| id | name | cluster | strand | offset_up | offset_down | width | aligned_consensus | aligned_consensus_rc |
|---|---|---|---|---|---|---|---|---|
| uce_m115_I_715315_715324 | I_715315_715324 | cluster_1 | D | 16 | 10 | 36 | ++++++++++++++++TTTGTTTACA++++++++++ | ++++++++++TGTAAACAAA++++++++++++++++ |
| uce_m559_II_4306192_4306201 | II_4306192_4306201 | cluster_1 | D | 16 | 10 | 36 | ++++++++++++++++TTTGTTTACA++++++++++ | ++++++++++TGTAAACAAA++++++++++++++++ |
| uce_m135_III_2132939_2132945 | III_2132939_2132945 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++TTATATA++++++++++++ | ++++++++++++TATATAA+++++++++++++++++ |
| uce_m249_I_5195200_5195206 | I_5195200_5195206 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++TTATATA++++++++++++ | ++++++++++++TATATAA+++++++++++++++++ |
| uce_m616_I_3417807_3417813 | I_3417807_3417813 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++TTATATA++++++++++++ | ++++++++++++TATATAA+++++++++++++++++ |
| uce_m141_I_4910781_4910790 | I_4910781_4910790 | cluster_1 | D | 14 | 12 | 36 | ++++++++++++++AAGCAGTCAC++++++++++++ | ++++++++++++GTGACTGCTT++++++++++++++ |
| uce_m687_III_1986367_1986376 | III_1986367_1986376 | cluster_1 | D | 14 | 12 | 36 | ++++++++++++++AAGCAGTCAC++++++++++++ | ++++++++++++GTGACTGCTT++++++++++++++ |
| uce_m146_II_1787394_1787401 | II_1787394_1787401 | cluster_1 | D | 16 | 12 | 36 | ++++++++++++++++TTTGTTTA++++++++++++ | ++++++++++++TAAACAAA++++++++++++++++ |
| uce_m158_I_2861868_2861875 | I_2861868_2861875 | cluster_1 | D | 16 | 12 | 36 | ++++++++++++++++TTTGTTTA++++++++++++ | ++++++++++++TAAACAAA++++++++++++++++ |
| uce_m14_II_2516373_2516383 | II_2516373_2516383 | cluster_1 | D | 18 | 7 | 36 | ++++++++++++++++++AGGGTAGGGTT+++++++ | +++++++AACCCTACCCT++++++++++++++++++ |
| uce_m738_I_1298048_1298058 | I_1298048_1298058 | cluster_1 | R | 18 | 7 | 36 | ++++++++++++++++++AGGGTAGGGTT+++++++ | +++++++AACCCTACCCT++++++++++++++++++ |
| uce_m155_I_1769811_1769817 | I_1769811_1769817 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++TTTTATT+++++++++++++ | +++++++++++++AATAAAA++++++++++++++++ |
| uce_m725_I_3892601_3892607 | I_3892601_3892607 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++TTTTATT+++++++++++++ | +++++++++++++AATAAAA++++++++++++++++ |
| uce_m156_I_4939586_4939592 | I_4939586_4939592 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m164_I_2759264_2759270 | I_2759264_2759270 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m191_I_1725248_1725254 | I_1725248_1725254 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m195_II_3375640_3375646 | II_3375640_3375646 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m238_I_4117374_4117380 | I_4117374_4117380 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m251_I_5169222_5169228 | I_5169222_5169228 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m264_II_2449130_2449136 | II_2449130_2449136 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m266_I_3284968_3284974 | I_3284968_3284974 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m279_I_3369892_3369898 | I_3369892_3369898 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m320_I_3622057_3622063 | I_3622057_3622063 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m329_I_2148373_2148379 | I_2148373_2148379 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m361_I_3892041_3892047 | I_3892041_3892047 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m362_I_3892069_3892075 | I_3892069_3892075 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m409_II_570318_570324 | II_570318_570324 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m44_II_2289290_2289296 | II_2289290_2289296 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m465_III_1483927_1483933 | III_1483927_1483933 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m475_III_1260766_1260772 | III_1260766_1260772 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m50_I_3015547_3015553 | I_3015547_3015553 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m532_I_488660_488666 | I_488660_488666 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m533_I_4958140_4958146 | I_4958140_4958146 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m554_III_2143265_2143271 | III_2143265_2143271 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m55_II_2133453_2133459 | II_2133453_2133459 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m580_I_4232436_4232442 | I_4232436_4232442 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m604_III_2029153_2029159 | III_2029153_2029159 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m618_I_3417771_3417777 | I_3417771_3417777 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m646_II_2243287_2243293 | II_2243287_2243293 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m658_II_4223871_4223877 | II_4223871_4223877 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m685_I_3453817_3453823 | I_3453817_3453823 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m701_I_3261405_3261411 | I_3261405_3261411 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m714_III_618524_618530 | III_618524_618530 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m726_I_248568_248574 | I_248568_248574 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m752_II_681540_681546 | II_681540_681546 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m756_II_3720602_3720608 | II_3720602_3720608 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m764_III_546746_546752 | III_546746_546752 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m777_II_3974999_3975005 | II_3974999_3975005 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m779_I_2807385_2807391 | I_2807385_2807391 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m798_I_1109822_1109828 | I_1109822_1109828 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m83_III_95607_95613 | III_95607_95613 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m37_II_4188255_4188262 | II_4188255_4188262 | cluster_1 | D | 16 | 12 | 36 | ++++++++++++++++GCAGTCAC++++++++++++ | ++++++++++++GTGACTGC++++++++++++++++ |
| uce_m161_I_2806059_2806066 | I_2806059_2806066 | cluster_1 | R | 16 | 12 | 36 | ++++++++++++++++GCAGTCAC++++++++++++ | ++++++++++++GTGACTGC++++++++++++++++ |
| uce_m575_I_3422195_3422202 | I_3422195_3422202 | cluster_1 | R | 16 | 12 | 36 | ++++++++++++++++GCAGTCAC++++++++++++ | ++++++++++++GTGACTGC++++++++++++++++ |
| uce_m666_III_406594_406601 | III_406594_406601 | cluster_1 | R | 16 | 12 | 36 | ++++++++++++++++GCAGTCAC++++++++++++ | ++++++++++++GTGACTGC++++++++++++++++ |
| uce_m690_I_4118614_4118621 | I_4118614_4118621 | cluster_1 | R | 16 | 12 | 36 | ++++++++++++++++GCAGTCAC++++++++++++ | ++++++++++++GTGACTGC++++++++++++++++ |
| uce_m28_II_3661004_3661013 | II_3661004_3661013 | cluster_1 | R | 17 | 9 | 36 | +++++++++++++++++TAGGGTAGGG+++++++++ | +++++++++CCCTACCCTA+++++++++++++++++ |
| uce_m167_I_2712884_2712893 | I_2712884_2712893 | cluster_1 | R | 17 | 9 | 36 | +++++++++++++++++TAGGGTAGGG+++++++++ | +++++++++CCCTACCCTA+++++++++++++++++ |
| uce_m353_II_2859390_2859399 | II_2859390_2859399 | cluster_1 | R | 17 | 9 | 36 | +++++++++++++++++TAGGGTAGGG+++++++++ | +++++++++CCCTACCCTA+++++++++++++++++ |
| uce_m649_I_4695017_4695026 | I_4695017_4695026 | cluster_1 | D | 17 | 9 | 36 | +++++++++++++++++TAGGGTAGGG+++++++++ | +++++++++CCCTACCCTA+++++++++++++++++ |
| uce_m174_II_4487500_4487511 | II_4487500_4487511 | cluster_1 | D | 17 | 7 | 36 | +++++++++++++++++AGGGTTAGGGTT+++++++ | +++++++AACCCTAACCCT+++++++++++++++++ |
| uce_m493_III_1459160_1459171 | III_1459160_1459171 | cluster_1 | D | 17 | 7 | 36 | +++++++++++++++++AGGGTTAGGGTT+++++++ | +++++++AACCCTAACCCT+++++++++++++++++ |
| uce_m745_II_1418199_1418210 | II_1418199_1418210 | cluster_1 | D | 17 | 7 | 36 | +++++++++++++++++AGGGTTAGGGTT+++++++ | +++++++AACCCTAACCCT+++++++++++++++++ |
| uce_m187_I_3439102_3439111 | I_3439102_3439111 | cluster_1 | R | 14 | 12 | 36 | ++++++++++++++AARCAGTCAC++++++++++++ | ++++++++++++GTGACTGyTT++++++++++++++ |
| uce_m524_III_804082_804091 | III_804082_804091 | cluster_1 | D | 14 | 12 | 36 | ++++++++++++++AArCAGTCAC++++++++++++ | ++++++++++++GTGACTGYTT++++++++++++++ |
| uce_m189_II_4451909_4451915 | II_4451909_4451915 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m377_II_1566940_1566946 | II_1566940_1566946 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m689_II_2997103_2997109 | II_2997103_2997109 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m212_I_4881823_4881832 | I_4881823_4881832 | cluster_1 | D | 15 | 10 | 36 | +++++++++++++++AGCAGTCACAA++++++++++ | ++++++++++TTGTGACTGCT+++++++++++++++ |
| uce_m699_I_4120812_4120821 | I_4120812_4120821 | cluster_1 | D | 15 | 10 | 36 | +++++++++++++++AGCAGTCACAA++++++++++ | ++++++++++TTGTGACTGCT+++++++++++++++ |
| uce_m243_III_197979_197989 | III_197979_197989 | cluster_1 | D | 17 | 8 | 36 | +++++++++++++++++TAGGGTAGGGT++++++++ | ++++++++ACCCTACCCTA+++++++++++++++++ |
| uce_m339_I_5038553_5038563 | I_5038553_5038563 | cluster_1 | D | 17 | 8 | 36 | +++++++++++++++++TAGGGTAGGGT++++++++ | ++++++++ACCCTACCCTA+++++++++++++++++ |
| uce_m592_II_1501061_1501071 | II_1501061_1501071 | cluster_1 | D | 17 | 8 | 36 | +++++++++++++++++TAGGGTAGGGT++++++++ | ++++++++ACCCTACCCTA+++++++++++++++++ |
| uce_m262_I_4061193_4061204 | I_4061193_4061204 | cluster_1 | D | 12 | 12 | 36 | ++++++++++++AAAAGCAGTCAC++++++++++++ | ++++++++++++GTGACTGCTTTT++++++++++++ |
| uce_m595_I_4329421_4329432 | I_4329421_4329432 | cluster_1 | R | 12 | 12 | 36 | ++++++++++++AAAAGCAGTCAC++++++++++++ | ++++++++++++GTGACTGCTTTT++++++++++++ |
| uce_m49_I_3015528_3015537 | I_3015528_3015537 | cluster_1 | R | 18 | 8 | 36 | ++++++++++++++++++AGGGTAGGGT++++++++ | ++++++++ACCCTACCCT++++++++++++++++++ |
| uce_m268_I_3284977_3284986 | I_3284977_3284986 | cluster_1 | R | 18 | 8 | 36 | ++++++++++++++++++AGGGTAGGGT++++++++ | ++++++++ACCCTACCCT++++++++++++++++++ |
| uce_m60_I_2296811_2296820 | I_2296811_2296820 | cluster_1 | R | 18 | 8 | 36 | ++++++++++++++++++AGGGTAGGGT++++++++ | ++++++++ACCCTACCCT++++++++++++++++++ |
| uce_m79_I_911503_911512 | I_911503_911512 | cluster_1 | R | 18 | 8 | 36 | ++++++++++++++++++AGGGTAGGGT++++++++ | ++++++++ACCCTACCCT++++++++++++++++++ |
| uce_m313_III_662435_662443 | III_662435_662443 | cluster_1 | D | 18 | 9 | 36 | ++++++++++++++++++AGGGTAGGG+++++++++ | +++++++++CCCTACCCT++++++++++++++++++ |
| uce_m579_I_4232452_4232460 | I_4232452_4232460 | cluster_1 | D | 18 | 9 | 36 | ++++++++++++++++++AGGGTAGGG+++++++++ | +++++++++CCCTACCCT++++++++++++++++++ |
| uce_m332_III_1732692_1732699 | III_1732692_1732699 | cluster_1 | D | 17 | 11 | 36 | +++++++++++++++++CAGTCACA+++++++++++ | +++++++++++TGTGACTG+++++++++++++++++ |
| uce_m403_I_3203011_3203018 | I_3203011_3203018 | cluster_1 | D | 17 | 11 | 36 | +++++++++++++++++CAGTCACA+++++++++++ | +++++++++++TGTGACTG+++++++++++++++++ |
| uce_m422_III_1688133_1688140 | III_1688133_1688140 | cluster_1 | D | 17 | 11 | 36 | +++++++++++++++++CAGTCACA+++++++++++ | +++++++++++TGTGACTG+++++++++++++++++ |
| uce_m613_I_1450806_1450813 | I_1450806_1450813 | cluster_1 | R | 17 | 11 | 36 | +++++++++++++++++CAGTCACA+++++++++++ | +++++++++++TGTGACTG+++++++++++++++++ |
| uce_m653_II_2505645_2505652 | II_2505645_2505652 | cluster_1 | D | 17 | 11 | 36 | +++++++++++++++++CAGTCACA+++++++++++ | +++++++++++TGTGACTG+++++++++++++++++ |
| uce_m668_III_488766_488773 | III_488766_488773 | cluster_1 | D | 17 | 11 | 36 | +++++++++++++++++CAGTCACA+++++++++++ | +++++++++++TGTGACTG+++++++++++++++++ |
| uce_m698_III_275448_275455 | III_275448_275455 | cluster_1 | D | 17 | 11 | 36 | +++++++++++++++++CAGTCACA+++++++++++ | +++++++++++TGTGACTG+++++++++++++++++ |
| uce_m740_I_1986641_1986648 | I_1986641_1986648 | cluster_1 | D | 17 | 11 | 36 | +++++++++++++++++CAGTCACA+++++++++++ | +++++++++++TGTGACTG+++++++++++++++++ |
| uce_m76_I_924215_924222 | I_924215_924222 | cluster_1 | D | 17 | 11 | 36 | +++++++++++++++++CAGTCACA+++++++++++ | +++++++++++TGTGACTG+++++++++++++++++ |
| uce_m80_I_911485_911492 | I_911485_911492 | cluster_1 | D | 17 | 11 | 36 | +++++++++++++++++CAGTCACA+++++++++++ | +++++++++++TGTGACTG+++++++++++++++++ |
| uce_m360_II_2790812_2790819 | II_2790812_2790819 | cluster_1 | R | 18 | 10 | 36 | ++++++++++++++++++AGGGTAGG++++++++++ | ++++++++++CCTACCCT++++++++++++++++++ |
| uce_m512_II_2171813_2171820 | II_2171813_2171820 | cluster_1 | D | 18 | 10 | 36 | ++++++++++++++++++AGGGTAGG++++++++++ | ++++++++++CCTACCCT++++++++++++++++++ |
| uce_m367_I_3043332_3043338 | I_3043332_3043338 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m676_III_1895107_1895113 | III_1895107_1895113 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m386_II_3160557_3160565 | II_3160557_3160565 | cluster_1 | D | 15 | 12 | 36 | +++++++++++++++AGCAGTCAC++++++++++++ | ++++++++++++GTGACTGCT+++++++++++++++ |
| uce_m519_III_923698_923706 | III_923698_923706 | cluster_1 | R | 15 | 12 | 36 | +++++++++++++++AGCAGTCAC++++++++++++ | ++++++++++++GTGACTGCT+++++++++++++++ |
| uce_m669_III_1358412_1358420 | III_1358412_1358420 | cluster_1 | D | 15 | 12 | 36 | +++++++++++++++AGCAGTCAC++++++++++++ | ++++++++++++GTGACTGCT+++++++++++++++ |
| uce_m705_I_4275027_4275035 | I_4275027_4275035 | cluster_1 | D | 15 | 12 | 36 | +++++++++++++++AGCAGTCAC++++++++++++ | ++++++++++++GTGACTGCT+++++++++++++++ |
| uce_m746_I_2216956_2216964 | I_2216956_2216964 | cluster_1 | D | 15 | 12 | 36 | +++++++++++++++AGCAGTCAC++++++++++++ | ++++++++++++GTGACTGCT+++++++++++++++ |
| uce_m762_II_1739893_1739901 | II_1739893_1739901 | cluster_1 | D | 15 | 12 | 36 | +++++++++++++++AGCAGTCAC++++++++++++ | ++++++++++++GTGACTGCT+++++++++++++++ |
| uce_m96_I_1198030_1198038 | I_1198030_1198038 | cluster_1 | R | 15 | 12 | 36 | +++++++++++++++AGCAGTCAC++++++++++++ | ++++++++++++GTGACTGCT+++++++++++++++ |
| uce_m388_II_3272325_3272338 | II_3272325_3272338 | cluster_1 | R | 10 | 12 | 36 | ++++++++++AAAAAAGCAGTCAC++++++++++++ | ++++++++++++GTGACTGCTTTTTT++++++++++ |
| uce_m494_I_3991964_3991977 | I_3991964_3991977 | cluster_1 | D | 10 | 12 | 36 | ++++++++++AAAAAAGCAGTCAC++++++++++++ | ++++++++++++GTGACTGCTTTTTT++++++++++ |
| uce_m417_I_1298073_1298081 | I_1298073_1298081 | cluster_1 | R | 16 | 11 | 36 | ++++++++++++++++ACAGTCACA+++++++++++ | +++++++++++TGTGACTGT++++++++++++++++ |
| uce_m513_II_2171823_2171831 | II_2171823_2171831 | cluster_1 | R | 16 | 11 | 36 | ++++++++++++++++ACAGTCACA+++++++++++ | +++++++++++TGTGACTGT++++++++++++++++ |
| uce_m433_I_2048276_2048284 | I_2048276_2048284 | cluster_1 | R | 18 | 9 | 36 | ++++++++++++++++++CGCGACGCG+++++++++ | +++++++++CGCGTCGCG++++++++++++++++++ |
| uce_m632_I_1237372_1237380 | I_1237372_1237380 | cluster_1 | R | 18 | 9 | 36 | ++++++++++++++++++CGCGACGCG+++++++++ | +++++++++CGCGTCGCG++++++++++++++++++ |
| uce_m43_II_2289275_2289284 | II_2289275_2289284 | cluster_1 | R | 17 | 9 | 36 | +++++++++++++++++TAGGKTAGGG+++++++++ | +++++++++CCCTAmCCTA+++++++++++++++++ |
| uce_m464_III_1483900_1483909 | III_1483900_1483909 | cluster_1 | R | 17 | 9 | 36 | +++++++++++++++++TAGGKTAGGG+++++++++ | +++++++++CCCTAmCCTA+++++++++++++++++ |
| uce_m627_I_2451958_2451967 | I_2451958_2451967 | cluster_1 | R | 17 | 9 | 36 | +++++++++++++++++TAGGKTAGGG+++++++++ | +++++++++CCCTAmCCTA+++++++++++++++++ |
| uce_m530_II_467394_467403 | II_467394_467403 | cluster_1 | R | 17 | 9 | 36 | +++++++++++++++++TAGGGTAGGG+++++++++ | +++++++++CCCTACCCTA+++++++++++++++++ |
| uce_m713_III_618551_618560 | III_618551_618560 | cluster_1 | R | 17 | 9 | 36 | +++++++++++++++++TAGGGTAGGG+++++++++ | +++++++++CCCTACCCTA+++++++++++++++++ |
| uce_m763_III_546767_546776 | III_546767_546776 | cluster_1 | D | 17 | 9 | 36 | +++++++++++++++++TAGGGTAGGG+++++++++ | +++++++++CCCTACCCTA+++++++++++++++++ |
| uce_m531_I_488677_488688 | I_488677_488688 | cluster_1 | R | 17 | 7 | 36 | +++++++++++++++++TAGGGTAGGGTT+++++++ | +++++++AACCCTACCCTA+++++++++++++++++ |
| uce_m730_II_3253487_3253498 | II_3253487_3253498 | cluster_1 | D | 17 | 7 | 36 | +++++++++++++++++TAGGGTAGGGTT+++++++ | +++++++AACCCTACCCTA+++++++++++++++++ |
| uce_m538_II_4383951_4383959 | II_4383951_4383959 | cluster_1 | R | 15 | 12 | 36 | +++++++++++++++AGCAGTCAC++++++++++++ | ++++++++++++GTGACTGCT+++++++++++++++ |
| uce_m602_II_4339461_4339469 | II_4339461_4339469 | cluster_1 | R | 15 | 12 | 36 | +++++++++++++++AGCAGTCAC++++++++++++ | ++++++++++++GTGACTGCT+++++++++++++++ |
| uce_m635_I_1212478_1212486 | I_1212478_1212486 | cluster_1 | D | 15 | 12 | 36 | +++++++++++++++AGCAGTCAC++++++++++++ | ++++++++++++GTGACTGCT+++++++++++++++ |
| uce_m638_I_3131897_3131905 | I_3131897_3131905 | cluster_1 | R | 15 | 12 | 36 | +++++++++++++++AGCAGTCAC++++++++++++ | ++++++++++++GTGACTGCT+++++++++++++++ |
| uce_m679_I_2806059_2806067 | I_2806059_2806067 | cluster_1 | D | 15 | 12 | 36 | +++++++++++++++AGCAGTCAC++++++++++++ | ++++++++++++GTGACTGCT+++++++++++++++ |
| uce_m686_II_4451907_4451915 | II_4451907_4451915 | cluster_1 | D | 15 | 12 | 36 | +++++++++++++++AGCAGTCAC++++++++++++ | ++++++++++++GTGACTGCT+++++++++++++++ |
| uce_m552_III_2143662_2143668 | III_2143662_2143668 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m731_II_3253508_3253514 | II_3253508_3253514 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAGTCAC++++++++++++ | ++++++++++++GTGACTG+++++++++++++++++ |
| uce_m553_III_2143638_2143649 | III_2143638_2143649 | cluster_1 | R | 16 | 8 | 36 | ++++++++++++++++TTAGGGTAGGGT++++++++ | ++++++++ACCCTACCCTAA++++++++++++++++ |
| uce_m657_II_4223880_4223891 | II_4223880_4223891 | cluster_1 | R | 16 | 8 | 36 | ++++++++++++++++TTAGGGTAGGGT++++++++ | ++++++++ACCCTACCCTAA++++++++++++++++ |
| uce_m61_I_2296792_2296799 | I_2296792_2296799 | cluster_1 | D | 16 | 12 | 36 | ++++++++++++++++ACAGTCAC++++++++++++ | ++++++++++++GTGACTGT++++++++++++++++ |
| uce_m717_III_633759_633766 | III_633759_633766 | cluster_1 | D | 16 | 12 | 36 | ++++++++++++++++ACAGTCAC++++++++++++ | ++++++++++++GTGACTGT++++++++++++++++ |
| uce_m720_III_1874602_1874609 | III_1874602_1874609 | cluster_1 | R | 16 | 12 | 36 | ++++++++++++++++ACAGTCAC++++++++++++ | ++++++++++++GTGACTGT++++++++++++++++ |
| uce_m644_II_2246105_2246114 | II_2246105_2246114 | cluster_1 | D | 17 | 9 | 36 | +++++++++++++++++TAGGkTAGGG+++++++++ | +++++++++CCCTAMCCTA+++++++++++++++++ |
| uce_m697_III_512857_512866 | III_512857_512866 | cluster_1 | D | 17 | 9 | 36 | +++++++++++++++++TAGGkTAGGG+++++++++ | +++++++++CCCTAMCCTA+++++++++++++++++ |
| uce_m64_I_2296811_2296819 | I_2296811_2296819 | cluster_1 | D | 18 | 9 | 36 | ++++++++++++++++++AGGGTAGGG+++++++++ | +++++++++CCCTACCCT++++++++++++++++++ |
| uce_m647_II_655151_655159 | II_655151_655159 | cluster_1 | R | 18 | 9 | 36 | ++++++++++++++++++AGGGTAGGG+++++++++ | +++++++++CCCTACCCT++++++++++++++++++ |
| uce_m684_I_3453833_3453842 | I_3453833_3453842 | cluster_1 | D | 17 | 9 | 36 | +++++++++++++++++TAGGGTAGGG+++++++++ | +++++++++CCCTACCCTA+++++++++++++++++ |
| uce_m739_I_1986656_1986665 | I_1986656_1986665 | cluster_1 | D | 17 | 9 | 36 | +++++++++++++++++TAGGGTAGGG+++++++++ | +++++++++CCCTACCCTA+++++++++++++++++ |
| uce_m655_I_4720157_4720163 | I_4720157_4720163 | cluster_1 | R | 15 | 13 | 36 | +++++++++++++++TTKTGATG+++++++++++++ | +++++++++++++CATCAMAA+++++++++++++++ |
| uce_m656_I_4720157_4720164 | I_4720157_4720164 | cluster_1 | D | 15 | 13 | 36 | +++++++++++++++TTTTGATG+++++++++++++ | +++++++++++++CATCAAAA+++++++++++++++ |
| uce_m418_I_1298048_1298059 | I_1298048_1298059 | cluster_1 | D | 17 | 7 | 36 | +++++++++++++++++TAGGGTAGGGTT+++++++ | +++++++AACCCTACCCTA+++++++++++++++++ |
| uce_m330_I_2148381_2148391 | I_2148381_2148391 | cluster_1 | R | 18 | 7 | 36 | ++++++++++++++++++AGGGTAGGGTT+++++++ | +++++++AACCCTACCCT++++++++++++++++++ |
| uce_m482_I_1175205_1175216 | I_1175205_1175216 | cluster_1 | D | 12 | 12 | 36 | ++++++++++++AAAArCAGTCAC++++++++++++ | ++++++++++++GTGACTGYTTTT++++++++++++ |
| uce_m651_I_3423470_3423481 | I_3423470_3423481 | cluster_1 | D | 12 | 12 | 36 | ++++++++++++AAAArCAGTCAC++++++++++++ | ++++++++++++GTGACTGYTTTT++++++++++++ |
| uce_m125_III_1407190_1407199 | III_1407190_1407199 | cluster_1 | R | 14 | 12 | 36 | ++++++++++++++AAGCAGTCAC++++++++++++ | ++++++++++++GTGACTGCTT++++++++++++++ |
| uce_m186_I_3459178_3459187 | I_3459178_3459187 | cluster_1 | D | 18 | 8 | 36 | ++++++++++++++++++AGGGTAGGGT++++++++ | ++++++++ACCCTACCCT++++++++++++++++++ |
| uce_m645_II_2243271_2243279 | II_2243271_2243279 | cluster_1 | R | 18 | 9 | 36 | ++++++++++++++++++AGGGTAGGG+++++++++ | +++++++++CCCTACCCT++++++++++++++++++ |
| uce_m688_II_2997081_2997090 | II_2997081_2997090 | cluster_1 | R | 17 | 9 | 36 | +++++++++++++++++TAGGKTAGGG+++++++++ | +++++++++CCCTAmCCTA+++++++++++++++++ |
| uce_m761_II_1739931_1739942 | II_1739931_1739942 | cluster_1 | D | 17 | 7 | 36 | +++++++++++++++++TAGGGTAGGGTT+++++++ | +++++++AACCCTACCCTA+++++++++++++++++ |
| uce_m107_II_1611854_1611862 | II_1611854_1611862 | cluster_1 | R | 18 | 9 | 36 | ++++++++++++++++++AGGTTAGGG+++++++++ | +++++++++CCCTAACCT++++++++++++++++++ |
| uce_m747_III_144538_144546 | III_144538_144546 | cluster_1 | D | 18 | 9 | 36 | ++++++++++++++++++AGGkTAGGG+++++++++ | +++++++++CCCTAMCCT++++++++++++++++++ |
| uce_m744_II_1880320_1880328 | II_1880320_1880328 | cluster_1 | R | 15 | 12 | 36 | +++++++++++++++AACAGTCAC++++++++++++ | ++++++++++++GTGACTGTT+++++++++++++++ |
| uce_m778_II_2243287_2243295 | II_2243287_2243295 | cluster_1 | R | 15 | 12 | 36 | +++++++++++++++ARCAGTCAC++++++++++++ | ++++++++++++GTGACTGyT+++++++++++++++ |
| uce_m52_I_3531448_3531455 | I_3531448_3531455 | cluster_1 | D | 17 | 11 | 36 | +++++++++++++++++TTGTTTAC+++++++++++ | +++++++++++GTAAACAA+++++++++++++++++ |
| uce_m298_I_2542636_2542643 | I_2542636_2542643 | cluster_1 | R | 17 | 11 | 36 | +++++++++++++++++TTGTTTAC+++++++++++ | +++++++++++GTAAACAA+++++++++++++++++ |
| uce_m411_II_553041_553048 | II_553041_553048 | cluster_1 | R | 18 | 10 | 36 | ++++++++++++++++++AGGGTAGG++++++++++ | ++++++++++CCTACCCT++++++++++++++++++ |
| uce_m570_II_2005364_2005372 | II_2005364_2005372 | cluster_1 | D | 15 | 12 | 36 | +++++++++++++++ArCAGTCAC++++++++++++ | ++++++++++++GTGACTGYT+++++++++++++++ |
| uce_m589_II_1501087_1501095 | II_1501087_1501095 | cluster_1 | D | 15 | 12 | 36 | +++++++++++++++ArCAGTCAC++++++++++++ | ++++++++++++GTGACTGYT+++++++++++++++ |
| uce_m104_II_3861959_3861966 | II_3861959_3861966 | cluster_1 | D | 16 | 12 | 36 | ++++++++++++++++CCAACyAC++++++++++++ | ++++++++++++GTRGTTGG++++++++++++++++ |
| uce_m568_I_3641887_3641894 | I_3641887_3641894 | cluster_1 | D | 16 | 12 | 36 | ++++++++++++++++CCAACCAC++++++++++++ | ++++++++++++GTGGTTGG++++++++++++++++ |
| uce_m269_I_3266217_3266223 | I_3266217_3266223 | cluster_1 | D | 15 | 14 | 36 | +++++++++++++++AAAAGGT++++++++++++++ | ++++++++++++++ACCTTTT+++++++++++++++ |
| uce_m514_II_2172230_2172236 | II_2172230_2172236 | cluster_1 | D | 15 | 14 | 36 | +++++++++++++++AAAAGGT++++++++++++++ | ++++++++++++++ACCTTTT+++++++++++++++ |
| uce_m65_II_2746710_2746716 | II_2746710_2746716 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++AAATTTT+++++++++++++ | +++++++++++++AAAATTT++++++++++++++++ |
| uce_m446_I_481139_481145 | I_481139_481145 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++AAATTTT+++++++++++++ | +++++++++++++AAAATTT++++++++++++++++ |
| uce_m380_II_1521572_1521578 | II_1521572_1521578 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++TTwTATA++++++++++++ | ++++++++++++TATAWAA+++++++++++++++++ |
| uce_m343_I_3831721_3831727 | I_3831721_3831727 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++CCAACyA+++++++++++++ | +++++++++++++TRGTTGG++++++++++++++++ |
| uce_m479_III_1328362_1328368 | III_1328362_1328368 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++CCAACyA+++++++++++++ | +++++++++++++TRGTTGG++++++++++++++++ |
| uce_m541_III_543125_543136 | III_543125_543136 | cluster_1 | D | 17 | 7 | 36 | +++++++++++++++++TAGGGTAGGGTT+++++++ | +++++++AACCCTACCCTA+++++++++++++++++ |
| uce_m587_II_3607591_3607599 | II_3607591_3607599 | cluster_1 | D | 18 | 9 | 36 | ++++++++++++++++++AGGkTAGGG+++++++++ | +++++++++CCCTAMCCT++++++++++++++++++ |
| uce_m397_II_3296475_3296486 | II_3296475_3296486 | cluster_1 | D | 12 | 12 | 36 | ++++++++++++AAAAGCAGTCAC++++++++++++ | ++++++++++++GTGACTGCTTTT++++++++++++ |
| uce_m265_I_3284977_3284987 | I_3284977_3284987 | cluster_1 | D | 17 | 8 | 36 | +++++++++++++++++TAGGGTAGGGT++++++++ | ++++++++ACCCTACCCTA+++++++++++++++++ |
| uce_m617_I_3417780_3417790 | I_3417780_3417790 | cluster_1 | R | 18 | 7 | 36 | ++++++++++++++++++GGGTTAGGGTT+++++++ | +++++++AACCCTAACCC++++++++++++++++++ |
| uce_m682_I_2922836_2922846 | I_2922836_2922846 | cluster_1 | D | 18 | 7 | 36 | ++++++++++++++++++GGGTTAGGGTT+++++++ | +++++++AACCCTAACCC++++++++++++++++++ |
| uce_m193_I_1723634_1723647 | I_1723634_1723647 | cluster_1 | D | 10 | 12 | 36 | ++++++++++AAAAAAGCAGTCAC++++++++++++ | ++++++++++++GTGACTGCTTTTTT++++++++++ |
| uce_m106_II_1619501_1619509 | II_1619501_1619509 | cluster_1 | R | 16 | 11 | 36 | ++++++++++++++++TTTGTTTAC+++++++++++ | +++++++++++GTAAACAAA++++++++++++++++ |
| uce_m159_I_2861867_2861875 | I_2861867_2861875 | cluster_1 | R | 16 | 11 | 36 | ++++++++++++++++TTTGTTTAC+++++++++++ | +++++++++++GTAAACAAA++++++++++++++++ |
| uce_m54_II_2133434_2133442 | II_2133434_2133442 | cluster_1 | D | 17 | 10 | 36 | +++++++++++++++++TAGGGTAGG++++++++++ | ++++++++++CCTACCCTA+++++++++++++++++ |
| uce_m510_II_678082_678090 | II_678082_678090 | cluster_1 | D | 17 | 10 | 36 | +++++++++++++++++TAGGGTAGG++++++++++ | ++++++++++CCTACCCTA+++++++++++++++++ |
| uce_m84_III_95538_95551 | III_95538_95551 | cluster_1 | R | 10 | 12 | 36 | ++++++++++AAAAAAGCAGTCAC++++++++++++ | ++++++++++++GTGACTGCTTTTTT++++++++++ |
| uce_m259_II_2317654_2317660 | II_2317654_2317660 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++ACGCGTC++++++++++++ | ++++++++++++GACGCGT+++++++++++++++++ |
| uce_m277_I_3405030_3405036 | I_3405030_3405036 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++ACGCGTC++++++++++++ | ++++++++++++GACGCGT+++++++++++++++++ |
| uce_m491_II_521616_521625 | II_521616_521625 | cluster_1 | D | 17 | 9 | 36 | +++++++++++++++++TAGGGTAGGG+++++++++ | +++++++++CCCTACCCTA+++++++++++++++++ |
| uce_m741_II_1881878_1881887 | II_1881878_1881887 | cluster_1 | R | 14 | 12 | 36 | ++++++++++++++AAGCAGTCAC++++++++++++ | ++++++++++++GTGACTGCTT++++++++++++++ |
| uce_m108_II_1611833_1611840 | II_1611833_1611840 | cluster_1 | R | 16 | 12 | 36 | ++++++++++++++++ACAGTCAC++++++++++++ | ++++++++++++GTGACTGT++++++++++++++++ |
| uce_m47_II_3927162_3927169 | II_3927162_3927169 | cluster_1 | R | 16 | 12 | 36 | ++++++++++++++++TTTGTTTA++++++++++++ | ++++++++++++TAAACAAA++++++++++++++++ |
| uce_m280_I_3369909_3369919 | I_3369909_3369919 | cluster_1 | D | 18 | 7 | 36 | ++++++++++++++++++AGGGTAGGGyT+++++++ | +++++++ARCCCTACCCT++++++++++++++++++ |
| uce_m176_II_4477264_4477270 | II_4477264_4477270 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++TTTTTTT+++++++++++++ | +++++++++++++AAAAAAA++++++++++++++++ |
| uce_m787_II_1833780_1833786 | II_1833780_1833786 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++TTTTTTT+++++++++++++ | +++++++++++++AAAAAAA++++++++++++++++ |
| uce_m221_I_2176710_2176716 | I_2176710_2176716 | cluster_1 | D | 18 | 11 | 36 | ++++++++++++++++++TGTTTAC+++++++++++ | +++++++++++GTAAACA++++++++++++++++++ |
| uce_m350_I_3870689_3870695 | I_3870689_3870695 | cluster_1 | D | 18 | 11 | 36 | ++++++++++++++++++TGTTTAC+++++++++++ | +++++++++++GTAAACA++++++++++++++++++ |
| uce_m250_I_5169107_5169113 | I_5169107_5169113 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++GGTATGT+++++++++++++ | +++++++++++++ACATACC++++++++++++++++ |
| uce_m328_II_3754514_3754520 | II_3754514_3754520 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++GGTATGT+++++++++++++ | +++++++++++++ACATACC++++++++++++++++ |
| uce_m318_I_5283978_5283984 | I_5283978_5283984 | cluster_1 | R | 15 | 14 | 36 | +++++++++++++++ATTTCAT++++++++++++++ | ++++++++++++++ATGAAAT+++++++++++++++ |
| uce_m598_II_4370555_4370561 | II_4370555_4370561 | cluster_1 | R | 15 | 14 | 36 | +++++++++++++++ATTTCAT++++++++++++++ | ++++++++++++++ATGAAAT+++++++++++++++ |
| uce_m364_I_5437487_5437493 | I_5437487_5437493 | cluster_1 | R | 18 | 11 | 36 | ++++++++++++++++++AGTCACA+++++++++++ | +++++++++++TGTGACT++++++++++++++++++ |
| uce_m423_III_1688157_1688163 | III_1688157_1688163 | cluster_1 | D | 18 | 11 | 36 | ++++++++++++++++++AGTCACA+++++++++++ | +++++++++++TGTGACT++++++++++++++++++ |
| uce_m693_I_4117374_4117385 | I_4117374_4117385 | cluster_1 | D | 12 | 12 | 36 | ++++++++++++AAAAACAGTCAC++++++++++++ | ++++++++++++GTGACTGTTTTT++++++++++++ |
| uce_m437_II_1844464_1844470 | II_1844464_1844470 | cluster_1 | R | 18 | 11 | 36 | ++++++++++++++++++AGTCACA+++++++++++ | +++++++++++TGTGACT++++++++++++++++++ |
| uce_m395_II_3223890_3223896 | II_3223890_3223896 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAACCAC++++++++++++ | ++++++++++++GTGGTTG+++++++++++++++++ |
| uce_m796_I_5063255_5063261 | I_5063255_5063261 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAACCAC++++++++++++ | ++++++++++++GTGGTTG+++++++++++++++++ |
| uce_m577_I_4250473_4250479 | I_4250473_4250479 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++ATWTATA++++++++++++ | ++++++++++++TATAwAT+++++++++++++++++ |
| uce_m751_II_681518_681524 | II_681518_681524 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++ATATATA++++++++++++ | ++++++++++++TATATAT+++++++++++++++++ |
| uce_m207_II_1638333_1638339 | II_1638333_1638339 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++AAGGrTA++++++++++++ | ++++++++++++TAYCCTT+++++++++++++++++ |
| uce_m797_II_398250_398256 | II_398250_398256 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++AAGGRTA++++++++++++ | ++++++++++++TAyCCTT+++++++++++++++++ |
| uce_m2_II_3554786_3554798 | II_3554786_3554798 | cluster_1 | D | 14 | 9 | 36 | ++++++++++++++TGTTTGTTTACAT+++++++++ | +++++++++ATGTAAACAAACA++++++++++++++ |
| uce_m615_I_3420719_3420731 | I_3420719_3420731 | cluster_1 | D | 14 | 9 | 36 | ++++++++++++++TGTTTGTTTACAT+++++++++ | +++++++++ATGTAAACAAACA++++++++++++++ |
| uce_m707_II_571204_571216 | II_571204_571216 | cluster_1 | R | 11 | 12 | 36 | +++++++++++AAAAAGCAGTCAC++++++++++++ | ++++++++++++GTGACTGCTTTTT+++++++++++ |
| uce_m712_I_188313_188325 | I_188313_188325 | cluster_1 | D | 11 | 12 | 36 | +++++++++++AAAAAGCAGTCAC++++++++++++ | ++++++++++++GTGACTGCTTTTT+++++++++++ |
| uce_m246_I_4520086_4520092 | I_4520086_4520092 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++AAATTTT+++++++++++++ | +++++++++++++AAAATTT++++++++++++++++ |
| uce_m237_I_4117364_4117370 | I_4117364_4117370 | cluster_1 | R | 18 | 11 | 36 | ++++++++++++++++++CAACACA+++++++++++ | +++++++++++TGTGTTG++++++++++++++++++ |
| uce_m379_II_1553356_1553362 | II_1553356_1553362 | cluster_1 | D | 18 | 11 | 36 | ++++++++++++++++++CAACACA+++++++++++ | +++++++++++TGTGTTG++++++++++++++++++ |
| uce_m623_I_2420704_2420710 | I_2420704_2420710 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++ATTTATT+++++++++++++ | +++++++++++++AATAAAT++++++++++++++++ |
| uce_m637_I_3131370_3131376 | I_3131370_3131376 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++ATTTATT+++++++++++++ | +++++++++++++AATAAAT++++++++++++++++ |
| uce_m631_II_3614500_3614506 | II_3614500_3614506 | cluster_1 | R | 18 | 11 | 36 | ++++++++++++++++++TGTTTAC+++++++++++ | +++++++++++GTAAACA++++++++++++++++++ |
| uce_m178_II_4443451_4443458 | II_4443451_4443458 | cluster_1 | D | 15 | 13 | 36 | +++++++++++++++ACCAACTA+++++++++++++ | +++++++++++++TAGTTGGT+++++++++++++++ |
| uce_m758_III_804145_804152 | III_804145_804152 | cluster_1 | D | 15 | 13 | 36 | +++++++++++++++ACCAACTA+++++++++++++ | +++++++++++++TAGTTGGT+++++++++++++++ |
| uce_m357_II_2828054_2828061 | II_2828054_2828061 | cluster_1 | D | 18 | 10 | 36 | ++++++++++++++++++CACCACCA++++++++++ | ++++++++++TGGTGGTG++++++++++++++++++ |
| uce_m442_III_1970291_1970298 | III_1970291_1970298 | cluster_1 | D | 18 | 10 | 36 | ++++++++++++++++++CACCACCA++++++++++ | ++++++++++TGGTGGTG++++++++++++++++++ |
| uce_m233_II_1322499_1322505 | II_1322499_1322505 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++TTTTTTG+++++++++++++ | +++++++++++++CAAAAAA++++++++++++++++ |
| uce_m355_II_2836636_2836642 | II_2836636_2836642 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++TTTTTTG+++++++++++++ | +++++++++++++CAAAAAA++++++++++++++++ |
| uce_m323_II_3414365_3414372 | II_3414365_3414372 | cluster_1 | D | 15 | 13 | 36 | +++++++++++++++AAAAwTTT+++++++++++++ | +++++++++++++AAAWTTTT+++++++++++++++ |
| uce_m396_II_3223879_3223886 | II_3223879_3223886 | cluster_1 | D | 15 | 13 | 36 | +++++++++++++++AAAATTTT+++++++++++++ | +++++++++++++AAAATTTT+++++++++++++++ |
| uce_m166_I_2748721_2748727 | I_2748721_2748727 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAACCAC++++++++++++ | ++++++++++++GTGGTTG+++++++++++++++++ |
| uce_m220_I_2176673_2176679 | I_2176673_2176679 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++TTTGTTT+++++++++++++ | +++++++++++++AAACAAA++++++++++++++++ |
| uce_m326_II_3564822_3564828 | II_3564822_3564828 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++TTTGTTT+++++++++++++ | +++++++++++++AAACAAA++++++++++++++++ |
| uce_m292_II_1004800_1004807 | II_1004800_1004807 | cluster_1 | D | 15 | 13 | 36 | +++++++++++++++TTTTGATG+++++++++++++ | +++++++++++++CATCAAAA+++++++++++++++ |
| uce_m672_III_2104158_2104168 | III_2104158_2104168 | cluster_1 | D | 18 | 7 | 36 | ++++++++++++++++++GGGTwAGGGTT+++++++ | +++++++AACCCTWACCC++++++++++++++++++ |
| uce_m772_II_2907570_2907580 | II_2907570_2907580 | cluster_1 | R | 18 | 7 | 36 | ++++++++++++++++++GGGTAAGGGTT+++++++ | +++++++AACCCTTACCC++++++++++++++++++ |
| uce_m586_II_3607617_3607625 | II_3607617_3607625 | cluster_1 | R | 15 | 12 | 36 | +++++++++++++++AACAGTCAC++++++++++++ | ++++++++++++GTGACTGTT+++++++++++++++ |
| uce_m252_I_4311013_4311025 | I_4311013_4311025 | cluster_1 | D | 12 | 11 | 36 | ++++++++++++AAArACAGTCACA+++++++++++ | +++++++++++TGTGACTGTYTTT++++++++++++ |
| uce_m628_I_2451977_2451989 | I_2451977_2451989 | cluster_1 | D | 12 | 11 | 36 | ++++++++++++AAAcACAGTCACA+++++++++++ | +++++++++++TGTGACTGTGTTT++++++++++++ |
| uce_m485_II_270633_270639 | II_270633_270639 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++ATATATA++++++++++++ | ++++++++++++TATATAT+++++++++++++++++ |
| uce_m654_II_3629705_3629715 | II_3629705_3629715 | cluster_1 | D | 18 | 7 | 36 | ++++++++++++++++++GGGTTmGGGTT+++++++ | +++++++AACCCKAACCC++++++++++++++++++ |
| uce_m486_I_200812_200822 | I_200812_200822 | cluster_1 | D | 16 | 9 | 36 | ++++++++++++++++TTTGTTTACAT+++++++++ | +++++++++ATGTAAACAAA++++++++++++++++ |
| uce_m696_I_2272275_2272285 | I_2272275_2272285 | cluster_1 | D | 16 | 9 | 36 | ++++++++++++++++TTTGTTTACkT+++++++++ | +++++++++AMGTAAACAAA++++++++++++++++ |
| uce_m168_I_2874579_2874585 | I_2874579_2874585 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++TTGTTTA++++++++++++ | ++++++++++++TAAACAA+++++++++++++++++ |
| uce_m383_II_3209517_3209523 | II_3209517_3209523 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++TyGTTTA++++++++++++ | ++++++++++++TAAACRA+++++++++++++++++ |
| uce_m51_I_3546088_3546094 | I_3546088_3546094 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++TTTTTtT+++++++++++++ | +++++++++++++AAAAAAA++++++++++++++++ |
| uce_m609_I_4033510_4033521 | I_4033510_4033521 | cluster_1 | D | 17 | 7 | 36 | +++++++++++++++++AGGGTwAGGGTT+++++++ | +++++++AACCCTWACCCT+++++++++++++++++ |
| uce_m620_I_2069662_2069668 | I_2069662_2069668 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++AtTTATT+++++++++++++ | +++++++++++++AATAAAT++++++++++++++++ |
| uce_m344_I_3833117_3833123 | I_3833117_3833123 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++CRGTCAC++++++++++++ | ++++++++++++GTGACyG+++++++++++++++++ |
| uce_m723_III_1042692_1042702 | III_1042692_1042702 | cluster_1 | D | 15 | 10 | 36 | +++++++++++++++ArCAGTCACAA++++++++++ | ++++++++++TTGTGACTGYT+++++++++++++++ |
| uce_m487_I_834331_834337 | I_834331_834337 | cluster_1 | R | 15 | 14 | 36 | +++++++++++++++TACATCA++++++++++++++ | ++++++++++++++TGATGTA+++++++++++++++ |
| uce_m501_II_226709_226715 | II_226709_226715 | cluster_1 | R | 15 | 14 | 36 | +++++++++++++++TACATCA++++++++++++++ | ++++++++++++++TGATGtA+++++++++++++++ |
| uce_m571_I_3745495_3745502 | I_3745495_3745502 | cluster_1 | R | 18 | 10 | 36 | ++++++++++++++++++CACCRCCA++++++++++ | ++++++++++TGGyGGTG++++++++++++++++++ |
| uce_m378_II_1566958_1566965 | II_1566958_1566965 | cluster_1 | D | 18 | 10 | 36 | ++++++++++++++++++AGGkTAGG++++++++++ | ++++++++++CCTAMCCT++++++++++++++++++ |
| uce_m311_III_645566_645574 | III_645566_645574 | cluster_1 | R | 17 | 10 | 36 | +++++++++++++++++TCACCACCA++++++++++ | ++++++++++TGGTGGTGA+++++++++++++++++ |
| uce_m736_II_1161771_1161779 | II_1161771_1161779 | cluster_1 | R | 17 | 10 | 36 | +++++++++++++++++TCACYACCA++++++++++ | ++++++++++TGGTrGTGA+++++++++++++++++ |
| uce_m680_I_2759264_2759272 | I_2759264_2759272 | cluster_1 | D | 15 | 12 | 36 | +++++++++++++++AcCAGTCAC++++++++++++ | ++++++++++++GTGACTGGT+++++++++++++++ |
| uce_m452_II_3315928_3315934 | II_3315928_3315934 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++TTkTGTA++++++++++++ | ++++++++++++TACAMAA+++++++++++++++++ |
| uce_m453_II_3315929_3315934 | II_3315929_3315934 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++TTGTGTA++++++++++++ | ++++++++++++TACACAA+++++++++++++++++ |
| uce_m136_II_2603884_2603897 | II_2603884_2603897 | cluster_1 | R | 10 | 12 | 36 | ++++++++++AAAAAARCAGTCAC++++++++++++ | ++++++++++++GTGACTGYTTTTTT++++++++++ |
| uce_m219_I_2384227_2384233 | I_2384227_2384233 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CTwCCAA++++++++++++ | ++++++++++++TTGGWAG+++++++++++++++++ |
| uce_m470_III_1532049_1532055 | III_1532049_1532055 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CTACCAA++++++++++++ | ++++++++++++TTGGTAG+++++++++++++++++ |
| uce_m710_II_313964_313976 | II_313964_313976 | cluster_1 | D | 11 | 12 | 36 | +++++++++++AAAAAACAGTCAC++++++++++++ | ++++++++++++GTGACTGTTTTTT+++++++++++ |
| uce_m227_III_697602_697611 | III_697602_697611 | cluster_1 | D | 17 | 9 | 36 | +++++++++++++++++TrGGGTAGGG+++++++++ | +++++++++CCCTACCCYA+++++++++++++++++ |
| uce_m408_II_570294_570305 | II_570294_570305 | cluster_1 | R | 17 | 7 | 36 | +++++++++++++++++TAGGGTAGGGCT+++++++ | +++++++AGCCCTACCCTA+++++++++++++++++ |
| uce_m529_II_467456_467471 | II_467456_467471 | cluster_1 | R | 9 | 11 | 36 | +++++++++ACAAGCAACAACCAAC+++++++++++ | +++++++++++GTTGGTTGTTGCTtGT+++++++++ |
| uce_m760_II_467456_467472 | II_467456_467472 | cluster_1 | D | 9 | 10 | 36 | +++++++++ACaAGCAACAACCAACT++++++++++ | ++++++++++AGTTGGTTGTTGCTTGT+++++++++ |
| uce_m398_III_124975_124982 | III_124975_124982 | cluster_1 | R | 20 | 8 | 36 | ++++++++++++++++++++TGACGTMA++++++++ | ++++++++TkACGTCA++++++++++++++++++++ |
| uce_m775_II_3632959_3632966 | II_3632959_3632966 | cluster_1 | R | 20 | 8 | 36 | ++++++++++++++++++++TGACGTCA++++++++ | ++++++++TGACGTCA++++++++++++++++++++ |
| uce_m131_III_1895288_1895294 | III_1895288_1895294 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++AAGGGTA++++++++++++ | ++++++++++++TACCCTT+++++++++++++++++ |
| uce_m661_II_2280476_2280488 | II_2280476_2280488 | cluster_1 | D | 12 | 11 | 36 | ++++++++++++AAAArCAGTCACA+++++++++++ | +++++++++++TGTGACTGYTTTT++++++++++++ |
| uce_m119_III_1401267_1401273 | III_1401267_1401273 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++TCCCAMT++++++++++++ | ++++++++++++AkTGGGA+++++++++++++++++ |
| uce_m471_III_1258061_1258067 | III_1258061_1258067 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++TCCCAGT++++++++++++ | ++++++++++++AcTGGGA+++++++++++++++++ |
| uce_m70_I_1000860_1000866 | I_1000860_1000866 | cluster_1 | D | 18 | 11 | 36 | ++++++++++++++++++AACyAAC+++++++++++ | +++++++++++GTTRGTT++++++++++++++++++ |
| uce_m316_II_1010123_1010129 | II_1010123_1010129 | cluster_1 | D | 18 | 11 | 36 | ++++++++++++++++++AACCAAC+++++++++++ | +++++++++++GTTGGTT++++++++++++++++++ |
| uce_m351_II_2878912_2878922 | II_2878912_2878922 | cluster_1 | D | 13 | 12 | 36 | +++++++++++++AAGGCAGTCAC++++++++++++ | ++++++++++++GTGACTGCCTT+++++++++++++ |
| uce_m732_II_3296475_3296484 | II_3296475_3296484 | cluster_1 | R | 13 | 12 | 36 | +++++++++++++AAAGCAGTCAC++++++++++++ | ++++++++++++GTGACTGCTTT+++++++++++++ |
| uce_m523_III_804145_804153 | III_804145_804153 | cluster_1 | R | 15 | 12 | 36 | +++++++++++++++ACCAACTAC++++++++++++ | ++++++++++++GTAGTTGGT+++++++++++++++ |
| uce_m536_I_4944763_4944771 | I_4944763_4944771 | cluster_1 | D | 15 | 12 | 36 | +++++++++++++++ACCAACAAC++++++++++++ | ++++++++++++GTTGTTGGT+++++++++++++++ |
| uce_m116_I_698990_698997 | I_698990_698997 | cluster_1 | R | 20 | 8 | 36 | ++++++++++++++++++++GKAAGGGT++++++++ | ++++++++ACCCTTmC++++++++++++++++++++ |
| uce_m374_I_4846684_4846691 | I_4846684_4846691 | cluster_1 | R | 20 | 8 | 36 | ++++++++++++++++++++GTAAGGGT++++++++ | ++++++++ACCCTTAC++++++++++++++++++++ |
| uce_m563_II_807073_807085 | II_807073_807085 | cluster_1 | D | 16 | 7 | 36 | ++++++++++++++++ACAGTCACAtAAA+++++++ | +++++++TTTATGTGACTGT++++++++++++++++ |
| uce_m564_II_807074_807085 | II_807074_807085 | cluster_1 | R | 17 | 7 | 36 | +++++++++++++++++CAGTCACATAAA+++++++ | +++++++TTTaTGTGACTG+++++++++++++++++ |
| uce_m69_II_2717829_2717840 | II_2717829_2717840 | cluster_1 | D | 15 | 9 | 36 | +++++++++++++++GTTTGTTTACAT+++++++++ | +++++++++ATGTAAACAAAC+++++++++++++++ |
| uce_m17_I_5339863_5339872 | I_5339863_5339872 | cluster_1 | R | 14 | 12 | 36 | ++++++++++++++AACCAGTCAC++++++++++++ | ++++++++++++GTGACTGGTT++++++++++++++ |
| uce_m185_I_3459756_3459767 | I_3459756_3459767 | cluster_1 | D | 11 | 13 | 36 | +++++++++++AGACGTCGAGGA+++++++++++++ | +++++++++++++TCCTCGACGTCT+++++++++++ |
| uce_m683_I_3459756_3459766 | I_3459756_3459766 | cluster_1 | R | 12 | 13 | 36 | ++++++++++++GACGTCGAGGA+++++++++++++ | +++++++++++++TCCTCGACGTC++++++++++++ |
| uce_m98_II_1112562_1112569 | II_1112562_1112569 | cluster_1 | R | 16 | 12 | 36 | ++++++++++++++++TTTTTTGG++++++++++++ | ++++++++++++CCAAAAAA++++++++++++++++ |
| uce_m769_II_2233946_2233953 | II_2233946_2233953 | cluster_1 | D | 16 | 12 | 36 | ++++++++++++++++TTTTTTyG++++++++++++ | ++++++++++++CRAAAAAA++++++++++++++++ |
| uce_m400_III_2048306_2048314 | III_2048306_2048314 | cluster_1 | D | 18 | 9 | 36 | ++++++++++++++++++CGCGACTCG+++++++++ | +++++++++CGAGTCGCG++++++++++++++++++ |
| uce_m352_II_2859347_2859353 | II_2859347_2859353 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++AyTTGTT++++++++++++ | ++++++++++++AACAART+++++++++++++++++ |
| uce_m558_III_2146622_2146628 | III_2146622_2146628 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++ACTTGTT++++++++++++ | ++++++++++++AACAAGT+++++++++++++++++ |
| uce_m71_I_1010203_1010214 | I_1010203_1010214 | cluster_1 | D | 13 | 11 | 36 | +++++++++++++TTGTTTATTTAC+++++++++++ | +++++++++++GTAAATAAACAA+++++++++++++ |
| uce_m562_II_1924100_1924110 | II_1924100_1924110 | cluster_1 | D | 13 | 12 | 36 | +++++++++++++TTGTTTATTTA++++++++++++ | ++++++++++++TAAATAAACAA+++++++++++++ |
| uce_m743_II_1880291_1880302 | II_1880291_1880302 | cluster_1 | D | 15 | 9 | 36 | +++++++++++++++AGCAGTCACAAA+++++++++ | +++++++++TTTGTGACTGCT+++++++++++++++ |
| uce_m230_II_2645099_2645105 | II_2645099_2645105 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++TGTGTTT+++++++++++++ | +++++++++++++AAACACA++++++++++++++++ |
| uce_m261_I_1069987_1069993 | I_1069987_1069993 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++TGTATTT+++++++++++++ | +++++++++++++AAAtACA++++++++++++++++ |
| uce_m480_I_1172584_1172594 | I_1172584_1172594 | cluster_1 | D | 14 | 11 | 36 | ++++++++++++++TGTTTGTTTAC+++++++++++ | +++++++++++GTAAACAAACA++++++++++++++ |
| uce_m599_II_4374848_4374857 | II_4374848_4374857 | cluster_1 | D | 14 | 12 | 36 | ++++++++++++++TGTTTGTTTA++++++++++++ | ++++++++++++TAAACAAACA++++++++++++++ |
| uce_m601_II_4339486_4339494 | II_4339486_4339494 | cluster_1 | R | 17 | 10 | 36 | +++++++++++++++++TAGGGTATG++++++++++ | ++++++++++CATACCCTA+++++++++++++++++ |
| uce_m140_I_3662834_3662840 | I_3662834_3662840 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++CAACTAC++++++++++++ | ++++++++++++GTAGTTG+++++++++++++++++ |
| uce_m321_II_531245_531254 | II_531245_531254 | cluster_1 | D | 17 | 9 | 36 | +++++++++++++++++ACGCGACGCG+++++++++ | +++++++++CGCGTCGCGT+++++++++++++++++ |
| uce_m578_I_4235973_4235983 | I_4235973_4235983 | cluster_1 | R | 16 | 9 | 36 | ++++++++++++++++AACGCGACGCG+++++++++ | +++++++++CGCGTCGCGTT++++++++++++++++ |
| uce_m288_II_1237459_1237468 | II_1237459_1237468 | cluster_1 | D | 16 | 10 | 36 | ++++++++++++++++TTTCTTTGTT++++++++++ | ++++++++++AACAAAGAAA++++++++++++++++ |
| uce_m365_I_285531_285539 | I_285531_285539 | cluster_1 | D | 16 | 11 | 36 | ++++++++++++++++TTTCTTTGT+++++++++++ | +++++++++++ACAAAGAAA++++++++++++++++ |
| uce_m504_I_2362053_2362061 | I_2362053_2362061 | cluster_1 | R | 18 | 9 | 36 | ++++++++++++++++++GGAGTACTG+++++++++ | +++++++++CAGTACTCC++++++++++++++++++ |
| uce_m507_I_2362053_2362062 | I_2362053_2362062 | cluster_1 | D | 17 | 9 | 36 | +++++++++++++++++TGGAGTACTG+++++++++ | +++++++++CAGTACTCCA+++++++++++++++++ |
| uce_m293_I_2024284_2024295 | I_2024284_2024295 | cluster_1 | R | 12 | 12 | 36 | ++++++++++++AAATACAGTCAC++++++++++++ | ++++++++++++GTGACTGTATTT++++++++++++ |
| uce_m737_I_1287937_1287948 | I_1287937_1287948 | cluster_1 | R | 12 | 12 | 36 | ++++++++++++AAAGACAGTCAC++++++++++++ | ++++++++++++GTGACTGTCTTT++++++++++++ |
| uce_m511_II_678058_678065 | II_678058_678065 | cluster_1 | D | 17 | 11 | 36 | +++++++++++++++++CCGTCACA+++++++++++ | +++++++++++TGTGACGG+++++++++++++++++ |
| uce_m256_I_2255094_2255102 | I_2255094_2255102 | cluster_1 | D | 17 | 10 | 36 | +++++++++++++++++CAGTCACAA++++++++++ | ++++++++++TTGTGACTG+++++++++++++++++ |
| uce_m703_I_3360651_3360660 | I_3360651_3360660 | cluster_1 | D | 17 | 9 | 36 | +++++++++++++++++CAGTCACAAA+++++++++ | +++++++++TTTGTGACTG+++++++++++++++++ |
| uce_m359_II_2790822_2790830 | II_2790822_2790830 | cluster_1 | D | 17 | 10 | 36 | +++++++++++++++++CAGTCACTA++++++++++ | ++++++++++TAGTGACTG+++++++++++++++++ |
| uce_m722_II_2790822_2790829 | II_2790822_2790829 | cluster_1 | R | 18 | 10 | 36 | ++++++++++++++++++AGTCACTA++++++++++ | ++++++++++TAGTGACT++++++++++++++++++ |
| uce_m22_I_1907908_1907916 | I_1907908_1907916 | cluster_1 | D | 14 | 13 | 36 | ++++++++++++++AGCCAACCA+++++++++++++ | +++++++++++++TGGTTGGCT++++++++++++++ |
| uce_m118_II_3496585_3496594 | II_3496585_3496594 | cluster_1 | D | 13 | 13 | 36 | +++++++++++++CAGCCAACCA+++++++++++++ | +++++++++++++TGGTTGGCTG+++++++++++++ |
| uce_m25_II_1595702_1595709 | II_1595702_1595709 | cluster_1 | D | 16 | 12 | 36 | ++++++++++++++++TTTACCAA++++++++++++ | ++++++++++++TTGGTAAA++++++++++++++++ |
| uce_m622_II_1292325_1292332 | II_1292325_1292332 | cluster_1 | D | 16 | 12 | 36 | ++++++++++++++++TCTACCAA++++++++++++ | ++++++++++++TTGGTAGA++++++++++++++++ |
| uce_m502_II_3444086_3444093 | II_3444086_3444093 | cluster_1 | R | 15 | 12 | 36 | +++++++++++++++TTTTGTTTA++++++++++++ | ++++++++++++TAAACAAAA+++++++++++++++ |
| uce_m750_I_861912_861921 | I_861912_861921 | cluster_1 | D | 15 | 11 | 36 | +++++++++++++++ArCAGTCACA+++++++++++ | +++++++++++TGTGACTGYT+++++++++++++++ |
| uce_m105_II_1617024_1617030 | II_1617024_1617030 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++TCTGCCA+++++++++++++ | +++++++++++++TGGCAGA++++++++++++++++ |
| uce_m306_III_1795259_1795265 | III_1795259_1795265 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++TTTGCCA+++++++++++++ | +++++++++++++TGGCAAA++++++++++++++++ |
| uce_m27_I_322319_322325 | I_322319_322325 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++TTATATT+++++++++++++ | +++++++++++++AATATAA++++++++++++++++ |
| uce_m102_II_3806750_3806757 | II_3806750_3806757 | cluster_1 | D | 15 | 13 | 36 | +++++++++++++++ACCAACCA+++++++++++++ | +++++++++++++TGGTTGGT+++++++++++++++ |
| uce_m114_II_3083759_3083767 | II_3083759_3083767 | cluster_1 | D | 15 | 12 | 36 | +++++++++++++++ACCAACCAC++++++++++++ | ++++++++++++GTGGTTGGT+++++++++++++++ |
| uce_m522_III_845619_845627 | III_845619_845627 | cluster_1 | D | 15 | 12 | 36 | +++++++++++++++GTTTGTTTA++++++++++++ | ++++++++++++TAAACAAAC+++++++++++++++ |
| uce_m765_I_1450802_1450813 | I_1450802_1450813 | cluster_1 | D | 13 | 11 | 36 | +++++++++++++AAAGCAGTCACA+++++++++++ | +++++++++++TGTGACTGCTTT+++++++++++++ |
| uce_m139_I_3662908_3662914 | I_3662908_3662914 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++TATTTTT+++++++++++++ | +++++++++++++AAAAATA++++++++++++++++ |
| uce_m58_I_354628_354634 | I_354628_354634 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++GCAGTCA+++++++++++++ | +++++++++++++TGACTGC++++++++++++++++ |
| uce_m95_I_1198057_1198064 | I_1198057_1198064 | cluster_1 | D | 15 | 13 | 36 | +++++++++++++++TTCTgGAA+++++++++++++ | +++++++++++++TTCCAGAA+++++++++++++++ |
| uce_m673_III_2104177_2104185 | III_2104177_2104185 | cluster_1 | R | 15 | 12 | 36 | +++++++++++++++TTCTSGAAG++++++++++++ | ++++++++++++CTTCsAGAA+++++++++++++++ |
| uce_m216_III_384918_384924 | III_384918_384924 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++ATTTATA++++++++++++ | ++++++++++++TATAAAT+++++++++++++++++ |
| uce_m222_III_2455915_2455923 | III_2455915_2455923 | cluster_1 | R | 15 | 12 | 36 | +++++++++++++++TGGTAAGTT++++++++++++ | ++++++++++++AACTTACCA+++++++++++++++ |
| uce_m526_II_2636210_2636217 | II_2636210_2636217 | cluster_1 | R | 16 | 12 | 36 | ++++++++++++++++GGTAAGTT++++++++++++ | ++++++++++++AACTTACC++++++++++++++++ |
| uce_m5_II_2492762_2492769 | II_2492762_2492769 | cluster_1 | R | 17 | 11 | 36 | +++++++++++++++++ACGCGTCG+++++++++++ | +++++++++++CGACGCGT+++++++++++++++++ |
| uce_m795_II_4385963_4385971 | II_4385963_4385971 | cluster_1 | R | 17 | 10 | 36 | +++++++++++++++++ACGCGTCGC++++++++++ | ++++++++++GCGACGCGT+++++++++++++++++ |
| uce_m74_I_1050753_1050759 | I_1050753_1050759 | cluster_1 | R | 20 | 9 | 36 | ++++++++++++++++++++TGACGTA+++++++++ | +++++++++TACGTCA++++++++++++++++++++ |
| uce_m648_II_3527095_3527102 | II_3527095_3527102 | cluster_1 | D | 19 | 9 | 36 | +++++++++++++++++++GTGACGTA+++++++++ | +++++++++TACGTCAC+++++++++++++++++++ |
| uce_m244_I_4838098_4838104 | I_4838098_4838104 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++TyCTTTG++++++++++++ | ++++++++++++CAAAGRA+++++++++++++++++ |
| uce_m435_I_5269197_5269204 | I_5269197_5269204 | cluster_1 | R | 17 | 11 | 36 | +++++++++++++++++TYCTTTGT+++++++++++ | +++++++++++ACAAAGrA+++++++++++++++++ |
| uce_m281_I_3362070_3362078 | I_3362070_3362078 | cluster_1 | D | 19 | 8 | 36 | +++++++++++++++++++ACCACGACG++++++++ | ++++++++CGTCGTGGT+++++++++++++++++++ |
| uce_m574_I_3422244_3422251 | I_3422244_3422251 | cluster_1 | R | 19 | 9 | 36 | +++++++++++++++++++ACCAMGAC+++++++++ | +++++++++GTCkTGGT+++++++++++++++++++ |
| uce_m305_III_1779943_1779949 | III_1779943_1779949 | cluster_1 | D | 14 | 14 | 36 | ++++++++++++++AACCAAAC++++++++++++++ | ++++++++++++++GTTTGGTT++++++++++++++ |
| uce_m309_II_316046_316054 | II_316046_316054 | cluster_1 | R | 14 | 13 | 36 | ++++++++++++++AACCAAAYA+++++++++++++ | +++++++++++++TrTTTGGTT++++++++++++++ |
| uce_m290_II_994861_994868 | II_994861_994868 | cluster_1 | D | 15 | 13 | 36 | +++++++++++++++CAAATTTT+++++++++++++ | +++++++++++++AAAATTTG+++++++++++++++ |
| uce_m503_II_3422970_3422980 | II_3422970_3422980 | cluster_1 | D | 13 | 12 | 36 | +++++++++++++CCAACAACGAA++++++++++++ | ++++++++++++TTCGTTGTTGG+++++++++++++ |
| uce_m706_I_4274967_4274977 | I_4274967_4274977 | cluster_1 | D | 13 | 12 | 36 | +++++++++++++CCAACAACCAA++++++++++++ | ++++++++++++TTGGTTGTTGG+++++++++++++ |
| uce_m103_II_3817345_3817353 | II_3817345_3817353 | cluster_1 | R | 20 | 7 | 36 | ++++++++++++++++++++GKAAGGGTG+++++++ | +++++++CACCCTTmC++++++++++++++++++++ |
| uce_m612_I_398777_398783 | I_398777_398783 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++GTGGTWG++++++++++++ | ++++++++++++CwACCAC+++++++++++++++++ |
| uce_m537_II_4383934_4383943 | II_4383934_4383943 | cluster_1 | R | 17 | 9 | 36 | +++++++++++++++++TAGGGTAGGT+++++++++ | +++++++++ACCTACCCTA+++++++++++++++++ |
| uce_m517_II_3720537_3720551 | II_3720537_3720551 | cluster_1 | D | 13 | 8 | 36 | +++++++++++++GCTGCTGGTAAGTAC++++++++ | ++++++++GTACTTACCAGCAGC+++++++++++++ |
| uce_m757_II_3720539_3720551 | II_3720539_3720551 | cluster_1 | R | 15 | 8 | 36 | +++++++++++++++TGCTGGTAAGTAC++++++++ | ++++++++GTACTTACCAGCA+++++++++++++++ |
| uce_m215_I_2251371_2251377 | I_2251371_2251377 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++TTTTGTT+++++++++++++ | +++++++++++++AACAAAA++++++++++++++++ |
| uce_m520_III_923437_923443 | III_923437_923443 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++TCTTGTT+++++++++++++ | +++++++++++++AACAAGA++++++++++++++++ |
| uce_m285_II_609806_609812 | II_609806_609812 | cluster_1 | D | 19 | 10 | 36 | +++++++++++++++++++ACCACCA++++++++++ | ++++++++++TGGTGGT+++++++++++++++++++ |
| uce_m497_II_4108105_4108111 | II_4108105_4108111 | cluster_1 | R | 19 | 10 | 36 | +++++++++++++++++++ACTACCA++++++++++ | ++++++++++TGGTAGT+++++++++++++++++++ |
| uce_m447_I_3084203_3084209 | I_3084203_3084209 | cluster_1 | R | 15 | 14 | 36 | +++++++++++++++TATAGTG++++++++++++++ | ++++++++++++++CACTATA+++++++++++++++ |
| uce_m455_II_2961315_2961321 | II_2961315_2961321 | cluster_1 | D | 15 | 14 | 36 | +++++++++++++++TATAATG++++++++++++++ | ++++++++++++++CATTATA+++++++++++++++ |
| uce_m363_I_5436641_5436647 | I_5436641_5436647 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++GAATTGT+++++++++++++ | +++++++++++++ACAAtTC++++++++++++++++ |
| uce_m700_I_4120832_4120839 | I_4120832_4120839 | cluster_1 | R | 16 | 12 | 36 | ++++++++++++++++GAATTGTG++++++++++++ | ++++++++++++CACAATTC++++++++++++++++ |
| uce_m607_III_1885571_1885578 | III_1885571_1885578 | cluster_1 | R | 16 | 12 | 36 | ++++++++++++++++TTTATATA++++++++++++ | ++++++++++++TATATAAA++++++++++++++++ |
| uce_m754_II_2169446_2169459 | II_2169446_2169459 | cluster_1 | R | 10 | 12 | 36 | ++++++++++CAAAAAACAGTCAC++++++++++++ | ++++++++++++GTGACTGTTTTTTG++++++++++ |
| uce_m376_I_3352183_3352189 | I_3352183_3352189 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++TYACCGA++++++++++++ | ++++++++++++TCGGTrA+++++++++++++++++ |
| uce_m619_I_396605_396612 | I_396605_396612 | cluster_1 | D | 17 | 11 | 36 | +++++++++++++++++TCACCGAA+++++++++++ | +++++++++++TTCGGTGA+++++++++++++++++ |
| uce_m254_I_2242468_2242474 | I_2242468_2242474 | cluster_1 | R | 15 | 14 | 36 | +++++++++++++++TTATGCA++++++++++++++ | ++++++++++++++TGcATAA+++++++++++++++ |
| uce_m419_I_1318826_1318832 | I_1318826_1318832 | cluster_1 | D | 15 | 14 | 36 | +++++++++++++++TTATACA++++++++++++++ | ++++++++++++++TGTATAA+++++++++++++++ |
| uce_m24_II_1595628_1595635 | II_1595628_1595635 | cluster_1 | D | 15 | 13 | 36 | +++++++++++++++TTCTAGCA+++++++++++++ | +++++++++++++TGCTAGAA+++++++++++++++ |
| uce_m484_III_2242771_2242779 | III_2242771_2242779 | cluster_1 | D | 15 | 12 | 36 | +++++++++++++++TTCTAGyAT++++++++++++ | ++++++++++++ATRCTAGAA+++++++++++++++ |
| uce_m18_III_581092_581099 | III_581092_581099 | cluster_1 | R | 14 | 14 | 36 | ++++++++++++++ATTTTTGC++++++++++++++ | ++++++++++++++GCAAAAAT++++++++++++++ |
| uce_m782_II_1835753_1835759 | II_1835753_1835759 | cluster_1 | D | 15 | 14 | 36 | +++++++++++++++TTTTTGC++++++++++++++ | ++++++++++++++GCAAAAA+++++++++++++++ |
| uce_m231_II_2645283_2645289 | II_2645283_2645289 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++TTTCTTT+++++++++++++ | +++++++++++++AAAGAAA++++++++++++++++ |
| uce_m319_I_3593324_3593331 | I_3593324_3593331 | cluster_1 | D | 16 | 12 | 36 | ++++++++++++++++TTTCTTTT++++++++++++ | ++++++++++++AAAAGAAA++++++++++++++++ |
| uce_m57_I_354641_354650 | I_354641_354650 | cluster_1 | D | 13 | 13 | 36 | +++++++++++++CTTTCTAGAA+++++++++++++ | +++++++++++++TTCTAGAAAG+++++++++++++ |
| uce_m483_I_4492698_4492707 | I_4492698_4492707 | cluster_1 | R | 13 | 13 | 36 | +++++++++++++TTTTCTAGAA+++++++++++++ | +++++++++++++TTCTAGAAAA+++++++++++++ |
| uce_m304_I_3682082_3682089 | I_3682082_3682089 | cluster_1 | R | 17 | 11 | 36 | +++++++++++++++++CTACCAAC+++++++++++ | +++++++++++GTTGGTAG+++++++++++++++++ |
| uce_m210_II_1822009_1822015 | II_1822009_1822015 | cluster_1 | R | 18 | 11 | 36 | ++++++++++++++++++CACAACA+++++++++++ | +++++++++++TGTTGTG++++++++++++++++++ |
| uce_m694_I_4117366_4117372 | I_4117366_4117372 | cluster_1 | D | 18 | 11 | 36 | ++++++++++++++++++CTCAACA+++++++++++ | +++++++++++TGTTGAG++++++++++++++++++ |
| uce_m89_II_1505230_1505236 | II_1505230_1505236 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++TTTyTTC++++++++++++ | ++++++++++++GAARAAA+++++++++++++++++ |
| uce_m451_I_1394944_1394950 | I_1394944_1394950 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++TTTATTC++++++++++++ | ++++++++++++GAATAAA+++++++++++++++++ |
| uce_m776_II_3632972_3632979 | II_3632972_3632979 | cluster_1 | R | 16 | 12 | 36 | ++++++++++++++++TATATATA++++++++++++ | ++++++++++++TATATATA++++++++++++++++ |
| uce_m133_III_1902483_1902491 | III_1902483_1902491 | cluster_1 | D | 14 | 13 | 36 | ++++++++++++++CAAGAACCA+++++++++++++ | +++++++++++++TGGTTCTTG++++++++++++++ |
| uce_m334_III_1732833_1732841 | III_1732833_1732841 | cluster_1 | D | 14 | 13 | 36 | ++++++++++++++CAACAACCA+++++++++++++ | +++++++++++++TGGTTGTTG++++++++++++++ |
| uce_m385_II_3133781_3133788 | II_3133781_3133788 | cluster_1 | D | 18 | 10 | 36 | ++++++++++++++++++CAACACCA++++++++++ | ++++++++++TGGTGTTG++++++++++++++++++ |
| uce_m715_III_618457_618465 | III_618457_618465 | cluster_1 | D | 17 | 10 | 36 | +++++++++++++++++ACwACACCA++++++++++ | ++++++++++TGGTGTWGT+++++++++++++++++ |
| uce_m3_I_4772052_4772058 | I_4772052_4772058 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++CCAGCCA+++++++++++++ | +++++++++++++TGGCTGG++++++++++++++++ |
| uce_m4_I_4772023_4772030 | I_4772023_4772030 | cluster_1 | D | 16 | 12 | 36 | ++++++++++++++++CCAGCCwC++++++++++++ | ++++++++++++GWGGCTGG++++++++++++++++ |
| uce_m337_III_1874602_1874608 | III_1874602_1874608 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++ACAGTCA+++++++++++++ | +++++++++++++TGACTGT++++++++++++++++ |
| uce_m675_III_1895119_1895128 | III_1895119_1895128 | cluster_1 | R | 16 | 10 | 36 | ++++++++++++++++TYAGGGTAGG++++++++++ | ++++++++++CCTACCCTrA++++++++++++++++ |
| uce_m401_III_2053734_2053740 | III_2053734_2053740 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++TTTGATT+++++++++++++ | +++++++++++++AATCAAA++++++++++++++++ |
| uce_m650_II_3543290_3543297 | II_3543290_3543297 | cluster_1 | D | 15 | 13 | 36 | +++++++++++++++TTTTGaTT+++++++++++++ | +++++++++++++AATCAAAA+++++++++++++++ |
| uce_m614_I_1457270_1457277 | I_1457270_1457277 | cluster_1 | R | 20 | 8 | 36 | ++++++++++++++++++++TGATGTCA++++++++ | ++++++++TGACATCA++++++++++++++++++++ |
| uce_m206_III_1582608_1582614 | III_1582608_1582614 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++TTTACCA+++++++++++++ | +++++++++++++TGGTAAA++++++++++++++++ |
| uce_m572_III_1676580_1676586 | III_1676580_1676586 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++TTsACCA+++++++++++++ | +++++++++++++TGGTSAA++++++++++++++++ |
| uce_m97_I_442347_442353 | I_442347_442353 | cluster_1 | R | 15 | 14 | 36 | +++++++++++++++TTTGGAT++++++++++++++ | ++++++++++++++ATCCAAA+++++++++++++++ |
| uce_m636_I_4417861_4417867 | I_4417861_4417867 | cluster_1 | D | 15 | 14 | 36 | +++++++++++++++TCTGGAT++++++++++++++ | ++++++++++++++ATCCAGA+++++++++++++++ |
| uce_m716_III_633778_633786 | III_633778_633786 | cluster_1 | D | 15 | 12 | 36 | +++++++++++++++AAyAGTCAC++++++++++++ | ++++++++++++GTGACTRTT+++++++++++++++ |
| uce_m78_I_923739_923746 | I_923739_923746 | cluster_1 | R | 15 | 13 | 36 | +++++++++++++++ATTTTATT+++++++++++++ | +++++++++++++AATAAAAT+++++++++++++++ |
| uce_m317_I_5281760_5281771 | I_5281760_5281771 | cluster_1 | D | 17 | 7 | 36 | +++++++++++++++++AGGGTTCGGGTT+++++++ | +++++++AACCCGAACCCT+++++++++++++++++ |
| uce_m366_I_247644_247651 | I_247644_247651 | cluster_1 | R | 16 | 12 | 36 | ++++++++++++++++TTTACTTA++++++++++++ | ++++++++++++TAAGTAAA++++++++++++++++ |
| uce_m467_III_1489493_1489499 | III_1489493_1489499 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++TTTgCTT+++++++++++++ | +++++++++++++AAGCAAA++++++++++++++++ |
| uce_m35_I_1598206_1598213 | I_1598206_1598213 | cluster_1 | D | 16 | 12 | 36 | ++++++++++++++++TTTATTAA++++++++++++ | ++++++++++++TTAATAAA++++++++++++++++ |
| uce_m488_I_838972_838978 | I_838972_838978 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++TTTATTA+++++++++++++ | +++++++++++++TAaTAAA++++++++++++++++ |
| uce_m600_II_4342775_4342787 | II_4342775_4342787 | cluster_1 | R | 12 | 11 | 36 | ++++++++++++TATGTTTATTTAC+++++++++++ | +++++++++++GTAAATAAACAtA++++++++++++ |
| uce_m33_I_4710586_4710592 | I_4710586_4710592 | cluster_1 | D | 20 | 9 | 36 | ++++++++++++++++++++GTAAGGG+++++++++ | +++++++++CCCTTAC++++++++++++++++++++ |
| uce_m372_I_4171127_4171133 | I_4171127_4171133 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++GTTACCT+++++++++++++ | +++++++++++++AGGTAAC++++++++++++++++ |
| uce_m719_I_4939517_4939523 | I_4939517_4939523 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++GGTACCT+++++++++++++ | +++++++++++++AGGTACC++++++++++++++++ |
| uce_m327_II_3567844_3567851 | II_3567844_3567851 | cluster_1 | R | 16 | 12 | 36 | ++++++++++++++++TTTGCCAC++++++++++++ | ++++++++++++GTGGCAAA++++++++++++++++ |
| uce_m341_I_5031832_5031838 | I_5031832_5031838 | cluster_1 | D | 15 | 14 | 36 | +++++++++++++++TTTTTCA++++++++++++++ | ++++++++++++++TGAAAAA+++++++++++++++ |
| uce_m774_I_1909317_1909323 | I_1909317_1909323 | cluster_1 | R | 15 | 14 | 36 | +++++++++++++++TTTTGCA++++++++++++++ | ++++++++++++++TGCAAAA+++++++++++++++ |
| uce_m402_III_2074653_2074659 | III_2074653_2074659 | cluster_1 | R | 19 | 10 | 36 | +++++++++++++++++++AGCAACA++++++++++ | ++++++++++TGTTGCT+++++++++++++++++++ |
| uce_m624_I_2585131_2585137 | I_2585131_2585137 | cluster_1 | D | 19 | 10 | 36 | +++++++++++++++++++ACCAACA++++++++++ | ++++++++++TGTTGGT+++++++++++++++++++ |
| uce_m391_II_3271600_3271607 | II_3271600_3271607 | cluster_1 | R | 15 | 13 | 36 | +++++++++++++++TAACGGTG+++++++++++++ | +++++++++++++CACCGTTA+++++++++++++++ |
| uce_m556_III_2146981_2146988 | III_2146981_2146988 | cluster_1 | D | 15 | 13 | 36 | +++++++++++++++TCACGGTG+++++++++++++ | +++++++++++++CACCGTGA+++++++++++++++ |
| uce_m48_II_2273305_2273311 | II_2273305_2273311 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CTTCCAC++++++++++++ | ++++++++++++GTGGAAG+++++++++++++++++ |
| uce_m150_II_1754984_1754991 | II_1754984_1754991 | cluster_1 | D | 16 | 12 | 36 | ++++++++++++++++ACCTCCAC++++++++++++ | ++++++++++++GTGGAGGT++++++++++++++++ |
| uce_m101_II_2107037_2107043 | II_2107037_2107043 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++TARTTTT+++++++++++++ | +++++++++++++AAAAyTA++++++++++++++++ |
| uce_m127_III_1407000_1407007 | III_1407000_1407007 | cluster_1 | R | 15 | 13 | 36 | +++++++++++++++TTAATTTT+++++++++++++ | +++++++++++++AAAATTAA+++++++++++++++ |
| uce_m42_II_2302235_2302245 | II_2302235_2302245 | cluster_1 | R | 14 | 11 | 36 | ++++++++++++++ATAGAATGCAA+++++++++++ | +++++++++++TTGCATTCTAT++++++++++++++ |
| uce_m660_II_2302235_2302243 | II_2302235_2302243 | cluster_1 | D | 14 | 13 | 36 | ++++++++++++++ATAGAATGC+++++++++++++ | +++++++++++++GCATTCTAT++++++++++++++ |
| uce_m224_III_696805_696811 | III_696805_696811 | cluster_1 | R | 18 | 11 | 36 | ++++++++++++++++++CAACCTA+++++++++++ | +++++++++++TaGGTTG++++++++++++++++++ |
| uce_m247_I_4515591_4515597 | I_4515591_4515597 | cluster_1 | R | 18 | 11 | 36 | ++++++++++++++++++CAACCCA+++++++++++ | +++++++++++TGGgTTG++++++++++++++++++ |
| uce_m228_III_697595_697600 | III_697595_697600 | cluster_1 | R | 19 | 10 | 36 | +++++++++++++++++++GTCACWA++++++++++ | ++++++++++TWGTGAC+++++++++++++++++++ |
| uce_m608_I_4033604_4033610 | I_4033604_4033610 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++AAGCCAC++++++++++++ | ++++++++++++GTGGCTT+++++++++++++++++ |
| uce_m792_II_2783941_2783947 | II_2783941_2783947 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++CAGCCAC++++++++++++ | ++++++++++++GTGGCTG+++++++++++++++++ |
| uce_m197_I_5395021_5395028 | I_5395021_5395028 | cluster_1 | R | 15 | 13 | 36 | +++++++++++++++TCATCAYA+++++++++++++ | +++++++++++++TrTGATGA+++++++++++++++ |
| uce_m581_III_956520_956526 | III_956520_956526 | cluster_1 | R | 15 | 14 | 36 | +++++++++++++++TCATCAT++++++++++++++ | ++++++++++++++ATGATGA+++++++++++++++ |
| uce_m438_III_1907536_1907543 | III_1907536_1907543 | cluster_1 | R | 16 | 12 | 36 | ++++++++++++++++TTTACTAA++++++++++++ | ++++++++++++TTAGTAAA++++++++++++++++ |
| uce_m46_II_3944261_3944267 | II_3944261_3944267 | cluster_1 | D | 15 | 14 | 36 | +++++++++++++++GTTTCAT++++++++++++++ | ++++++++++++++ATGAAAC+++++++++++++++ |
| uce_m223_III_2327606_2327612 | III_2327606_2327612 | cluster_1 | R | 15 | 14 | 36 | +++++++++++++++TTTTCAT++++++++++++++ | ++++++++++++++ATGAAAA+++++++++++++++ |
| uce_m90_III_990134_990140 | III_990134_990140 | cluster_1 | D | 18 | 11 | 36 | ++++++++++++++++++GGTGGTG+++++++++++ | +++++++++++CACCACC++++++++++++++++++ |
| uce_m296_I_553918_553925 | I_553918_553925 | cluster_1 | D | 16 | 12 | 36 | ++++++++++++++++TTGTTATG++++++++++++ | ++++++++++++CATAACAA++++++++++++++++ |
| uce_m626_I_2445900_2445907 | I_2445900_2445907 | cluster_1 | R | 16 | 12 | 36 | ++++++++++++++++TGGTTATG++++++++++++ | ++++++++++++CAtAACCA++++++++++++++++ |
| uce_m606_II_247591_247599 | II_247591_247599 | cluster_1 | R | 19 | 8 | 36 | +++++++++++++++++++AGGAAGGGT++++++++ | ++++++++ACCCTTCCT+++++++++++++++++++ |
| uce_m312_III_645478_645485 | III_645478_645485 | cluster_1 | D | 16 | 12 | 36 | ++++++++++++++++GTGAATGT++++++++++++ | ++++++++++++ACATTCAC++++++++++++++++ |
| uce_m557_III_2146640_2146646 | III_2146640_2146646 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++TGAAYGT++++++++++++ | ++++++++++++ACrTTCA+++++++++++++++++ |
| uce_m138_II_3383352_3383358 | II_3383352_3383358 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++CTGTCAC++++++++++++ | ++++++++++++GTGACAG+++++++++++++++++ |
| uce_m86_III_396583_396589 | III_396583_396589 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++TTCGTTT+++++++++++++ | +++++++++++++AAACGAA++++++++++++++++ |
| uce_m667_III_407281_407287 | III_407281_407287 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++TTGGTTT+++++++++++++ | +++++++++++++AAACCAA++++++++++++++++ |
| uce_m384_II_3203050_3203055 | II_3203050_3203055 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++ACGCGTA++++++++++++ | ++++++++++++TACGCGT+++++++++++++++++ |
| uce_m681_I_2712808_2712815 | I_2712808_2712815 | cluster_1 | R | 17 | 11 | 36 | +++++++++++++++++ACGCGTYT+++++++++++ | +++++++++++ArACGCGT+++++++++++++++++ |
| uce_m496_II_4066019_4066027 | II_4066019_4066027 | cluster_1 | R | 15 | 12 | 36 | +++++++++++++++TTTGTTTTG++++++++++++ | ++++++++++++CAAAACAAA+++++++++++++++ |
| uce_m597_I_5094434_5094442 | I_5094434_5094442 | cluster_1 | R | 15 | 12 | 36 | +++++++++++++++GWTGTTTTG++++++++++++ | ++++++++++++CAAAACAwC+++++++++++++++ |
| uce_m40_I_4438965_4438978 | I_4438965_4438978 | cluster_1 | R | 16 | 6 | 36 | ++++++++++++++++CAGGGTTAGGGTTT++++++ | ++++++AAACCCTAACCCTG++++++++++++++++ |
| uce_m109_II_1611812_1611818 | II_1611812_1611818 | cluster_1 | R | 15 | 14 | 36 | +++++++++++++++AGGTTTG++++++++++++++ | ++++++++++++++CAAACCT+++++++++++++++ |
| uce_m393_II_3227913_3227919 | II_3227913_3227919 | cluster_1 | D | 15 | 14 | 36 | +++++++++++++++AGGTCTG++++++++++++++ | ++++++++++++++CAGACCT+++++++++++++++ |
| uce_m314_III_662445_662453 | III_662445_662453 | cluster_1 | R | 18 | 9 | 36 | ++++++++++++++++++AGTCACATA+++++++++ | +++++++++TaTGTGACT++++++++++++++++++ |
| uce_m495_II_1034403_1034410 | II_1034403_1034410 | cluster_1 | D | 17 | 11 | 36 | +++++++++++++++++TTGTTTrT+++++++++++ | +++++++++++AYAAACAA+++++++++++++++++ |
| uce_m179_II_4441854_4441860 | II_4441854_4441860 | cluster_1 | R | 14 | 15 | 36 | ++++++++++++++AAAGAAT+++++++++++++++ | +++++++++++++++ATTCTTT++++++++++++++ |
| uce_m183_I_3504896_3504903 | I_3504896_3504903 | cluster_1 | D | 14 | 14 | 36 | ++++++++++++++ArAGAATG++++++++++++++ | ++++++++++++++CATTCTYT++++++++++++++ |
| uce_m39_II_4151833_4151839 | II_4151833_4151839 | cluster_1 | D | 15 | 14 | 36 | +++++++++++++++AAACgGT++++++++++++++ | ++++++++++++++ACCGTTT+++++++++++++++ |
| uce_m126_III_1407138_1407146 | III_1407138_1407146 | cluster_1 | D | 16 | 11 | 36 | ++++++++++++++++GwCGCGTCG+++++++++++ | +++++++++++CGACGCGWC++++++++++++++++ |
| uce_m405_II_1187539_1187545 | II_1187539_1187545 | cluster_1 | D | 18 | 11 | 36 | ++++++++++++++++++CACCACA+++++++++++ | +++++++++++TGTGGTG++++++++++++++++++ |
| uce_m26_I_322327_322333 | I_322327_322333 | cluster_1 | D | 18 | 11 | 36 | ++++++++++++++++++AGTTTaC+++++++++++ | +++++++++++GTAAACT++++++++++++++++++ |
| uce_m170_I_2880142_2880148 | I_2880142_2880148 | cluster_1 | D | 18 | 11 | 36 | ++++++++++++++++++AGTGTAC+++++++++++ | +++++++++++GTACACT++++++++++++++++++ |
| uce_m295_I_554041_554047 | I_554041_554047 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++TTTCATG+++++++++++++ | +++++++++++++CATGAAA++++++++++++++++ |
| uce_m518_III_928933_928939 | III_928933_928939 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++TTwTATG+++++++++++++ | +++++++++++++CATAWAA++++++++++++++++ |
| uce_m407_I_4466519_4466527 | I_4466519_4466527 | cluster_1 | R | 19 | 8 | 36 | +++++++++++++++++++ATGACGTAA++++++++ | ++++++++TTACGTCAT+++++++++++++++++++ |
| uce_m456_II_3074818_3074824 | II_3074818_3074824 | cluster_1 | D | 19 | 10 | 36 | +++++++++++++++++++ATGACGT++++++++++ | ++++++++++ACGTCAT+++++++++++++++++++ |
| uce_m209_II_1832748_1832754 | II_1832748_1832754 | cluster_1 | D | 18 | 11 | 36 | ++++++++++++++++++AACCACC+++++++++++ | +++++++++++GGTGGTT++++++++++++++++++ |
| uce_m521_III_914823_914829 | III_914823_914829 | cluster_1 | D | 18 | 11 | 36 | ++++++++++++++++++ACCCACC+++++++++++ | +++++++++++GGTGGGT++++++++++++++++++ |
| uce_m177_II_4441817_4441823 | II_4441817_4441823 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++TTTCATT+++++++++++++ | +++++++++++++AATGAAA++++++++++++++++ |
| uce_m639_II_3765465_3765471 | II_3765465_3765471 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CTATATA++++++++++++ | ++++++++++++TATATAG+++++++++++++++++ |
| uce_m303_I_3694941_3694947 | I_3694941_3694947 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++ATaTTTC++++++++++++ | ++++++++++++GAAATAT+++++++++++++++++ |
| uce_m548_I_1555327_1555334 | I_1555327_1555334 | cluster_1 | R | 16 | 12 | 36 | ++++++++++++++++TATTTTTC++++++++++++ | ++++++++++++GAAAAATA++++++++++++++++ |
| uce_m406_I_4452512_4452518 | I_4452512_4452518 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++TTGAAGT++++++++++++ | ++++++++++++ACTTCAA+++++++++++++++++ |
| uce_m527_III_736838_736844 | III_736838_736844 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++TcAAAGT++++++++++++ | ++++++++++++ACTTTGA+++++++++++++++++ |
| uce_m709_I_3678151_3678159 | I_3678151_3678159 | cluster_1 | D | 19 | 8 | 36 | +++++++++++++++++++ACCACAACG++++++++ | ++++++++CGTTGTGGT+++++++++++++++++++ |
| uce_m404_I_3202999_3203005 | I_3202999_3203005 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++TTTTGTG+++++++++++++ | +++++++++++++CACAAAA++++++++++++++++ |
| uce_m794_II_4070749_4070756 | II_4070749_4070756 | cluster_1 | D | 15 | 13 | 36 | +++++++++++++++ATTTTyTG+++++++++++++ | +++++++++++++CARAAAAT+++++++++++++++ |
| uce_m596_I_5160821_5160828 | I_5160821_5160828 | cluster_1 | D | 18 | 10 | 36 | ++++++++++++++++++AGTCACGA++++++++++ | ++++++++++TCGTGACT++++++++++++++++++ |
| uce_m390_II_3271585_3271591 | II_3271585_3271591 | cluster_1 | R | 15 | 14 | 36 | +++++++++++++++GTTTTGG++++++++++++++ | ++++++++++++++CCAAAAC+++++++++++++++ |
| uce_m399_III_2046579_2046585 | III_2046579_2046585 | cluster_1 | R | 15 | 14 | 36 | +++++++++++++++GTTTTGT++++++++++++++ | ++++++++++++++AcAAAAC+++++++++++++++ |
| uce_m41_I_4448710_4448716 | I_4448710_4448716 | cluster_1 | R | 14 | 15 | 36 | ++++++++++++++GATATCA+++++++++++++++ | +++++++++++++++TgATATC++++++++++++++ |
| uce_m68_II_2740623_2740629 | II_2740623_2740629 | cluster_1 | R | 14 | 15 | 36 | ++++++++++++++GTTATCA+++++++++++++++ | +++++++++++++++TGATAAC++++++++++++++ |
| uce_m13_II_2516311_2516318 | II_2516311_2516318 | cluster_1 | D | 14 | 14 | 36 | ++++++++++++++TTTTTGAT++++++++++++++ | ++++++++++++++ATCAAAAA++++++++++++++ |
| uce_m276_I_3407187_3407198 | I_3407187_3407198 | cluster_1 | D | 12 | 12 | 36 | ++++++++++++AGTGCCAACCAC++++++++++++ | ++++++++++++GTGGTTGGCACT++++++++++++ |
| uce_m445_II_1452764_1452775 | II_1452764_1452775 | cluster_1 | D | 12 | 12 | 36 | ++++++++++++AGAACCAACCAC++++++++++++ | ++++++++++++GTGGTTGGTTCT++++++++++++ |
| uce_m30_II_3661249_3661257 | II_3661249_3661257 | cluster_1 | D | 15 | 12 | 36 | +++++++++++++++GGTTGCTAA++++++++++++ | ++++++++++++TTAGCAACC+++++++++++++++ |
| uce_m444_III_1038483_1038489 | III_1038483_1038489 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++TTGCtAA++++++++++++ | ++++++++++++TTAGCAA+++++++++++++++++ |
| uce_m302_I_3696239_3696245 | I_3696239_3696245 | cluster_1 | R | 18 | 11 | 36 | ++++++++++++++++++ARTAACA+++++++++++ | +++++++++++TGTTAyT++++++++++++++++++ |
| uce_m92_III_985922_985928 | III_985922_985928 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++CAGTCCC++++++++++++ | ++++++++++++GGGACTG+++++++++++++++++ |
| uce_m82_I_905324_905330 | I_905324_905330 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++ATGAATG+++++++++++++ | +++++++++++++CaTTCAT++++++++++++++++ |
| uce_m300_I_2540066_2540072 | I_2540066_2540072 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++ATGGATG+++++++++++++ | +++++++++++++CATCCAT++++++++++++++++ |
| uce_m235_I_4116899_4116905 | I_4116899_4116905 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++TCTTATT+++++++++++++ | +++++++++++++AATAAGA++++++++++++++++ |
| uce_m424_III_1688495_1688501 | III_1688495_1688501 | cluster_1 | D | 14 | 15 | 36 | ++++++++++++++AATGGAT+++++++++++++++ | +++++++++++++++ATCCATT++++++++++++++ |
| uce_m550_III_2135724_2135732 | III_2135724_2135732 | cluster_1 | R | 12 | 15 | 36 | ++++++++++++ACAATGGAT+++++++++++++++ | +++++++++++++++ATCCATTGT++++++++++++ |
| uce_m53_I_3528064_3528070 | I_3528064_3528070 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++ATAcTCT+++++++++++++ | +++++++++++++AGAGTAT++++++++++++++++ |
| uce_m472_III_1258237_1258243 | III_1258237_1258243 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++AAATTCT+++++++++++++ | +++++++++++++AGAaTTT++++++++++++++++ |
| uce_m629_I_2451994_2452000 | I_2451994_2452000 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++ATATAGA++++++++++++ | ++++++++++++TCTATAT+++++++++++++++++ |
| uce_m307_III_1775961_1775970 | III_1775961_1775970 | cluster_1 | R | 18 | 8 | 36 | ++++++++++++++++++AGTCACGTGA++++++++ | ++++++++TCACGTGACT++++++++++++++++++ |
| uce_m508_I_3930126_3930133 | I_3930126_3930133 | cluster_1 | R | 19 | 9 | 36 | +++++++++++++++++++GTCACRTG+++++++++ | +++++++++CAyGTGAC+++++++++++++++++++ |
| uce_m91_III_985868_985876 | III_985868_985876 | cluster_1 | R | 15 | 12 | 36 | +++++++++++++++ACCAMACAC++++++++++++ | ++++++++++++GTGTkTGGT+++++++++++++++ |
| uce_m670_III_1358483_1358491 | III_1358483_1358491 | cluster_1 | D | 16 | 11 | 36 | ++++++++++++++++CCAAACACC+++++++++++ | +++++++++++GGTGTTTGG++++++++++++++++ |
| uce_m420_I_1333108_1333114 | I_1333108_1333114 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++ATTyCTT+++++++++++++ | +++++++++++++AAGRAAT++++++++++++++++ |
| uce_m621_II_1292676_1292682 | II_1292676_1292682 | cluster_1 | D | 15 | 14 | 36 | +++++++++++++++CAAAwTT++++++++++++++ | ++++++++++++++AAWTTTG+++++++++++++++ |
| uce_m202_I_3914227_3914236 | I_3914227_3914236 | cluster_1 | D | 17 | 9 | 36 | +++++++++++++++++AGGGTTmGGG+++++++++ | +++++++++CCCKAACCCT+++++++++++++++++ |
| uce_m490_III_144538_144545 | III_144538_144545 | cluster_1 | R | 19 | 9 | 36 | +++++++++++++++++++GGKTAGGG+++++++++ | +++++++++CCCTAmCC+++++++++++++++++++ |
| uce_m474_III_1260581_1260588 | III_1260581_1260588 | cluster_1 | D | 14 | 14 | 36 | ++++++++++++++ArCATCAT++++++++++++++ | ++++++++++++++ATGATGYT++++++++++++++ |
| uce_m540_I_5072798_5072805 | I_5072798_5072805 | cluster_1 | R | 15 | 13 | 36 | +++++++++++++++ACATCATC+++++++++++++ | +++++++++++++GATGATGT+++++++++++++++ |
| uce_m535_I_4950411_4950418 | I_4950411_4950418 | cluster_1 | D | 16 | 12 | 36 | ++++++++++++++++ATGkTTTA++++++++++++ | ++++++++++++TAAAMCAT++++++++++++++++ |
| uce_m664_III_96288_96295 | III_96288_96295 | cluster_1 | D | 15 | 13 | 36 | +++++++++++++++AATGGTTT+++++++++++++ | +++++++++++++AAACCATT+++++++++++++++ |
| uce_m768_II_2233894_2233900 | II_2233894_2233900 | cluster_1 | R | 14 | 15 | 36 | ++++++++++++++ATAGAAT+++++++++++++++ | +++++++++++++++ATTCTAT++++++++++++++ |
| uce_m492_III_1460159_1460165 | III_1460159_1460165 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CAACCAG++++++++++++ | ++++++++++++CTGGTTG+++++++++++++++++ |
| uce_m542_III_543182_543188 | III_543182_543188 | cluster_1 | D | 18 | 11 | 36 | ++++++++++++++++++AACCAGA+++++++++++ | +++++++++++TCTGGTT++++++++++++++++++ |
| uce_m188_I_1688261_1688267 | I_1688261_1688267 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++AAGGGAG++++++++++++ | ++++++++++++CtCCCTT+++++++++++++++++ |
| uce_m454_I_3200488_3200494 | I_3200488_3200494 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++AAGGTAG++++++++++++ | ++++++++++++CTACCTT+++++++++++++++++ |
| uce_m458_II_4264714_4264720 | II_4264714_4264720 | cluster_1 | D | 18 | 11 | 36 | ++++++++++++++++++TrCCAAC+++++++++++ | +++++++++++GTTGGYA++++++++++++++++++ |
| uce_m428_I_2003612_2003620 | I_2003612_2003620 | cluster_1 | D | 14 | 13 | 36 | ++++++++++++++CTTCTTCCA+++++++++++++ | +++++++++++++TGGAAGAAG++++++++++++++ |
| uce_m749_I_3992018_3992026 | I_3992018_3992026 | cluster_1 | D | 14 | 13 | 36 | ++++++++++++++CTTTGTCCA+++++++++++++ | +++++++++++++TGGACAAAG++++++++++++++ |
| uce_m561_I_1934976_1934987 | I_1934976_1934987 | cluster_1 | R | 16 | 8 | 36 | ++++++++++++++++GTCGCGACGCGT++++++++ | ++++++++ACGCGTCGCGAC++++++++++++++++ |
| uce_m671_II_3743232_3743238 | II_3743232_3743238 | cluster_1 | D | 15 | 14 | 36 | +++++++++++++++TTTCTGC++++++++++++++ | ++++++++++++++GCAGAAA+++++++++++++++ |
| uce_m324_II_3413528_3413534 | II_3413528_3413534 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++TTyTTGT++++++++++++ | ++++++++++++ACAARAA+++++++++++++++++ |
| uce_m755_II_3697415_3697421 | II_3697415_3697421 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++TtCATGT++++++++++++ | ++++++++++++ACATGAA+++++++++++++++++ |
| uce_m711_II_313912_313919 | II_313912_313919 | cluster_1 | R | 15 | 13 | 36 | +++++++++++++++GTTTTGCG+++++++++++++ | +++++++++++++CGCAAAAC+++++++++++++++ |
| uce_m100_II_3980009_3980017 | II_3980009_3980017 | cluster_1 | D | 17 | 10 | 36 | +++++++++++++++++AAGGGTAAG++++++++++ | ++++++++++CTTACCCTT+++++++++++++++++ |
| uce_m331_I_2078814_2078821 | I_2078814_2078821 | cluster_1 | R | 20 | 8 | 36 | ++++++++++++++++++++ARACGTCA++++++++ | ++++++++TGACGTyT++++++++++++++++++++ |
| uce_m38_II_4151711_4151717 | II_4151711_4151717 | cluster_1 | D | 18 | 11 | 36 | ++++++++++++++++++TAGTAaG+++++++++++ | +++++++++++CTTACTA++++++++++++++++++ |
| uce_m248_I_4546506_4546512 | I_4546506_4546512 | cluster_1 | D | 18 | 11 | 36 | ++++++++++++++++++TTGTAcG+++++++++++ | +++++++++++CGTACAA++++++++++++++++++ |
| uce_m169_I_2880177_2880186 | I_2880177_2880186 | cluster_1 | R | 15 | 11 | 36 | +++++++++++++++TCATCATCRA+++++++++++ | +++++++++++TyGATGATGA+++++++++++++++ |
| uce_m695_I_4076917_4076924 | I_4076917_4076924 | cluster_1 | D | 16 | 11 | 36 | ++++++++++++++++CATCAACAA+++++++++++ | +++++++++++TTGTTGATG++++++++++++++++ |
| uce_m325_II_3413229_3413235 | II_3413229_3413235 | cluster_1 | R | 15 | 14 | 36 | +++++++++++++++GAAAGCC++++++++++++++ | ++++++++++++++GGCTTTC+++++++++++++++ |
| uce_m439_III_1907428_1907434 | III_1907428_1907434 | cluster_1 | R | 15 | 14 | 36 | +++++++++++++++GACAACC++++++++++++++ | ++++++++++++++GGTTGTC+++++++++++++++ |
| uce_m603_III_72634_72641 | III_72634_72641 | cluster_1 | D | 16 | 12 | 36 | ++++++++++++++++TATGTGTC++++++++++++ | ++++++++++++GACACATA++++++++++++++++ |
| uce_m727_II_1530601_1530607 | II_1530601_1530607 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++TATGTAT+++++++++++++ | +++++++++++++ATACATA++++++++++++++++ |
| uce_m291_II_997363_997369 | II_997363_997369 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++AAAcTAT+++++++++++++ | +++++++++++++ATAGTTT++++++++++++++++ |
| uce_m342_I_5031850_5031864 | I_5031850_5031864 | cluster_1 | D | 17 | 4 | 36 | +++++++++++++++++TCTGTTGTCCCTATC++++ | ++++GATAGGGACAACAGA+++++++++++++++++ |
| uce_m582_III_956499_956513 | III_956499_956513 | cluster_1 | D | 17 | 4 | 36 | +++++++++++++++++TGTGTCGCCCCTATC++++ | ++++GATAGGGGCGACACA+++++++++++++++++ |
| uce_m196_I_5403012_5403019 | I_5403012_5403019 | cluster_1 | D | 16 | 12 | 36 | ++++++++++++++++AACGTGTA++++++++++++ | ++++++++++++TACACGTT++++++++++++++++ |
| uce_m204_I_3894903_3894911 | I_3894903_3894911 | cluster_1 | R | 16 | 11 | 36 | ++++++++++++++++AACGTTTAA+++++++++++ | +++++++++++TTAAACGTT++++++++++++++++ |
| uce_m217_III_384916_384924 | III_384916_384924 | cluster_1 | D | 15 | 12 | 36 | +++++++++++++++TTATTTATA++++++++++++ | ++++++++++++TATAAATAA+++++++++++++++ |
| uce_m549_II_2582259_2582266 | II_2582259_2582266 | cluster_1 | D | 15 | 13 | 36 | +++++++++++++++TTATTTAA+++++++++++++ | +++++++++++++TTAAATAA+++++++++++++++ |
| uce_m267_I_3284897_3284904 | I_3284897_3284904 | cluster_1 | R | 15 | 13 | 36 | +++++++++++++++CTTGTTTT+++++++++++++ | +++++++++++++AAAaCAAG+++++++++++++++ |
| uce_m358_II_2828026_2828033 | II_2828026_2828033 | cluster_1 | R | 15 | 13 | 36 | +++++++++++++++GTKGTTTT+++++++++++++ | +++++++++++++AAAACmAC+++++++++++++++ |
| uce_m299_I_2539912_2539918 | I_2539912_2539918 | cluster_1 | D | 15 | 14 | 36 | +++++++++++++++GTAyCAT++++++++++++++ | ++++++++++++++ATGRTAC+++++++++++++++ |
| uce_m499_I_2189557_2189563 | I_2189557_2189563 | cluster_1 | D | 15 | 14 | 36 | +++++++++++++++GTGTCAT++++++++++++++ | ++++++++++++++ATGACAC+++++++++++++++ |
| uce_m394_II_3227922_3227929 | II_3227922_3227929 | cluster_1 | D | 16 | 12 | 36 | ++++++++++++++++GGYGGATT++++++++++++ | ++++++++++++AATCCRCC++++++++++++++++ |
| uce_m462_III_1482158_1482165 | III_1482158_1482165 | cluster_1 | R | 16 | 12 | 36 | ++++++++++++++++GGCGTGTT++++++++++++ | ++++++++++++AAcACGCC++++++++++++++++ |
| uce_m791_III_629456_629462 | III_629456_629462 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++AAATYTC+++++++++++++ | +++++++++++++GArATTT++++++++++++++++ |
| uce_m381_II_3175453_3175459 | II_3175453_3175459 | cluster_1 | D | 15 | 14 | 36 | +++++++++++++++AGAyATG++++++++++++++ | ++++++++++++++CATRTCT+++++++++++++++ |
| uce_m674_III_2106454_2106462 | III_2106454_2106462 | cluster_1 | D | 13 | 14 | 36 | +++++++++++++ATAGACATG++++++++++++++ | ++++++++++++++CATGTCTAT+++++++++++++ |
| uce_m356_II_2836869_2836875 | II_2836869_2836875 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++TTTCMAC++++++++++++ | ++++++++++++GTkGAAA+++++++++++++++++ |
| uce_m545_I_1542274_1542280 | I_1542274_1542280 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++TtACCAC++++++++++++ | ++++++++++++GTGGTAA+++++++++++++++++ |
| uce_m525_III_796549_796555 | III_796549_796555 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++GTGTTTA++++++++++++ | ++++++++++++TAAACAC+++++++++++++++++ |
| uce_m225_III_696817_696825 | III_696817_696825 | cluster_1 | R | 15 | 12 | 36 | +++++++++++++++GGTCAATTT++++++++++++ | ++++++++++++AAATTGACC+++++++++++++++ |
| uce_m593_I_4334086_4334093 | I_4334086_4334093 | cluster_1 | R | 16 | 12 | 36 | ++++++++++++++++GTCAAGTT++++++++++++ | ++++++++++++AACTTGAC++++++++++++++++ |
| uce_m605_III_2029097_2029105 | III_2029097_2029105 | cluster_1 | D | 14 | 13 | 36 | ++++++++++++++CAyAAACCA+++++++++++++ | +++++++++++++TGGTTTRTG++++++++++++++ |
| uce_m489_I_2228191_2228198 | I_2228191_2228198 | cluster_1 | D | 18 | 10 | 36 | ++++++++++++++++++CtACAACA++++++++++ | ++++++++++TGTTGTAG++++++++++++++++++ |
| uce_m63_I_2296739_2296750 | I_2296739_2296750 | cluster_1 | R | 16 | 8 | 36 | ++++++++++++++++ACCACCAACACT++++++++ | ++++++++AGTGTTGGTGGT++++++++++++++++ |
| uce_m662_II_2280533_2280542 | II_2280533_2280542 | cluster_1 | D | 16 | 10 | 36 | ++++++++++++++++ACCACCATCA++++++++++ | ++++++++++TGATGGTGGT++++++++++++++++ |
| uce_m137_II_2886095_2886101 | II_2886095_2886101 | cluster_1 | D | 18 | 11 | 36 | ++++++++++++++++++CACACCA+++++++++++ | +++++++++++TGGTGTG++++++++++++++++++ |
| uce_m789_II_593341_593347 | II_593341_593347 | cluster_1 | D | 19 | 10 | 36 | +++++++++++++++++++ACCATCA++++++++++ | ++++++++++TGATGGT+++++++++++++++++++ |
| uce_m335_III_1879104_1879112 | III_1879104_1879112 | cluster_1 | D | 16 | 11 | 36 | ++++++++++++++++ACTACCAcC+++++++++++ | +++++++++++GGTGGTAGT++++++++++++++++ |
| uce_m505_I_2362073_2362079 | I_2362073_2362079 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++TTGTrGA++++++++++++ | ++++++++++++TCYACAA+++++++++++++++++ |
| uce_m59_II_2365255_2365264 | II_2365255_2365264 | cluster_1 | D | 13 | 13 | 36 | +++++++++++++GAGGTTGTAA+++++++++++++ | +++++++++++++TTACAACCTC+++++++++++++ |
| uce_m152_II_1755022_1755033 | II_1755022_1755033 | cluster_1 | D | 13 | 11 | 36 | +++++++++++++GAGGTTGCAAAT+++++++++++ | +++++++++++ATTTGCAACCTC+++++++++++++ |
| uce_m569_I_236434_236444 | I_236434_236444 | cluster_1 | R | 16 | 9 | 36 | ++++++++++++++++TTTGTTTAYGG+++++++++ | +++++++++CCrTAAACAAA++++++++++++++++ |
| uce_m704_I_3360700_3360705 | I_3360700_3360705 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++AMTTGGT++++++++++++ | ++++++++++++ACCAAKT+++++++++++++++++ |
| uce_m218_I_3095855_3095861 | I_3095855_3095861 | cluster_1 | D | 15 | 14 | 36 | +++++++++++++++TTATCAT++++++++++++++ | ++++++++++++++ATGATAA+++++++++++++++ |
| uce_m387_II_3271963_3271969 | II_3271963_3271969 | cluster_1 | R | 15 | 14 | 36 | +++++++++++++++TTCTTCA++++++++++++++ | ++++++++++++++TGAAGAA+++++++++++++++ |
| uce_m20_III_569738_569745 | III_569738_569745 | cluster_1 | D | 16 | 12 | 36 | ++++++++++++++++CGTATGTC++++++++++++ | ++++++++++++GACATACG++++++++++++++++ |
| uce_m322_III_345675_345684 | III_345675_345684 | cluster_1 | D | 14 | 12 | 36 | ++++++++++++++TtTTTTTTGG++++++++++++ | ++++++++++++CCAAAAAAAA++++++++++++++ |
| uce_m151_II_1755005_1755011 | II_1755005_1755011 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++TCTCAGT++++++++++++ | ++++++++++++ACTGAGA+++++++++++++++++ |
| uce_m369_I_3024500_3024507 | I_3024500_3024507 | cluster_1 | R | 16 | 12 | 36 | ++++++++++++++++TTTATARC++++++++++++ | ++++++++++++GyTATAAA++++++++++++++++ |
| uce_m759_III_798905_798913 | III_798905_798913 | cluster_1 | R | 15 | 12 | 36 | +++++++++++++++TTTTATAGT++++++++++++ | ++++++++++++ACTATAAAA+++++++++++++++ |
| uce_m308_III_1776009_1776015 | III_1776009_1776015 | cluster_1 | R | 20 | 9 | 36 | ++++++++++++++++++++GCGAAGG+++++++++ | +++++++++CCTTCGC++++++++++++++++++++ |
| uce_m310_III_632888_632894 | III_632888_632894 | cluster_1 | D | 20 | 9 | 36 | ++++++++++++++++++++GTTAAGG+++++++++ | +++++++++CCTTAAC++++++++++++++++++++ |
| uce_m88_III_413475_413481 | III_413475_413481 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++TTGATTA+++++++++++++ | +++++++++++++TAATCAA++++++++++++++++ |
| uce_m122_III_1407332_1407339 | III_1407332_1407339 | cluster_1 | D | 16 | 12 | 36 | ++++++++++++++++TCTyTGCA++++++++++++ | ++++++++++++TGCARAGA++++++++++++++++ |
| uce_m143_I_4890490_4890496 | I_4890490_4890496 | cluster_1 | D | 16 | 12 | 36 | ++++++++++++++++TCTATGTA++++++++++++ | ++++++++++++TACATAGA++++++++++++++++ |
| uce_m175_II_4487433_4487443 | II_4487433_4487443 | cluster_1 | D | 12 | 13 | 36 | ++++++++++++TTAACCAAACT+++++++++++++ | +++++++++++++AGTTTGGTTAA++++++++++++ |
| uce_m678_II_1776274_1776281 | II_1776274_1776281 | cluster_1 | D | 15 | 13 | 36 | +++++++++++++++TTTTTCCG+++++++++++++ | +++++++++++++CGGAAAAA+++++++++++++++ |
| uce_m780_II_4444169_4444175 | II_4444169_4444175 | cluster_1 | R | 15 | 14 | 36 | +++++++++++++++CTTTTCC++++++++++++++ | ++++++++++++++GGAAAAG+++++++++++++++ |
| uce_m229_II_2644587_2644593 | II_2644587_2644593 | cluster_1 | R | 15 | 14 | 36 | +++++++++++++++TATAATA++++++++++++++ | ++++++++++++++TATTaTA+++++++++++++++ |
| uce_m163_I_2802180_2802187 | I_2802180_2802187 | cluster_1 | D | 16 | 12 | 36 | ++++++++++++++++CATCATTC++++++++++++ | ++++++++++++GAATGATG++++++++++++++++ |
| uce_m239_I_4098388_4098394 | I_4098388_4098394 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++ATCATTT++++++++++++ | ++++++++++++AAATGAT+++++++++++++++++ |
| uce_m610_II_1332822_1332829 | II_1332822_1332829 | cluster_1 | R | 16 | 12 | 36 | ++++++++++++++++TATATTTA++++++++++++ | ++++++++++++TAAATATA++++++++++++++++ |
| uce_m469_III_1488971_1488978 | III_1488971_1488978 | cluster_1 | R | 15 | 13 | 36 | +++++++++++++++CTTTATTT+++++++++++++ | +++++++++++++AAATAAAG+++++++++++++++ |
| uce_m275_I_3407146_3407153 | I_3407146_3407153 | cluster_1 | D | 15 | 13 | 36 | +++++++++++++++AGCAGTCC+++++++++++++ | +++++++++++++GGACTGCT+++++++++++++++ |
| uce_m793_II_1073808_1073814 | II_1073808_1073814 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++GCAGCCC+++++++++++++ | +++++++++++++GGGCTGC++++++++++++++++ |
| uce_m368_I_3028338_3028344 | I_3028338_3028344 | cluster_1 | D | 15 | 14 | 36 | +++++++++++++++AAGAATT++++++++++++++ | ++++++++++++++AATTCTT+++++++++++++++ |
| uce_m748_I_3986142_3986149 | I_3986142_3986149 | cluster_1 | D | 15 | 13 | 36 | +++++++++++++++ACGAATTT+++++++++++++ | +++++++++++++AAATTCGT+++++++++++++++ |
| uce_m45_II_2289314_2289320 | II_2289314_2289320 | cluster_1 | D | 18 | 11 | 36 | ++++++++++++++++++CAACAAT+++++++++++ | +++++++++++ATTGTTG++++++++++++++++++ |
| uce_m565_II_754317_754324 | II_754317_754324 | cluster_1 | D | 17 | 11 | 36 | +++++++++++++++++ACAACAAA+++++++++++ | +++++++++++TTTGTTGT+++++++++++++++++ |
| uce_m652_I_3423537_3423543 | I_3423537_3423543 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++AACAGCA+++++++++++++ | +++++++++++++TGCTGTT++++++++++++++++ |
| uce_m729_II_3175202_3175209 | II_3175202_3175209 | cluster_1 | R | 15 | 13 | 36 | +++++++++++++++GAACAGCT+++++++++++++ | +++++++++++++AGCTGTTC+++++++++++++++ |
| uce_m232_III_147549_147556 | III_147549_147556 | cluster_1 | R | 14 | 14 | 36 | ++++++++++++++GATGTTGG++++++++++++++ | ++++++++++++++CCAACATC++++++++++++++ |
| uce_m371_I_4071290_4071297 | I_4071290_4071297 | cluster_1 | R | 14 | 14 | 36 | ++++++++++++++GATATCGG++++++++++++++ | ++++++++++++++CCGATATC++++++++++++++ |
| uce_m476_III_1603106_1603113 | III_1603106_1603113 | cluster_1 | R | 17 | 11 | 36 | +++++++++++++++++CCGCGGYA+++++++++++ | +++++++++++TrCCGCGG+++++++++++++++++ |
| uce_m576_I_4250413_4250419 | I_4250413_4250419 | cluster_1 | R | 18 | 11 | 36 | ++++++++++++++++++CGCGTCA+++++++++++ | +++++++++++TGACGCG++++++++++++++++++ |
| uce_m770_II_2233960_2233967 | II_2233960_2233967 | cluster_1 | D | 13 | 15 | 36 | +++++++++++++AAATGTAT+++++++++++++++ | +++++++++++++++ATACATTT+++++++++++++ |
| uce_m336_III_1874580_1874588 | III_1874580_1874588 | cluster_1 | D | 14 | 13 | 36 | ++++++++++++++AGTTTTGaT+++++++++++++ | +++++++++++++ATCAAAACT++++++++++++++ |
| uce_m149_II_1764296_1764305 | II_1764296_1764305 | cluster_1 | D | 13 | 13 | 36 | +++++++++++++AGATTTTCAA+++++++++++++ | +++++++++++++TTGAAAATCT+++++++++++++ |
| uce_m429_I_1961540_1961546 | I_1961540_1961546 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++TTTYCAA+++++++++++++ | +++++++++++++TTGrAAA++++++++++++++++ |
| uce_m181_I_4223703_4223709 | I_4223703_4223709 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++TCTCCCA+++++++++++++ | +++++++++++++TGGGAGA++++++++++++++++ |
| uce_m270_II_1361674_1361680 | II_1361674_1361680 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++GAGTTTT+++++++++++++ | +++++++++++++AAAACTC++++++++++++++++ |
| uce_m289_II_992787_992793 | II_992787_992793 | cluster_1 | R | 20 | 9 | 36 | ++++++++++++++++++++GGAAGGA+++++++++ | +++++++++TCCTTCC++++++++++++++++++++ |
| uce_m788_I_3261724_3261730 | I_3261724_3261730 | cluster_1 | D | 20 | 9 | 36 | ++++++++++++++++++++GGyAAGA+++++++++ | +++++++++TCTTRCC++++++++++++++++++++ |
| uce_m192_I_1725295_1725301 | I_1725295_1725301 | cluster_1 | D | 19 | 10 | 36 | +++++++++++++++++++GTGCCCT++++++++++ | ++++++++++AGGGCAC+++++++++++++++++++ |
| uce_m425_III_1700163_1700169 | III_1700163_1700169 | cluster_1 | D | 19 | 10 | 36 | +++++++++++++++++++GTGAGCT++++++++++ | ++++++++++AGCTCAC+++++++++++++++++++ |
| uce_m413_I_1266084_1266091 | I_1266084_1266091 | cluster_1 | R | 17 | 11 | 36 | +++++++++++++++++TTCCCACG+++++++++++ | +++++++++++CGTGGGAA+++++++++++++++++ |
| uce_m546_I_1555293_1555303 | I_1555293_1555303 | cluster_1 | D | 13 | 12 | 36 | +++++++++++++CAAACCACAAA++++++++++++ | ++++++++++++TTTGTGGTTTG+++++++++++++ |
| uce_m128_II_2248597_2248612 | II_2248597_2248612 | cluster_1 | R | 13 | 7 | 36 | +++++++++++++GAATCTTCGAGAGTAG+++++++ | +++++++CTaCTCTCGAAGATTC+++++++++++++ |
| uce_m203_I_3914211_3914221 | I_3914211_3914221 | cluster_1 | D | 13 | 12 | 36 | +++++++++++++GAATsTTCGAG++++++++++++ | ++++++++++++CTCGAASATTC+++++++++++++ |
| uce_m498_I_863121_863131 | I_863121_863131 | cluster_1 | D | 16 | 9 | 36 | ++++++++++++++++ACCGCCAACAT+++++++++ | +++++++++ATGTTGGCGGT++++++++++++++++ |
| uce_m157_II_3395169_3395176 | II_3395169_3395176 | cluster_1 | D | 16 | 12 | 36 | ++++++++++++++++TTTAAyGT++++++++++++ | ++++++++++++ACRTTAAA++++++++++++++++ |
| uce_m790_III_1995488_1995494 | III_1995488_1995494 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++CTTAATG+++++++++++++ | +++++++++++++CATTAAG++++++++++++++++ |
| uce_m500_III_2448435_2448441 | III_2448435_2448441 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++CTsGAAT++++++++++++ | ++++++++++++ATTCSAG+++++++++++++++++ |
| uce_m567_II_767703_767710 | II_767703_767710 | cluster_1 | R | 16 | 12 | 36 | ++++++++++++++++GTTCGAAT++++++++++++ | ++++++++++++ATTCGAAC++++++++++++++++ |
| uce_m590_II_1501110_1501117 | II_1501110_1501117 | cluster_1 | R | 16 | 12 | 36 | ++++++++++++++++TTTCTGTG++++++++++++ | ++++++++++++CACAGAAA++++++++++++++++ |
| uce_m62_I_2296742_2296752 | I_2296742_2296752 | cluster_1 | D | 17 | 8 | 36 | +++++++++++++++++ACACCACCAAC++++++++ | ++++++++GTTGGTGGTGT+++++++++++++++++ |
| uce_m392_II_3227902_3227910 | II_3227902_3227910 | cluster_1 | D | 18 | 9 | 36 | ++++++++++++++++++CAGmACCAA+++++++++ | +++++++++TTGGTKCTG++++++++++++++++++ |
| uce_m665_III_97106_97112 | III_97106_97112 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++TTCCATC+++++++++++++ | +++++++++++++GATGGAA++++++++++++++++ |
| uce_m771_II_2233996_2234003 | II_2233996_2234003 | cluster_1 | D | 14 | 14 | 36 | ++++++++++++++GTTTCCAT++++++++++++++ | ++++++++++++++ATGGAAAC++++++++++++++ |
| uce_m375_I_4846623_4846638 | I_4846623_4846638 | cluster_1 | D | 8 | 12 | 36 | ++++++++GTGGTTGGCACTGGTT++++++++++++ | ++++++++++++AACCAGTGCCAACCAC++++++++ |
| uce_m560_I_1928515_1928521 | I_1928515_1928521 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++TTACCTA++++++++++++ | ++++++++++++TAGGTAA+++++++++++++++++ |
| uce_m23_I_1907940_1907951 | I_1907940_1907951 | cluster_1 | D | 12 | 12 | 36 | ++++++++++++ACCAACTGCCAA++++++++++++ | ++++++++++++TTGGCAGTTGGT++++++++++++ |
| uce_m566_II_764973_764983 | II_764973_764983 | cluster_1 | D | 12 | 12 | 36 | ++++++++++++ACCACATACCAA++++++++++++ | ++++++++++++TTGGTATGTGGT++++++++++++ |
| uce_m16_I_5325139_5325147 | I_5325139_5325147 | cluster_1 | D | 14 | 13 | 36 | ++++++++++++++TTTATGGCA+++++++++++++ | +++++++++++++TGCCATAAA++++++++++++++ |
| uce_m173_I_1768590_1768598 | I_1768590_1768598 | cluster_1 | D | 15 | 12 | 36 | +++++++++++++++TTATGGAAC++++++++++++ | ++++++++++++GTTCCATAA+++++++++++++++ |
| uce_m77_I_924172_924178 | I_924172_924178 | cluster_1 | R | 14 | 15 | 36 | ++++++++++++++GTGCTKG+++++++++++++++ | +++++++++++++++CmAGCAC++++++++++++++ |
| uce_m134_III_2133015_2133021 | III_2133015_2133021 | cluster_1 | R | 14 | 15 | 36 | ++++++++++++++GTTCTAG+++++++++++++++ | +++++++++++++++CTAGAAC++++++++++++++ |
| uce_m87_III_400086_400093 | III_400086_400093 | cluster_1 | R | 15 | 13 | 36 | +++++++++++++++TGCYTCAC+++++++++++++ | +++++++++++++GTGArGCA+++++++++++++++ |
| uce_m194_I_1723715_1723721 | I_1723715_1723721 | cluster_1 | R | 15 | 14 | 36 | +++++++++++++++TGGTTCA++++++++++++++ | ++++++++++++++TGAACCA+++++++++++++++ |
| uce_m389_II_3271472_3271478 | II_3271472_3271478 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++AAGTCTA++++++++++++ | ++++++++++++TAGACTT+++++++++++++++++ |
| uce_m99_II_4044612_4044621 | II_4044612_4044621 | cluster_1 | D | 15 | 11 | 36 | +++++++++++++++GTTTATATAG+++++++++++ | +++++++++++CTATATAAAC+++++++++++++++ |
| uce_m263_II_2471233_2471240 | II_2471233_2471240 | cluster_1 | D | 15 | 13 | 36 | +++++++++++++++ACCAACgT+++++++++++++ | +++++++++++++ACGTTGGT+++++++++++++++ |
| uce_m663_I_911442_911451 | I_911442_911451 | cluster_1 | D | 15 | 11 | 36 | +++++++++++++++ACCAAACTTC+++++++++++ | +++++++++++GAAGTTTGGT+++++++++++++++ |
| uce_m132_III_1902455_1902465 | III_1902455_1902465 | cluster_1 | D | 19 | 6 | 36 | +++++++++++++++++++ArCTTCGCTTA++++++ | ++++++TAAGCGAAGYT+++++++++++++++++++ |
| uce_m457_II_4300034_4300044 | II_4300034_4300044 | cluster_1 | R | 19 | 6 | 36 | +++++++++++++++++++ACTTTCGTTTA++++++ | ++++++TAAACGAAAGT+++++++++++++++++++ |
| uce_m117_I_4375727_4375733 | I_4375727_4375733 | cluster_1 | D | 13 | 16 | 36 | +++++++++++++GAwCATC++++++++++++++++ | ++++++++++++++++GATGWTC+++++++++++++ |
| uce_m56_II_2133501_2133510 | II_2133501_2133510 | cluster_1 | D | 14 | 12 | 36 | ++++++++++++++GTGGTTGTTC++++++++++++ | ++++++++++++GAACAACCAC++++++++++++++ |
| uce_m588_II_1501060_1501068 | II_1501060_1501068 | cluster_1 | R | 20 | 7 | 36 | ++++++++++++++++++++GGTAGGGTA+++++++ | +++++++TACCCTACC++++++++++++++++++++ |
| uce_m594_I_4329479_4329487 | I_4329479_4329487 | cluster_1 | R | 18 | 9 | 36 | ++++++++++++++++++CACCACGCA+++++++++ | +++++++++TGCGTGGTG++++++++++++++++++ |
| uce_m724_III_1042646_1042653 | III_1042646_1042653 | cluster_1 | D | 19 | 9 | 36 | +++++++++++++++++++ACAGCGCA+++++++++ | +++++++++TGCGCTGT+++++++++++++++++++ |
| uce_m165_I_2759204_2759211 | I_2759204_2759211 | cluster_1 | D | 16 | 12 | 36 | ++++++++++++++++CTCTCACT++++++++++++ | ++++++++++++AGTGAGAG++++++++++++++++ |
| uce_m450_I_1415521_1415527 | I_1415521_1415527 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++AACGGTT+++++++++++++ | +++++++++++++AACCGTT++++++++++++++++ |
| uce_m7_II_2516180_2516187 | II_2516180_2516187 | cluster_1 | D | 16 | 12 | 36 | ++++++++++++++++GCCTAAyT++++++++++++ | ++++++++++++ARTTAGGC++++++++++++++++ |
| uce_m753_II_681703_681711 | II_681703_681711 | cluster_1 | R | 15 | 12 | 36 | +++++++++++++++AGCCGAMTT++++++++++++ | ++++++++++++AAkTCGGCT+++++++++++++++ |
| uce_m543_III_543190_543199 | III_543190_543199 | cluster_1 | D | 16 | 10 | 36 | ++++++++++++++++GCGTGGTTRG++++++++++ | ++++++++++CyAACCACGC++++++++++++++++ |
| uce_m15_I_3583721_3583727 | I_3583721_3583727 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++TTTATCG+++++++++++++ | +++++++++++++CGATAAA++++++++++++++++ |
| uce_m113_II_1611058_1611064 | II_1611058_1611064 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++GrTTTGA+++++++++++++ | +++++++++++++TCAAAYC++++++++++++++++ |
| uce_m721_II_2880768_2880781 | II_2880768_2880781 | cluster_1 | D | 17 | 5 | 36 | +++++++++++++++++CAGTCACAAAGTTT+++++ | +++++AAACTTTGTGACTG+++++++++++++++++ |
| uce_m515_II_2172246_2172253 | II_2172246_2172253 | cluster_1 | R | 18 | 10 | 36 | ++++++++++++++++++AAGCATCA++++++++++ | ++++++++++TGATGCTT++++++++++++++++++ |
| uce_m130_II_2262060_2262067 | II_2262060_2262067 | cluster_1 | D | 13 | 15 | 36 | +++++++++++++TGTCATCA+++++++++++++++ | +++++++++++++++TGATGACA+++++++++++++ |
| uce_m443_III_1036742_1036750 | III_1036742_1036750 | cluster_1 | D | 12 | 15 | 36 | ++++++++++++AGyTCATCA+++++++++++++++ | +++++++++++++++TGATGARCT++++++++++++ |
| uce_m297_I_2552628_2552634 | I_2552628_2552634 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++GTATTTT++++++++++++ | ++++++++++++AAAATAC+++++++++++++++++ |
| uce_m547_I_1555316_1555325 | I_1555316_1555325 | cluster_1 | D | 13 | 13 | 36 | +++++++++++++AAAAAAATtT+++++++++++++ | +++++++++++++AAATTTTTTT+++++++++++++ |
| uce_m630_I_2453555_2453561 | I_2453555_2453561 | cluster_1 | D | 15 | 14 | 36 | +++++++++++++++TAGCGGT++++++++++++++ | ++++++++++++++ACCGCTA+++++++++++++++ |
| uce_m75_II_1261636_1261642 | II_1261636_1261642 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++TGGcATT++++++++++++ | ++++++++++++AATGCCA+++++++++++++++++ |
| uce_m253_I_4310322_4310330 | I_4310322_4310330 | cluster_1 | R | 15 | 12 | 36 | +++++++++++++++TTTTGCATT++++++++++++ | ++++++++++++AATGCAAAA+++++++++++++++ |
| uce_m1_I_4672516_4672522 | I_4672516_4672522 | cluster_1 | D | 16 | 13 | 36 | ++++++++++++++++TrTATGC+++++++++++++ | +++++++++++++GCATAYA++++++++++++++++ |
| uce_m642_II_2245981_2245988 | II_2245981_2245988 | cluster_1 | D | 16 | 12 | 36 | ++++++++++++++++TCTACGCT++++++++++++ | ++++++++++++AGCGTAGA++++++++++++++++ |
| uce_m286_II_589264_589275 | II_589264_589275 | cluster_1 | R | 14 | 10 | 36 | ++++++++++++++TAGCAGTCACTT++++++++++ | ++++++++++AAGTGACTGCTA++++++++++++++ |
| uce_m585_III_956395_956401 | III_956395_956401 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++GTTARTA+++++++++++++ | +++++++++++++TAyTAAC++++++++++++++++ |
| uce_m436_II_1909430_1909436 | II_1909430_1909436 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++ACGCTCC++++++++++++ | ++++++++++++GGAGCGT+++++++++++++++++ |
| uce_m463_III_1482155_1482162 | III_1482155_1482162 | cluster_1 | R | 17 | 11 | 36 | +++++++++++++++++ACGCCACC+++++++++++ | +++++++++++GGtGGCGT+++++++++++++++++ |
| uce_m449_I_1415677_1415686 | I_1415677_1415686 | cluster_1 | R | 17 | 9 | 36 | +++++++++++++++++AAAACACCAC+++++++++ | +++++++++GTGGTGTTTT+++++++++++++++++ |
| uce_m34_I_4710652_4710659 | I_4710652_4710659 | cluster_1 | R | 20 | 8 | 36 | ++++++++++++++++++++GCTCCGRT++++++++ | ++++++++AyCGGAGC++++++++++++++++++++ |
| uce_m184_I_3466932_3466941 | I_3466932_3466941 | cluster_1 | R | 20 | 6 | 36 | ++++++++++++++++++++GTTCCGGTTA++++++ | ++++++TAACCGGAAC++++++++++++++++++++ |
| uce_m236_I_4117318_4117339 | I_4117318_4117339 | cluster_1 | R | 4 | 10 | 36 | ++++ACCTGCGCAGAACAAACGAAAA++++++++++ | ++++++++++TTTTCGTTTGTTCTGCGCAGGT++++ |
| uce_m781_II_1835816_1835833 | II_1835816_1835833 | cluster_1 | D | 6 | 12 | 36 | ++++++CTGCGCACAACCAACmAC++++++++++++ | ++++++++++++GTKGTTGGTTGTGCGCAG++++++ |
| uce_m211_II_1822019_1822025 | II_1822019_1822025 | cluster_1 | D | 15 | 14 | 36 | +++++++++++++++AAAGGCT++++++++++++++ | ++++++++++++++AGCCTTT+++++++++++++++ |
| uce_m333_III_1732803_1732811 | III_1732803_1732811 | cluster_1 | R | 17 | 10 | 36 | +++++++++++++++++TTGTATATG++++++++++ | ++++++++++CATATACAA+++++++++++++++++ |
| uce_m677_II_1776261_1776269 | II_1776261_1776269 | cluster_1 | D | 19 | 8 | 36 | +++++++++++++++++++ATCAGGTGA++++++++ | ++++++++TCACCTGAT+++++++++++++++++++ |
| uce_m534_I_4951742_4951754 | I_4951742_4951754 | cluster_1 | R | 13 | 10 | 36 | +++++++++++++GAAGCTTCTAGAA++++++++++ | ++++++++++TTCTAGAAGCTTC+++++++++++++ |
| uce_m121_III_1407352_1407362 | III_1407352_1407362 | cluster_1 | D | 17 | 8 | 36 | +++++++++++++++++GTCGyAAGAGT++++++++ | ++++++++ACTCTTRCGAC+++++++++++++++++ |
| uce_m258_I_2255069_2255077 | I_2255069_2255077 | cluster_1 | D | 17 | 10 | 36 | +++++++++++++++++GTCGAAACA++++++++++ | ++++++++++TGTTTCGAC+++++++++++++++++ |
| uce_m257_I_2255082_2255088 | I_2255082_2255088 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++CCATATT++++++++++++ | ++++++++++++AATATGG+++++++++++++++++ |
| uce_m345_I_3874163_3874169 | I_3874163_3874169 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++TCAGATT++++++++++++ | ++++++++++++AATCTGA+++++++++++++++++ |
| uce_m73_I_1014615_1014623 | I_1014615_1014623 | cluster_1 | D | 15 | 12 | 36 | +++++++++++++++GTCTGGwAC++++++++++++ | ++++++++++++GTWCCAGAC+++++++++++++++ |
| uce_m434_I_5269026_5269034 | I_5269026_5269034 | cluster_1 | R | 15 | 12 | 36 | +++++++++++++++GGCTGGCAT++++++++++++ | ++++++++++++ATGCCAGCC+++++++++++++++ |
| uce_m234_I_4116889_4116897 | I_4116889_4116897 | cluster_1 | R | 14 | 13 | 36 | ++++++++++++++TSTTTTCGG+++++++++++++ | +++++++++++++CCGAAAAsA++++++++++++++ |
| uce_m767_II_2232789_2232795 | II_2232789_2232795 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++ATAAGCA++++++++++++ | ++++++++++++TGCTTAT+++++++++++++++++ |
| uce_m111_II_1611142_1611151 | II_1611142_1611151 | cluster_1 | R | 16 | 10 | 36 | ++++++++++++++++GACGTTTATG++++++++++ | ++++++++++CATAAACGTC++++++++++++++++ |
| uce_m160_I_2833991_2833998 | I_2833991_2833998 | cluster_1 | R | 18 | 10 | 36 | ++++++++++++++++++CGTTTACC++++++++++ | ++++++++++GgTAAACG++++++++++++++++++ |
| uce_m278_I_3369840_3369849 | I_3369840_3369849 | cluster_1 | R | 14 | 12 | 36 | ++++++++++++++CATCCACCAA++++++++++++ | ++++++++++++TTGGTGGATG++++++++++++++ |
| uce_m245_I_4520114_4520126 | I_4520114_4520126 | cluster_1 | D | 13 | 10 | 36 | +++++++++++++TGGTGGTGGTYAA++++++++++ | ++++++++++TTrACCACCACCA+++++++++++++ |
| uce_m786_II_1835688_1835695 | II_1835688_1835695 | cluster_1 | R | 19 | 9 | 36 | +++++++++++++++++++AWCCCGAC+++++++++ | +++++++++GTCGGGwT+++++++++++++++++++ |
| uce_m461_II_4259631_4259637 | II_4259631_4259637 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++GTGGATC++++++++++++ | ++++++++++++GATCCAC+++++++++++++++++ |
| uce_m213_I_4881769_4881780 | I_4881769_4881780 | cluster_1 | D | 13 | 11 | 36 | +++++++++++++TCCACAACCAAA+++++++++++ | +++++++++++TTTGGTTGTGGA+++++++++++++ |
| uce_m301_I_3710523_3710529 | I_3710523_3710529 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++AATTRTC++++++++++++ | ++++++++++++GAyAATT+++++++++++++++++ |
| uce_m347_I_3874104_3874118 | I_3874104_3874118 | cluster_1 | R | 13 | 8 | 36 | +++++++++++++TGGAAGGATACTTGA++++++++ | ++++++++TCAaGTATCCTTCCA+++++++++++++ |
| uce_m481_I_592191_592205 | I_592191_592205 | cluster_1 | R | 14 | 7 | 36 | ++++++++++++++GAACGGATATCTGAT+++++++ | +++++++ATCAGATATCCGTTC++++++++++++++ |
| uce_m205_III_1242741_1242754 | III_1242741_1242754 | cluster_1 | D | 13 | 9 | 36 | +++++++++++++CATCTGGAAAATTC+++++++++ | +++++++++GAATTTTCCAGATG+++++++++++++ |
| uce_m370_I_4583747_4583753 | I_4583747_4583753 | cluster_1 | R | 16 | 13 | 36 | ++++++++++++++++TTCGATA+++++++++++++ | +++++++++++++TATCGAA++++++++++++++++ |
| uce_m255_II_2767465_2767471 | II_2767465_2767471 | cluster_1 | R | 19 | 10 | 36 | +++++++++++++++++++AGARGGG++++++++++ | ++++++++++CCCyTCT+++++++++++++++++++ |
| uce_m430_I_2054039_2054045 | I_2054039_2054045 | cluster_1 | R | 19 | 10 | 36 | +++++++++++++++++++AGCAAGG++++++++++ | ++++++++++CCTTGCT+++++++++++++++++++ |
| uce_m625_I_2595537_2595549 | I_2595537_2595549 | cluster_1 | R | 19 | 4 | 36 | +++++++++++++++++++AGGAAGGGTGAGG++++ | ++++CCTCACCCTTCCT+++++++++++++++++++ |
| uce_m459_II_4262353_4262363 | II_4262353_4262363 | cluster_1 | R | 14 | 11 | 36 | ++++++++++++++GGTTGAATTTG+++++++++++ | +++++++++++CAAATTCAACC++++++++++++++ |
| uce_m591_II_1501134_1501145 | II_1501134_1501145 | cluster_1 | R | 14 | 10 | 36 | ++++++++++++++TGAGGAATTTGC++++++++++ | ++++++++++GCAAATTCCTCA++++++++++++++ |
| uce_m412_I_1811540_1811546 | I_1811540_1811546 | cluster_1 | R | 17 | 12 | 36 | +++++++++++++++++AGRAGTA++++++++++++ | ++++++++++++TACTYCT+++++++++++++++++ |
| uce_m468_III_1488903_1488912 | III_1488903_1488912 | cluster_1 | D | 20 | 6 | 36 | ++++++++++++++++++++GATCTGATAA++++++ | ++++++TTATCAGATC++++++++++++++++++++ |
| uce_m733_I_3202397_3202404 | I_3202397_3202404 | cluster_1 | R | 22 | 6 | 36 | ++++++++++++++++++++++TCTCGTAA++++++ | ++++++TTACGAGA++++++++++++++++++++++ |
| uce_m382_II_3175204_3175211 | II_3175204_3175211 | cluster_1 | D | 13 | 15 | 36 | +++++++++++++GaGAACAG+++++++++++++++ | +++++++++++++++CTGTTCTC+++++++++++++ |
| uce_m477_I_1157534_1157541 | I_1157534_1157541 | cluster_1 | D | 13 | 15 | 36 | +++++++++++++TTCAACAG+++++++++++++++ | +++++++++++++++CTGTTGAA+++++++++++++ |
| uce_m153_II_1755040_1755047 | II_1755040_1755047 | cluster_1 | R | 16 | 12 | 36 | ++++++++++++++++CTTGCAAT++++++++++++ | ++++++++++++ATTGCAAG++++++++++++++++ |
| uce_m180_I_3657434_3657440 | I_3657434_3657440 | cluster_1 | R | 18 | 11 | 36 | ++++++++++++++++++TGCAGTG+++++++++++ | +++++++++++CACTGCA++++++++++++++++++ |
| uce_m154_II_1755056_1755064 | II_1755056_1755064 | cluster_1 | R | 17 | 10 | 36 | +++++++++++++++++GAGTCTCCT++++++++++ | ++++++++++AGGAgACTC+++++++++++++++++ |
| uce_m272_II_1361455_1361470 | II_1361455_1361470 | cluster_1 | D | 12 | 8 | 36 | ++++++++++++ArATACTGGCAAGTAT++++++++ | ++++++++ATACTTGCCAGTATYT++++++++++++ |
| uce_m19_III_580731_580737 | III_580731_580737 | cluster_1 | D | 15 | 14 | 36 | +++++++++++++++TCTTCgT++++++++++++++ | ++++++++++++++ACGAAGA+++++++++++++++ |
| uce_m287_II_579351_579359 | II_579351_579359 | cluster_1 | R | 15 | 12 | 36 | +++++++++++++++TCGTCATGA++++++++++++ | ++++++++++++TCATGACGA+++++++++++++++ |
| uce_m611_I_403689_403696 | I_403689_403696 | cluster_1 | R | 18 | 10 | 36 | ++++++++++++++++++AGGTTAAG++++++++++ | ++++++++++CTTAACCT++++++++++++++++++ |
| uce_m473_III_1260560_1260572 | III_1260560_1260572 | cluster_1 | R | 9 | 14 | 36 | +++++++++CGATTAGTCTTGA++++++++++++++ | ++++++++++++++TCAAGACTAATCG+++++++++ |
| uce_m478_III_1310508_1310517 | III_1310508_1310517 | cluster_1 | D | 12 | 14 | 36 | ++++++++++++TTATTCTGGA++++++++++++++ | ++++++++++++++TCCAGAATAA++++++++++++ |
| uce_m31_II_3661260_3661270 | II_3661260_3661270 | cluster_1 | D | 16 | 9 | 36 | ++++++++++++++++CCTAGCAAGAA+++++++++ | +++++++++TTCTTGCTAGG++++++++++++++++ |
| uce_m123_III_1407320_1407329 | III_1407320_1407329 | cluster_1 | D | 15 | 11 | 36 | +++++++++++++++CCGTAGCACG+++++++++++ | +++++++++++CGTGCTACGG+++++++++++++++ |
| uce_m573_III_1673592_1673598 | III_1673592_1673598 | cluster_1 | D | 18 | 11 | 36 | ++++++++++++++++++TGCGTTA+++++++++++ | +++++++++++TAACGCA++++++++++++++++++ |
| uce_m273_II_1361412_1361425 | II_1361412_1361425 | cluster_1 | D | 11 | 11 | 36 | +++++++++++TCGTCATAGTCGAT+++++++++++ | +++++++++++ATCGACTATGACGA+++++++++++ |
| uce_m643_II_2246043_2246054 | II_2246043_2246054 | cluster_1 | R | 11 | 13 | 36 | +++++++++++TCTTTACAGTCA+++++++++++++ | +++++++++++++TGACTGTAAAGA+++++++++++ |
| uce_m416_I_1298088_1298098 | I_1298088_1298098 | cluster_1 | D | 13 | 12 | 36 | +++++++++++++AAAGTTGTGTA++++++++++++ | ++++++++++++TACACAACTTT+++++++++++++ |
| uce_m240_III_197816_197824 | III_197816_197824 | cluster_1 | R | 13 | 14 | 36 | +++++++++++++CAGTTTTTG++++++++++++++ | ++++++++++++++CAAAAACTG+++++++++++++ |
| uce_m200_I_5394750_5394762 | I_5394750_5394762 | cluster_1 | R | 15 | 8 | 36 | +++++++++++++++TCATRAGCAAATA++++++++ | ++++++++TATTTGCTyATGA+++++++++++++++ |
| uce_m294_I_554063_554074 | I_554063_554074 | cluster_1 | D | 13 | 11 | 36 | +++++++++++++ACCTTTGGAAAA+++++++++++ | +++++++++++TTTTCCAAAGGT+++++++++++++ |
| uce_m634_I_1225991_1226002 | I_1225991_1226002 | cluster_1 | D | 14 | 10 | 36 | ++++++++++++++ACTTTGGAGCAA++++++++++ | ++++++++++TTGCTCCAAAGT++++++++++++++ |
| uce_m448_I_3074499_3074506 | I_3074499_3074506 | cluster_1 | D | 15 | 13 | 36 | +++++++++++++++CCAATCGG+++++++++++++ | +++++++++++++CCGATTGG+++++++++++++++ |
| uce_m785_II_1835712_1835718 | II_1835712_1835718 | cluster_1 | D | 15 | 14 | 36 | +++++++++++++++GCAAGCG++++++++++++++ | ++++++++++++++CGCTTGC+++++++++++++++ |
| uce_m283_I_1493497_1493510 | I_1493497_1493510 | cluster_1 | D | 14 | 8 | 36 | ++++++++++++++AACCTTCAACATGG++++++++ | ++++++++CCATGTTGAAGGTT++++++++++++++ |
| uce_m460_II_4262206_4262216 | II_4262206_4262216 | cluster_1 | D | 16 | 9 | 36 | ++++++++++++++++CTTTCAACTAG+++++++++ | +++++++++CTAGTTGAAAG++++++++++++++++ |
| uce_m199_I_5394974_5394980 | I_5394974_5394980 | cluster_1 | R | 15 | 14 | 36 | +++++++++++++++ATCAGGC++++++++++++++ | ++++++++++++++GCCTGaT+++++++++++++++ |
| uce_m421_I_1329300_1329308 | I_1329300_1329308 | cluster_1 | D | 14 | 13 | 36 | ++++++++++++++AACTGTTGG+++++++++++++ | +++++++++++++CCaACAGTT++++++++++++++ |
| uce_m182_I_1524724_1524737 | I_1524724_1524737 | cluster_1 | R | 12 | 10 | 36 | ++++++++++++TTYTCTTGAGTGTC++++++++++ | ++++++++++GACACTCAAGArAA++++++++++++ |
| uce_m544_I_1542108_1542119 | I_1542108_1542119 | cluster_1 | D | 12 | 12 | 36 | ++++++++++++TTGCATTTAGTG++++++++++++ | ++++++++++++CACTAAATGCAA++++++++++++ |
| uce_m81_I_910603_910609 | I_910603_910609 | cluster_1 | D | 17 | 12 | 36 | +++++++++++++++++ATTAGCT++++++++++++ | ++++++++++++AGCTAAT+++++++++++++++++ |
| uce_m148_II_1764331_1764344 | II_1764331_1764344 | cluster_1 | R | 15 | 7 | 36 | +++++++++++++++GACAGATACGGTGG+++++++ | +++++++CCACCGTATCTGTC+++++++++++++++ |
| uce_m426_III_1700236_1700245 | III_1700236_1700245 | cluster_1 | R | 14 | 12 | 36 | ++++++++++++++TGGCAGATAC++++++++++++ | ++++++++++++GTATCTGCCA++++++++++++++ |
| uce_m12_II_2516291_2516306 | II_2516291_2516306 | cluster_1 | R | 20 | 0 | 36 | ++++++++++++++++++++AGAGGTCAGCCACGGT | ACCGTGGCTGACCTCT++++++++++++++++++++ |
| uce_m735_II_1159561_1159568 | II_1159561_1159568 | cluster_1 | D | 20 | 7 | 36 | ++++++++++++++++++++AGGGGTCAG+++++++ | +++++++CTGACCCCT++++++++++++++++++++ |
| uce_m528_III_736947_736953 | III_736947_736953 | cluster_1 | R | 14 | 15 | 36 | ++++++++++++++GGTCTCG+++++++++++++++ | +++++++++++++++CGAGACC++++++++++++++ |
| uce_m427_III_1700272_1700282 | III_1700272_1700282 | cluster_1 | R | 13 | 12 | 36 | +++++++++++++TTACGAACCAA++++++++++++ | ++++++++++++TTGGTTCGTAA+++++++++++++ |
| uce_m509_I_3930067_3930077 | I_3930067_3930077 | cluster_1 | D | 13 | 12 | 36 | +++++++++++++TTCCCAACAAC++++++++++++ | ++++++++++++GTTGTTGGGAA+++++++++++++ |
| uce_m144_I_4890505_4890514 | I_4890505_4890514 | cluster_1 | R | 16 | 10 | 36 | ++++++++++++++++CACGTTCCCC++++++++++ | ++++++++++GGGGAACGTG++++++++++++++++ |
| uce_m214_I_4881753_4881761 | I_4881753_4881761 | cluster_1 | D | 15 | 12 | 36 | +++++++++++++++GGTCAAATA++++++++++++ | ++++++++++++TATTTGACC+++++++++++++++ |
| uce_m147_II_1779357_1779366 | II_1779357_1779366 | cluster_1 | D | 12 | 14 | 36 | ++++++++++++GTCAGTCCAC++++++++++++++ | ++++++++++++++GTGGACTGAC++++++++++++ |
| uce_m583_III_956479_956490 | III_956479_956490 | cluster_1 | R | 12 | 12 | 36 | ++++++++++++GTCAATCGTCAC++++++++++++ | ++++++++++++GTGACGATTGAC++++++++++++ |
| uce_m145_I_4890538_4890547 | I_4890538_4890547 | cluster_1 | R | 17 | 9 | 36 | +++++++++++++++++GTATGAAGTA+++++++++ | +++++++++TACTTCATaC+++++++++++++++++ |
| uce_m32_II_3661319_3661328 | II_3661319_3661328 | cluster_1 | R | 16 | 10 | 36 | ++++++++++++++++GCTCGTAGGG++++++++++ | ++++++++++CCCTACGAGC++++++++++++++++ |
| uce_m415_I_1265974_1265984 | I_1265974_1265984 | cluster_1 | D | 15 | 10 | 36 | +++++++++++++++TTTTCCCGTAG++++++++++ | ++++++++++CTACGGGAAAA+++++++++++++++ |
| uce_m539_II_4384007_4384013 | II_4384007_4384013 | cluster_1 | D | 18 | 11 | 36 | ++++++++++++++++++GAAGCTG+++++++++++ | +++++++++++CAGCTTC++++++++++++++++++ |
| uce_m271_II_1361662_1361669 | II_1361662_1361669 | cluster_1 | D | 15 | 13 | 36 | +++++++++++++++TCCTRTAC+++++++++++++ | +++++++++++++GTAyAGGA+++++++++++++++ |
| uce_m21_III_569027_569035 | III_569027_569035 | cluster_1 | R | 13 | 14 | 36 | +++++++++++++TCCGTCTTG++++++++++++++ | ++++++++++++++CAAGACGGA+++++++++++++ |
| uce_m555_III_2143217_2143226 | III_2143217_2143226 | cluster_1 | D | 11 | 15 | 36 | +++++++++++CCTCCTTCGT+++++++++++++++ | +++++++++++++++ACGAAGGAGG+++++++++++ |
| uce_m783_II_1835737_1835746 | II_1835737_1835746 | cluster_1 | R | 14 | 12 | 36 | ++++++++++++++AAAAAGCTCG++++++++++++ | ++++++++++++CGAGCTTTTT++++++++++++++ |
| uce_m120_III_1407392_1407400 | III_1407392_1407400 | cluster_1 | D | 20 | 7 | 36 | ++++++++++++++++++++CCTCTCATC+++++++ | +++++++GATGAGAGG++++++++++++++++++++ |
| uce_m226_III_696846_696858 | III_696846_696858 | cluster_1 | R | 18 | 5 | 36 | ++++++++++++++++++ACACTCTGATCTG+++++ | +++++CAGATCAGAGTGT++++++++++++++++++ |
| uce_m516_II_2172230_2172242 | II_2172230_2172242 | cluster_1 | R | 11 | 12 | 36 | +++++++++++AAAAGGTTCAAAA++++++++++++ | ++++++++++++TTTTGAACCTTTT+++++++++++ |
| uce_m162_I_2802191_2802205 | I_2802191_2802205 | cluster_1 | R | 13 | 8 | 36 | +++++++++++++TGGTAAAAGGGTTGA++++++++ | ++++++++TCAACCCTTTTACCA+++++++++++++ |
| uce_m728_II_1530462_1530478 | II_1530462_1530478 | cluster_1 | R | 11 | 8 | 36 | +++++++++++GTTGGTAAACGGTAAGT++++++++ | ++++++++ACTTACCGTTTACCAAC+++++++++++ |
| uce_m315_III_662504_662514 | III_662504_662514 | cluster_1 | D | 18 | 7 | 36 | ++++++++++++++++++CACCrCAGGAC+++++++ | +++++++GTCCTGYGGTG++++++++++++++++++ |
| uce_m718_III_636405_636414 | III_636405_636414 | cluster_1 | D | 19 | 7 | 36 | +++++++++++++++++++AACACAAGCC+++++++ | +++++++GGCTTGTGTT+++++++++++++++++++ |
| uce_m708_II_571263_571272 | II_571263_571272 | cluster_1 | R | 14 | 12 | 36 | ++++++++++++++GTGAATTGCT++++++++++++ | ++++++++++++AGCAATTCAC++++++++++++++ |
| uce_m766_II_2232761_2232770 | II_2232761_2232770 | cluster_1 | R | 15 | 11 | 36 | +++++++++++++++AGGCGTTTCT+++++++++++ | +++++++++++AGAAACGCCT+++++++++++++++ |
| uce_m441_III_1907385_1907393 | III_1907385_1907393 | cluster_1 | R | 20 | 7 | 36 | ++++++++++++++++++++GCTAGGATG+++++++ | +++++++CATCCTAGC++++++++++++++++++++ |
| uce_m112_II_1611097_1611104 | II_1611097_1611104 | cluster_1 | R | 16 | 12 | 36 | ++++++++++++++++TCTGCARA++++++++++++ | ++++++++++++TyTGCAGA++++++++++++++++ |
| uce_m691_I_4118669_4118681 | I_4118669_4118681 | cluster_1 | D | 15 | 8 | 36 | +++++++++++++++GTCTGCAACACCG++++++++ | ++++++++CGGTGTTGCAGAC+++++++++++++++ |
| uce_m773_II_2907619_2907630 | II_2907619_2907630 | cluster_1 | R | 16 | 8 | 36 | ++++++++++++++++TATTTATACYTT++++++++ | ++++++++AArGTATAAATA++++++++++++++++ |
| uce_m172_I_2880074_2880088 | I_2880074_2880088 | cluster_1 | R | 13 | 8 | 36 | +++++++++++++TAACCATCGTGTCAC++++++++ | ++++++++GTGACACGATGGTTA+++++++++++++ |
| uce_m784_II_1835724_1835734 | II_1835724_1835734 | cluster_1 | D | 13 | 12 | 36 | +++++++++++++TAAGCCTCGTC++++++++++++ | ++++++++++++GACGAGGCTTA+++++++++++++ |
| uce_m29_II_3661206_3661220 | II_3661206_3661220 | cluster_1 | R | 7 | 14 | 36 | +++++++GGTGAATAAACTAGC++++++++++++++ | ++++++++++++++GCTAGTTTATTCACC+++++++ |
| uce_m142_I_4890459_4890473 | I_4890459_4890473 | cluster_1 | R | 8 | 13 | 36 | ++++++++GTGAATAGTGTGGAT+++++++++++++ | +++++++++++++ATCCACACTATTCAC++++++++ |
| uce_m124_III_1407269_1407279 | III_1407269_1407279 | cluster_1 | R | 17 | 8 | 36 | +++++++++++++++++GAGTCACGRAC++++++++ | ++++++++GTyCGTGACTC+++++++++++++++++ |
| uce_m190_I_1726351_1726361 | I_1726351_1726361 | cluster_1 | D | 14 | 11 | 36 | ++++++++++++++CTAATATACAT+++++++++++ | +++++++++++ATGTATATTAG++++++++++++++ |
| uce_m10_II_2516230_2516247 | II_2516230_2516247 | cluster_1 | D | 9 | 9 | 36 | +++++++++TCTCGAGGTCGCAAAGTC+++++++++ | +++++++++GACTTTGCGACCTCGAGA+++++++++ |
| uce_m198_I_5395001_5395018 | I_5395001_5395018 | cluster_1 | R | 10 | 8 | 36 | ++++++++++CTCTCAATCGCAAATTAT++++++++ | ++++++++ATAATTTGCGATTGAGAG++++++++++ |
| uce_m742_II_1881945_1881957 | II_1881945_1881957 | cluster_1 | D | 15 | 8 | 36 | +++++++++++++++GCTCGTGGATGGT++++++++ | ++++++++ACCATCCACGAGC+++++++++++++++ |
| uce_m466_III_1483982_1483998 | III_1483982_1483998 | cluster_1 | D | 8 | 11 | 36 | ++++++++TACACCACCCAAAAACT+++++++++++ | +++++++++++AGTTTTTGGGTGGTGTA++++++++ |
| uce_m659_II_4223808_4223826 | II_4223808_4223826 | cluster_1 | D | 7 | 9 | 36 | +++++++TCCGTCCACCAAAAAACAGC+++++++++ | +++++++++GCTGTTTTTTGGTGGACGGA+++++++ |
| uce_m85_III_95476_95494 | III_95476_95494 | cluster_1 | D | 5 | 11 | 36 | +++++CTCTTGACCAACGACGAACG+++++++++++ | +++++++++++CGTTCGTCGTTGGTCAAGAG+++++ |
| uce_m110_II_1611770_1611786 | II_1611770_1611786 | cluster_1 | D | 6 | 13 | 36 | ++++++ACCAGACCCACGACACA+++++++++++++ | +++++++++++++TGTGTCGTGGGTCTGGT++++++ |
| uce_m201_I_5394712_5394726 | I_5394712_5394726 | cluster_1 | R | 14 | 7 | 36 | ++++++++++++++TCAGMGATCTTGGTG+++++++ | +++++++CACCAAGATCkCTGA++++++++++++++ |
| uce_m734_II_1159537_1159554 | II_1159537_1159554 | cluster_1 | R | 11 | 7 | 36 | +++++++++++TTTTGAGAGAAGTAGGTT+++++++ | +++++++AACCTACTTCTCTCAAAA+++++++++++ |
| uce_m94_III_983250_983261 | III_983250_983261 | cluster_1 | R | 12 | 12 | 36 | ++++++++++++TGCAGAATCGTA++++++++++++ | ++++++++++++TACGATTCTGCA++++++++++++ |
| uce_m282_I_1490934_1490945 | I_1490934_1490945 | cluster_1 | R | 12 | 12 | 36 | ++++++++++++TGAGGGAACGAA++++++++++++ | ++++++++++++TTCGTTCCCTCA++++++++++++ |
| uce_m584_III_956467_956476 | III_956467_956476 | cluster_1 | D | 15 | 11 | 36 | +++++++++++++++GGAAGCCAAA+++++++++++ | +++++++++++TTTGGCTTCC+++++++++++++++ |
| uce_m241_III_197848_197861 | III_197848_197861 | cluster_1 | R | 11 | 11 | 36 | +++++++++++ATTAGTCTGAGTGC+++++++++++ | +++++++++++GCACTCAGACTAAT+++++++++++ |
| uce_m260_II_2314040_2314054 | II_2314040_2314054 | cluster_1 | D | 10 | 11 | 36 | ++++++++++GACTGCTAGTCCTGT+++++++++++ | +++++++++++ACAGGACTAGCAGTC++++++++++ |
| uce_m640_II_2245918_2245934 | II_2245918_2245934 | cluster_1 | R | 10 | 9 | 36 | ++++++++++GATTGGAAATCATTTTG+++++++++ | +++++++++CAAAATGATTTCCAATC++++++++++ |
| uce_m284_I_1493568_1493590 | I_1493568_1493590 | cluster_1 | D | 6 | 7 | 36 | ++++++TTTTCTCATCAACTGAGGGTAAC+++++++ | +++++++GTTACCCTCAGTTGATGAGAAAA++++++ |
| uce_m440_III_1907401_1907420 | III_1907401_1907420 | cluster_1 | R | 8 | 8 | 36 | ++++++++ATCTGATTTAATGAGSCTGA++++++++ | ++++++++TCAGsCTCATTAAATCAGAT++++++++ |
| uce_m242_III_197907_197921 | III_197907_197921 | cluster_1 | R | 9 | 12 | 36 | +++++++++GCACTCCATTAAGTT++++++++++++ | ++++++++++++AACTTAATGGAGTGC+++++++++ |
| uce_m373_I_373887_373898 | I_373887_373898 | cluster_1 | R | 8 | 16 | 36 | ++++++++CTCACGCCATTT++++++++++++++++ | ++++++++++++++++AAATGGCGTGAG++++++++ |
| uce_m551_III_2143727_2143741 | III_2143727_2143741 | cluster_1 | R | 13 | 8 | 36 | +++++++++++++TGGTCACCGCTGTCT++++++++ | ++++++++AGACAGCGGTGACCA+++++++++++++ |
| uce_m641_II_2245948_2245964 | II_2245948_2245964 | cluster_1 | R | 13 | 6 | 36 | +++++++++++++TGGGCATCCKTTTCGGA++++++ | ++++++TCCGAAAmGGATGCCCA+++++++++++++ |
| uce_m8_II_2516189_2516203 | II_2516189_2516203 | cluster_1 | D | 12 | 9 | 36 | ++++++++++++AATAGGTCATAAGAG+++++++++ | +++++++++CTCTTATGACCTATT++++++++++++ |
| uce_m346_I_3874134_3874147 | I_3874134_3874147 | cluster_1 | D | 13 | 9 | 36 | +++++++++++++AAACGTAACAAGGT+++++++++ | +++++++++ACCTTGTTACGTTT+++++++++++++ |
| uce_m432_I_2053985_2053999 | I_2053985_2053999 | cluster_1 | D | 13 | 8 | 36 | +++++++++++++AGCAAGGAACCCGtA++++++++ | ++++++++TACGGGTTCCTTGCT+++++++++++++ |
| uce_m702_I_3261348_3261367 | I_3261348_3261367 | cluster_1 | D | 8 | 8 | 36 | ++++++++CCATCCGCrAGGAAGAGGCA++++++++ | ++++++++TGCCTCTTCCTYGCGGATGG++++++++ |
| uce_m431_I_2054032_2054040 | I_2054032_2054040 | cluster_1 | D | 14 | 13 | 36 | ++++++++++++++TGCTCGCCC+++++++++++++ | +++++++++++++GGGCGAGCA++++++++++++++ |
| uce_m354_II_2850965_2850974 | II_2850965_2850974 | cluster_1 | D | 13 | 13 | 36 | +++++++++++++CAGAGTTCGA+++++++++++++ | +++++++++++++TCGAACTCTG+++++++++++++ |
| uce_m208_II_1644282_1644296 | II_1644282_1644296 | cluster_1 | D | 12 | 9 | 36 | ++++++++++++AATCTTTGCAACTCA+++++++++ | +++++++++TGAGTTGCAAAGATT++++++++++++ |
| uce_m11_II_2516254_2516265 | II_2516254_2516265 | cluster_1 | R | 12 | 12 | 36 | ++++++++++++ACTGCCAGAGTC++++++++++++ | ++++++++++++GACTCTGGCAGT++++++++++++ |
| uce_m36_II_4189285_4189299 | II_4189285_4189299 | cluster_1 | D | 13 | 8 | 36 | +++++++++++++AGGAGTTGAATCCYC++++++++ | ++++++++GrGGATTCAACTCCT+++++++++++++ |
| uce_m414_I_1265989_1266006 | I_1265989_1266006 | cluster_1 | R | 11 | 7 | 36 | +++++++++++CGTGGAAGGGAAATGGTT+++++++ | +++++++AACCATTTCCCTTCCACG+++++++++++ |
| uce_m274_II_1361394_1361409 | II_1361394_1361409 | cluster_1 | D | 14 | 6 | 36 | ++++++++++++++GACGGGTAAAGAAGAC++++++ | ++++++GTCTTCTTTACCCGTC++++++++++++++ |
| uce_m506_I_2362110_2362125 | I_2362110_2362125 | cluster_1 | R | 10 | 10 | 36 | ++++++++++AGACCAMAGGTAGAGA++++++++++ | ++++++++++TCTCTACCTkTGGTCT++++++++++ |
| uce_m72_I_1010036_1010048 | I_1010036_1010048 | cluster_1 | D | 17 | 6 | 36 | +++++++++++++++++TAGGCTGGTCCTA++++++ | ++++++TAGGACCAGCCTA+++++++++++++++++ |
| uce_m633_I_1226004_1226025 | I_1226004_1226025 | cluster_1 | R | 5 | 9 | 36 | +++++TTTCTCTCCTCCACGTACCACC+++++++++ | +++++++++GGTGGTACGTGGAGGAGAGAAA+++++ |
| uce_m338_I_5038624_5038637 | I_5038624_5038637 | cluster_1 | R | 7 | 15 | 36 | +++++++TGCACAAAACCTCT+++++++++++++++ | +++++++++++++++AGAGGTTTTGTGCA+++++++ |
| uce_m66_II_2741453_2741468 | II_2741453_2741468 | cluster_1 | D | 11 | 9 | 36 | +++++++++++TwCCGAGACATTAAAA+++++++++ | +++++++++TTTTAATGTCTCGGWA+++++++++++ |
| uce_m67_II_2741513_2741526 | II_2741513_2741526 | cluster_1 | R | 13 | 9 | 36 | +++++++++++++CCGRGTGATAACTG+++++++++ | +++++++++CAGTTATCACyCGG+++++++++++++ |
| uce_m9_II_2516207_2516222 | II_2516207_2516222 | cluster_1 | D | 3 | 17 | 36 | +++GGTTCTTTrTCAACGA+++++++++++++++++ | +++++++++++++++++TCGTTGAYAAAGAACC+++ |
| uce_m340_I_5031810_5031827 | I_5031810_5031827 | cluster_1 | R | 10 | 7 | 36 | ++++++++++CGGGAAATAGATAGTAGAT+++++++ | +++++++ATCTACTATCTATTTCCCG++++++++++ |
| uce_m129_II_2262017_2262038 | II_2262017_2262038 | cluster_1 | D | 5 | 9 | 36 | +++++TCTCAGACGGCACTTCCTATAT+++++++++ | +++++++++ATATAGGAAGTGCCGTCTGAGA+++++ |
| uce_m348_I_3874061_3874081 | I_3874061_3874081 | cluster_1 | D | 6 | 9 | 36 | ++++++CyGGGATGGCTTTTCAGGTTA+++++++++ | +++++++++TAACCTGAAAAGCCATCCCRG++++++ |
| uce_m171_I_2880057_2880076 | I_2880057_2880076 | cluster_1 | D | 7 | 9 | 36 | +++++++TTACgGTGCAGGGGTCTTGA+++++++++ | +++++++++TCAAGACCCCTGCACCGTAA+++++++ |
| uce_m6_II_2516158_2516178 | II_2516158_2516178 | cluster_1 | R | 11 | 4 | 36 | +++++++++++ATTGGCGTAGGGGCCGACGAT++++ | ++++ATCGTCGGCCCCTACGCCAAT+++++++++++ |
| uce_m410_II_552958_552980 | II_552958_552980 | cluster_1 | D | 11 | 2 | 36 | +++++++++++AGACGTCCTCGATTATATGCTCC++ | ++GGAGCATATAATCGAGGACGTCT+++++++++++ |
| uce_m692_I_4118684_4118703 | I_4118684_4118703 | cluster_1 | D | 11 | 5 | 36 | +++++++++++AGCCAAGCGCTACATCTTGC+++++ | +++++GCAAGATGTAGCGCTTGGCT+++++++++++ |
| uce_m93_III_983283_983314 | III_983283_983314 | cluster_1 | R | 0 | 3 | 36 | TACCCAAGAACCAACAATCCAACAAAAGAGAGA+++ | +++TCTCTCTTTTGTTGGATTGTTGGTTCTTGGGTA |
| uce_m349_I_3874020_3874050 | I_3874020_3874050 | cluster_1 | R | 1 | 4 | 36 | +ATCCTTCCACATTCAAGTGAAGTATGATGAT++++ | ++++ATCATCATACTTCACTTGAATGTGGAAGGAT+ |