; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/03/19/peak-motifs.2025-03-19.101854_2025-03-19.101854_hlFw6q/results/oligos_7nt_mkv1/peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/03/19/peak-motifs.2025-03-19.101854_2025-03-19.101854_hlFw6q/results/oligos_7nt_mkv1/peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/03/19/peak-motifs.2025-03-19.101854_2025-03-19.101854_hlFw6q/results/oligos_7nt_mkv1/peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/03/19/peak-motifs.2025-03-19.101854_2025-03-19.101854_hlFw6q/results/oligos_7nt_mkv1/peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/03/19/peak-motifs.2025-03-19.101854_2025-03-19.101854_hlFw6q/results/oligos_7nt_mkv1/peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	4	4	0	1	1	0	0	0	1	4	2
c	2	1	9	8	1	0	0	0	6	2	1
g	0	1	0	0	7	0	0	0	1	1	1
t	3	3	0	0	0	9	9	9	1	2	5
//
; Sites	9
>site_0
TCCCGTTTCCA
>site_1
TTCCGTTTTAT
>site_2
AACCGTTTCAA
>site_3
AGCCGTTTAGT
>site_4
AACCGTTTGAT
>site_5
TACCATTTCAT
>site_6
ATCCCTTTCTG
>site_7
CACCGTTTCCT
>site_8
CTCAGTTTCTC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/19/peak-motifs.2025-03-19.101854_2025-03-19.101854_hlFw6q/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/03/19/peak-motifs.2025-03-19.101854_2025-03-19.101854_hlFw6q/results/oligos_7nt_mkv1//peak-motifs_oligos-2str-noov_7nt_mkv1_pssm_count_matrices_logo_m1_rc.png
;
; Host name	rsat
; Job started	2025-03-19.101904
; Job done	2025-03-19.101905
; Seconds	0.11
;	user	0.12
;	system	0
;	cuser	0.2
;	csystem	0.03
