; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2025/01/29/oligo-analysis_2025-01-29.082437_2euV5c_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/01/29/oligo-analysis_2025-01-29.082437_2euV5c_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/01/29/oligo-analysis_2025-01-29.082437_2euV5c_pssm_count_matrices_links.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2025/01/29/oligo-analysis_2025-01-29.082437_2euV5c_pssm_count_matrices.tf
; Input format tf
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2025/01/29/oligo-analysis_2025-01-29.082437_2euV5c_pssm_count_matrices_links.txt
; Output format tab
; pseudo-weight 1
a 9 4 5 10 13 0 14 3 14 0 11 2 8 3
c 2 2 1 1 0 0 0 0 0 0 0 0 1 2
g 0 7 8 1 0 14 0 10 0 14 1 9 4 5
t 3 1 0 2 1 0 0 1 0 0 2 3 1 4
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/01/29//oligo-analysis_2025-01-29.082437_2euV5c_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/01/29//oligo-analysis_2025-01-29.082437_2euV5c_pssm_count_matrices_logo_m1_rc.png
;
a 3 2 2 0 0 10 0 0 9 2 3 5
c 1 1 6 0 0 0 0 10 1 0 4 1
g 1 4 0 1 10 0 0 0 0 6 1 1
t 5 3 2 9 0 0 10 0 0 2 2 3
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/01/29//oligo-analysis_2025-01-29.082437_2euV5c_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/01/29//oligo-analysis_2025-01-29.082437_2euV5c_pssm_count_matrices_logo_m2_rc.png
;
a 0 1 0 0 0 0 0 0 4 0 1 0 1 0
c 2 1 0 4 0 0 0 4 0 0 3 4 1 1
g 0 0 0 0 0 4 0 0 0 4 0 0 1 0
t 2 2 4 0 4 0 4 0 0 0 0 0 1 3
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/01/29//oligo-analysis_2025-01-29.082437_2euV5c_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/01/29//oligo-analysis_2025-01-29.082437_2euV5c_pssm_count_matrices_logo_m3_rc.png
;
a 3 1 4 0 0 0 4 0 0 4 0 3 0
c 0 0 0 0 0 0 0 0 4 0 4 0 4
g 1 3 0 4 0 4 0 4 0 0 0 1 0
t 0 0 0 0 4 0 0 0 0 0 0 0 0
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/01/29//oligo-analysis_2025-01-29.082437_2euV5c_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/01/29//oligo-analysis_2025-01-29.082437_2euV5c_pssm_count_matrices_logo_m4_rc.png
;
a 2 2 0 7 0 0 0 0 1 1
c 0 3 7 0 0 7 0 7 3 3
g 2 1 0 0 0 0 0 0 1 0
t 3 1 0 0 7 0 7 0 2 3
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/01/29//oligo-analysis_2025-01-29.082437_2euV5c_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/01/29//oligo-analysis_2025-01-29.082437_2euV5c_pssm_count_matrices_logo_m5_rc.png
;
a 2 4 0 5 7 0 1 0 7 0 2 1
c 1 0 0 1 0 0 6 0 0 1 1 1
g 3 0 7 0 0 7 0 0 0 5 3 1
t 1 3 0 1 0 0 0 7 0 1 1 4
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/01/29//oligo-analysis_2025-01-29.082437_2euV5c_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/01/29//oligo-analysis_2025-01-29.082437_2euV5c_pssm_count_matrices_logo_m6_rc.png
;
a 5 5 18 18 1 0 20 19 1 2 12 12
c 2 2 0 0 0 0 0 0 1 0 1 1
g 1 1 0 1 0 0 0 0 0 0 2 2
t 12 12 2 1 19 20 0 1 18 18 5 5
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/01/29//oligo-analysis_2025-01-29.082437_2euV5c_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/01/29//oligo-analysis_2025-01-29.082437_2euV5c_pssm_count_matrices_logo_m7_rc.png
;
a 2 5 0 7 7 7 0 7 2 3
c 1 1 0 0 0 0 0 0 0 0
g 2 1 7 0 0 0 7 0 3 2
t 2 0 0 0 0 0 0 0 2 2
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/01/29//oligo-analysis_2025-01-29.082437_2euV5c_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/01/29//oligo-analysis_2025-01-29.082437_2euV5c_pssm_count_matrices_logo_m8_rc.png
;
; Host name rsat
; Job started 2025-01-29.082443
; Job done 2025-01-29.082445
; Seconds 0.14
; user 0.14
; system 0.1
; cuser 1.94
; csystem 0.32