/var/www/html/rsat/public_html/tmp/www-data/2025/02/17/peak-motifs.2025-02-17.165620_2025-02-17.165620_kIvWOZ/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab 
 position-analysis -v 1 -i $RSAT/public_html/tmp/www-data/2025/02/17/peak-motifs.2025-02-17.165620_2025-02-17.165620_kIvWOZ/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta -format fasta -sort -return html,chi,sig,distrib,graphs,rank,index -max_graphs 20 -1str -ovlp -seqtype dna -l 2 -ci 20 -img_format png -title Peask07 -origin center -offset 0 -o $RSAT/public_html/tmp/www-data/2025/02/17/peak-motifs.2025-02-17.165620_2025-02-17.165620_kIvWOZ/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Citation: van Helden, et al. (2000).  Nucleic Acids Res 28, 1000-1010.
 Sequence file                	$RSAT/public_html/tmp/www-data/2025/02/17/peak-motifs.2025-02-17.165620_2025-02-17.165620_kIvWOZ/data/sequences/peak-motifs_test_maxlen1000_purged_ml40_mis3.fasta
 Sequence format              	fasta
 Sequence type                	dna
 Output file                  	$RSAT/public_html/tmp/www-data/2025/02/17/peak-motifs.2025-02-17.165620_2025-02-17.165620_kIvWOZ/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Oligo length                 	2
 Occurrences counted  on a single  strands
 Conditions of applicability checked.
 Background model estimation: homogeneous repartition
 Sequence statistics:
	Nb of sequences              	192
	Sum of sequence lengths      	69583
	Min sequence length          	0
	Max sequence length          	1000
	Average sequence length      	362
	Possible positions           	69391
 Oligonucleotide statistics:
	Total occurrences    	68541
 Position interval parameters:
	Position interval    	20
	Number of windows    	50
	Total positions      	69391
	Degrees of freedom   	49
 K-mer clustering parameters:
	Number of clusters   	0
	Clustering method    	complete
 Position intervals:
	window	[min,max]	mid	seq	occ
	1	-25	[-499,-480]	-489.5	9	180
	2	-24	[-479,-460]	-469.5	9	180
	3	-23	[-459,-440]	-449.5	11	202
	4	-22	[-439,-420]	-429.5	13	232
	5	-21	[-419,-400]	-409.5	16	263
	6	-20	[-399,-380]	-389.5	16	320
	7	-19	[-379,-360]	-369.5	20	384
	8	-18	[-359,-340]	-349.5	24	444
	9	-17	[-339,-320]	-329.5	28	504
	10	-16	[-319,-300]	-309.5	36	568
	11	-15	[-299,-280]	-289.5	36	720
	12	-14	[-279,-260]	-269.5	42	816
	13	-13	[-259,-240]	-249.5	45	873
	14	-12	[-239,-220]	-229.5	53	948
	15	-11	[-219,-200]	-209.5	60	1067
	16	-10	[-199,-180]	-189.5	60	1200
	17	-9	[-179,-160]	-169.5	74	1424
	18	-8	[-159,-140]	-149.5	94	1700
	19	-7	[-139,-120]	-129.5	120	2036
	20	-6	[-119,-100]	-109.5	158	2438
	21	-5	[-99,-80]	-89.5	158	3160
	22	-4	[-79,-60]	-69.5	192	3704
	23	-3	[-59,-40]	-49.5	192	3840
	24	-2	[-39,-20]	-29.5	192	3840
	25	-1	[-19,0]	-9.5	192	3840
	26	0	[1,20]	10.5	192	3840
	27	1	[21,40]	30.5	192	3840
	28	2	[41,60]	50.5	192	3840
	29	3	[61,80]	70.5	192	3636
	30	4	[81,100]	90.5	158	3122
	31	5	[101,120]	110.5	120	2400
	32	6	[121,140]	130.5	120	1984
	33	7	[141,160]	150.5	94	1660
	34	8	[161,180]	170.5	74	1396
	35	9	[181,200]	190.5	60	1193
	36	10	[201,220]	210.5	53	1060
	37	11	[221,240]	230.5	53	932
	38	12	[241,260]	250.5	45	867
	39	13	[261,280]	270.5	42	804
	40	14	[281,300]	290.5	36	712
	41	15	[301,320]	310.5	28	560
	42	16	[321,340]	330.5	28	496
	43	17	[341,360]	350.5	24	436
	44	18	[361,380]	370.5	20	376
	45	19	[381,400]	390.5	16	317
	46	20	[401,420]	410.5	13	260
	47	21	[421,440]	430.5	13	228
	48	22	[441,460]	450.5	11	198
	49	23	[461,480]	470.5	9	180
	50	24	[481,500]	490.5	9	171

 Column headers
	1	seq            	pattern sequence
	2	id             	pattern identifier
	3	occ            	pattern occurrences
	4	chi2           	observed chi-square
	5	df             	degrees of freedom
	6	Pval           	P-value (probability for one word to be a false positive)
	7	Eval           	E-value; expected number of false positives (Eval = Pval * nb_tests)
	8	sig            	Significance (sig = -log10(Eval))
	9	rank           	rank of the pattern according to sorting criterion
	10	-489.5         	occurrences in window	1	[-499,-480]
	11	-469.5         	occurrences in window	2	[-479,-460]
	12	-449.5         	occurrences in window	3	[-459,-440]
	13	-429.5         	occurrences in window	4	[-439,-420]
	14	-409.5         	occurrences in window	5	[-419,-400]
	15	-389.5         	occurrences in window	6	[-399,-380]
	16	-369.5         	occurrences in window	7	[-379,-360]
	17	-349.5         	occurrences in window	8	[-359,-340]
	18	-329.5         	occurrences in window	9	[-339,-320]
	19	-309.5         	occurrences in window	10	[-319,-300]
	20	-289.5         	occurrences in window	11	[-299,-280]
	21	-269.5         	occurrences in window	12	[-279,-260]
	22	-249.5         	occurrences in window	13	[-259,-240]
	23	-229.5         	occurrences in window	14	[-239,-220]
	24	-209.5         	occurrences in window	15	[-219,-200]
	25	-189.5         	occurrences in window	16	[-199,-180]
	26	-169.5         	occurrences in window	17	[-179,-160]
	27	-149.5         	occurrences in window	18	[-159,-140]
	28	-129.5         	occurrences in window	19	[-139,-120]
	29	-109.5         	occurrences in window	20	[-119,-100]
	30	-89.5          	occurrences in window	21	[-99,-80]
	31	-69.5          	occurrences in window	22	[-79,-60]
	32	-49.5          	occurrences in window	23	[-59,-40]
	33	-29.5          	occurrences in window	24	[-39,-20]
	34	-9.5           	occurrences in window	25	[-19,0]
	35	10.5           	occurrences in window	26	[1,20]
	36	30.5           	occurrences in window	27	[21,40]
	37	50.5           	occurrences in window	28	[41,60]
	38	70.5           	occurrences in window	29	[61,80]
	39	90.5           	occurrences in window	30	[81,100]
	40	110.5          	occurrences in window	31	[101,120]
	41	130.5          	occurrences in window	32	[121,140]
	42	150.5          	occurrences in window	33	[141,160]
	43	170.5          	occurrences in window	34	[161,180]
	44	190.5          	occurrences in window	35	[181,200]
	45	210.5          	occurrences in window	36	[201,220]
	46	230.5          	occurrences in window	37	[221,240]
	47	250.5          	occurrences in window	38	[241,260]
	48	270.5          	occurrences in window	39	[261,280]
	49	290.5          	occurrences in window	40	[281,300]
	50	310.5          	occurrences in window	41	[301,320]
	51	330.5          	occurrences in window	42	[321,340]
	52	350.5          	occurrences in window	43	[341,360]
	53	370.5          	occurrences in window	44	[361,380]
	54	390.5          	occurrences in window	45	[381,400]
	55	410.5          	occurrences in window	46	[401,420]
	56	430.5          	occurrences in window	47	[421,440]
	57	450.5          	occurrences in window	48	[441,460]
	58	470.5          	occurrences in window	49	[461,480]
	59	490.5          	occurrences in window	50	[481,500]
seq id occ chi2 df Pval Eval sig rank -489.5 -469.5 -449.5 -429.5 -409.5 -389.5 -369.5 -349.5 -329.5 -309.5 -289.5 -269.5 -249.5 -229.5 -209.5 -189.5 -169.5 -149.5 -129.5 -109.5 -89.5 -69.5 -49.5 -29.5 -9.5 10.5 30.5 50.5 70.5 90.5 110.5 130.5 150.5 170.5 190.5 210.5 230.5 250.5 270.5 290.5 310.5 330.5 350.5 370.5 390.5 410.5 430.5 450.5 470.5 490.5
gg gg 2726 82.8 49 1.8e-03 0.029 1.53 1 5 5 17 16 15 10 23 17 26 15 24 26 36 27 54 46 45 53 80 110 131 141 156 127 140 169 136 137 140 115 114 79 71 47 48 37 48 34 33 27 34 28 18 19 11 15 4 5 8 4
tt tt 7193 77.5 49 5.8e-03 0.093 1.03 2 20 22 22 22 18 25 42 48 55 62 66 75 87 112 122 116 153 210 229 270 294 292 409 439 401 423 371 432 357 308 262 222 158 160 119 97 106 92 90 73 50 44 46 45 32 24 13 18 18 22
aa aa 6299 69.8 49 2.7e-02 0.43 0.37 3 18 29 19 12 37 34 35 51 49 41 64 75 79 87 96 138 142 161 186 207 310 354 349 340 352 341 351 345 323 282 220 180 138 116 84 101 73 60 61 53 56 38 36 34 34 23 31 25 14 15
ac ac 3609 68.0 49 3.7e-02 0.6 0.22 4 15 8 3 7 15 16 20 21 25 31 39 51 54 65 55 67 63 93 94 130 181 220 205 193 190 187 196 183 193 157 111 91 92 71 56 67 50 52 48 21 22 17 27 19 20 17 21 13 4 13
ta ta 5681 67.2 49 4.3e-02 0.69 0.16 5 12 12 10 15 20 33 32 30 32 50 48 68 80 68 68 112 135 165 197 233 261 304 310 292 317 310 310 296 261 234 190 194 157 122 103 85 78 77 55 57 46 41 35 26 28 17 17 16 7 15
cc cc 2669 63.3 49 8.3e-02 1.3 -0.12 6 9 10 6 5 7 8 17 33 15 25 35 36 41 44 42 46 56 61 70 86 129 169 149 148 125 148 141 125 146 108 82 79 58 64 48 50 22 35 29 27 24 20 22 10 12 9 11 9 11 7
cg cg 1558 50.2 49 4.3e-01 6.8 -0.83 7 5 2 2 5 10 6 6 11 9 11 11 22 15 18 36 19 27 40 47 39 58 100 87 105 70 82 75 89 78 74 54 45 35 39 24 27 28 21 27 20 14 12 9 10 8 4 7 3 5 7
ag ag 3950 48.9 49 4.8e-01 7.7 -0.88 8 11 9 12 13 22 23 28 29 34 34 53 52 52 47 61 69 84 89 112 134 173 222 207 197 239 208 210 206 232 207 133 93 98 72 71 61 51 45 36 47 38 34 20 19 13 14 10 8 14 4
gt gt 3955 44.3 49 6.6e-01 11 -1.03 9 4 9 15 21 14 17 17 18 30 32 37 45 46 52 66 66 66 98 119 133 174 214 214 212 200 223 237 222 217 176 149 123 101 76 67 48 54 48 51 54 33 42 28 19 14 15 6 12 10 11
ca ca 4611 44.0 49 6.8e-01 11 -1.03 10 19 8 15 15 21 25 25 23 37 39 69 64 64 73 64 89 94 121 115 161 201 251 269 259 266 239 245 242 261 208 141 116 105 92 80 73 52 47 53 50 35 32 32 22 25 18 19 14 13 10
at at 6705 43.9 49 6.8e-01 11 -1.04 11 15 16 19 21 20 37 34 36 42 51 65 74 86 83 85 119 164 183 219 250 303 341 380 364 396 376 370 356 321 282 230 219 169 150 134 90 90 76 67 66 55 40 41 39 30 24 25 20 14 18
ct ct 4123 40.6 49 8.0e-01 13 -1.11 12 8 14 10 14 11 17 23 29 34 47 42 48 51 63 63 66 88 89 115 167 196 215 220 240 233 225 223 231 193 168 137 109 95 72 76 81 60 67 53 35 30 33 26 26 22 13 11 13 13 8
gc gc 2373 39.3 49 8.4e-01 13 -1.13 13 8 4 7 10 9 11 17 16 17 18 31 33 33 33 37 43 56 52 70 79 96 127 124 151 120 131 123 127 130 112 94 54 43 40 37 43 37 33 23 30 20 21 13 13 13 9 6 3 12 4
tc tc 4305 38.7 49 8.5e-01 14 -1.14 14 8 11 16 19 14 22 18 28 34 44 52 52 45 60 69 64 89 100 121 150 183 214 246 257 261 232 230 242 209 184 141 109 105 87 95 65 55 50 62 50 40 34 33 23 22 10 14 12 14 10
ga ga 3984 33.0 49 9.6e-01 15 -1.19 15 13 9 10 13 19 19 24 29 30 31 40 46 46 50 69 64 73 79 118 127 195 221 218 215 234 213 221 216 217 204 130 102 98 88 74 62 61 50 40 35 27 25 18 25 14 21 19 12 9 11
tg tg 4800 29.0 49 9.9e-01 16 -1.20 16 10 12 19 24 11 17 23 25 35 37 44 49 58 66 80 76 89 106 144 157 235 257 251 267 266 263 285 277 257 217 171 146 117 95 77 73 67 62 56 48 36 35 32 27 19 27 14 15 14 12 
 Host name	rsat
 Job started	2025-02-17.165623
 Job done	2025-02-17.165623
 Seconds	0.53
	user	0.53
	system	0.02
	cuser	0
;	csystem	0