AC  oligos_6nt_mkv2_m1
XX
ID  oligos_6nt_mkv2_m1
XX
DE  daAAAGAArw
P0           a         c         g         t
1           11         4        10        11
2           15         7         7         7
3           36         0         0         0
4           36         0         0         0
5           36         0         0         0
6            0         0        36         0
7           36         0         0         0
8           36         0         0         0
9           15         5         9         7
10          14         6         5        11
XX
BA  36 sequences
XX
BS  TCAAAGAAGT; site_0; 1; 10; 0; p
BS  GAAAAGAACT; site_1; 1; 10; 0; p
BS  GTAAAGAAAC; site_2; 1; 10; 0; p
BS  GAAAAGAACT; site_3; 1; 10; 0; p
BS  GTAAAGAAAC; site_4; 1; 10; 0; p
BS  GAAAAGAATA; site_5; 1; 10; 0; p
BS  AAAAAGAAAA; site_6; 1; 10; 0; p
BS  TCAAAGAAAT; site_7; 1; 10; 0; p
BS  TCAAAGAAAT; site_8; 1; 10; 0; p
BS  TCAAAGAAAT; site_9; 1; 10; 0; p
BS  AAAAAGAAGG; site_10; 1; 10; 0; p
BS  CCAAAGAAAG; site_11; 1; 10; 0; p
BS  GGAAAGAAAA; site_12; 1; 10; 0; p
BS  TTAAAGAAGT; site_13; 1; 10; 0; p
BS  AGAAAGAATT; site_14; 1; 10; 0; p
BS  GGAAAGAAAA; site_15; 1; 10; 0; p
BS  TTAAAGAAGT; site_16; 1; 10; 0; p
BS  AGAAAGAATT; site_17; 1; 10; 0; p
BS  TCAAAGAAGC; site_18; 1; 10; 0; p
BS  CTAAAGAACT; site_19; 1; 10; 0; p
BS  AAAAAGAACA; site_20; 1; 10; 0; p
BS  AAAAAGAAAG; site_21; 1; 10; 0; p
BS  GGAAAGAAAA; site_22; 1; 10; 0; p
BS  AAAAAGAACA; site_23; 1; 10; 0; p
BS  AAAAAGAAAG; site_24; 1; 10; 0; p
BS  GGAAAGAAAA; site_25; 1; 10; 0; p
BS  AAAAAGAATA; site_26; 1; 10; 0; p
BS  TTAAAGAAGC; site_27; 1; 10; 0; p
BS  AAAAAGAAAA; site_28; 1; 10; 0; p
BS  CCAAAGAAGC; site_29; 1; 10; 0; p
BS  TAAAAGAATA; site_30; 1; 10; 0; p
BS  GGAAAGAATA; site_31; 1; 10; 0; p
BS  AAAAAGAATA; site_32; 1; 10; 0; p
BS  TTAAAGAAAA; site_33; 1; 10; 0; p
BS  CAAAAGAAGC; site_34; 1; 10; 0; p
BS  TAAAAGAAGG; site_35; 1; 10; 0; p
CC  program: feature
CC  matrix.nb: 1
CC  matrix.nb: 1
CC  sites: 36
CC  consensus.strict: aaAAAGAAaa
CC  consensus.strict.rc: TTTTCTTTTT
CC  consensus.IUPAC: daAAAGAArw
CC  consensus.IUPAC.rc: WYTTCTTTTH
CC  consensus.regexp: [agt]aAAAGAA[ag][at]
CC  consensus.regexp.rc: [AT][CT]TTCTTTT[ACT]
XX
//
AC  oligos_7nt_mkv2_m1
XX
ID  oligos_7nt_mkv2_m1
XX
DE  kyCGGCAACbt
P0           a         c         g         t
1            3         3        11        25
2            8        11         9        14
3            0        41         0         1
4            4         6        29         3
5            3         3        36         0
6            0        39         3         0
7           39         0         0         3
8           39         0         2         1
9            3        39         0         0
10           5        11        12        14
11           8         9         9        16
XX
BA  42 sequences
XX
BS  GGCCGCAACTT; site_0; 1; 11; 0; p
BS  TTCGGCAACAT; site_1; 1; 11; 0; p
BS  TTCGGCAACAT; site_2; 1; 11; 0; p
BS  GACGGCAAACT; site_3; 1; 11; 0; p
BS  TCCGCCAACGC; site_4; 1; 11; 0; p
BS  TTCAGCAACTG; site_5; 1; 11; 0; p
BS  TCCCGCAACGA; site_6; 1; 11; 0; p
BS  TTCGGCAACTG; site_7; 1; 11; 0; p
BS  GGCTGCAACTC; site_8; 1; 11; 0; p
BS  CCCGGGAACGT; site_9; 1; 11; 0; p
BS  TTCGACAACCT; site_10; 1; 11; 0; p
BS  TACGGCTACCT; site_11; 1; 11; 0; p
BS  GACGGCAAACT; site_12; 1; 11; 0; p
BS  TCCGCCAACGC; site_13; 1; 11; 0; p
BS  TTCAGCAACTG; site_14; 1; 11; 0; p
BS  TCCCGCAACGA; site_15; 1; 11; 0; p
BS  TTCGGCAACTG; site_16; 1; 11; 0; p
BS  GGCTGCAACTC; site_17; 1; 11; 0; p
BS  CCCGGGAACGT; site_18; 1; 11; 0; p
BS  TTCGACAACCT; site_19; 1; 11; 0; p
BS  TACGGCTACCT; site_20; 1; 11; 0; p
BS  GACGGCAAACT; site_21; 1; 11; 0; p
BS  TCCGCCAACGC; site_22; 1; 11; 0; p
BS  TTCAGCAACTG; site_23; 1; 11; 0; p
BS  TCCCGCAACGA; site_24; 1; 11; 0; p
BS  TTCGGCAACTG; site_25; 1; 11; 0; p
BS  GGCTGCAACTC; site_26; 1; 11; 0; p
BS  CCCGGGAACGT; site_27; 1; 11; 0; p
BS  TTCGACAACCT; site_28; 1; 11; 0; p
BS  TACGGCTACCT; site_29; 1; 11; 0; p
BS  TTCGGCATCCT; site_30; 1; 11; 0; p
BS  ATCGGCAACTG; site_31; 1; 11; 0; p
BS  TGCGGCAGCGA; site_32; 1; 11; 0; p
BS  TCCGGCAACTA; site_33; 1; 11; 0; p
BS  GGCCGCAACAC; site_34; 1; 11; 0; p
BS  ATCGGCAACTG; site_35; 1; 11; 0; p
BS  TGCGGCAGCGA; site_36; 1; 11; 0; p
BS  TCCGGCAACTA; site_37; 1; 11; 0; p
BS  GGCCGCAACAC; site_38; 1; 11; 0; p
BS  GATGGCAACAG; site_39; 1; 11; 0; p
BS  GACAGCAACCA; site_40; 1; 11; 0; p
BS  AGCGGCAACGC; site_41; 1; 11; 0; p
CC  program: feature
CC  matrix.nb: 1
CC  matrix.nb: 1
CC  sites: 42
CC  consensus.strict: ttCGGCAACtt
CC  consensus.strict.rc: AAGTTGCCGAA
CC  consensus.IUPAC: kyCGGCAACbt
CC  consensus.IUPAC.rc: AVGTTGCCGRM
CC  consensus.regexp: [gt][ct]CGGCAAC[cgt]t
CC  consensus.regexp.rc: A[ACG]GTTGCCG[AG][AC]
XX
//
AC  dyads_m1
XX
ID  dyads_m1
XX
DE  mrGCArvwGGAyw
P0           a         c         g         t
1            8        12         3         5
2           16         2         7         3
3            1         1        26         0
4            0        27         1         0
5           25         0         0         3
6           17         2         8         1
7           10         8         8         2
8           10         2         4        12
9            0         1        27         0
10           3         0        24         1
11          28         0         0         0
12           5        13         3         7
13          11         6         3         8
XX
BA  28 sequences
XX
BS  CGGCACGAGTACC; site_0; 1; 13; 0; p
BS  GCGCAGGCGGATG; site_1; 1; 13; 0; p
BS  ACGGAGCAGGACA; site_2; 1; 13; 0; p
BS  AGGCAGAAGGAAG; site_3; 1; 13; 0; p
BS  CACCACGGGGAGT; site_4; 1; 13; 0; p
BS  AAGCAAAGGGATT; site_5; 1; 13; 0; p
BS  TAGCTAGAGGACC; site_6; 1; 13; 0; p
BS  CAGCAACTGAACA; site_7; 1; 13; 0; p
BS  CGGCAACTGGACA; site_8; 1; 13; 0; p
BS  AAGCAAAGGGATT; site_9; 1; 13; 0; p
BS  TAGCTAGAGGACC; site_10; 1; 13; 0; p
BS  CAGCAACTGAACA; site_11; 1; 13; 0; p
BS  CGGCAACTGGACA; site_12; 1; 13; 0; p
BS  AAGCAAAGGGATT; site_13; 1; 13; 0; p
BS  TAGCTAGAGGACC; site_14; 1; 13; 0; p
BS  CAGCAACTGAACA; site_15; 1; 13; 0; p
BS  CGGCAACTGGACA; site_16; 1; 13; 0; p
BS  GAACAGACGGACC; site_17; 1; 13; 0; p
BS  AAGCAAGAGGAAA; site_18; 1; 13; 0; p
BS  CTGCAAATGGAGA; site_19; 1; 13; 0; p
BS  CTGCAAATGGAGA; site_20; 1; 13; 0; p
BS  GAGCAGATGGATT; site_21; 1; 13; 0; p
BS  TTGCATGTGGAAG; site_22; 1; 13; 0; p
BS  AGGCAGCTGGACT; site_23; 1; 13; 0; p
BS  TAGCAGTACGATA; site_24; 1; 13; 0; p
BS  CAGCAATAGGAAC; site_25; 1; 13; 0; p
BS  CAGCAGATGGAAT; site_26; 1; 13; 0; p
BS  AGGCAAAAGGATT; site_27; 1; 13; 0; p
CC  program: feature
CC  matrix.nb: 1
CC  matrix.nb: 1
CC  sites: 28
CC  consensus.strict: caGCAaatGGAca
CC  consensus.strict.rc: TGTCCATTTGCTG
CC  consensus.IUPAC: mrGCArvwGGAyw
CC  consensus.IUPAC.rc: WRTCCWBYTGCYK
CC  consensus.regexp: [ac][ag]GCA[ag][acg][at]GGA[ct][at]
CC  consensus.regexp.rc: [AT][AG]TCC[AT][CGT][CT]TGC[CT][GT]
XX
//
AC  dyads_m2
XX
ID  dyads_m2
XX
DE  mmGGAmdywabrwymCGAmr
P0           a         c         g         t
1           13        11         6         1
2           15         9         5         2
3            0         3        24         4
4            1         0        30         0
5           26         5         0         0
6            9        11         4         7
7            9         4         8        10
8            4        16         2         9
9           10         6         6         9
10          15         4         5         7
11           4         9        10         8
12          13         4        10         4
13           9         7         3        12
14           5        10         7         9
15          13         8         7         3
16           0        31         0         0
17           0         0        31         0
18          29         1         1         0
19          11         8         5         7
20          10         6        11         4
XX
BA  31 sequences
XX
BS  AAGGAAATATTTTTACGAAA; site_0; 1; 20; 0; p
BS  GCGGATGAGATAGTCCGGTC; site_1; 1; 20; 0; p
BS  CAGGAGTTTACAACCCGAAG; site_2; 1; 20; 0; p
BS  GAGGAACACCGGTGGCGAAG; site_3; 1; 20; 0; p
BS  CCTGACTCTGATACACGAAA; site_4; 1; 20; 0; p
BS  CACGACACGAGCTGACGACA; site_5; 1; 20; 0; p
BS  AGGGAAGCAAGACCGCGAGG; site_6; 1; 20; 0; p
BS  ACGGCTACCTTGTTACGACT; site_7; 1; 20; 0; p
BS  CAGGAGTTTACAACCCGAAG; site_8; 1; 20; 0; p
BS  GAGGAACACCGGTGGCGAAG; site_9; 1; 20; 0; p
BS  CCTGACTCTGATACACGAAA; site_10; 1; 20; 0; p
BS  CACGACACGAGCTGACGACA; site_11; 1; 20; 0; p
BS  AGGGAAGCAAGACCGCGAGG; site_12; 1; 20; 0; p
BS  ACGGCTACCTTGTTACGACT; site_13; 1; 20; 0; p
BS  CAGGAGTTTACAACCCGAAG; site_14; 1; 20; 0; p
BS  GAGGAACACCGGTGGCGAAG; site_15; 1; 20; 0; p
BS  CCTGACTCTGATACACGAAA; site_16; 1; 20; 0; p
BS  CACGACACGAGCTGACGACA; site_17; 1; 20; 0; p
BS  AGGGAAGCAAGACCGCGAGG; site_18; 1; 20; 0; p
BS  ACGGCTACCTTGTTACGACT; site_19; 1; 20; 0; p
BS  ATGGACTCTTGGGCTCGATC; site_20; 1; 20; 0; p
BS  CAGGATGCGATGAGCCGACA; site_21; 1; 20; 0; p
BS  CTGGATTTGAACCAGCGACC; site_22; 1; 20; 0; p
BS  AAGGCCGCAACACACCGATG; site_23; 1; 20; 0; p
BS  AAGGCCGCAACACACCGATG; site_24; 1; 20; 0; p
BS  AGGGAATGTTCGTATCGCTA; site_25; 1; 20; 0; p
BS  TCGGACATAGCGATACGAAC; site_26; 1; 20; 0; p
BS  AGGGAAAGAATATTTCGAGT; site_27; 1; 20; 0; p
BS  GCTGAGGTATTACAACGAGC; site_28; 1; 20; 0; p
BS  GAGAACCTAGCAGTACGATA; site_29; 1; 20; 0; p
BS  AAGGATTTTCCAATCCGATC; site_30; 1; 20; 0; p
CC  program: feature
CC  matrix.nb: 2
CC  matrix.nb: 2
CC  sites: 31
CC  consensus.strict: aaGGActcaagatcaCGAag
CC  consensus.strict.rc: CTTCGTGATCTTGAGTCCTT
CC  consensus.IUPAC: mmGGAmdywabrwymCGAmr
CC  consensus.IUPAC.rc: YKTCGKRWYVTWRHKTCCKK
CC  consensus.regexp: [ac][ac]GGA[ac][agt][ct][at]a[cgt][ag][at][ct][ac]CGA[ac][ag]
CC  consensus.regexp.rc: [CT][GT]TCG[GT][AG][AT][CT][ACG]T[AT][AG][ACT][GT]TCC[GT][GT]
XX
//
AC  dyads_m3
XX
ID  dyads_m3
XX
DE  thACCttsctyysmbwyrycrtrkyCAGtr
P0           a         c         g         t
1            5         7         9        16
2           12        13         1        11
3           30         6         0         1
4            0        37         0         0
5            0        35         1         1
6            9         6         7        15
7            9         7         9        12
8            5        12        13         7
9            5        18         5         9
10           8         6         4        19
11           9        11         4        13
12           8        12         4        13
13           6        13        10         8
14          15        11         6         5
15           1        11        12        13
16          13         4         9        11
17           5        15         1        16
18          17         2        12         6
19           2        14         7        14
20           6        13         9         9
21          16         6        12         3
22           6         8         9        14
23          15         5        15         2
24           7         7        13        10
25           7        12         8        10
26           0        34         0         3
27          29         0         7         1
28           1         1        35         0
29           6         5         8        18
30          12         3        14         8
XX
BA  37 sequences
XX
BS  GCACCGTACGTCTTTGCAAAGACACCACCA; site_0; 1; 30; 0; p
BS  CCACCGAGCGCTCCCAGGTGGAGTCCAGCA; site_1; 1; 30; 0; p
BS  GTACCGACCGGACTATCTCATCCGCCTGCG; site_2; 1; 30; 0; p
BS  TAACCTCCTACACACCCTTTACGCCCAGTA; site_3; 1; 30; 0; p
BS  GTACCTGACTCTGATACACGAAAGCTAGGG; site_4; 1; 30; 0; p
BS  TCCCCTAGCTTTCGTGTATCAGAGTCAGGT; site_5; 1; 30; 0; p
BS  ATACCCCGGTAGTCCTAGCCGTAAACGGTG; site_6; 1; 30; 0; p
BS  TTACCAGGCCTTGACATGCCGTGTTCAGTT; site_7; 1; 30; 0; p
BS  TCCCCGTTATACGAGGCAGTCTGTTCAGAG; site_8; 1; 30; 0; p
BS  CCACCTTCCTCCCCGTTATACGAGGCAGTC; site_9; 1; 30; 0; p
BS  CAACCAGCTTTCAGGATGTGACGGGCGGTG; site_10; 1; 30; 0; p
BS  TAACCTCCTACACACCCTTTACGCCCAGTA; site_11; 1; 30; 0; p
BS  GTACCTGACTCTGATACACGAAAGCTAGGG; site_12; 1; 30; 0; p
BS  TCCCCTAGCTTTCGTGTATCAGAGTCAGGT; site_13; 1; 30; 0; p
BS  ATACCCCGGTAGTCCTAGCCGTAAACGGTG; site_14; 1; 30; 0; p
BS  TTACCAGGCCTTGACATGCCGTGTTCAGTT; site_15; 1; 30; 0; p
BS  TCCCCGTTATACGAGGCAGTCTGTTCAGAG; site_16; 1; 30; 0; p
BS  CCACCTTCCTCCCCGTTATACGAGGCAGTC; site_17; 1; 30; 0; p
BS  CAACCAGCTTTCAGGATGTGACGGGCGGTG; site_18; 1; 30; 0; p
BS  TAACCTCCTACACACCCTTTACGCCCAGTA; site_19; 1; 30; 0; p
BS  GTACCTGACTCTGATACACGAAAGCTAGGG; site_20; 1; 30; 0; p
BS  TCCCCTAGCTTTCGTGTATCAGAGTCAGGT; site_21; 1; 30; 0; p
BS  ATACCCCGGTAGTCCTAGCCGTAAACGGTG; site_22; 1; 30; 0; p
BS  TTACCAGGCCTTGACATGCCGTGTTCAGTT; site_23; 1; 30; 0; p
BS  TCCCCGTTATACGAGGCAGTCTGTTCAGAG; site_24; 1; 30; 0; p
BS  CCACCTTCCTCCCCGTTATACGAGGCAGTC; site_25; 1; 30; 0; p
BS  CAACCAGCTTTCAGGATGTGACGGGCGGTG; site_26; 1; 30; 0; p
BS  GGACCCTTGGGACCTTCTCCAGCCCCAGGA; site_27; 1; 30; 0; p
BS  GAACTGTCTCACGACGTTCTGAACCCAGCT; site_28; 1; 30; 0; p
BS  GAACCCCTCAGATCTCCAGCGCCCACAGTG; site_29; 1; 30; 0; p
BS  TAACCATCTTAATATGTGTTATTATCGGAA; site_30; 1; 30; 0; p
BS  ACACGTTTCCATATTACCCCGTTTACAGGA; site_31; 1; 30; 0; p
BS  TAACCTAATATAAATTAGGCAGATCCAGTA; site_32; 1; 30; 0; p
BS  TTACCCAGAATGCCTAACGATGAAACAGCT; site_33; 1; 30; 0; p
BS  TAACCAATACCTTTGTTACGATGCGCAGAA; site_34; 1; 30; 0; p
BS  ACTCCATGGATCTTGTCAGGGTGTACAGAA; site_35; 1; 30; 0; p
BS  GAACCTAGCAGTACGATAATTTCAGCAATA; site_36; 1; 30; 0; p
CC  program: feature
CC  matrix.nb: 3
CC  matrix.nb: 3
CC  sites: 37
CC  consensus.strict: tcACCttgctttcatataccatagcCAGtg
CC  consensus.strict.rc: CACTGGCTATGGTATATGAAAGCAAGGTGA
CC  consensus.IUPAC: thACCttsctyysmbwyrycrtrkyCAGtr
CC  consensus.IUPAC.rc: YACTGRMYAYGRYRWVKSRRAGSAAGGTDA
CC  consensus.regexp: t[act]ACCtt[cg]ct[ct][ct][cg][ac][cgt][at][ct][ag][ct]c[ag]t[ag][gt][ct]CAGt[ag]
CC  consensus.regexp.rc: [CT]ACTG[AG][AC][CT]A[CT]G[AG][CT][AG][AT][ACG][GT][CG][AG][AG]AG[CG]AAGGT[AGT]A
XX
//
