; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/03/19/peak-motifs.2025-03-19.101854_2025-03-19.101854_hlFw6q/results/oligos_6nt_mkv1/peak-motifs_oligos-2str-noov_6nt_mkv1_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/03/19/peak-motifs.2025-03-19.101854_2025-03-19.101854_hlFw6q/results/oligos_6nt_mkv1/peak-motifs_oligos-2str-noov_6nt_mkv1_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/03/19/peak-motifs.2025-03-19.101854_2025-03-19.101854_hlFw6q/results/oligos_6nt_mkv1/peak-motifs_oligos-2str-noov_6nt_mkv1_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/03/19/peak-motifs.2025-03-19.101854_2025-03-19.101854_hlFw6q/results/oligos_6nt_mkv1/peak-motifs_oligos-2str-noov_6nt_mkv1_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/03/19/peak-motifs.2025-03-19.101854_2025-03-19.101854_hlFw6q/results/oligos_6nt_mkv1/peak-motifs_oligos-2str-noov_6nt_mkv1_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	0	4	0	2	0	0	1	0	3	4
c	3	2	9	8	10	1	0	10	3	1
g	2	0	0	0	0	0	0	0	0	1
t	5	4	1	0	0	9	9	0	4	4
//
; Sites	10
>site_0
TACCCTTCTT
>site_1
CTCCCTTCTA
>site_2
CACCCTACCA
>site_3
TCCACTTCAT
>site_4
TACACTTCCA
>site_5
GCCCCTTCTT
>site_6
GACCCTTCAC
>site_7
TTCCCTTCCT
>site_8
CTTCCTTCAG
>site_9
TTCCCCTCTA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/19/peak-motifs.2025-03-19.101854_2025-03-19.101854_hlFw6q/results/oligos_6nt_mkv1//peak-motifs_oligos-2str-noov_6nt_mkv1_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/19/peak-motifs.2025-03-19.101854_2025-03-19.101854_hlFw6q/results/oligos_6nt_mkv1//peak-motifs_oligos-2str-noov_6nt_mkv1_pssm_count_matrices_logo_m1_rc.png
;
a	6	8	19	19	19	19	0	19	10	11
c	1	2	0	0	0	0	0	0	2	1
g	6	2	0	0	0	0	19	0	4	2
t	6	7	0	0	0	0	0	0	3	5
//
; Sites	19
>site_0
GAAAAAGAAA
>site_1
TTAAAAGAAT
>site_2
ATAAAAGAGT
>site_3
ATAAAAGATA
>site_4
TTAAAAGATA
>site_5
TCAAAAGAAA
>site_6
GGAAAAGACA
>site_7
GGAAAAGAAT
>site_8
ATAAAAGAAT
>site_9
ATAAAAGAAG
>site_10
TAAAAAGAGC
>site_11
GAAAAAGAAA
>site_12
ATAAAAGAGA
>site_13
CCAAAAGAAA
>site_14
GAAAAAGAAT
>site_15
GAAAAAGAGA
>site_16
AAAAAAGAAA
>site_17
TAAAAAGATG
>site_18
TAAAAAGACA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/19/peak-motifs.2025-03-19.101854_2025-03-19.101854_hlFw6q/results/oligos_6nt_mkv1//peak-motifs_oligos-2str-noov_6nt_mkv1_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/19/peak-motifs.2025-03-19.101854_2025-03-19.101854_hlFw6q/results/oligos_6nt_mkv1//peak-motifs_oligos-2str-noov_6nt_mkv1_pssm_count_matrices_logo_m2_rc.png
;
; Host name	rsat
; Job started	2025-03-19.101902
; Job done	2025-03-19.101903
; Seconds	0.11
;	user	0.11
;	system	0.03
;	cuser	0.55
;	csystem	0.06
