; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.123236_2025-04-03.123236_7SuSOx/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o $RSAT/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.123236_2025-04-03.123236_7SuSOx/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.123236_2025-04-03.123236_7SuSOx/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.123236_2025-04-03.123236_7SuSOx/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	6	10	3	0	50	0	0	4	49	1	0	21	17
c	4	31	4	6	0	12	1	46	0	1	44	14	8
g	36	4	4	40	0	39	0	1	1	48	2	10	15
t	5	6	40	5	1	0	50	0	1	1	5	6	11
//
; Sites	51
>site_0
GCTGACTCAGCGC
>site_1
GCTGAGTCAGCAT
>site_2
GATGAGTCAGCAG
>site_3
GTACAGTCAGCCC
>site_4
GCTGACTCAGCCG
>site_5
GCTGAGTCAGCAG
>site_6
GTGGAGTCAGGGA
>site_7
GCTGACTCAGCTC
>site_8
GCTGAGTCAGCAG
>site_9
GATGAGTCAGCAG
>site_10
GGTGAGCCAGTCG
>site_11
AAGGAGTCTGCGG
>site_12
GCTGAGTCAGCCA
>site_13
GCTGACTCAGCCA
>site_14
GATGAGTCAGCGA
>site_15
GCTGACTCAGCAA
>site_16
GCTGAGTCAGCAA
>site_17
GACGAGTCGGCCA
>site_18
GATGAGTAAGCCA
>site_19
GCTGACTCAGCTC
>site_20
GCTGAGTCAGCAG
>site_21
CAGGAGTCAGTCT
>site_22
TCTTAGTCAGCAT
>site_23
GATGACTCAGCAA
>site_24
GCTGAGTCATCAC
>site_25
GTTGTGTCAGGGG
>site_26
GCTGAGTAAGCAT
>site_27
GATCAGTCAGCGG
>site_28
GCTGACTCAGCAT
>site_29
GCTGAGTCAGCTA
>site_30
CCCGAGTCACCGA
>site_31
ATGCAGTCAGCTC
>site_32
GCTGAGTCAGTGG
>site_33
ACTGACTCAGCAA
>site_34
GATGAGTAAGCGA
>site_35
TGCCAGTCAGCAA
>site_36
GCTGAGTCAGCCG
>site_37
GCTGACTCAGCAT
>site_38
GCTGACTCAGCAC
>site_39
GCTGAGTCAGCCT
>site_40
CGAGAGTGAGCCC
>site_41
TCTTAGTCAGTTG
>site_42
GCTGAGTCAGCCA
>site_43
GCTGACTCAGCCA
>site_44
AGCCAGTCAGCTT
>site_45
TCTTAGTCAGCAT
>site_46
ACACAGTCAGCAG
>site_47
ATTGAGTCAATCA
>site_48
GCTGAGTAAGCGG
>site_49
CTTTAGTCAGCAT
>site_50
TCTTAGTCAGCAT
a	19	8	34	43	48	47	1	1	42	3	14	13
c	10	9	1	2	1	0	0	0	0	2	6	10
g	16	24	13	1	1	3	48	49	8	44	25	13
t	5	9	2	4	0	0	1	0	0	1	5	14
//
; Sites	50
>site_0
GTAAAAGGGGCT
>site_1
GGACAAGGAGTG
>site_2
ACGAAAGGACAT
>site_3
GGAAAAGGAAGG
>site_4
CGCAAAGGAGGA
>site_5
AAGAAAGGAGTC
>site_6
AAATAAGGAGGC
>site_7
AAATAAGGAGGC
>site_8
GTATAAGGAGAC
>site_9
ATAAAGGGAGGA
>site_10
AGGAAAGGAGAT
>site_11
AGAAAAGAAGAT
>site_12
AAAAAAGGACTA
>site_13
GGAAAAGGAGAG
>site_14
CTTAAAGGAGCA
>site_15
TGGAAAGGAGGG
>site_16
GGGAAAGGAGGG
>site_17
GGTAAAGGAGGG
>site_18
TGGAAAGGAGGG
>site_19
GCAGAAGGAGCT
>site_20
CAAAAATGAGGC
>site_21
ACAAAAGGAAGT
>site_22
CCAAAAGGGGTG
>site_23
GGAAAAGGGGCT
>site_24
GCAAAAGGAGAA
>site_25
CGAAAAGGAGAA
>site_26
AGAAAAGGGGGA
>site_27
CTGAAAGGAGGT
>site_28
AGAAAAGGATAG
>site_29
GCGAAAGGAGGG
>site_30
AGAAAAGGAGGC
>site_31
TGAAAAGGAGGA
>site_32
GGAAAAGGAGGA
>site_33
GAATAAGGAGGC
>site_34
AAAAGAGGAGAC
>site_35
GGAACAGGAGGT
>site_36
CCACAAGGAGAT
>site_37
CTGAAAGGAGCC
>site_38
AGAAAAGGGGCT
>site_39
AGGAAAGGAGAT
>site_40
ATAAAGGGAGGA
>site_41
TAAAAAGGGGGA
>site_42
AGGAAAGGAGAG
>site_43
CCAAAAGGAAAT
>site_44
GGAAAAGGGGGA
>site_45
TGGAAAGGAGGG
>site_46
GTAAAAAGAGGC
>site_47
ATAAAGGGAGGA
>site_48
AGGAAAGGAGAT
>site_49
CCAAAAGGGGTG
a	5	9	1	38	0	0	1	2	2	15	14
c	8	7	37	0	2	4	1	3	36	7	13
g	15	4	0	0	35	34	34	31	0	10	5
t	10	18	0	0	1	0	2	2	0	6	6
//
; Sites	38
>site_0
ATCAGGGGCGT
>site_1
CCCACGGGCCA
>site_2
GTCAGGGGAAC
>site_3
GCCAGCGGCGC
>site_4
TTCAGGGGCAA
>site_5
GTCAGGGACAC
>site_6
TACAGGTGCAC
>site_7
CACAGCGGCAC
>site_8
TGCAGGGGCGG
>site_9
AGCAGGGGCTG
>site_10
CCCAGGGGCAG
>site_11
CCCAGGGGCTT
>site_12
GTCAGGGCCGA
>site_13
CTCAGGGGCTA
>site_14
GACAGCGGCTA
>site_15
GTCAGGCGCCT
>site_16
GTCAGGGGCAA
>site_17
ATCAGGGGCAA
>site_18
GTCAGGGTCAC
>site_19
TTCAGGTGCAC
>site_20
GGCACGGGCAA
>site_21
GACAGGGGCCG
>site_22
TTCAGGGGCCA
>site_23
CACAGGGGCTA
>site_24
ACCAGGGGCCA
>site_25
GTAAGGGGCGT
>site_26
GTCAGGGGAAC
>site_27
TTCAGGGGCAA
>site_28
GACAGGGGCTG
>site_29
GCCAGGGACGA
>site_30
CTCAGGGGCCT
>site_31
TTCAGGAGCGT
>site_32
TACAGGGCCGC
>site_33
GGCAGGGTCAC
>site_34
ACCAGGGGCGA
>site_35
TACAGGGCCGC
>site_36
CTCAGCGGCAC
>site_37
TACATGGGCCC
a	5	7	13	17	19	24	0	0	0	3	0	5	8
c	6	8	3	4	5	0	0	2	0	0	19	4	2
g	7	5	7	0	0	0	24	22	24	21	3	9	8
t	6	4	1	3	0	0	0	0	0	0	2	6	6
//
; Sites	24
>site_0
GTAAAAGGGGCTG
>site_1
AAATCAGGGGCGT
>site_2
CTTAAAGCGGCGT
>site_3
GCATAAGGGACGG
>site_4
TCACAAGCGGCAC
>site_5
ACGAAAGGGACCA
>site_6
CCAAAAGGGGTGA
>site_7
GGAAAAGGGGCTC
>site_8
AGAAAAGGGGGAG
>site_9
TGGAAAGGGGCTG
>site_10
GCCAAAGGGGCTT
>site_11
CAGCAAGGGGCGG
>site_12
TAGACAGGGGCCG
>site_13
CCCAAAGGGGCCA
>site_14
AACACAGGGGCTA
>site_15
GTACCAGGGGCCA
>site_16
TAGTAAGGGGCGT
>site_17
AGAAAAGGGGCTT
>site_18
TAAAAAGGGGGAA
>site_19
GGAAAAGGGGGAG
>site_20
TCGAAAGGGACGT
>site_21
CAGAAAGGGGCAG
>site_22
GTACCAGGGGCGA
>site_23
CCAAAAGGGGTGA
; Host name	rsat
; Job started	2025-04-03.123244
; Job done	2025-04-03.123244
; Seconds	0.11
;	user	0.11
;	system	0.01
;	cuser	0
;	csystem	0
