; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2025/02/07/oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/02/07/oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/02/07/oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_links.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2025/02/07/oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices.tf
; Input format tf
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2025/02/07/oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_links.txt
; Output format tab
; pseudo-weight 1
a 29 27 14 21 65 7 9 93 2 3 1 79 22 17 18
c 19 32 58 7 12 82 2 1 92 89 1 6 52 27 25
g 18 16 12 10 10 6 0 2 3 5 1 8 15 20 13
t 34 25 16 62 13 5 89 4 3 3 97 7 11 36 44
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m1_rc.png
;
a 265 418 726 67 743 728 57 745 722 86 457 417
c 94 103 16 20 21 15 15 29 7 15 105 108
g 381 227 45 709 31 37 728 26 52 691 159 198
t 65 57 18 9 10 25 5 5 24 13 84 82
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m2_rc.png
;
a 724 664 914 955 855 985 1008 466 1035 1002 512 988 966 870 926 688 573
c 82 98 52 31 30 30 13 27 15 23 36 41 40 35 44 98 116
g 236 300 132 112 229 100 84 606 65 78 560 87 100 201 118 246 312
t 86 66 30 30 14 13 23 29 13 25 20 12 22 22 40 96 127
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m3_rc.png
;
a 71 84 60 11 13 286 7 2 258 19 55 106 74
c 89 95 46 263 295 9 11 289 11 258 163 71 90
g 61 55 33 21 4 6 8 19 16 6 48 51 61
t 94 81 176 20 3 14 289 5 30 32 49 87 90
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m4_rc.png
;
a 37 38 16 7 2 10 4 1 8 9 20 41
c 50 62 163 5 187 11 7 195 19 7 84 40
g 55 41 17 0 1 165 6 2 156 2 45 57
t 59 60 5 189 11 15 184 3 18 183 52 63
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m5_rc.png
;
a 55 45 19 26 21 8 148 16 4 147 16 4 37 111 41 43
c 28 22 23 11 12 13 6 14 5 11 7 2 20 14 26 30
g 52 44 112 126 12 152 14 8 163 13 10 160 100 25 58 59
t 42 66 23 14 132 4 9 139 5 6 144 11 20 27 52 45
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m6_rc.png
;
a 44 49 31 24 17 30 14 14 114 13 15 106 15 12 35 58 44
c 18 24 7 2 6 10 3 3 4 9 1 8 7 5 8 21 20
g 77 71 117 134 129 111 142 136 40 134 142 37 129 138 109 62 66
t 22 17 6 1 9 10 2 8 3 5 3 10 10 6 9 20 31
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m7_rc.png
;
a 86 69 29 30 5 19 10 9 18 20 9 33 77 56
c 170 312 464 24 598 69 31 590 97 49 555 426 176 314
g 90 76 20 19 13 22 26 23 18 20 35 23 79 86
t 336 225 169 609 66 572 615 60 549 593 83 200 350 226
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m8_rc.png
;
a 86 98 63 19 249 11 18 246 14 9 239 69 68
c 69 55 61 232 4 14 240 6 7 250 9 48 91
g 66 67 104 15 6 234 10 5 234 8 4 96 64
t 51 52 44 6 13 13 4 15 17 5 20 59 49
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m9_rc.png
;
a 32 114 0 218 0 218 0 218 28 123
c 31 32 0 0 0 0 0 0 44 32
g 32 44 0 0 0 0 0 0 32 31
t 123 28 218 0 218 0 218 0 114 32
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m10.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m10_rc.png
;
a 34 31 0 112 0 0 0 0 44 34
c 27 34 0 0 112 0 0 112 17 18
g 27 17 112 0 0 112 112 0 31 27
t 24 30 0 0 0 0 0 0 20 33
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m11.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m11_rc.png
;
a 99 73 243 243 243 0 243 243 79 96
c 48 69 0 0 0 243 0 0 44 59
g 63 73 0 0 0 0 0 0 75 47
t 33 28 0 0 0 0 0 0 45 41
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m12.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m12_rc.png
;
a 266 130 479 0 479 0 479 0 289 127
c 64 57 0 0 0 0 0 0 50 58
g 107 261 0 479 0 479 0 479 94 241
t 42 31 0 0 0 0 0 0 46 53
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m13.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m13_rc.png
;
a 70 117 156 23 210 27 5 232 25 10 228 91 64
c 24 23 9 9 6 5 1 4 7 5 3 20 25
g 122 71 61 206 14 203 231 1 203 225 6 89 121
t 24 29 14 2 10 5 3 3 5 0 3 40 30
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m14.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m14_rc.png
;
a 120 101 251 251 0 0 251 251 112 106
c 32 49 0 0 0 0 0 0 34 51
g 52 86 0 0 251 251 0 0 70 64
t 47 15 0 0 0 0 0 0 35 30
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m15.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m15_rc.png
;
a 206 175 548 41 440 536 36 16 533 189 189
c 108 138 11 50 57 24 11 15 23 129 95
g 141 154 17 43 78 9 23 553 13 118 182
t 138 126 17 459 18 24 523 9 24 157 127
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m16.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m16_rc.png
;
a 29 18 84 0 0 84 0 0 33 19
c 24 40 0 84 84 0 84 84 15 29
g 10 9 0 0 0 0 0 0 16 18
t 21 17 0 0 0 0 0 0 20 18
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m17.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m17_rc.png
;
a 79 99 32 4 287 7 2 286 11 58 111 77
c 99 65 49 295 11 6 297 2 270 180 64 80
g 58 58 169 2 5 4 5 10 12 40 60 74
t 73 87 59 8 6 292 5 11 16 31 74 78
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m18.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m18_rc.png
;
a 12 21 0 0 0 0 0 0 28 16
c 29 14 82 82 82 0 82 82 15 22
g 14 19 0 0 0 82 0 0 12 18
t 27 28 0 0 0 0 0 0 27 26
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m19.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m19_rc.png
;
a 25 20 0 0 0 0 0 0 22 17
c 27 23 0 93 93 0 93 93 22 28
g 18 23 93 0 0 93 0 0 23 19
t 23 27 0 0 0 0 0 0 26 29
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m20.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/07//oligo-analysis_2025-02-07.165343_yq8p2C_pssm_count_matrices_logo_m20_rc.png
;
; Host name rsat
; Job started 2025-02-07.165359
; Job done 2025-02-07.165405
; Seconds 0.35
; user 0.35
; system 0.19
; cuser 5.01
; csystem 0.87