; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.111011_2025-04-03.111011_OYKgLb/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.111011_2025-04-03.111011_OYKgLb/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.111011_2025-04-03.111011_OYKgLb/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.111011_2025-04-03.111011_OYKgLb/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.111011_2025-04-03.111011_OYKgLb/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	16	8	4	17	1	0	74	0	0	5	74	0	0	45	20	10
c	15	16	1	55	0	4	0	24	0	68	0	2	72	14	15	20
g	15	17	63	1	0	51	0	50	0	1	0	53	1	10	18	18
t	28	33	6	1	73	19	0	0	74	0	0	19	1	5	21	26
//
; Sites	74
>site_0
ATGCTGACTCAGCGCG
>site_1
GCGCTGAGTCAGCATC
>site_2
CGGATGACTCAGCGCG
>site_3
GCGCTGAGTCATCCGC
>site_4
TGGCTGACTCACCGCG
>site_5
GCGGTGAGTCAGCCAG
>site_6
TTGCTTAGTCATCATT
>site_7
CTGCTGACTCATCATT
>site_8
ATGATGAGTCAGCAGT
>site_9
CGGCTGAGTCATCCAG
>site_10
TGGATGACTCAGCCGG
>site_11
AAAATGAGTCAGCCGT
>site_12
CTGCTGACTCAGCCCT
>site_13
GGGCTGAGTCAGCAGT
>site_14
CTGCTGACTCAGCCGC
>site_15
CGGCTGAGTCAGCAGG
>site_16
TCGCTTAGTCATCATT
>site_17
TCGATTAGTCATCATT
>site_18
ATGCTGACTCAGCTGC
>site_19
CAGCTGAGTCAGCATC
>site_20
CTGCTGACTCATCACA
>site_21
GTGATGAGTCAGCAGC
>site_22
TCGCTTAGTCATCATT
>site_23
TCGCTTAGTCATCATT
>site_24
TGGCTGAGTCAGCCAC
>site_25
TGGCTGACTCAGCCAG
>site_26
TCGCTGACTCATCGCC
>site_27
GCGATGAGTCAGCGAC
>site_28
TTGCTGACTCAGCAAC
>site_29
TTGCTGAGTCAGCAAG
>site_30
TCGATTAGTCATCATT
>site_31
TCGATTAGTCATCATT
>site_32
ATGATGAGTAAGCCAG
>site_33
CTGCTGACTCAGCTCC
>site_34
GAGCTGAGTCAGCAGT
>site_35
AGTCTTAGTCAGCATC
>site_36
GTGATGACTCAGCAAG
>site_37
TTGCTGAGTCATCACT
>site_38
GTACTTAGTCAGCATT
>site_39
TATCTTAGTCAGCATT
>site_40
CTGCTCAGTAAGCAGG
>site_41
CCGCTGAGTAAGCATA
>site_42
ATGCTTACTCAGCGGA
>site_43
AGGATCAGTCAGCGGA
>site_44
ATTATTAGTCAGCATG
>site_45
TAGCTGACTCAGCATC
>site_46
ATGCTGAGTCAGCTAA
>site_47
TTGCTGAGTCAGTGGC
>site_48
CCACTGACTCAGCAAT
>site_49
GAGATGAGTAAGCGAT
>site_50
TTGCTGAGTAAGCAAT
>site_51
TTGCTTACTCAGCAAT
>site_52
TTGCTTAGTCACCTGA
>site_53
TTGCTTAGTCATCACA
>site_54
TGGCTGAGTCAGCCAC
>site_55
TGGCTGACTCAGCCAC
>site_56
CTGCTGAGTCAGCACT
>site_57
GTGCTGACTCAGCAGG
>site_58
TTGATGACTCAGCAAC
>site_59
TTGCTGAGTCATCAAA
>site_60
AGTCTTAGTCAGCATC
>site_61
CGTATCAGTCAGCAGA
>site_62
GAACACAGTCAGCAGG
>site_63
ATGCTGAGTGATCAAT
>site_64
AGGCTGAGTCAGCACA
>site_65
GTGCTGACTCAGCCTG
>site_66
CCGCTGAGTCATGGCG
>site_67
ACCTTTAGTCAGCATT
>site_68
TAGCTGACTCATCACT
>site_69
GTGATGAGTCAGCTAT
>site_70
GTGCTGACTCAGCCTT
>site_71
AGGCTGAGTCAGCACG
>site_72
TCGCTTAGTCATCACC
>site_73
AGTCTTAGTCAGCATC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.111011_2025-04-03.111011_OYKgLb/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.111011_2025-04-03.111011_OYKgLb/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m1_rc.png
;
a	6	20	0	0	64	0	2	41	65	2	10	17	30
c	8	31	1	1	0	60	2	19	0	4	45	17	9
g	48	8	0	59	0	4	1	4	0	51	3	20	12
t	3	6	64	5	1	1	60	1	0	8	7	11	14
//
; Sites	65
>site_0
GCTGACTCAGCGC
>site_1
GGTGACCAAGTCG
>site_2
CTCGACTAACCCA
>site_3
GATGACTCAGCGC
>site_4
GCTGACTCACCGC
>site_5
GATGACTAAGCAA
>site_6
GATGACTCAGCCG
>site_7
CATGACTTAGTGA
>site_8
CGTCACTAAGTCA
>site_9
GCTGACTCAGCCC
>site_10
CCTGATTAAGTAG
>site_11
GGTGACTGAGATA
>site_12
GCTTACTAATCTT
>site_13
GCTGACTCAGCCG
>site_14
AGTGACGAAGCGA
>site_15
GATGACTAAGCGA
>site_16
GATGACTAATCGA
>site_17
GATGACTAATCAG
>site_18
ACTTACTAATCTT
>site_19
GCTGACTCAGCTG
>site_20
CCTGACCAAGGCT
>site_21
GATGACTAAGCGA
>site_22
GATGACTAAGCGA
>site_23
GCTGACTCAGCCA
>site_24
GCTGACTCAGCAA
>site_25
GATGACTAATCGA
>site_26
GATGACTAATCGA
>site_27
TCTGTCTAACCGC
>site_28
GATGAGTAAGCCA
>site_29
GCTGACTCAGCTC
>site_30
AATGACTAAGCGA
>site_31
GATTACTAAGCAT
>site_32
GCTGACTAAGACT
>site_33
GATGACTCAGCAA
>site_34
GGTGACTGAGATA
>site_35
GCTGACTAAGTAC
>site_36
GCTGACTAAGATA
>site_37
GCTGAGTAAGCAT
>site_38
TTTGACTAAATGG
>site_39
ATTGACTAAGCAG
>site_40
GCTGACTAATAAT
>site_41
GCTGACTCAGCAT
>site_42
GTTGACAAATCCG
>site_43
ACTGACTCAGCAA
>site_44
CCTTACTAACCCC
>site_45
GGTGACTGAGATA
>site_46
GATGAGTAAGCGA
>site_47
GCTGAGTAAGCAA
>site_48
GGTGACTAAGCAA
>site_49
GATGACTAAGCAA
>site_50
ACTGACTAAGAGC
>site_51
GCTGACTCAGCCA
>site_52
GCTGACTCAGCAG
>site_53
GATGACTCAGCAA
>site_54
GCTGACTAAGACT
>site_55
TTTGACAAAGGTA
>site_56
CCTGACTAAGTGT
>site_57
GCTGACTCAGCCT
>site_58
GGTGACTGAGATA
>site_59
CATGACTCAGCGG
>site_60
GCTGACTAAAGGT
>site_61
GTTTACTAAGCTG
>site_62
GCTGACTCAGCCT
>site_63
GATGACTAAGCGA
>site_64
GCTGACTAAGACT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.111011_2025-04-03.111011_OYKgLb/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.111011_2025-04-03.111011_OYKgLb/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m2_rc.png
;
a	4	4	53	3	0	1	52	0	0	45	8	7	6
c	2	6	0	5	0	51	1	1	52	5	8	13	18
g	5	21	0	44	0	1	0	21	0	0	11	7	11
t	42	22	0	1	53	0	0	31	1	3	26	26	18
//
; Sites	53
>site_0
TGAGTCAGCATCG
>site_1
TGAGTCATCCGCC
>site_2
GGAGTCATCCGCC
>site_3
TTAGTCATCATTG
>site_4
TGACTCATCATTC
>site_5
TGAGTCAGCAGTA
>site_6
TGAGTCATCCAGT
>site_7
CAATTCATCAAGC
>site_8
GAAGTCATCATTG
>site_9
TGAGTCAGCAGTC
>site_10
TGAGTCAGCAGGC
>site_11
TTAGTCATCATTT
>site_12
AGAATCATCCTTC
>site_13
TTAGTCATCATTT
>site_14
TTAGTCATCTGAT
>site_15
TGAGTCAGCATCG
>site_16
TGACTCATCACAA
>site_17
TGAGTCAGCAGCT
>site_18
TTAGTCATCATTC
>site_19
TTAGTCATCATTT
>site_20
TGAGTCAGCAAGC
>site_21
TTAGTCATCATTT
>site_22
TTAGTCATCATTT
>site_23
TTACTCATCATTC
>site_24
TGAGTCAGCAGTC
>site_25
TAAGTCCTCATTT
>site_26
TTAGTCATTATTT
>site_27
AAACTCATCATCG
>site_28
TTAGTAATCAATC
>site_29
TCAATCATCTTCG
>site_30
TTAGTCAGCATCT
>site_31
TGAGTCATCACTT
>site_32
TTAGTCAGCATTT
>site_33
TTAGTCAGCATTG
>site_34
TTAGTCAGCATGC
>site_35
TTAGTCATCACAA
>site_36
TGAGTCAGCACTA
>site_37
GTAGTCACCAGCC
>site_38
CCAGTCAGCTTAG
>site_39
ACAGTCATCATCA
>site_40
TGAGTCATCAAAG
>site_41
TTAGTCAGCATCT
>site_42
TCAGTCAGCAGAA
>site_43
ACAGTCAGCAGGC
>site_44
GTAATCATCAATC
>site_45
TGAGTGATCAATC
>site_46
TGAGTCAGCACAC
>site_47
TTAGTCAGCATTT
>site_48
TGACTCATCACTG
>site_49
GCAGTCATCCATT
>site_50
TGAGTCAGCACGG
>site_51
TTAGTCATCACCT
>site_52
TTAGTCAGCATCT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.111011_2025-04-03.111011_OYKgLb/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.111011_2025-04-03.111011_OYKgLb/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m3_rc.png
;
a	7	9	5	19	25	31	31	1	0	26	1	4	7	10
c	9	6	2	1	1	1	0	0	1	2	1	1	8	4
g	7	12	25	9	1	0	1	27	31	3	30	27	13	8
t	9	5	0	3	5	0	0	4	0	1	0	0	4	10
//
; Sites	32
>site_0
GGGAAAATCAGGGG
>site_1
TAAATAAGGAGGCA
>site_2
TAAATAAGGAGGCA
>site_3
CGGAAAAGGAGAGT
>site_4
CAGAAAAGGCGGGC
>site_5
CGGCGAAGGAGGGA
>site_6
CTGGAAAGGAGGGA
>site_7
AGGGAAAGGAGGGT
>site_8
AGGGTAAGGAGGGT
>site_9
GGGTTAAGGAGGGT
>site_10
GGGTAAAGGAGGGA
>site_11
CTGGAAAGGAGGGT
>site_12
CCGGAAAGGTGGGG
>site_13
TCAAAAATGAGGCT
>site_14
TACAAAAGGAAGTC
>site_15
GGCAAAAGGAGAAG
>site_16
GCGAAAAGGAGAAA
>site_17
AAGAAAAGGGGGAG
>site_18
TAGAAAAGGAGGCG
>site_19
TTGAAAAGGAGGAA
>site_20
AGGAAAAGGAGGAA
>site_21
GGAATAAGGAGGCC
>site_22
GGGGAAAAGAGGAG
>site_23
AGGAACAGGAGGTA
>site_24
CCGGAAATGAGGCT
>site_25
TAGAAAAGGGGCTT
>site_26
ATAAAAAGGGGGAA
>site_27
ACGTCAAGGAGGCC
>site_28
TAGGAAAGGAGAGG
>site_29
CTGGAAAGGAGGGT
>site_30
TCGAAAGGGACGTG
>site_31
CAGAAAATGCGGCT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.111011_2025-04-03.111011_OYKgLb/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.111011_2025-04-03.111011_OYKgLb/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m4_rc.png
;
a	7	8	93	3	1	66	97	1	0	39	40
c	22	23	2	12	3	31	1	1	97	14	20
g	10	43	2	84	12	2	0	96	1	17	24
t	61	26	3	1	84	1	2	2	2	30	16
//
; Sites	100
>site_0
TGAGTCAGCAT
>site_1
TGAGTCAGCCA
>site_2
TGACTAAGCAA
>site_3
TGAGTCAGCAG
>site_4
ACAGTCAGCCC
>site_5
TGAGTCAGCCG
>site_6
TGAGTCAGCAG
>site_7
TTAGTAAGCAA
>site_8
CGAGGAAGCTC
>site_9
CCTGTAAGCGA
>site_10
TGAGTCAGCAG
>site_11
ACAGTATGCCC
>site_12
TGACTAAGCGA
>site_13
TTAGTAAGCTA
>site_14
CGAGGAAGCTC
>site_15
TTAGTAAGCTA
>site_16
TTAGTAAGTGA
>site_17
CAACTAAGCCA
>site_18
TGAGTCAGCAT
>site_19
TGAGTCAGCAG
>site_20
GCAGTACGCCA
>site_21
ACAGAAAGCAG
>site_22
TGACTAAGCGA
>site_23
TCAGTAAGCTA
>site_24
CGAGGAAGCTC
>site_25
CTAATAAGCAG
>site_26
TGACTAAGCGA
>site_27
TTAGTAAGCTA
>site_28
TGAGTCAGCCA
>site_29
TGAGTCAGCGA
>site_30
TGAGTCAGCAA
>site_31
TTAGTAAGCTA
>site_32
GCAGTATGCCC
>site_33
TTAGTAAGCTA
>site_34
TATGTAAGCTG
>site_35
TGAGTAAGCCA
>site_36
CAAGCAAGCTA
>site_37
TATGTAAGCGC
>site_38
TGAGTCAGCAG
>site_39
GCAGTGAGCAG
>site_40
GCGGTAAGCGT
>site_41
TCAGTGAGCCG
>site_42
TTAGTAAGCTA
>site_43
TGACTAAGCGA
>site_44
GCAGTTAGCGC
>site_45
TTACTAAGCAT
>site_46
TTAGTAATCAA
>site_47
TTAGTCAGCAT
>site_48
CAAGGAAGCTA
>site_49
TCAGCAAGCAC
>site_50
CGAGGAAGCTC
>site_51
TTAGTCAGCAT
>site_52
TTAGTCAGCAT
>site_53
CGAGGAAGCTC
>site_54
TCAGTAAGCAG
>site_55
GCAGTAAGCTT
>site_56
TTCGTAAGCTT
>site_57
TGAGTAAGCAT
>site_58
TCAGTCAGCGG
>site_59
GCATTAAGCAA
>site_60
CGAGTAATCCA
>site_61
TGACTAAGCAG
>site_62
TTAGTCAGCAT
>site_63
AGAGCAAGCGG
>site_64
CGAGGAAGCTC
>site_65
TGAGTCAGCTA
>site_66
CGAGGAAGCTC
>site_67
GCAGTCAGCTC
>site_68
TTAGTAAGGGG
>site_69
TGAGTAAGCGA
>site_70
TGAGTAAGCAA
>site_71
TGACTAAGCAA
>site_72
TGACTAAGCAA
>site_73
TGAGTCAGCCA
>site_74
CCAGTAACCGG
>site_75
TGAGTCAGCAC
>site_76
CCAGTCAGCTT
>site_77
AGAGTAAGCTG
>site_78
CAAGGAAGCTA
>site_79
TTAGTCAGCAT
>site_80
GCGGTAAGCGA
>site_81
TCAGTCAGCAG
>site_82
ACAGTCAGCAG
>site_83
GTCGTAAGCAG
>site_84
CGAGGAAGCTC
>site_85
ACAGTAAGTTT
>site_86
CTAATAAGCCC
>site_87
CGAGGAAGCTC
>site_88
TGAGTCAGCAC
>site_89
TAAGTAAGCAA
>site_90
CTAATAAGCAG
>site_91
TTAGTCAGCAT
>site_92
TGAGTCAGCTA
>site_93
TTACTAAGCTG
>site_94
TTAGTAAACCA
>site_95
TGAGTCAGCAC
>site_96
CTAGTAAGCAG
>site_97
TGACTAAGCGA
>site_98
TTAGTCAGCAT
>site_99
CAAGGAAGCTA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.111011_2025-04-03.111011_OYKgLb/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.111011_2025-04-03.111011_OYKgLb/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2025-04-03.111024
; Job done	2025-04-03.111025
; Seconds	0.13
;	user	0.13
;	system	0.05
;	cuser	1.25
;	csystem	0.22
