; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/02/25/peak-motifs.2025-02-25.153813_2025-02-25.153813_MpHLQf/results/oligos_7nt_mkv1/peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/02/25/peak-motifs.2025-02-25.153813_2025-02-25.153813_MpHLQf/results/oligos_7nt_mkv1/peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/02/25/peak-motifs.2025-02-25.153813_2025-02-25.153813_MpHLQf/results/oligos_7nt_mkv1/peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/02/25/peak-motifs.2025-02-25.153813_2025-02-25.153813_MpHLQf/results/oligos_7nt_mkv1/peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/02/25/peak-motifs.2025-02-25.153813_2025-02-25.153813_MpHLQf/results/oligos_7nt_mkv1/peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	32	29	69	70	73	71	70	71	74	33	33
c	15	16	3	4	5	3	3	1	0	9	8
g	22	19	7	5	2	5	4	4	4	18	19
t	12	17	2	2	1	2	4	5	3	21	21
//
; Sites	81
>site_0
ACAAGAAAATT
>site_1
TTAAATAAATA
>site_2
CCAAAAGAAAG
>site_3
CAAAAGAAAGA
>site_4
AGAAAGAAAGA
>site_5
ACAAAGAAATA
>site_6
GAAAAATAATA
>site_7
CGAAAAATAAT
>site_8
AGGAAAAAAAT
>site_9
GGAAAAAAATC
>site_10
GAAAAAAATCA
>site_11
GGAAAAGAACA
>site_12
GCTAAAAAAAG
>site_13
CTAAAAAAAGA
>site_14
TAAAAAAAGAG
>site_15
AAAAAAAGAGC
>site_16
GAAAAGAAAGC
>site_17
TGAAAAGAAAG
>site_18
CCAAAACAAAA
>site_19
CAAAACAAAAC
>site_20
AAAACAAAACC
>site_21
TTAACAAAATG
>site_22
AAAAAACAATG
>site_23
AAAAAAACAAT
>site_24
GCAAAAAAACA
>site_25
TGCAAAAAAAC
>site_26
CCACAAAAATC
>site_27
TTATAAAAAGA
>site_28
ATAAAAAGATT
>site_29
ACAAAAATATG
>site_30
ATACAAAAATA
>site_31
AAAAAAATATA
>site_32
GAAAAAAATAT
>site_33
GGAAAAAAATA
>site_34
GGGAAAAAAAT
>site_35
CCAAAACAAAA
>site_36
CAAAACAAAAG
>site_37
AAAACAAAAGT
>site_38
GCAAAAAGACT
>site_39
GAAAAAAAGAT
>site_40
TGAAAAAAAGA
>site_41
ATGAAAAAAAG
>site_42
AGACAAAAATG
>site_43
CTAAAAATAGG
>site_44
CTAGAAAAAGA
>site_45
AGAAAAAGAAG
>site_46
GAAAAAGAAGT
>site_47
GGAACAAAAAG
>site_48
GAACAAAAAGG
>site_49
TTCAAAAAAGT
>site_50
TCAAAAAAGTA
>site_51
GTAACAAAAGT
>site_52
ACAAAATAATT
>site_53
ATAAAATAAGA
>site_54
AGAAGAAAACC
>site_55
AAAAAAAAATT
>site_56
GAAAAAAAAAT
>site_57
AGAAAAAAAAA
>site_58
TAGAAAAAAAA
>site_59
GTAGAAAAAAA
>site_60
AGAAAAAAATG
>site_61
CAGAAAAAAAT
>site_62
TCAGAAAAAAA
>site_63
ATAAAGAAACA
>site_64
AAAAATAAAGA
>site_65
AAAAAATAAAG
>site_66
AAAAAAATAAA
>site_67
GAAAAAAATAA
>site_68
CGAAAAAAATA
>site_69
GCGAAAAAAAT
>site_70
ACAGAAAAACG
>site_71
AGAAAAAAATT
>site_72
GAGAAAAAAAT
>site_73
AGAGAAAAAAA
>site_74
CTCAAAAAATT
>site_75
TAAAAAAAGGA
>site_76
ATAAAAAAAGG
>site_77
AATAAAAAAAG
>site_78
CAATAAAAAAA
>site_79
ACAATAAAAAA
>site_80
GTAAACAAACA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/25/peak-motifs.2025-02-25.153813_2025-02-25.153813_MpHLQf/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/25/peak-motifs.2025-02-25.153813_2025-02-25.153813_MpHLQf/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m1_rc.png
;
a	4	6	0	2	0	0	2	0	0	6	1
c	8	6	21	18	21	0	20	23	0	8	10
g	10	5	2	2	2	23	0	0	23	3	7
t	1	6	0	1	0	0	1	0	0	6	5
//
; Sites	23
>site_0
TACCCGACGTT
>site_1
ACGCCGCCGCG
>site_2
GGCCCGCCGTG
>site_3
CGCTCGCCGTC
>site_4
CTGCCGCCGAC
>site_5
AGCCCGCCGAT
>site_6
CTCCCGCCGCG
>site_7
CGCCGGCCGAC
>site_8
CCCCCGCCGGC
>site_9
CCCCCGCCGCT
>site_10
GACCGGCCGGG
>site_11
GACCCGCCGGG
>site_12
CACGCGCCGAG
>site_13
ACCCCGCCGTC
>site_14
GACCCGTCGCC
>site_15
GCCCCGCCGTC
>site_16
GTCCCGCCGCC
>site_17
GGCCCGCCGCC
>site_18
GCCACGCCGAC
>site_19
GTCGCGCCGCT
>site_20
CTCCCGACGTT
>site_21
GACACGCCGAG
>site_22
ATCCCGCCGCA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/25/peak-motifs.2025-02-25.153813_2025-02-25.153813_MpHLQf/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/25/peak-motifs.2025-02-25.153813_2025-02-25.153813_MpHLQf/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m2_rc.png
;
a	1	5	2	0	0	0	0	0	0	4	5	3
c	12	7	19	25	0	24	20	1	23	2	4	13
g	4	5	3	0	0	0	5	1	1	7	8	3
t	8	8	1	0	25	1	0	23	1	12	8	6
//
; Sites	25
>site_0
GGGCTCCTCTCT
>site_1
CCCCTCCTCCTT
>site_2
CTCCTCCTTTGC
>site_3
TGCCTCCCCTGC
>site_4
TTCCTCCTCGTC
>site_5
CTCCTCGTCACT
>site_6
CACCTCCTCCAC
>site_7
TCCCTCCTCTCC
>site_8
CGCCTCCTCTAC
>site_9
GCGCTCCTCTGC
>site_10
CCCCTCCTCGTG
>site_11
TACCTCGTCATA
>site_12
GTTCTCCTCTGT
>site_13
GTACTCCTCTTG
>site_14
CGCCTCCTCGGC
>site_15
TCACTCCTCGTC
>site_16
CTCCTCGTCGTC
>site_17
TACCTCCTGAAT
>site_18
CCCCTCGTCTCC
>site_19
CACCTCCTCGGC
>site_20
TTCCTCCTCAAT
>site_21
TGCCTTCTCTAG
>site_22
CTGCTCCTCTGA
>site_23
CCCCTCCGCTTC
>site_24
AACCTCGTCGGA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/25/peak-motifs.2025-02-25.153813_2025-02-25.153813_MpHLQf/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/25/peak-motifs.2025-02-25.153813_2025-02-25.153813_MpHLQf/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m3_rc.png
;
a	6	8	0	0	2	0	0	1	1	6	6
c	15	15	44	7	5	44	4	2	44	12	14
g	21	11	2	38	4	1	41	4	1	23	13
t	4	12	0	1	35	1	1	39	0	5	13
//
; Sites	46
>site_0
ACCGTCTTCCT
>site_1
CTCCTCGTCAC
>site_2
GGCGTCGGCGT
>site_3
GTCGGCGTCGC
>site_4
GGCGTCGCCTG
>site_5
GCCGTCGTCCG
>site_6
CGCGGCGTCAC
>site_7
GACGTCGTCGG
>site_8
GACGACGTCGC
>site_9
CGCGACGTCGT
>site_10
TACCTCGTCAT
>site_11
CTCGCCGTCGG
>site_12
GCCGTCGGCGG
>site_13
GCCGTTGTCTT
>site_14
CAGGTCGTCCT
>site_15
GTCGTCCTCAA
>site_16
GCCGGCGTCGT
>site_17
GGCGTCGTCGT
>site_18
GTCGTCGTGGG
>site_19
TCCGTCGTCGT
>site_20
GTCGTCGTCGA
>site_21
GTCGTCGACCA
>site_22
CTCCTCGTCGT
>site_23
CTCGTCGTCGT
>site_24
GTCGTCGTCGG
>site_25
GTCGTCGGCCG
>site_26
CCCGTCCTCAC
>site_27
CGCGTCGTAAC
>site_28
CCCCTCGTCTC
>site_29
TCGGTCGTCCC
>site_30
GCCGCCGTCCA
>site_31
CCCGCCGTCGT
>site_32
GCCGTCGTCGC
>site_33
CCCGTCGCCGC
>site_34
CCCGCCGTCCC
>site_35
CGCGTCCTCGG
>site_36
GGCCTCGTCCC
>site_37
AACGTCCTCCT
>site_38
GGCGCCGTCCA
>site_39
CGCGTCGTCTG
>site_40
AACGTGGTCCG
>site_41
GGCCTCGTCGA
>site_42
AACTTCGTCGG
>site_43
TTCGTCGGCGC
>site_44
AACCTCGTCGG
>site_45
ACCGGCGTCTC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/25/peak-motifs.2025-02-25.153813_2025-02-25.153813_MpHLQf/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/25/peak-motifs.2025-02-25.153813_2025-02-25.153813_MpHLQf/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m4_rc.png
;
a	10	5	2	17	0	0	18	0	0	13	3	4
c	0	5	2	0	4	0	0	14	0	2	7	3
g	3	5	2	0	14	0	0	3	0	1	4	1
t	5	3	12	1	0	18	0	1	18	2	4	10
//
; Sites	18
>site_0
TACTGTACTACG
>site_1
TACAGTACTAGC
>site_2
GCTAGTACTGTA
>site_3
TAAAGTACTAGT
>site_4
ACTAGTACTTTA
>site_5
AGTACTAGTACT
>site_6
AGTACTAGTACT
>site_7
ACTAGTACTCCA
>site_8
TGGAGTACTAGT
>site_9
ACTACTATTACT
>site_10
AATAGTAGTAGC
>site_11
GCTACTACTATT
>site_12
AGGAGTACTACA
>site_13
TGTAGTACTCCT
>site_14
ATTAGTACTAAT
>site_15
ATTAGTACTAAT
>site_16
GTTAGTACTTTT
>site_17
AAAAGTACTAAC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/25/peak-motifs.2025-02-25.153813_2025-02-25.153813_MpHLQf/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/02/25/peak-motifs.2025-02-25.153813_2025-02-25.153813_MpHLQf/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2025-02-25.153826
; Job done	2025-02-25.153828
; Seconds	0.14
;	user	0.14
;	system	0.05
;	cuser	1.25
;	csystem	0.16
