AC  assembly_1
XX
ID  cttatctctga
XX
DE  nnCTTATCTCTGAnn
P0           a         c         g         t
1         0.00      0.00      0.00      0.00
2         0.00      0.00      0.00      0.00
3         0.00     87.40      0.00      0.00
4         0.00      0.00      0.00     87.40
5         0.00      0.00      0.00     87.40
6        87.40      0.00      0.00      0.00
7         0.00      0.00      0.00     87.40
8         0.00     87.40      0.00      0.00
9         0.00      0.00      0.00     62.90
10        0.00     40.18      0.00      0.00
11        0.00      0.00      0.00      9.59
12        0.00      0.00      7.30      0.00
13        7.30      0.00      0.00      0.00
14        0.00      0.00      0.00      0.00
15        0.00      0.00      0.00      0.00
XX
CC  program: pattern-assembly
CC  matrix.nb: 1
CC  id: assembly_1
CC  name: cttatctctga
CC  asmb.seed: cttatc
CC  matrix.nb: 1
CC  sites: 6
CC  consensus.strict: --CTTATCTCTGA--
CC  consensus.strict.rc: --TCAGAGATAAG--
CC  consensus.IUPAC: nnCTTATCTCTGAnn
CC  consensus.IUPAC.rc: NNTCAGAGATAAGNN
CC  consensus.regexp: [acgt][acgt]CTTATCTCTGA[acgt][acgt]
CC  consensus.regexp.rc: [ACGT][ACGT]TCAGAGATAAG[ACGT][ACGT]
XX
//
AC  assembly_2
XX
ID  cctgataag
XX
DE  nnCCTGATAAGnn
P0           a         c         g         t
1         0.00      0.00      0.00      0.00
2         0.00      0.00      0.00      0.00
3         0.00      9.37      0.00      0.00
4         0.00     39.99      0.00      0.00
5         0.00      0.00      0.00     39.99
6         0.00      0.00     87.40      0.00
7        87.40      0.00      0.00      0.00
8         0.00      0.00      0.00     87.40
9        87.40      0.00      0.00      0.00
10       87.40      0.00      0.00      0.00
11        0.00      0.00     87.40      0.00
12        0.00      0.00      0.00      0.00
13        0.00      0.00      0.00      0.00
XX
CC  program: pattern-assembly
CC  matrix.nb: 2
CC  id: assembly_2
CC  name: cctgataag
CC  asmb.seed: ctgata
CC  matrix.nb: 2
CC  sites: 4
CC  consensus.strict: --CCTGATAAG--
CC  consensus.strict.rc: --CTTATCAGG--
CC  consensus.IUPAC: nnCCTGATAAGnn
CC  consensus.IUPAC.rc: NNCTTATCAGGNN
CC  consensus.regexp: [acgt][acgt]CCTGATAAG[acgt][acgt]
CC  consensus.regexp.rc: [ACGT][ACGT]CTTATCAGG[ACGT][ACGT]
XX
//
AC  assembly_3
XX
ID  ctgggtgacagt
XX
DE  nnCTGGGTGACAGTnn
P0           a         c         g         t
1         0.00      0.00      0.00      0.00
2         0.00      0.00      0.00      0.00
3         0.00      4.23      0.00      0.00
4         0.00      0.00      0.00     12.96
5         0.00      0.00     12.96      0.00
6         0.00      0.00     29.36      0.00
7         0.00      0.00     35.83      0.00
8         0.00      0.00      0.00     35.83
9         0.00      0.00     35.83      0.00
10       35.83      0.00      0.00      0.00
11        0.00     35.83      0.00      0.00
12       35.83      0.00      0.00      0.00
13        0.00      0.00     22.24      0.00
14        0.00      0.00      0.00     22.10
15        0.00      0.00      0.00      0.00
16        0.00      0.00      0.00      0.00
XX
CC  program: pattern-assembly
CC  matrix.nb: 3
CC  id: assembly_3
CC  name: ctgggtgacagt
CC  asmb.seed: gtgaca
CC  matrix.nb: 3
CC  sites: 7
CC  consensus.strict: --CTGGGTGACAGT--
CC  consensus.strict.rc: --ACTGTCACCCAG--
CC  consensus.IUPAC: nnCTGGGTGACAGTnn
CC  consensus.IUPAC.rc: NNACTGTCACCCAGNN
CC  consensus.regexp: [acgt][acgt]CTGGGTGACAGT[acgt][acgt]
CC  consensus.regexp.rc: [ACGT][ACGT]ACTGTCACCCAG[ACGT][ACGT]
XX
//
AC  assembly_4
XX
ID  tcagagatagg
XX
DE  nnTCAGAGATAGGnn
P0           a         c         g         t
1         0.00      0.00      0.00      0.00
2         0.00      0.00      0.00      0.00
3         0.00      0.00      0.00      7.30
4         0.00      7.30      0.00      0.00
5         9.59      0.00      0.00      0.00
6         0.00      0.00     40.18      0.00
7        40.18      0.00      0.00      0.00
8         0.00      0.00     40.18      0.00
9        40.18      0.00      0.00      0.00
10        0.00      0.00      0.00     40.18
11       40.18      0.00      0.00      0.00
12        0.00      0.00     29.25      0.00
13        0.00      0.00     19.39      0.00
14        0.00      0.00      0.00      0.00
15        0.00      0.00      0.00      0.00
XX
CC  program: pattern-assembly
CC  matrix.nb: 4
CC  id: assembly_4
CC  name: tcagagatagg
CC  asmb.seed: agatag
CC  matrix.nb: 4
CC  sites: 6
CC  consensus.strict: --TCAGAGATAGG--
CC  consensus.strict.rc: --CCTATCTCTGA--
CC  consensus.IUPAC: nnTCAGAGATAGGnn
CC  consensus.IUPAC.rc: NNCCTATCTCTGANN
CC  consensus.regexp: [acgt][acgt]TCAGAGATAGG[acgt][acgt]
CC  consensus.regexp.rc: [ACGT][ACGT]CCTATCTCTGA[ACGT][ACGT]
XX
//
AC  assembly_5
XX
ID  actgtcctgtcacccag
XX
DE  nnACTGTCCTGTCACCCAGnn
P0           a         c         g         t
1         0.00      0.00      0.00      0.00
2         0.00      0.00      0.00      0.00
3        22.10      0.00      0.00      0.00
4         0.00     25.87      0.00      0.00
5         0.00      0.00      0.00     25.87
6         0.00      0.00     25.87      0.00
7         0.00      0.00      0.00     25.87
8         0.00     25.87      0.00      0.00
9         0.00     25.87      0.00      0.00
10        0.00      0.00      0.00     35.83
11        0.00      0.00     35.83      0.00
12        0.00      0.00      0.00     35.83
13        0.00     35.83      0.00      0.00
14       35.83      0.00      0.00      0.00
15        0.00     35.83      0.00      0.00
16        0.00     29.36      0.00      0.00
17        0.00     12.96      0.00      0.00
18       12.96      0.00      0.00      0.00
19        0.00      0.00      4.23      0.00
20        0.00      0.00      0.00      0.00
21        0.00      0.00      0.00      0.00
XX
CC  program: pattern-assembly
CC  matrix.nb: 5
CC  id: assembly_5
CC  name: actgtcctgtcacccag
CC  asmb.seed: ctgtcc
CC  matrix.nb: 5
CC  sites: 12
CC  consensus.strict: --ACTGTCCTGTCACCCAG--
CC  consensus.strict.rc: --CTGGGTGACAGGACAGT--
CC  consensus.IUPAC: nnACTGTCCTGTCACCCAGnn
CC  consensus.IUPAC.rc: NNCTGGGTGACAGGACAGTNN
CC  consensus.regexp: [acgt][acgt]ACTGTCCTGTCACCCAG[acgt][acgt]
CC  consensus.regexp.rc: [ACGT][ACGT]CTGGGTGACAGGACAGT[ACGT][ACGT]
XX
//
