; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/02/07/oligo-analysis_2025-02-07.060931_vz1VTQ_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/02/07/oligo-analysis_2025-02-07.060931_vz1VTQ_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/02/07/oligo-analysis_2025-02-07.060931_vz1VTQ_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/02/07/oligo-analysis_2025-02-07.060931_vz1VTQ_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/02/07/oligo-analysis_2025-02-07.060931_vz1VTQ_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	1	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	2	0	0	0	0	2	0	1	1	1	1	1	1	0	0	2	0
c	1	0	0	2	0	0	2	0	0	2	0	0	0	2	2	0	0	0	0	0	2	0	1	0	1	0	1	0	1	1	0	0	0
g	0	0	0	0	0	0	0	2	2	0	0	2	0	0	0	0	0	2	2	2	0	0	1	1	0	0	0	0	0	0	1	0	2
t	0	1	2	0	2	2	0	0	0	0	0	0	2	0	0	2	0	0	0	0	0	0	0	0	0	1	0	1	0	1	1	0	0
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.060931_vz1VTQ_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.060931_vz1VTQ_pssm_count_matrices_logo_m1_rc.png
;
a	1	1	0	0	0	2	0	0	2	2	1	1
c	0	0	2	2	0	0	2	0	0	0	1	0
g	0	1	0	0	0	0	0	2	0	0	0	1
t	1	0	0	0	2	0	0	0	0	0	0	0
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.060931_vz1VTQ_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.060931_vz1VTQ_pssm_count_matrices_logo_m2_rc.png
;
a	1	0	0	0	0	0	2	2	0	0	1	0
c	0	1	2	2	0	0	0	0	0	2	1	1
g	0	0	0	0	0	2	0	0	2	0	0	0
t	1	1	0	0	2	0	0	0	0	0	0	1
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.060931_vz1VTQ_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.060931_vz1VTQ_pssm_count_matrices_logo_m3_rc.png
;
a	0	0	0	0	0	2	0	2	2	2	1	1
c	1	0	2	0	2	0	0	0	0	0	0	0
g	0	1	0	0	0	0	0	0	0	0	0	0
t	1	1	0	2	0	0	2	0	0	0	1	1
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.060931_vz1VTQ_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.060931_vz1VTQ_pssm_count_matrices_logo_m4_rc.png
;
a	0	0	3	3	1	0	0	3	0	0	0	2
c	2	0	0	0	0	0	0	0	0	3	1	0
g	1	1	0	0	0	0	0	0	3	0	1	0
t	0	2	0	0	2	3	3	0	0	0	1	1
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.060931_vz1VTQ_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.060931_vz1VTQ_pssm_count_matrices_logo_m5_rc.png
;
a	1	1	2	0	0	2	0	0	0	0	1	1
c	1	0	0	2	0	0	0	0	0	2	0	1
g	0	0	0	0	0	0	0	0	0	0	0	0
t	0	1	0	0	2	0	2	2	2	0	1	0
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.060931_vz1VTQ_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.060931_vz1VTQ_pssm_count_matrices_logo_m6_rc.png
;
a	1	0	1	0	0	0	0	1	0	0	1	1	1
c	0	0	0	1	0	1	1	0	1	1	0	0	0
g	0	0	0	0	1	0	0	0	0	0	0	0	0
t	0	1	0	0	0	0	0	0	0	0	0	0	0
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.060931_vz1VTQ_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.060931_vz1VTQ_pssm_count_matrices_logo_m7_rc.png
;
a	1	1	0	1	0	0	1	0	0	1	1	0
c	0	0	0	0	0	0	0	1	1	0	0	0
g	0	0	1	0	0	0	0	0	0	0	0	0
t	0	0	0	0	1	1	0	0	0	0	0	1
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.060931_vz1VTQ_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.060931_vz1VTQ_pssm_count_matrices_logo_m8_rc.png
;
a	1	1	0	0	0	0	0	0	0	1	1
c	0	0	0	2	2	2	0	2	2	0	1
g	0	0	2	0	0	0	2	0	0	0	0
t	1	1	0	0	0	0	0	0	0	1	0
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.060931_vz1VTQ_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.060931_vz1VTQ_pssm_count_matrices_logo_m9_rc.png
;
; Host name	rsat
; Job started	2025-02-07.060937
; Job done	2025-02-07.060939
; Seconds	0.15
;	user	0.15
;	system	0.08
;	cuser	2.03
;	csystem	0.4