AC  assembly_1
XX
ID  agagataagg
XX
DE  nnAGAGATAAGGnn
P0           a         c         g         t
1         0.00      0.00      0.00      0.00
2         0.00      0.00      0.00      0.00
3        21.78      0.00      0.00      0.00
4         0.00      0.00     30.18      0.00
5        65.50      0.00      0.00      0.00
6         0.00      0.00     65.50      0.00
7        65.50      0.00      0.00      0.00
8         0.00      0.00      0.00     65.50
9        65.50      0.00      0.00      0.00
10       65.50      0.00      0.00      0.00
11        0.00      0.00     65.50      0.00
12        0.00      0.00     47.72      0.00
13        0.00      0.00      0.00      0.00
14        0.00      0.00      0.00      0.00
XX
CC  program: pattern-assembly
CC  matrix.nb: 1
CC  id: assembly_1
CC  name: agagataagg
CC  asmb.seed: agataag
CC  matrix.nb: 1
CC  sites: 4
CC  consensus.strict: --AGAGATAAGG--
CC  consensus.strict.rc: --CCTTATCTCT--
CC  consensus.IUPAC: nnAGAGATAAGGnn
CC  consensus.IUPAC.rc: NNCCTTATCTCTNN
CC  consensus.regexp: [acgt][acgt]AGAGATAAGG[acgt][acgt]
CC  consensus.regexp.rc: [ACGT][ACGT]CCTTATCTCT[ACGT][ACGT]
XX
//
AC  assembly_2
XX
ID  ccttatcagt
XX
DE  nnCCTTATCAGTnn
P0           a         c         g         t
1         0.00      0.00      0.00      0.00
2         0.00      0.00      0.00      0.00
3         0.00     47.72      0.00      0.00
4         0.00     47.72      0.00      0.00
5         0.00      0.00      0.00     47.72
6         0.00      0.00      0.00     47.72
7        47.72      0.00      0.00      0.00
8         0.00      0.00      0.00     47.72
9         0.00     47.72      0.00      0.00
10       31.47      0.00      0.00      0.00
11        0.00      0.00     31.33      0.00
12        0.00      0.00      0.00     13.49
13        0.00      0.00      0.00      0.00
14        0.00      0.00      0.00      0.00
XX
CC  program: pattern-assembly
CC  matrix.nb: 2
CC  id: assembly_2
CC  name: ccttatcagt
CC  asmb.seed: cttatca
CC  matrix.nb: 2
CC  sites: 4
CC  consensus.strict: --CCTTATCAGT--
CC  consensus.strict.rc: --ACTGATAAGG--
CC  consensus.IUPAC: nnCCTTATCAGTnn
CC  consensus.IUPAC.rc: NNACTGATAAGGNN
CC  consensus.regexp: [acgt][acgt]CCTTATCAGT[acgt][acgt]
CC  consensus.regexp.rc: [ACGT][ACGT]ACTGATAAGG[ACGT][ACGT]
XX
//
AC  assembly_3
XX
ID  aactgtcacca
XX
DE  nnAACTGTCACCAnn
P0           a         c         g         t
1         0.00      0.00      0.00      0.00
2         0.00      0.00      0.00      0.00
3         6.36      0.00      0.00      0.00
4         8.91      0.00      0.00      0.00
5         0.00     27.78      0.00      0.00
6         0.00      0.00      0.00     27.78
7         0.00      0.00     27.78      0.00
8         0.00      0.00      0.00     27.78
9         0.00     27.78      0.00      0.00
10       27.78      0.00      0.00      0.00
11        0.00     27.78      0.00      0.00
12        0.00     18.34      0.00      0.00
13       12.48      0.00      0.00      0.00
14        0.00      0.00      0.00      0.00
15        0.00      0.00      0.00      0.00
XX
CC  program: pattern-assembly
CC  matrix.nb: 3
CC  id: assembly_3
CC  name: aactgtcacca
CC  asmb.seed: ctgtcac
CC  matrix.nb: 3
CC  sites: 5
CC  consensus.strict: --AACTGTCACCA--
CC  consensus.strict.rc: --TGGTGACAGTT--
CC  consensus.IUPAC: nnAACTGTCACCAnn
CC  consensus.IUPAC.rc: NNTGGTGACAGTTNN
CC  consensus.regexp: [acgt][acgt]AACTGTCACCA[acgt][acgt]
CC  consensus.regexp.rc: [ACGT][ACGT]TGGTGACAGTT[ACGT][ACGT]
XX
//
AC  assembly_4
XX
ID  agggacagataagg
XX
DE  nnAGGGACAGATAAGGnn
P0           a         c         g         t
1         0.00      0.00      0.00      0.00
2         0.00      0.00      0.00      0.00
3         5.75      0.00      0.00      0.00
4         0.00      0.00     12.00      0.00
5         0.00      0.00     12.00      0.00
6         0.00      0.00     12.00      0.00
7        12.00      0.00      0.00      0.00
8         0.00     23.43      0.00      0.00
9        65.50      0.00      0.00      0.00
10        0.00      0.00     65.50      0.00
11       65.50      0.00      0.00      0.00
12        0.00      0.00      0.00     65.50
13       65.50      0.00      0.00      0.00
14       65.50      0.00      0.00      0.00
15        0.00      0.00     65.50      0.00
16        0.00      0.00     47.72      0.00
17        0.00      0.00      0.00      0.00
18        0.00      0.00      0.00      0.00
XX
CC  program: pattern-assembly
CC  matrix.nb: 4
CC  id: assembly_4
CC  name: agggacagataagg
CC  asmb.seed: cagataa
CC  matrix.nb: 4
CC  sites: 8
CC  consensus.strict: --AGGGACAGATAAGG--
CC  consensus.strict.rc: --CCTTATCTGTCCCT--
CC  consensus.IUPAC: nnAGGGACAGATAAGGnn
CC  consensus.IUPAC.rc: NNCCTTATCTGTCCCTNN
CC  consensus.regexp: [acgt][acgt]AGGGACAGATAAGG[acgt][acgt]
CC  consensus.regexp.rc: [ACGT][ACGT]CCTTATCTGTCCCT[ACGT][ACGT]
XX
//
AC  assembly_5
XX
ID  agagataaga
XX
DE  nnAGAGATAAGAnn
P0           a         c         g         t
1         0.00      0.00      0.00      0.00
2         0.00      0.00      0.00      0.00
3        21.78      0.00      0.00      0.00
4         0.00      0.00     30.18      0.00
5        65.50      0.00      0.00      0.00
6         0.00      0.00     65.50      0.00
7        65.50      0.00      0.00      0.00
8         0.00      0.00      0.00     65.50
9        65.50      0.00      0.00      0.00
10       65.50      0.00      0.00      0.00
11        0.00      0.00     65.50      0.00
12       20.91      0.00      0.00      0.00
13        0.00      0.00      0.00      0.00
14        0.00      0.00      0.00      0.00
XX
CC  program: pattern-assembly
CC  matrix.nb: 5
CC  id: assembly_5
CC  name: agagataaga
CC  asmb.seed: gataaga
CC  matrix.nb: 5
CC  sites: 4
CC  consensus.strict: --AGAGATAAGA--
CC  consensus.strict.rc: --TCTTATCTCT--
CC  consensus.IUPAC: nnAGAGATAAGAnn
CC  consensus.IUPAC.rc: NNTCTTATCTCTNN
CC  consensus.regexp: [acgt][acgt]AGAGATAAGA[acgt][acgt]
CC  consensus.regexp.rc: [ACGT][ACGT]TCTTATCTCT[ACGT][ACGT]
XX
//
