; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/03/07/oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/03/07/oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/03/07/oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/03/07/oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/03/07/oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	6	8	27	4	2	0	62	1	1	1	2	0	2	5	9
c	12	21	10	2	56	0	2	1	62	59	0	27	5	12	2
g	42	28	25	51	1	65	2	2	3	2	62	2	59	26	46
t	6	9	4	9	7	1	0	62	0	4	2	37	0	23	9
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m1_rc.png
;
a	5	8	22	2	0	1	46	1	0	0	0	0	0	2	4	25	10	7
c	10	14	7	5	51	2	4	1	50	49	4	36	2	14	8	10	16	14
g	33	24	20	34	0	47	1	0	1	0	46	1	49	14	37	7	15	27
t	3	5	2	10	0	1	0	49	0	2	1	14	0	21	2	9	10	3
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m2_rc.png
;
a	19	27	50	3	1	3	2	1	1	56	32	17
c	47	29	11	90	92	2	3	90	87	13	27	33
g	12	22	23	0	0	85	4	0	5	12	10	19
t	15	15	9	0	0	3	84	2	0	12	24	24
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m3_rc.png
;
a	78	92	158	159	46	170	172	171	177	173	164	168	37	78	73
c	32	27	8	9	14	10	5	4	4	3	12	7	12	27	34
g	27	33	7	13	21	5	7	2	4	7	4	6	12	36	31
t	54	39	18	10	110	6	7	14	6	8	11	10	130	50	53
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m4_rc.png
;
a	2	9	6	1	24	1	21	1	4	0	54	0	0	5	13	3	5	3
c	33	20	3	51	22	54	2	53	0	1	0	1	55	4	38	23	26	38
g	14	12	9	1	6	0	32	0	51	54	0	1	0	46	2	5	19	13
t	6	14	37	2	3	0	0	1	0	0	1	53	0	0	2	24	5	1
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m5_rc.png
;
a	65	70	61	159	5	9	12	158	170	177	17	55	60	54
c	41	26	36	6	3	7	5	13	2	3	6	36	32	28
g	28	32	36	6	3	2	13	5	7	3	6	36	26	41
t	54	60	55	17	177	170	158	12	9	5	159	61	70	65
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m6_rc.png
;
a	37	36	12	4	137	2	5	8	7	33	25
c	39	37	140	6	8	6	152	3	143	42	60
g	67	43	11	158	11	155	6	143	17	52	55
t	26	53	6	1	13	6	6	15	2	42	29
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m7_rc.png
;
a	18	20	0	1	57	56	3	0	55	4	28	12
c	11	4	55	55	1	3	3	55	2	4	10	16
g	22	19	1	3	1	1	1	2	2	51	11	20
t	9	17	4	1	1	0	53	3	1	1	11	12
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m8_rc.png
;
a	8	10	0	46	46	0	0	0	10	8
c	9	11	46	0	0	46	46	0	11	16
g	8	13	0	0	0	0	0	46	6	6
t	21	12	0	0	0	0	0	0	19	16
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m9_rc.png
;
a	4	4	0	0	0	44	0	0	10	23
c	18	14	44	44	44	0	44	0	10	13
g	11	8	0	0	0	0	0	44	20	5
t	11	18	0	0	0	0	0	0	4	3
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m10.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m10_rc.png
;
a	94	105	42	215	48	247	266	266	260	256	253	47	85	115
c	36	33	14	13	16	10	10	7	14	12	10	10	50	48
g	47	41	17	12	21	25	8	7	13	9	15	20	69	33
t	122	120	226	59	214	17	15	19	12	22	21	222	95	103
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m11.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m11_rc.png
;
a	22	21	17	1	4	3	1	3	2	6	2	12	16
c	32	29	31	78	78	5	80	4	76	66	68	26	37
g	18	17	24	4	1	72	0	75	2	5	9	25	12
t	11	16	11	0	0	3	2	1	3	6	4	20	18
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m12.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m12_rc.png
;
a	193	223	400	409	124	406	430	425	437	436	421	417	196	221	191
c	82	77	28	19	48	27	18	12	24	11	30	23	71	73	91
g	82	73	23	30	50	24	25	22	14	21	16	18	98	81	80
t	138	122	44	37	273	38	22	36	20	27	28	37	130	120	133
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m13.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m13_rc.png
;
a	37	41	86	86	86	0	0	0	22	24
c	11	22	0	0	0	0	0	0	14	17
g	15	10	0	0	0	0	86	0	20	20
t	23	13	0	0	0	86	0	86	30	25
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m14.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m14_rc.png
;
a	55	60	49	112	13	8	16	122	136	139	136	128	138	28	48	57
c	26	12	20	2	4	6	14	8	8	3	4	13	5	5	28	22
g	18	30	24	6	6	6	5	10	2	8	7	4	6	3	36	11
t	56	53	62	35	132	135	120	15	9	5	8	10	6	119	43	65
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m15.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m15_rc.png
;
a	25	13	88	0	0	88	0	0	32	23
c	15	15	0	0	0	0	0	0	16	13
g	42	50	0	88	88	0	88	88	22	42
t	6	10	0	0	0	0	0	0	18	10
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m16.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m16_rc.png
;
a	22	21	55	55	55	55	0	0	20	11
c	7	13	0	0	0	0	0	55	13	10
g	14	5	0	0	0	0	55	0	6	13
t	12	16	0	0	0	0	0	0	16	21
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m17.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m17_rc.png
;
a	4	7	35	35	0	0	0	0	9	10
c	16	15	0	0	35	0	0	35	4	8
g	7	10	0	0	0	35	35	0	15	17
t	8	3	0	0	0	0	0	0	7	0
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m18.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/07//oligo-analysis_2025-03-07.085840_2rWDJy_pssm_count_matrices_logo_m18_rc.png
;
; Host name	rsat
; Job started	2025-03-07.085853
; Job done	2025-03-07.085858
; Seconds	0.18
;	user	0.18
;	system	0.2
;	cuser	4.19
;	csystem	0.83