; matrix-from-patterns  -v 1 -logo -seq $RSAT/public_html/tmp/www-data/2025/01/15/tmp_sequence_2025-01-15.084346_XKODIj.fasta -format fasta -asmb $RSAT/public_html/tmp/www-data/2025/01/15/oligo-analysis_2025-01-15.084346_0ixh3k.asmb -min_weight 5 -flanks 2 -max_asmb_nb 20 -cluster sig -uth Pval 0.00025 -bginput -markov 0 -o $RSAT/public_html/tmp/www-data/2025/01/15/oligo-analysis_2025-01-15.084346_0ixh3k_pssm
; Input files
;	assembly	/var/www/html/rsat/public_html/tmp/www-data/2025/01/15/oligo-analysis_2025-01-15.084346_0ixh3k.asmb
;	sequence	/var/www/html/rsat/public_html/tmp/www-data/2025/01/15/tmp_sequence_2025-01-15.084346_XKODIj.fasta
; Output files
;	links	/var/www/html/rsat/public_html/tmp/www-data/2025/01/15/oligo-analysis_2025-01-15.084346_0ixh3k_pssm_count_matrices_links.txt
;	sig_matrices	/var/www/html/rsat/public_html/tmp/www-data/2025/01/15/oligo-analysis_2025-01-15.084346_0ixh3k_pssm_sig_matrices.tf
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/01/15/oligo-analysis_2025-01-15.084346_0ixh3k_pssm
;	err	/var/www/html/rsat/public_html/tmp/www-data/2025/01/15/oligo-analysis_2025-01-15.084346_0ixh3k_pssm_err.txt
;	log	/var/www/html/rsat/public_html/tmp/www-data/2025/01/15/oligo-analysis_2025-01-15.084346_0ixh3k_pssm_log.txt
;	count_matrices	/var/www/html/rsat/public_html/tmp/www-data/2025/01/15/oligo-analysis_2025-01-15.084346_0ixh3k_pssm_count_matrices.txt
;	count_matrices_tf	/var/www/html/rsat/public_html/tmp/www-data/2025/01/15/oligo-analysis_2025-01-15.084346_0ixh3k_pssm_count_matrices.tf
;	gibbs_matrices	/var/www/html/rsat/public_html/tmp/www-data/2025/01/15/oligo-analysis_2025-01-15.084346_0ixh3k_pssm_gibbs_matrices.txt
;	logo_basename	/var/www/html/rsat/public_html/tmp/www-data/2025/01/15/oligo-analysis_2025-01-15.084346_0ixh3k_pssm_count_matrices_logo
;	assembly	/var/www/html/rsat/public_html/tmp/www-data/2025/01/15/oligo-analysis_2025-01-15.084346_0ixh3k.asmb
;	sig_sites	/var/www/html/rsat/public_html/tmp/www-data/2025/01/15/oligo-analysis_2025-01-15.084346_0ixh3k_pssm_sig_sites.ft
;	sig_matrices_split	/var/www/html/rsat/public_html/tmp/www-data/2025/01/15/oligo-analysis_2025-01-15.084346_0ixh3k_pssm_sig_matrices_split_matrix_list.tab
; Number of assemblies	0
; Number of assembled patterns	0
; Host name	rsat
; Job started	2025-01-15.084347
; Job done	2025-01-15.084347
; Seconds	0.08
;	user	0.08
;	system	0
;	cuser	0
;	csystem	0