; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2025/03/08/oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/03/08/oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/03/08/oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_links.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2025/03/08/oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices.tf
; Input format tf
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2025/03/08/oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_links.txt
; Output format tab
; pseudo-weight 1
a 60 211 55 228 58 205 44 208 27 282 12 288 17 291 17 299 13 291 12 292 8 189 13 250 36 169 50 176
c 62 18 44 19 44 30 29 9 27 8 31 10 29 17 82 7 15 11 31 11 17 10 19 18 22 20 67 26
g 21 57 25 49 13 80 9 104 18 40 5 31 18 23 13 25 7 26 6 29 4 123 13 45 14 94 25 72
t 205 62 224 52 233 33 266 27 276 18 300 19 284 17 236 17 313 20 299 16 319 26 303 35 276 65 206 74
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m1_rc.png
;
a 4 1 1 0 13 4 5 2 0 1 1 13 6 9 2 1 0 13 11 11 1 1 2 0 14 6 7 3
c 4 5 6 0 0 0 1 5 2 2 0 0 0 1 2 7 1 0 0 1 6 7 8 1 0 1 1 3
g 3 1 1 0 1 8 7 6 1 0 0 1 7 2 1 0 0 0 2 2 5 1 0 0 0 6 5 4
t 3 7 6 14 0 2 1 1 11 11 13 0 1 2 9 6 13 1 1 0 2 5 4 13 0 1 1 4
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m2_rc.png
;
a 4 3 2 6 4 10 4 12 2 1 0 14 12 12 2 4 1 1 13 9 10 0
c 2 4 6 4 7 0 2 1 2 13 1 0 0 0 11 9 13 0 0 0 1 8
g 1 1 1 1 0 0 2 0 0 0 1 0 0 0 0 1 0 0 0 2 2 1
t 7 6 5 3 3 4 6 1 10 0 12 0 2 2 1 0 0 13 1 3 1 5
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m3_rc.png
;
a 24 13 57 1 70 2 0 71 15 47 30
c 22 4 1 6 0 0 0 0 32 1 1
g 16 5 1 65 0 68 0 1 11 2 5
t 10 50 13 0 2 2 72 0 14 22 36
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m4_rc.png
;
a 55 152 26 185 6 187 8 191 23 136 56
c 13 4 2 2 2 3 2 1 7 12 11
g 81 3 150 0 181 1 177 0 152 12 93
t 44 34 15 6 4 2 6 1 11 33 33
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m5_rc.png
;
a 91 25 13 7 8 64 106 111 3 12 2 7 112 37 93 6
c 4 36 85 52 29 12 0 0 99 94 103 0 0 2 8 34
g 4 11 1 3 3 23 3 0 1 1 2 0 1 66 2 8
t 14 41 14 51 73 14 4 2 10 6 6 106 0 8 10 65
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m6_rc.png
;
a 67 21 0 103 0 0 103 103 59 38
c 3 12 103 0 0 0 0 0 23 29
g 2 20 0 0 0 103 0 0 3 4
t 31 50 0 0 103 0 0 0 18 32
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m7_rc.png
;
a 54 170 57 197 57 185 35 173 27 252 12 244 22 263 14 269 4 266 9 257 5 168 19 221 32 157 42 151
c 52 17 30 18 39 21 25 10 30 8 31 6 74 9 84 7 13 13 18 6 9 9 20 15 26 12 56 23
g 22 58 18 40 14 69 13 89 15 21 6 26 22 13 12 12 8 14 7 22 3 97 9 34 9 85 26 54
t 172 55 195 45 190 25 227 28 228 19 251 24 182 15 190 12 275 7 266 15 283 26 252 30 233 46 176 72
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m8_rc.png
;
a 1 0 0 0 0 0 6 0 1 1
c 0 0 6 0 6 6 0 0 0 0
g 3 1 0 0 0 0 0 6 0 0
t 2 5 0 6 0 0 0 0 5 5
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m9_rc.png
;
a 3 2 0 0 0 39 0 39 20 5
c 4 1 39 0 0 0 39 0 2 0
g 1 1 0 0 39 0 0 0 3 12
t 31 35 0 39 0 0 0 0 14 22
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m10.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m10_rc.png
;
a 180 62 217 38 265 23 251 27 272 18 207 13 249 11 272 10 272 21 275 15 257 38 259 19 245 50 171
c 24 51 15 67 9 30 11 27 9 21 24 27 23 24 4 28 13 83 5 64 4 32 7 31 8 48 17
g 42 29 44 37 24 5 31 12 20 7 63 8 25 9 18 6 18 13 17 34 14 9 24 13 29 13 71
t 64 168 34 168 12 252 17 244 9 264 16 262 13 266 16 266 7 193 13 197 35 231 20 247 28 199 51
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m11.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m11_rc.png
;
a 45 28 77 77 77 0 77 0 45 22
c 1 7 0 0 0 0 0 0 3 17
g 11 6 0 0 0 77 0 77 18 28
t 20 36 0 0 0 0 0 0 11 10
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m12.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m12_rc.png
;
a 28 13 0 0 0 0 0 28 15 12
c 0 0 28 0 0 0 0 0 0 0
g 0 0 0 0 28 28 28 0 1 14
t 0 15 0 28 0 0 0 0 12 2
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m13.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m13_rc.png
;
a 205 69 241 74 299 29 316 17 306 15 319 13 231 16 285 16 294 17 286 24 274 36 237 51 245 59 203
c 31 75 19 60 9 116 7 34 8 32 7 24 21 24 24 26 2 30 14 99 9 63 10 44 18 61 26
g 56 22 30 29 24 21 16 9 20 9 15 3 76 10 26 8 33 10 28 17 27 37 42 19 38 15 59
t 56 182 58 185 16 182 9 288 14 292 7 308 20 298 13 298 19 291 20 208 38 212 59 234 47 213 60
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m14.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m14_rc.png
;
a 7 1 3 1 14 2 0 2 3 0 0 12 0 9 1 3 0 4 4 6 3
c 0 2 2 0 0 0 1 0 0 0 0 1 0 0 1 4 0 0 1 2 3
g 8 1 1 0 0 12 12 11 0 0 0 2 14 3 1 2 1 4 9 5 6
t 0 11 9 14 1 1 2 2 12 15 15 0 1 3 12 6 14 7 1 2 3
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m15.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m15_rc.png
;
a 26 26 48 48 0 0 0 48 21 21
c 1 1 0 0 48 48 0 0 3 5
g 0 3 0 0 0 0 0 0 2 13
t 21 18 0 0 0 0 48 0 22 9
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m16.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m16_rc.png
;
a 62 205 49 262 21 246 25 267 17 203 13 242 12 271 9 271 20 272 15 255 35 258 20 239 50 171
c 48 17 67 8 28 11 30 10 20 21 21 22 25 3 27 10 81 5 64 6 31 6 33 10 49 19
g 27 47 23 24 5 32 11 19 8 67 9 28 8 17 9 18 15 16 30 17 10 23 12 30 13 69
t 169 37 167 12 252 17 240 10 261 15 263 14 261 15 261 7 190 13 197 28 230 19 241 27 194 47
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m17.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m17_rc.png
;
a 10 30 0 75 0 0 0 75 18 18
c 3 3 0 0 0 0 0 0 7 6
g 18 3 0 0 0 0 75 0 10 21
t 44 39 75 0 75 75 0 0 40 30
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m18.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m18_rc.png
;
a 149 30 189 15 190 12 160 11 153 8 204 6 200 9 199 10 199 8 185 10 187 10 114 27 129 42
c 11 38 6 18 5 14 15 9 7 11 4 17 3 16 9 46 3 11 9 11 6 12 8 34 14 32
g 37 10 21 7 17 4 48 2 58 10 17 2 23 7 14 7 19 6 26 8 25 7 82 10 46 18
t 35 154 16 192 20 202 9 210 14 203 7 207 6 200 10 169 11 207 12 203 14 203 28 161 43 140
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m19.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m19_rc.png
;
a 12 28 0 69 0 0 0 69 21 6
c 2 7 0 0 0 0 69 0 15 29
g 9 14 0 0 0 0 0 0 11 27
t 46 20 69 0 69 69 0 0 22 7
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m20.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/08//oligo-analysis_2025-03-08.180345_MrnMej_pssm_count_matrices_logo_m20_rc.png
;
; Host name rsat
; Job started 2025-03-08.180359
; Job done 2025-03-08.180406
; Seconds 0.29
; user 0.29
; system 0.15
; cuser 5.35
; csystem 0.79