/var/www/html/rsat/public_html/tmp/www-data/2025/01/17/peak-motifs.2025-01-17.065355_2025-01-17.065355_fLm9Z5/results/discovered_motifs/peak-motifs_motifs_disco_compa.tab 
 compare-matrices  -v 1 -format transfac -file $RSAT/public_html/tmp/www-data/2025/01/17/peak-motifs.2025-01-17.065355_2025-01-17.065355_fLm9Z5/results/discovered_motifs/peak-motifs_motifs_discovered.tf -distinct -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2025/01/17/peak-motifs.2025-01-17.065355_2025-01-17.065355_fLm9Z5/results/discovered_motifs/peak-motifs_motifs_disco_compa.tab
 Program version       	1.118
 Quick mode 
 Input files
	file1 	$RSAT/public_html/tmp/www-data/2025/01/17/peak-motifs.2025-01-17.065355_2025-01-17.065355_fLm9Z5/results/discovered_motifs/peak-motifs_motifs_discovered.tf
	file2 	$RSAT/public_html/tmp/www-data/2025/01/17/peak-motifs.2025-01-17.065355_2025-01-17.065355_fLm9Z5/results/discovered_motifs/peak-motifs_motifs_discovered.tf
 Output files
	match_table_txt	$RSAT/public_html/tmp/www-data/2025/01/17/peak-motifs.2025-01-17.065355_2025-01-17.065355_fLm9Z5/results/discovered_motifs/peak-motifs_motifs_disco_compa.tab
	match_table_html	$RSAT/public_html/tmp/www-data/2025/01/17/peak-motifs.2025-01-17.065355_2025-01-17.065355_fLm9Z5/results/discovered_motifs/peak-motifs_motifs_disco_compa.html
	prefix       	$RSAT/public_html/tmp/www-data/2025/01/17/peak-motifs.2025-01-17.065355_2025-01-17.065355_fLm9Z5/results/discovered_motifs/peak-motifs_motifs_disco_compa
	alignments_1ton_html	$RSAT/public_html/tmp/www-data/2025/01/17/peak-motifs.2025-01-17.065355_2025-01-17.065355_fLm9Z5/results/discovered_motifs/peak-motifs_motifs_disco_compa_alignments_1ton.html
	html_index   	$RSAT/public_html/tmp/www-data/2025/01/17/peak-motifs.2025-01-17.065355_2025-01-17.065355_fLm9Z5/results/discovered_motifs/peak-motifs_motifs_disco_compa_index.html
	alignments_1ton	$RSAT/public_html/tmp/www-data/2025/01/17/peak-motifs.2025-01-17.065355_2025-01-17.065355_fLm9Z5/results/discovered_motifs/peak-motifs_motifs_disco_compa_alignments_1ton.tab
 Matrices
	file1	10 matrices	$RSAT/public_html/tmp/www-data/2025/01/17/peak-motifs.2025-01-17.065355_2025-01-17.065355_fLm9Z5/results/discovered_motifs/peak-motifs_motifs_discovered.tf
		file1	1	15	958
		file1	2	13	877
		file1	3	16	479
		file1	4	15	725
		file1	5	21	119
		file1	6	14	808
		file1	7	14	650
		file1	8	15	571
		file1	9	18	521
		file1	10	14	972
	file2	10 matrices	$RSAT/public_html/tmp/www-data/2025/01/17/peak-motifs.2025-01-17.065355_2025-01-17.065355_fLm9Z5/results/discovered_motifs/peak-motifs_motifs_discovered.tf
		file2		1		15		958
		file2		2		13		877
		file2		3		16		479
		file2		4		15		725
		file2		5		21		119
		file2		6		14		808
		file2		7		14		650
		file2		8		15		571
		file2		9		18		521
		file2		10		14		972
 Column content
	1	id1          	Identifier of the first matrix
	2	id2          	Identifier of the second matrix
	3	name1        	Name of the first matrix
	4	name2        	Name of the second matrix
	5	cor          	Pearson coefficient of correlation between frequency matrices
	6	Ncor         	Normalized correlation. Ncor = cor * Wr
	7	w1           	Width of the first matrix
	8	w2           	Width of the second matrix
	9	w            	Alignment length (number of overlapping columns between matrix 1 and matrix 2, as a function of the offset)
	10	W            	Total alignment length (overlapping + non-overlapping columns). W = w1 + w2 - w
	11	Wr           	Relative alignment length (overlap divided by the total alignemnt length). Wr = w/W
	12	wr1          	Alignment length relative to the width of the first matrix. wr1 = w/w1
	13	wr2          	Alignment length relative to the width of the second matrix. wr2 = w/w2
	14	strand       	"strand", i.e. orientation of matrix 2 relative to matrix 1 (D=direct;  R=reverse)
	15	offset       	shift of the second matrix relative to the first matrix (negative:left; positive: right)
id1 id2 name1 name2 cor Ncor w1 w2 w W Wr wr1 wr2 strand offset
oligos_7nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m1 1.000 1.000 14 14 14 14 1.0000 1.0000 1.0000 D 0
oligos_6nt_test_vs_ctrl_m4 oligos_6nt_test_vs_ctrl_m4 oligos_6nt_test_vs_ctrl_m4 oligos_6nt_test_vs_ctrl_m4 1.000 1.000 15 15 15 15 1.0000 1.0000 1.0000 D 0
oligos_6nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m2 1.000 1.000 13 13 13 13 1.0000 1.0000 1.0000 D 0
oligos_7nt_test_vs_ctrl_m5 oligos_7nt_test_vs_ctrl_m5 oligos_7nt_test_vs_ctrl_m5 oligos_7nt_test_vs_ctrl_m5 1.000 1.000 14 14 14 14 1.0000 1.0000 1.0000 D 0
oligos_7nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m2 1.000 1.000 14 14 14 14 1.0000 1.0000 1.0000 D 0
oligos_6nt_test_vs_ctrl_m3 oligos_6nt_test_vs_ctrl_m3 oligos_6nt_test_vs_ctrl_m3 oligos_6nt_test_vs_ctrl_m3 1.000 1.000 16 16 16 16 1.0000 1.0000 1.0000 D 0
oligos_7nt_test_vs_ctrl_m4 oligos_7nt_test_vs_ctrl_m4 oligos_7nt_test_vs_ctrl_m4 oligos_7nt_test_vs_ctrl_m4 1.000 1.000 18 18 18 18 1.0000 1.0000 1.0000 D 0
oligos_7nt_test_vs_ctrl_m3 oligos_7nt_test_vs_ctrl_m3 oligos_7nt_test_vs_ctrl_m3 oligos_7nt_test_vs_ctrl_m3 1.000 1.000 15 15 15 15 1.0000 1.0000 1.0000 D 0
oligos_6nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m1 1.000 1.000 15 15 15 15 1.0000 1.0000 1.0000 D 0
oligos_6nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m5 1.000 1.000 21 21 21 21 1.0000 1.0000 1.0000 D 0
oligos_7nt_test_vs_ctrl_m5 oligos_7nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m5 oligos_7nt_test_vs_ctrl_m1 0.922 0.922 14 14 14 14 1.0000 1.0000 1.0000 D 0
oligos_7nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m5 oligos_7nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m5 0.922 0.922 14 14 14 14 1.0000 1.0000 1.0000 D 0
oligos_7nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m2 0.931 0.864 14 13 13 14 0.9286 0.9286 1.0000 R 1
oligos_6nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m2 0.931 0.864 13 14 13 14 0.9286 1.0000 0.9286 R 0
oligos_6nt_test_vs_ctrl_m4 oligos_6nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m4 oligos_6nt_test_vs_ctrl_m1 0.854 0.854 15 15 15 15 1.0000 1.0000 1.0000 R 0
oligos_6nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m4 oligos_6nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m4 0.854 0.854 15 15 15 15 1.0000 1.0000 1.0000 R 0
oligos_7nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m2 0.793 0.793 14 14 14 14 1.0000 1.0000 1.0000 R 0
oligos_7nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m1 0.793 0.793 14 14 14 14 1.0000 1.0000 1.0000 R 0
oligos_6nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m5 0.964 0.783 15 14 13 16 0.8125 0.8667 0.9286 R -1
oligos_7nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m1 0.964 0.783 14 15 13 16 0.8125 0.9286 0.8667 R -2
oligos_7nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m1 0.953 0.775 14 15 13 16 0.8125 0.9286 0.8667 R -2
oligos_6nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m1 0.953 0.775 15 14 13 16 0.8125 0.8667 0.9286 R -1
oligos_7nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m4 oligos_7nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m4 0.920 0.715 14 18 14 18 0.7778 1.0000 0.7778 D -4
oligos_7nt_test_vs_ctrl_m4 oligos_7nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m4 oligos_7nt_test_vs_ctrl_m1 0.920 0.715 18 14 14 18 0.7778 0.7778 1.0000 D 4
oligos_6nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m4 oligos_6nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m4 0.853 0.711 15 18 15 18 0.8333 1.0000 0.8333 R -1
oligos_7nt_test_vs_ctrl_m4 oligos_6nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m4 oligos_6nt_test_vs_ctrl_m1 0.853 0.711 18 15 15 18 0.8333 0.8333 1.0000 R 2
oligos_6nt_test_vs_ctrl_m3 oligos_7nt_test_vs_ctrl_m3 oligos_6nt_test_vs_ctrl_m3 oligos_7nt_test_vs_ctrl_m3 0.846 0.697 16 15 14 17 0.8235 0.8750 0.9333 R 2
oligos_7nt_test_vs_ctrl_m3 oligos_6nt_test_vs_ctrl_m3 oligos_7nt_test_vs_ctrl_m3 oligos_6nt_test_vs_ctrl_m3 0.846 0.697 15 16 14 17 0.8235 0.9333 0.8750 R 1
oligos_6nt_test_vs_ctrl_m4 oligos_7nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m4 oligos_7nt_test_vs_ctrl_m5 0.820 0.666 15 14 13 16 0.8125 0.8667 0.9286 D 2
oligos_7nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m4 oligos_7nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m4 0.820 0.666 14 15 13 16 0.8125 0.9286 0.8667 D -2
oligos_7nt_test_vs_ctrl_m4 oligos_7nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m4 oligos_7nt_test_vs_ctrl_m2 0.856 0.666 18 14 14 18 0.7778 0.7778 1.0000 R 4
oligos_7nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m4 oligos_7nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m4 0.856 0.666 14 18 14 18 0.7778 1.0000 0.7778 R 0
oligos_7nt_test_vs_ctrl_m5 oligos_7nt_test_vs_ctrl_m4 oligos_7nt_test_vs_ctrl_m5 oligos_7nt_test_vs_ctrl_m4 0.841 0.654 14 18 14 18 0.7778 1.0000 0.7778 D -4
oligos_7nt_test_vs_ctrl_m4 oligos_7nt_test_vs_ctrl_m5 oligos_7nt_test_vs_ctrl_m4 oligos_7nt_test_vs_ctrl_m5 0.841 0.654 18 14 14 18 0.7778 0.7778 1.0000 D 4
oligos_6nt_test_vs_ctrl_m4 oligos_7nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m4 oligos_7nt_test_vs_ctrl_m1 0.805 0.654 15 14 13 16 0.8125 0.8667 0.9286 D 2
oligos_7nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m4 oligos_7nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m4 0.805 0.654 14 15 13 16 0.8125 0.9286 0.8667 D -2
oligos_6nt_test_vs_ctrl_m3 oligos_6nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m3 oligos_6nt_test_vs_ctrl_m5 0.839 0.639 16 21 16 21 0.7619 1.0000 0.7619 R 0
oligos_6nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m3 oligos_6nt_test_vs_ctrl_m5 oligos_6nt_test_vs_ctrl_m3 0.839 0.639 21 16 16 21 0.7619 0.7619 1.0000 R 5
oligos_6nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m2 0.736 0.638 15 13 13 15 0.8667 0.8667 1.0000 R 0
oligos_6nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m1 oligos_6nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m1 0.736 0.638 13 15 13 15 0.8667 1.0000 0.8667 R -2
oligos_7nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m1 0.748 0.608 14 15 13 16 0.8125 0.9286 0.8667 D 1
oligos_6nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m2 oligos_6nt_test_vs_ctrl_m1 oligos_7nt_test_vs_ctrl_m2 0.748 0.608 15 14 13 16 0.8125 0.8667 0.9286 D -1
oligos_6nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m4 oligos_6nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m4 0.780 0.563 13 18 13 18 0.7222 1.0000 0.7222 D -4
oligos_7nt_test_vs_ctrl_m4 oligos_6nt_test_vs_ctrl_m2 oligos_7nt_test_vs_ctrl_m4 oligos_6nt_test_vs_ctrl_m2 0.780 0.563 18 13 13 18 0.7222 0.7222 1.0000 D 4 
 Host name	rsat
 Job started	2025-01-17.065444
 Job done	2025-01-17.065454
 Seconds	0.66
	user	0.66
	system	0.34
	cuser	7.19
;	csystem	1.2