; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2025/01/16/oligo-analysis_2025-01-16.074144_vy41Jr_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/01/16/oligo-analysis_2025-01-16.074144_vy41Jr_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/01/16/oligo-analysis_2025-01-16.074144_vy41Jr_pssm_count_matrices_links.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2025/01/16/oligo-analysis_2025-01-16.074144_vy41Jr_pssm_count_matrices.tf
; Input format tf
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2025/01/16/oligo-analysis_2025-01-16.074144_vy41Jr_pssm_count_matrices_links.txt
; Output format tab
; pseudo-weight 1
a 117 149 38 0 0 663 0 0 452 33 186 172
c 231 182 42 663 0 0 396 0 211 260 139 158
g 193 209 231 0 663 0 267 663 0 342 214 179
t 122 123 352 0 0 0 0 0 0 28 124 154
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/01/16//oligo-analysis_2025-01-16.074144_vy41Jr_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/01/16//oligo-analysis_2025-01-16.074144_vy41Jr_pssm_count_matrices_logo_m1_rc.png
;
a 10 19 7 3 25 3 3 55 0 2 59 2 1 6 3 4 25 8 3 14 1 14 20
c 32 11 37 33 17 5 61 6 2 59 3 0 59 18 45 38 6 35 48 10 14 29 11
g 15 16 14 27 13 53 0 2 62 3 1 62 4 16 12 20 26 16 10 34 42 18 21
t 7 18 6 1 9 3 0 1 0 0 1 0 0 24 4 2 7 5 3 6 7 3 12
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/01/16//oligo-analysis_2025-01-16.074144_vy41Jr_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/01/16//oligo-analysis_2025-01-16.074144_vy41Jr_pssm_count_matrices_logo_m2_rc.png
;
a 117 66 26 19 15 20 152 10 8 20 12 23 166 66 86
c 115 149 355 117 449 15 16 453 31 17 454 166 16 187 146
g 160 151 84 221 5 446 306 14 432 435 15 287 223 130 184
t 93 119 20 128 16 4 11 8 14 13 4 9 80 102 69
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/01/16//oligo-analysis_2025-01-16.074144_vy41Jr_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/01/16//oligo-analysis_2025-01-16.074144_vy41Jr_pssm_count_matrices_logo_m3_rc.png
;
a 18 22 3 1 3 12 4 5 10 3 2 49 21
c 58 57 14 149 7 137 8 143 134 154 6 41 57
g 53 51 4 5 147 8 142 8 8 3 150 41 56
t 32 31 140 6 4 4 7 5 9 1 3 30 27
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/01/16//oligo-analysis_2025-01-16.074144_vy41Jr_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/01/16//oligo-analysis_2025-01-16.074144_vy41Jr_pssm_count_matrices_logo_m4_rc.png
;
a 145 189 25 26 25 5 13 613 33 40 205 143
c 209 106 544 582 21 30 624 13 31 63 172 175
g 175 172 63 31 13 624 30 21 582 544 106 209
t 143 205 40 33 613 13 5 25 26 25 189 145
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/01/16//oligo-analysis_2025-01-16.074144_vy41Jr_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/01/16//oligo-analysis_2025-01-16.074144_vy41Jr_pssm_count_matrices_logo_m5_rc.png
;
a 16 16 13 5 9 46 4 2 10 2 3 6 0 3 10 3 55 12 10
c 38 26 17 36 22 38 75 3 9 90 9 8 85 0 73 12 14 35 35
g 25 26 11 46 61 7 10 86 75 3 83 78 8 89 8 78 19 27 36
t 18 29 56 10 5 6 8 6 3 2 2 5 4 5 6 4 9 23 16
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/01/16//oligo-analysis_2025-01-16.074144_vy41Jr_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/01/16//oligo-analysis_2025-01-16.074144_vy41Jr_pssm_count_matrices_logo_m6_rc.png
;
; Host name rsat
; Job started 2025-01-16.074205
; Job done 2025-01-16.074207
; Seconds 0.19
; user 0.19
; system 0.07
; cuser 1.4
; csystem 0.29