amiga31.GCA_010261695.1.NCBI Lupinus albus.La Amiga31.GCA 010261695.1.NCBI 3870 NCBI 2021-12-09.150853 57 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Fabales;Fabaceae;Papilionoideae;50 kb inversion clade;genistoids sensu lato;core genistoids;Genisteae;Lupinus;Lupinus albus $ENV{RSAT}/public_html/data/genomes/Lupinus_albus.La_Amiga31.GCA_010261695.1.NCBI $ENV{RSAT}/public_html/data/genomes/Lupinus_albus.La_Amiga31.GCA_010261695.1.NCBI/genome/contigs.txt 0 0 Lupinus_angustifolius.LupAngTanjil_v1.0.55 Lupinus angustifolius.LupAngTanjil v1.0.46 3871 ensemblgenomes 2019-01-24.013043 58 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Fabales;Fabaceae;Papilionoideae;50 kb inversion clade;genistoids sensu lato;core genistoids;Genisteae;Lupinus;Lupinus angustifolius $ENV{RSAT}/public_html/data/genomes/Lupinus_angustifolius.LupAngTanjil_v1.0.55 $ENV{RSAT}/public_html/data/genomes/Lupinus_angustifolius.LupAngTanjil_v1.0.55/genome/contigs.txt Malus_domestica.GDDH13.1-1.GDR Malus domestica.GDDH13.1-1.GDR 3750 GDR 2024-02-01.161135 59 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Rosales;Rosaceae;Amygdaloideae;Maleae;Malus;Malus domestica $ENV{RSAT}/public_html/data/genomes/Malus_domestica.GDDH13.1-1.GDR $ENV{RSAT}/public_html/data/genomes/Malus_domestica.GDDH13.1-1.GDR/genome/contigs.txt 0 0 Malus_domestica_golden.ASM211411v1.60 Malus domestica golden.ASM211411v1.58 3750 ensemblgenomes 2024-01-30.160704 60 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Rosales;Rosaceae;Amygdaloideae;Maleae;Malus;Malus domestica $ENV{RSAT}/public_html/data/genomes/Malus_domestica_golden.ASM211411v1.60 $ENV{RSAT}/public_html/data/genomes/Malus_domestica_golden.ASM211411v1.60/genome/contigs.txt 0 0 Manihot_esculenta.Manihotesculentav6.55 Manihot esculenta.Manihot esculenta v6.46 3983 ensemblgenomes 2018-09-20.010528 61 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Malpighiales;Euphorbiaceae;Crotonoideae;Manihoteae;Manihot;Manihot esculenta $ENV{RSAT}/public_html/data/genomes/Manihot_esculenta.Manihotesculentav6.55 $ENV{RSAT}/public_html/data/genomes/Manihot_esculenta.Manihotesculentav6.55/genome/contigs.txt Marchantia_polymorpha.Marchanta_polymorpha_v1.55 Marchantia polymorpha.Marchanta polymorpha v1.46 3197 ensemblgenomes 2020-01-16.111958 62 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Marchantiophyta;Marchantiopsida;Marchantiidae;Marchantiales;Marchantiaceae;Marchantia;Marchantia polymorpha $ENV{RSAT}/public_html/data/genomes/Marchantia_polymorpha.Marchanta_polymorpha_v1.55 $ENV{RSAT}/public_html/data/genomes/Marchantia_polymorpha.Marchanta_polymorpha_v1.55/genome/contigs.txt Medicago_truncatula.MedtrA17_4.0.55 Medicago truncatula.MedtrA17 4.0.46 3880 ensemblgenomes 2018-09-20.064737 63 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Fabales;Fabaceae;Papilionoideae;Trifolieae;Medicago;Medicago truncatula $ENV{RSAT}/public_html/data/genomes/Medicago_truncatula.MedtrA17_4.0.55 $ENV{RSAT}/public_html/data/genomes/Medicago_truncatula.MedtrA17_4.0.55/genome/contigs.txt Musa_acuminata.ASM31385v1.55 Musa acuminata.ASM31385v1.46 214687 ensemblgenomes 2018-09-20.123840 64 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;Liliopsida;Zingiberales;Musaceae;Musa;Musa acuminata $ENV{RSAT}/public_html/data/genomes/Musa_acuminata.ASM31385v1.55 $ENV{RSAT}/public_html/data/genomes/Musa_acuminata.ASM31385v1.55/genome/contigs.txt Nicotiana_attenuata.NIATTr2.55 Nicotiana attenuata.NIATTr2.46 49451 ensemblgenomes 2018-09-20.175121 65 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;asterids;lamiids;Solanales;Solanaceae;Nicotianoideae;Nicotianeae;Nicotiana;Nicotiana attenuata $ENV{RSAT}/public_html/data/genomes/Nicotiana_attenuata.NIATTr2.55 $ENV{RSAT}/public_html/data/genomes/Nicotiana_attenuata.NIATTr2.55/genome/contigs.txt Nicotiana_tabacum.TN90.GCF_000715135.1.NCBI Nicotiana tabacum.TN90.GCF 000715135.1.NCBI 4097 NCBI 2020-09-16.164904 66 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;asterids;lamiids;Solanales;Solanaceae;Nicotianoideae;Nicotianeae;Nicotiana;Nicotiana tabacum $ENV{RSAT}/public_html/data/genomes/Nicotiana_tabacum.TN90.GCF_000715135.1.NCBI $ENV{RSAT}/public_html/data/genomes/Nicotiana_tabacum.TN90.GCF_000715135.1.NCBI/genome/contigs.txt 0 0 Olea_europaea.OLEA9.55 Olea europaea.OLEA9.52 158383 ensemblgenomes 2022-02-24.130433 67 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;asterids;lamiids;Lamiales;Oleaceae;Oleeae;Olea;Olea europaea $ENV{RSAT}/public_html/data/genomes/Olea_europaea.OLEA9.55 $ENV{RSAT}/public_html/data/genomes/Olea_europaea.OLEA9.55/genome/contigs.txt 0 0 Olea_europaea.sylvestris.451.v1.JGI Olea europaea.sylvestris.451.v1.JGI 158386 JGI 2017-12-26.153508 68 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;asterids;lamiids;Lamiales;Oleaceae;Oleeae;Olea;Olea europaea $ENV{RSAT}/public_html/data/genomes/Olea_europaea.sylvestris.451.v1.JGI $ENV{RSAT}/public_html/data/genomes/Olea_europaea.sylvestris.451.v1.JGI/genome/contigs.txt Oryza_barthii.O.barthii_v1.55 Oryza barthii.O.barthii v1.46 65489 ensemblgenomes 2018-09-21.052721 69 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;Liliopsida;Poales;Poaceae;BOP clade;Oryzoideae;Oryzeae;Oryzinae;Oryza;Oryza barthii $ENV{RSAT}/public_html/data/genomes/Oryza_barthii.O.barthii_v1.55 $ENV{RSAT}/public_html/data/genomes/Oryza_barthii.O.barthii_v1.55/genome/contigs.txt Oryza_brachyantha.Oryza_brachyantha.v1.4b.55 Oryza brachyantha.Oryza brachyantha.v1.4b.46 4533 ensemblgenomes 2018-09-21.094007 70 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;Liliopsida;Poales;Poaceae;BOP clade;Oryzoideae;Oryzeae;Oryzinae;Oryza;Oryza brachyantha $ENV{RSAT}/public_html/data/genomes/Oryza_brachyantha.Oryza_brachyantha.v1.4b.55 $ENV{RSAT}/public_html/data/genomes/Oryza_brachyantha.Oryza_brachyantha.v1.4b.55/genome/contigs.txt Oryza_glaberrima.Oryza_glaberrima_V1.55 Oryza glaberrima.Oryza_glaberrima_V1.46 4538 ensemblgenomes 2018-09-21.131326 71 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;Liliopsida;Poales;Poaceae;BOP clade;Oryzoideae;Oryzeae;Oryzinae;Oryza;Oryza glaberrima $ENV{RSAT}/public_html/data/genomes/Oryza_glaberrima.Oryza_glaberrima_V1.55 $ENV{RSAT}/public_html/data/genomes/Oryza_glaberrima.Oryza_glaberrima_V1.55/genome/contigs.txt Oryza_glumipatula.Oryza_glumaepatula_v1.5.55 Oryza glumipatula.Oryza_glumaepatula_v1.5.46 40148 ensemblgenomes 2018-09-21.185041 72 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;Liliopsida;Poales;Poaceae;BOP clade;Oryzoideae;Oryzeae;Oryzinae;Oryza;Oryza glumipatula $ENV{RSAT}/public_html/data/genomes/Oryza_glumipatula.Oryza_glumaepatula_v1.5.55 $ENV{RSAT}/public_html/data/genomes/Oryza_glumipatula.Oryza_glumaepatula_v1.5.55/genome/contigs.txt Oryza_indica.ASM465v1.55 Oryza indica.ASM465v1.55 39946 ensemblgenomes 2022-12-23.093200 73 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;Liliopsida;Poales;Poaceae;BOP clade;Oryzoideae;Oryzeae;Oryzinae;Oryza;Oryza sativa;Oryza sativa Indica Group $ENV{RSAT}/public_html/data/genomes/Oryza_indica.ASM465v1.55 $ENV{RSAT}/public_html/data/genomes/Oryza_indica.ASM465v1.55/genome/contigs.txt 46 2020-01-31.121831 1 $ENV{RSAT}/public_html/data/genomes/Oryza_indica.ASM465v1.55/variations 0 Oryza_longistaminata.O_longistaminata_v1.0.55 Oryza longistaminata.O longistaminata v1.0.46 4528 ensemblgenomes 2018-09-22.062108 74 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;Liliopsida;Poales;Poaceae;BOP clade;Oryzoideae;Oryzeae;Oryzinae;Oryza;Oryza longistaminata $ENV{RSAT}/public_html/data/genomes/Oryza_longistaminata.O_longistaminata_v1.0.55 $ENV{RSAT}/public_html/data/genomes/Oryza_longistaminata.O_longistaminata_v1.0.55/genome/contigs.txt Oryza_meridionalis.Oryza_meridionalis_v1.3.55 Oryza meridionalis.Oryza meridionalis v1.3.46 40149 ensemblgenomes 2018-09-22.100514 75 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;Liliopsida;Poales;Poaceae;BOP clade;Oryzoideae;Oryzeae;Oryzinae;Oryza;Oryza meridionalis $ENV{RSAT}/public_html/data/genomes/Oryza_meridionalis.Oryza_meridionalis_v1.3.55 $ENV{RSAT}/public_html/data/genomes/Oryza_meridionalis.Oryza_meridionalis_v1.3.55/genome/contigs.txt Oryza_nivara.Oryza_nivara_v1.0.55 Oryza nivara.Oryza_nivara_v1.0.46 4536 ensemblgenomes 2018-09-22.135120 76 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;Liliopsida;Poales;Poaceae;BOP clade;Oryzoideae;Oryzeae;Oryzinae;Oryza;Oryza nivara $ENV{RSAT}/public_html/data/genomes/Oryza_nivara.Oryza_nivara_v1.0.55 $ENV{RSAT}/public_html/data/genomes/Oryza_nivara.Oryza_nivara_v1.0.55/genome/contigs.txt Oryza_punctata.Oryza_punctata_v1.2.55 Oryza punctata.Oryza_punctata_v1.2.46 4537 ensemblgenomes 2018-09-22.181853 77 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;Liliopsida;Poales;Poaceae;BOP clade;Oryzoideae;Oryzeae;Oryzinae;Oryza;Oryza punctata $ENV{RSAT}/public_html/data/genomes/Oryza_punctata.Oryza_punctata_v1.2.55 $ENV{RSAT}/public_html/data/genomes/Oryza_punctata.Oryza_punctata_v1.2.55/genome/contigs.txt Oryza_rufipogon.OR_W1943.55 Oryza rufipogon.OR W1943.46 4529 ensemblgenomes 2018-09-22.232110 78 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;Liliopsida;Poales;Poaceae;BOP clade;Oryzoideae;Oryzeae;Oryzinae;Oryza;Oryza rufipogon $ENV{RSAT}/public_html/data/genomes/Oryza_rufipogon.OR_W1943.55 $ENV{RSAT}/public_html/data/genomes/Oryza_rufipogon.OR_W1943.55/genome/contigs.txt Oryza_sativa.IRGSP-1.0.55 Oryza sativa.IRGSP-1.0.55 39947 ensemblgenomes 2022-12-23.093200 79 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;Liliopsida;Poales;Poaceae;BOP clade;Oryzoideae;Oryzeae;Oryzinae;Oryza;Oryza sativa;Oryza sativa Japonica Group $ENV{RSAT}/public_html/data/genomes/Oryza_sativa.IRGSP-1.0.55 $ENV{RSAT}/public_html/data/genomes/Oryza_sativa.IRGSP-1.0.55/genome/contigs.txt 46 2020-01-31.121708 1 $ENV{RSAT}/public_html/data/genomes/Oryza_sativa.IRGSP-1.0.55/variations 0 Ostreococcus_lucimarinus.ASM9206v1.55 Ostreococcus lucimarinus.ASM9206v1.46 436017 ensemblgenomes 2018-09-23.104035 80 filelist -3000 -1 Eukaryota;Viridiplantae;Chlorophyta;prasinophytes;Mamiellophyceae;Mamiellales;Bathycoccaceae;Ostreococcus; $ENV{RSAT}/public_html/data/genomes/Ostreococcus_lucimarinus.ASM9206v1.55 $ENV{RSAT}/public_html/data/genomes/Ostreococcus_lucimarinus.ASM9206v1.55/genome/contigs.txt Panicum_hallii_fil2.PHallii_v3.1.55 Panicum hallii fil2.PHallii v3.1.46 206008 ensemblgenomes 2020-01-19.112402 81 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;Liliopsida;Poales;Poaceae;PACMAD clade;Panicoideae;Panicodae;Paniceae;Panicinae;Panicum;Panicum sect. Panicum;Panicum hallii $ENV{RSAT}/public_html/data/genomes/Panicum_hallii_fil2.PHallii_v3.1.55 $ENV{RSAT}/public_html/data/genomes/Panicum_hallii_fil2.PHallii_v3.1.55/genome/contigs.txt Phaseolus_vulgaris.442.v2.JGI Phaseolus vulgaris.442.v2.JGI 3885 JGI 2024-05-24.095113 82 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Fabales;Fabaceae;Papilionoideae;50 kb inversion clade;NPAAA clade;indigoferoid/millettioid clade;Phaseoleae;Phaseolus;Phaseolus vulgaris $ENV{RSAT}/public_html/data/genomes/Phaseolus_vulgaris.442.v2.JGI $ENV{RSAT}/public_html/data/genomes/Phaseolus_vulgaris.442.v2.JGI/genome/contigs.txt 0 0 Phaseolus_vulgaris.PhaVulg1_0.55 Phaseolus vulgaris.PhaVulg1 0.46 3885 ensemblgenomes 2018-09-23.110938 83 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Fabales;Fabaceae;Papilionoideae;Phaseoleae;Phaseolus;Phaseolus vulgaris $ENV{RSAT}/public_html/data/genomes/Phaseolus_vulgaris.PhaVulg1_0.55 $ENV{RSAT}/public_html/data/genomes/Phaseolus_vulgaris.PhaVulg1_0.55/genome/contigs.txt Physcomitrium_patens.PhypaV3.55 Physcomitrium patens.PhypaV3.55 3218 ensemblgenomes 2022-12-20.202837 84 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Bryophyta;Bryophytina;Bryopsida;Funariidae;Funariales;Funariaceae;Physcomitrium;Physcomitrium patens $ENV{RSAT}/public_html/data/genomes/Physcomitrium_patens.PhypaV3.55 $ENV{RSAT}/public_html/data/genomes/Physcomitrium_patens.PhypaV3.55/genome/contigs.txt 0 0 Plasmodium_berghei.PBANKA01.34 Plasmodium berghei.PBANKA01.34 2023-10-09.085354 85 filelist -1000 -1 Eukaryota;Viridiplantae;dummy;hack;this;is;not;plant;Alveolata;Apicomplexa;Aconoidasida;Haemosporida;Plasmodium; $ENV{RSAT}/public_html/data/genomes/Plasmodium_berghei.PBANKA01.34 $ENV{RSAT}/public_html/data/genomes/Plasmodium_berghei.PBANKA01.34/genome/contigs.txt 0 0 Populus_trichocarpa.Pop_tri_v3.55 Populus trichocarpa.Pop tri v3.46 3694 ensemblgenomes 2018-09-23.212527 86 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Malpighiales;Salicaceae;Saliceae;Populus;Populus trichocarpa $ENV{RSAT}/public_html/data/genomes/Populus_trichocarpa.Pop_tri_v3.55 $ENV{RSAT}/public_html/data/genomes/Populus_trichocarpa.Pop_tri_v3.55/genome/contigs.txt Prunus_avium.PAV_r1.0.55 Prunus avium.PAV r1.0.46 42229 ensemblgenomes 2020-01-19.172234 87 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Rosales;Rosaceae;Amygdaloideae;Amygdaleae;Prunus;Prunus avium $ENV{RSAT}/public_html/data/genomes/Prunus_avium.PAV_r1.0.55 $ENV{RSAT}/public_html/data/genomes/Prunus_avium.PAV_r1.0.55/genome/contigs.txt Prunus_avium.Satonishiki.PAV_r1.0.GDR Prunus avium.Satonishiki.PAV r1.0.GDR 42229 GDR 2017-12-15.122137 88 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Rosales;Rosaceae;Maloideae;Amygdaleae;Prunus;Prunus avium $ENV{RSAT}/public_html/data/genomes/Prunus_avium.Satonishiki.PAV_r1.0.GDR $ENV{RSAT}/public_html/data/genomes/Prunus_avium.Satonishiki.PAV_r1.0.GDR/genome/contigs.txt Prunus_dulcis.ALMONDv2.60 Prunus dulcis.ALMONDv2.57 3755 ensemblgenomes 2023-10-09.160508 89 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Rosales;Rosaceae;Amygdaloideae;Amygdaleae;Prunus;Prunus dulcis $ENV{RSAT}/public_html/data/genomes/Prunus_dulcis.ALMONDv2.60 $ENV{RSAT}/public_html/data/genomes/Prunus_dulcis.ALMONDv2.60/genome/contigs.txt 0 0 Prunus_mume.BJFU1210120008.GCF_000346735.1.NCBIRefseq Prunus mume.BJFU1210120008.GCF 000346735.1.NCBIRefseq 102107 NCBIRefseq 2017-12-01.135550 90 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Rosales;Rosaceae;Maloideae;Amygdaleae;Prunus;Prunus mume $ENV{RSAT}/public_html/data/genomes/Prunus_mume.BJFU1210120008.GCF_000346735.1.NCBIRefseq $ENV{RSAT}/public_html/data/genomes/Prunus_mume.BJFU1210120008.GCF_000346735.1.NCBIRefseq/genome/contigs.txt Prunus_persica.Prunus_persica_NCBIv2.38 Prunus persica.Prunus persica NCBIv2.38 3760 ensemblgenomes 2018-01-16.093948 91 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Rosales;Rosaceae;Maloideae;Amygdaleae;Prunus;Prunus persica $ENV{RSAT}/public_html/data/genomes/Prunus_persica.Prunus_persica_NCBIv2.38 $ENV{RSAT}/public_html/data/genomes/Prunus_persica.Prunus_persica_NCBIv2.38/genome/contigs.txt Prunus_persica.Prunus_persica_NCBIv2.55 Prunus persica.Prunus persica NCBIv2.46 3760 ensemblgenomes 2018-09-24.024848 92 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Rosales;Rosaceae;Amygdaloideae;Amygdaleae;Prunus;Prunus persica $ENV{RSAT}/public_html/data/genomes/Prunus_persica.Prunus_persica_NCBIv2.55 $ENV{RSAT}/public_html/data/genomes/Prunus_persica.Prunus_persica_NCBIv2.55/genome/contigs.txt Prunus_persica.Prupe1_0.37 Prunus persica.Prupe1 0.37 3760 ensemblgenomes 2017-12-12.104732 93 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Rosales;Rosaceae;Maloideae;Amygdaleae;Prunus;Prunus persica $ENV{RSAT}/public_html/data/genomes/Prunus_persica.Prupe1_0.37 $ENV{RSAT}/public_html/data/genomes/Prunus_persica.Prupe1_0.37/genome/contigs.txt Quercus_suber.CorkOak1.0.60 Quercus suber.CorkOak1.0.57 58331 ensemblgenomes 2023-10-06.121257 94 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Fagales;Fagaceae;Quercus;Quercus suber $ENV{RSAT}/public_html/data/genomes/Quercus_suber.CorkOak1.0.60 $ENV{RSAT}/public_html/data/genomes/Quercus_suber.CorkOak1.0.60/genome/contigs.txt 0 0 Saccharomyces_cerevisiae Saccharomyces cerevisiae 4932 NCBI 2018-01-18.083128 95 filelist -800 -1 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces $ENV{RSAT}/public_html/data/genomes/Saccharomyces_cerevisiae $ENV{RSAT}/public_html/data/genomes/Saccharomyces_cerevisiae/genome/contigs.txt Saccharum_spontaneum.Sspon.HiC_chr_asm.55 Saccharum spontaneum.Sspon.HiC chr asm.46 62335 ensemblgenomes 2020-01-19.213841 96 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;Liliopsida;Poales;Poaceae;PACMAD clade;Panicoideae;Andropogonodae;Andropogoneae;Saccharinae;Saccharum;Saccharum officinarum complex;Saccharum spontaneum $ENV{RSAT}/public_html/data/genomes/Saccharum_spontaneum.Sspon.HiC_chr_asm.55 $ENV{RSAT}/public_html/data/genomes/Saccharum_spontaneum.Sspon.HiC_chr_asm.55/genome/contigs.txt 0 0 Secale_cereale.Rye_Lo7_2018_v1p1p1.60 Secale cereale.Rye Lo7 2018 v1p1p1.57 4550 ensemblgenomes 2023-12-04.122048 97 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;Liliopsida;Poales;Poaceae;BOP clade;Pooideae;Triticodae;Triticeae;Hordeinae;Secale;Secale cereale $ENV{RSAT}/public_html/data/genomes/Secale_cereale.Rye_Lo7_2018_v1p1p1.60 $ENV{RSAT}/public_html/data/genomes/Secale_cereale.Rye_Lo7_2018_v1p1p1.60/genome/contigs.txt 0 0 Selaginella_moellendorffii.v1.0.55 Selaginella moellendorffii.v1.0.46 88036 ensemblgenomes 2018-09-24.055855 98 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Lycopodiopsida;Selaginellales;Selaginellaceae;Selaginella;Selaginella moellendorffii $ENV{RSAT}/public_html/data/genomes/Selaginella_moellendorffii.v1.0.55 $ENV{RSAT}/public_html/data/genomes/Selaginella_moellendorffii.v1.0.55/genome/contigs.txt Setaria_italica.Setaria_italica_v2.0.55 Setaria italica.Setaria italica v2.0.46 4555 ensemblgenomes 2018-09-24.091150 99 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;Liliopsida;Poales;Poaceae;PACMAD clade;Panicoideae;Panicodae;Paniceae;Cenchrinae;Setaria;Setaria italica $ENV{RSAT}/public_html/data/genomes/Setaria_italica.Setaria_italica_v2.0.55 $ENV{RSAT}/public_html/data/genomes/Setaria_italica.Setaria_italica_v2.0.55/genome/contigs.txt Solanum_lycopersicum.ITAG4.0.JGI Solanum lycopersicum.ITAG4.0.JGI 4081 JGI 2023-11-13.132822 100 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;asterids;lamiids;Solanales;Solanaceae;Solanoideae;Solaneae;Solanum;Solanum subgen. Lycopersicon $ENV{RSAT}/public_html/data/genomes/Solanum_lycopersicum.ITAG4.0.JGI $ENV{RSAT}/public_html/data/genomes/Solanum_lycopersicum.ITAG4.0.JGI/genome/contigs.txt 0 0 Solanum_lycopersicum.SL3.0.55 Solanum lycopersicum.SL3.0.55 4081 ensemblgenomes 2022-12-23.093201 101 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;asterids;lamiids;Solanales;Solanaceae;Solanoideae;Solaneae;Solanum; $ENV{RSAT}/public_html/data/genomes/Solanum_lycopersicum.SL3.0.55 $ENV{RSAT}/public_html/data/genomes/Solanum_lycopersicum.SL3.0.55/genome/contigs.txt 46 2020-01-31.101355 1 $ENV{RSAT}/public_html/data/genomes/Solanum_lycopersicum.SL3.0.55/variations 0 Solanum_lycopersicum.SL5.0.SGN Solanum lycopersicum.SL5.0.SGN 4081 SGN 2023-04-26.093518 102 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;asterids;lamiids;Solanales;Solanaceae;Solanoideae;Solaneae;Solanum;Solanum subgen. Lycopersicon $ENV{RSAT}/public_html/data/genomes/Solanum_lycopersicum.SL5.0.SGN $ENV{RSAT}/public_html/data/genomes/Solanum_lycopersicum.SL5.0.SGN/genome/contigs.txt 0 0 Solanum_tuberosum.DM.v4.03.PGSC Solanum tuberosum.DM.v4.03.PGSC 4113 GDR 2018-04-24.225854 103 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;asterids;lamiids;Solanales;Solanaceae;Solanoideae;Solaneae;Solanum;Solanum tuberosum $ENV{RSAT}/public_html/data/genomes/Solanum_tuberosum.DM.v4.03.PGSC $ENV{RSAT}/public_html/data/genomes/Solanum_tuberosum.DM.v4.03.PGSC/genome/contigs.txt Solanum_tuberosum.SolTub_3.0.55 Solanum tuberosum.SolTub 3.0.46 4113 ensemblgenomes 2018-09-24.221724 104 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;asterids;lamiids;Solanales;Solanaceae;Solanoideae;Solaneae;Solanum;Solanum tuberosum $ENV{RSAT}/public_html/data/genomes/Solanum_tuberosum.SolTub_3.0.55 $ENV{RSAT}/public_html/data/genomes/Solanum_tuberosum.SolTub_3.0.55/genome/contigs.txt Sorghum_bicolor.Sorghum_bicolor_NCBIv3.55 Sorghum bicolor.Sorghum bicolor NCBIv3.55 4558 ensemblgenomes 2022-12-23.093201 105 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;Liliopsida;Poales;Poaceae;PACMAD clade;Panicoideae;Andropogonodae;Andropogoneae;Sorghinae;Sorghum;Sorghum bicolor $ENV{RSAT}/public_html/data/genomes/Sorghum_bicolor.Sorghum_bicolor_NCBIv3.55 $ENV{RSAT}/public_html/data/genomes/Sorghum_bicolor.Sorghum_bicolor_NCBIv3.55/genome/contigs.txt 46 2020-01-31.122053 1 $ENV{RSAT}/public_html/data/genomes/Sorghum_bicolor.Sorghum_bicolor_NCBIv3.55/variations 0 Theobroma_cacao.Theobroma_cacao_20110822.60 Theobroma cacao.Theobroma cacao 20110822.57 3641 ensemblgenomes 2023-12-07.121847 106 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;rosids;malvids;Malvales;Malvaceae;Byttnerioideae;Theobroma;Theobroma cacao $ENV{RSAT}/public_html/data/genomes/Theobroma_cacao.Theobroma_cacao_20110822.60 $ENV{RSAT}/public_html/data/genomes/Theobroma_cacao.Theobroma_cacao_20110822.60/genome/contigs.txt 0 0 Trifolium_pratense.Trpr.55 Trifolium pratense.Trpr.46 57577 ensemblgenomes 2018-09-25.172839 107 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Fabales;Fabaceae;Papilionoideae;Trifolieae;Trifolium;Trifolium pratense $ENV{RSAT}/public_html/data/genomes/Trifolium_pratense.Trpr.55 $ENV{RSAT}/public_html/data/genomes/Trifolium_pratense.Trpr.55/genome/contigs.txt Triticum_aestivum.IWGSC.55 Triticum aestivum.IWGSC.55 4565 ensemblgenomes 2022-12-23.093201 108 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;Liliopsida;Poales;Poaceae;BOP clade;Pooideae;Triticodae;Triticeae;Triticinae;Triticum;Triticum aestivum $ENV{RSAT}/public_html/data/genomes/Triticum_aestivum.IWGSC.55 $ENV{RSAT}/public_html/data/genomes/Triticum_aestivum.IWGSC.55/genome/contigs.txt 46 2022-12-23.092649 1 $ENV{RSAT}/public_html/data/genomes/Triticum_aestivum.IWGSC.55/variations 0 Triticum_turgidum.svevo.55 Triticum turgidum.svevo.55 4567 ensemblgenomes 2022-12-23.093202 110 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;Liliopsida;Poales;Poaceae;BOP clade;Pooideae;Triticodae;Triticeae;Triticinae;Triticum;Triticum turgidum $ENV{RSAT}/public_html/data/genomes/Triticum_turgidum.svevo.55 $ENV{RSAT}/public_html/data/genomes/Triticum_turgidum.svevo.55/genome/contigs.txt 46 2020-01-30.183040 1 $ENV{RSAT}/public_html/data/genomes/Triticum_turgidum.svevo.55/variations 0 Triticum_urartu.Tu2.0.55 Triticum urartu.Tu2.0.55 4572 ensemblgenomes 2022-12-15.024059 111 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;Liliopsida;Poales;Poaceae;BOP clade;Pooideae;Triticodae;Triticeae;Triticinae;Triticum;Triticum urartu $ENV{RSAT}/public_html/data/genomes/Triticum_urartu.Tu2.0.55 $ENV{RSAT}/public_html/data/genomes/Triticum_urartu.Tu2.0.55/genome/contigs.txt 0 0 Vigna_angularis.Vigan1.1.55 Vigna angularis.Vigan1.1.46 3914 ensemblgenomes 2020-02-20.133327 112 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Fabales;Fabaceae;Papilionoideae;50 kb inversion clade;NPAAA clade;indigoferoid/millettioid clade;Phaseoleae;Vigna;Vigna angularis $ENV{RSAT}/public_html/data/genomes/Vigna_angularis.Vigan1.1.55 $ENV{RSAT}/public_html/data/genomes/Vigna_angularis.Vigan1.1.55/genome/contigs.txt 0 0 Vigna_radiata.Vradiata_ver6.55 Vigna radiata.Vradiata ver6.46 3916 ensemblgenomes 2019-01-23.151211 113 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliophyta;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Fabales;Fabaceae;Papilionoideae;50 kb inversion clade;NPAAA clade;indigoferoid/millettioid clade;Phaseoleae;Vigna;Vigna radiata $ENV{RSAT}/public_html/data/genomes/Vigna_radiata.Vradiata_ver6.55 $ENV{RSAT}/public_html/data/genomes/Vigna_radiata.Vradiata_ver6.55/genome/contigs.txt Vigna_unguiculata.ASM411807v1.55 Vigna unguiculata.ASM411807v1.55 3917 ensemblgenomes 2022-12-17.142630 114 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;rosids;fabids;Fabales;Fabaceae;Papilionoideae;50 kb inversion clade;NPAAA clade;indigoferoid/millettioid clade;Phaseoleae;Vigna;Vigna unguiculata $ENV{RSAT}/public_html/data/genomes/Vigna_unguiculata.ASM411807v1.55 $ENV{RSAT}/public_html/data/genomes/Vigna_unguiculata.ASM411807v1.55/genome/contigs.txt 0 0 Vitis_vinifera.PN40024.v4.55 Vitis vinifera.PN40024.v4.55 29760 ensemblgenomes 2022-12-23.093202 115 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;eudicotyledons;Gunneridae;Pentapetalae;rosids;Vitales;Vitaceae;Viteae;Vitis;Vitis vinifera $ENV{RSAT}/public_html/data/genomes/Vitis_vinifera.PN40024.v4.55 $ENV{RSAT}/public_html/data/genomes/Vitis_vinifera.PN40024.v4.55/genome/contigs.txt 55 2022-12-23.091917 1 $ENV{RSAT}/public_html/data/genomes/Vitis_vinifera.PN40024.v4.55/variations 0 Zea_mays.Zm-B73-REFERENCE-NAM-5.0.55 Zea mays.Zm-B73-REFERENCE-NAM-5.0.55 4577 ensemblgenomes 2022-12-23.093202 116 filelist -3000 -1 Eukaryota;Viridiplantae;Streptophyta;Embryophyta;Tracheophyta;Spermatophyta;Magnoliopsida;Liliopsida;Poales;Poaceae;PACMAD 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