; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/03/02/peak-motifs.2025-03-02.091145_2025-03-02.091145_IYXNXa/results/dyads/peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o $RSAT/public_html/tmp/www-data/2025/03/02/peak-motifs.2025-03-02.091145_2025-03-02.091145_IYXNXa/results/dyads/peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/03/02/peak-motifs.2025-03-02.091145_2025-03-02.091145_IYXNXa/results/dyads/peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/03/02/peak-motifs.2025-03-02.091145_2025-03-02.091145_IYXNXa/results/dyads/peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	8	16	1	0	25	17	10	10	0	3	28	5	11
c	12	2	1	27	0	2	8	2	1	0	0	13	6
g	3	7	26	1	0	8	8	4	27	24	0	3	3
t	5	3	0	0	3	1	2	12	0	1	0	7	8
//
; Sites	28
>site_0
CGGCACGAGTACC
>site_1
GCGCAGGCGGATG
>site_2
ACGGAGCAGGACA
>site_3
AGGCAGAAGGAAG
>site_4
CACCACGGGGAGT
>site_5
AAGCAAAGGGATT
>site_6
TAGCTAGAGGACC
>site_7
CAGCAACTGAACA
>site_8
CGGCAACTGGACA
>site_9
AAGCAAAGGGATT
>site_10
TAGCTAGAGGACC
>site_11
CAGCAACTGAACA
>site_12
CGGCAACTGGACA
>site_13
AAGCAAAGGGATT
>site_14
TAGCTAGAGGACC
>site_15
CAGCAACTGAACA
>site_16
CGGCAACTGGACA
>site_17
GAACAGACGGACC
>site_18
AAGCAAGAGGAAA
>site_19
CTGCAAATGGAGA
>site_20
CTGCAAATGGAGA
>site_21
GAGCAGATGGATT
>site_22
TTGCATGTGGAAG
>site_23
AGGCAGCTGGACT
>site_24
TAGCAGTACGATA
>site_25
CAGCAATAGGAAC
>site_26
CAGCAGATGGAAT
>site_27
AGGCAAAAGGATT
a	13	15	0	1	26	9	9	4	10	15	4	13	9	5	13	0	0	29	11	10
c	11	9	3	0	5	11	4	16	6	4	9	4	7	10	8	31	0	1	8	6
g	6	5	24	30	0	4	8	2	6	5	10	10	3	7	7	0	31	1	5	11
t	1	2	4	0	0	7	10	9	9	7	8	4	12	9	3	0	0	0	7	4
//
; Sites	31
>site_0
AAGGAAATATTTTTACGAAA
>site_1
GCGGATGAGATAGTCCGGTC
>site_2
CAGGAGTTTACAACCCGAAG
>site_3
GAGGAACACCGGTGGCGAAG
>site_4
CCTGACTCTGATACACGAAA
>site_5
CACGACACGAGCTGACGACA
>site_6
AGGGAAGCAAGACCGCGAGG
>site_7
ACGGCTACCTTGTTACGACT
>site_8
CAGGAGTTTACAACCCGAAG
>site_9
GAGGAACACCGGTGGCGAAG
>site_10
CCTGACTCTGATACACGAAA
>site_11
CACGACACGAGCTGACGACA
>site_12
AGGGAAGCAAGACCGCGAGG
>site_13
ACGGCTACCTTGTTACGACT
>site_14
CAGGAGTTTACAACCCGAAG
>site_15
GAGGAACACCGGTGGCGAAG
>site_16
CCTGACTCTGATACACGAAA
>site_17
CACGACACGAGCTGACGACA
>site_18
AGGGAAGCAAGACCGCGAGG
>site_19
ACGGCTACCTTGTTACGACT
>site_20
ATGGACTCTTGGGCTCGATC
>site_21
CAGGATGCGATGAGCCGACA
>site_22
CTGGATTTGAACCAGCGACC
>site_23
AAGGCCGCAACACACCGATG
>site_24
AAGGCCGCAACACACCGATG
>site_25
AGGGAATGTTCGTATCGCTA
>site_26
TCGGACATAGCGATACGAAC
>site_27
AGGGAAAGAATATTTCGAGT
>site_28
GCTGAGGTATTACAACGAGC
>site_29
GAGAACCTAGCAGTACGATA
>site_30
AAGGATTTTCCAATCCGATC
a	5	12	30	0	0	9	9	5	5	8	9	8	6	15	1	13	5	17	2	6	16	6	15	7	7	0	29	1	6	12
c	7	13	6	37	35	6	7	12	18	6	11	12	13	11	11	4	15	2	14	13	6	8	5	7	12	34	0	1	5	3
g	9	1	0	0	1	7	9	13	5	4	4	4	10	6	12	9	1	12	7	9	12	9	15	13	8	0	7	35	8	14
t	16	11	1	0	1	15	12	7	9	19	13	13	8	5	13	11	16	6	14	9	3	14	2	10	10	3	1	0	18	8
//
; Sites	37
>site_0
GCACCGTACGTCTTTGCAAAGACACCACCA
>site_1
CCACCGAGCGCTCCCAGGTGGAGTCCAGCA
>site_2
GTACCGACCGGACTATCTCATCCGCCTGCG
>site_3
TAACCTCCTACACACCCTTTACGCCCAGTA
>site_4
GTACCTGACTCTGATACACGAAAGCTAGGG
>site_5
TCCCCTAGCTTTCGTGTATCAGAGTCAGGT
>site_6
ATACCCCGGTAGTCCTAGCCGTAAACGGTG
>site_7
TTACCAGGCCTTGACATGCCGTGTTCAGTT
>site_8
TCCCCGTTATACGAGGCAGTCTGTTCAGAG
>site_9
CCACCTTCCTCCCCGTTATACGAGGCAGTC
>site_10
CAACCAGCTTTCAGGATGTGACGGGCGGTG
>site_11
TAACCTCCTACACACCCTTTACGCCCAGTA
>site_12
GTACCTGACTCTGATACACGAAAGCTAGGG
>site_13
TCCCCTAGCTTTCGTGTATCAGAGTCAGGT
>site_14
ATACCCCGGTAGTCCTAGCCGTAAACGGTG
>site_15
TTACCAGGCCTTGACATGCCGTGTTCAGTT
>site_16
TCCCCGTTATACGAGGCAGTCTGTTCAGAG
>site_17
CCACCTTCCTCCCCGTTATACGAGGCAGTC
>site_18
CAACCAGCTTTCAGGATGTGACGGGCGGTG
>site_19
TAACCTCCTACACACCCTTTACGCCCAGTA
>site_20
GTACCTGACTCTGATACACGAAAGCTAGGG
>site_21
TCCCCTAGCTTTCGTGTATCAGAGTCAGGT
>site_22
ATACCCCGGTAGTCCTAGCCGTAAACGGTG
>site_23
TTACCAGGCCTTGACATGCCGTGTTCAGTT
>site_24
TCCCCGTTATACGAGGCAGTCTGTTCAGAG
>site_25
CCACCTTCCTCCCCGTTATACGAGGCAGTC
>site_26
CAACCAGCTTTCAGGATGTGACGGGCGGTG
>site_27
GGACCCTTGGGACCTTCTCCAGCCCCAGGA
>site_28
GAACTGTCTCACGACGTTCTGAACCCAGCT
>site_29
GAACCCCTCAGATCTCCAGCGCCCACAGTG
>site_30
TAACCATCTTAATATGTGTTATTATCGGAA
>site_31
ACACGTTTCCATATTACCCCGTTTACAGGA
>site_32
TAACCTAATATAAATTAGGCAGATCCAGTA
>site_33
TTACCCAGAATGCCTAACGATGAAACAGCT
>site_34
TAACCAATACCTTTGTTACGATGCGCAGAA
>site_35
ACTCCATGGATCTTGTCAGGGTGTACAGAA
>site_36
GAACCTAGCAGTACGATAATTTCAGCAATA
; Host name	rsat
; Job started	2025-03-02.091200
; Job done	2025-03-02.091200
; Seconds	0.1
;	user	0.1
;	system	0.02
;	cuser	0
;	csystem	0
