; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.123236_2025-04-03.123236_7SuSOx/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.123236_2025-04-03.123236_7SuSOx/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.123236_2025-04-03.123236_7SuSOx/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.123236_2025-04-03.123236_7SuSOx/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.123236_2025-04-03.123236_7SuSOx/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	13	6	2	8	1	0	48	0	0	6	48	0	1	28	13	7
c	12	11	1	39	0	3	0	17	0	42	0	0	46	8	8	20
g	10	11	42	0	1	34	0	31	0	0	0	41	0	9	14	10
t	13	20	3	1	46	11	0	0	48	0	0	7	1	3	13	11
//
; Sites	48
>site_0
ATGCTGACTCAGCGCG
>site_1
GCGCTGAGTCAGCATC
>site_2
CTGCTGACTCATCATT
>site_3
ATGATGAGTCAGCAGT
>site_4
AAGATTAGTAAGCAAC
>site_5
CTGCTGACTCAGCCGC
>site_6
CGGCTGAGTCAGCAGG
>site_7
TCGCTTAGTCATCATT
>site_8
CTGCTGACTCAGCTCC
>site_9
GAGCTGAGTCAGCAGG
>site_10
CTGCTGACTCATCACA
>site_11
GTGATGAGTCAGCAGC
>site_12
TCGCTTAGTCATCATT
>site_13
TCGCTTAGTCATCATT
>site_14
TGGCTGAGTCAGCCAC
>site_15
TGGCTGACTCAGCCAG
>site_16
TCGCTGACTCATCGCC
>site_17
GCGATGAGTCAGCGAC
>site_18
TTGCTGACTCAGCAAC
>site_19
TTGCTGAGTCAGCAAG
>site_20
ATGATGAGTAAGCCAG
>site_21
CTGCTGACTCAGCTCC
>site_22
GAGCTGAGTCAGCAGT
>site_23
AGTCTTAGTCAGCATC
>site_24
GTGATGACTCAGCAAG
>site_25
TTGCTGAGTCATCACT
>site_26
CTGCTCAGTAAGCAGG
>site_27
CCGCTGAGTAAGCATA
>site_28
ATGCTTACTCAGCGGA
>site_29
AGGATCAGTCAGCGGA
>site_30
TAGCTGACTCAGCATC
>site_31
ATGCTGAGTCAGCTAA
>site_32
TTGCTGAGTCAGTGGC
>site_33
CCACTGACTCAGCAAT
>site_34
GAGATGAGTAAGCGAT
>site_35
GTGCGTAGTCAGAACC
>site_36
ATGCTGAGTCAGCCGT
>site_37
CGGCTGACTCAGCATC
>site_38
AGGCTGACTCAGCACG
>site_39
GTGCTGAGTCAGCCTA
>site_40
TGGCTGAGTCAGCCAC
>site_41
TGGCTGACTCAGCCAC
>site_42
AGTCTTAGTCAGCATC
>site_43
GAACACAGTCAGCAGG
>site_44
CCGCTGAGTAAGCGGA
>site_45
CCGCTTACTCAGCGGC
>site_46
ACCTTTAGTCAGCATT
>site_47
AGTCTTAGTCAGCATC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.123236_2025-04-03.123236_7SuSOx/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.123236_2025-04-03.123236_7SuSOx/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m1_rc.png
;
a	11	16	5	27	39	44	42	2	2	40	2	9	13	13
c	8	7	3	2	1	2	0	0	1	0	1	2	8	8
g	13	17	33	15	1	0	4	42	43	5	42	34	15	12
t	14	6	5	2	5	0	0	2	0	1	1	1	10	13
//
; Sites	46
>site_0
AGGACAAGGAGTGT
>site_1
GGGAAAAGGAAGGA
>site_2
TCGCAAAGGAGGAA
>site_3
GAGGAAAGCAGGCT
>site_4
TAAATAAGGAGGCA
>site_5
TAAATAAGGAGGCA
>site_6
GATAAAGGGAGGAG
>site_7
TAGGAAAGGAGATC
>site_8
CGGCGAAGGAGGGA
>site_9
CAGAAAAGAAGATC
>site_10
TGGAAAAGGAGAGT
>site_11
CTGGAAAGGAGGGA
>site_12
AGGGAAAGGAGGGT
>site_13
AGGGTAAGGAGGGT
>site_14
GGGTTAAGGAGGGT
>site_15
GGGTAAAGGAGGGA
>site_16
CTGGAAAGGAGGGT
>site_17
CCGGAAAGGTGGGG
>site_18
TCAAAAATGAGGCT
>site_19
TACAAAAGGAAGTC
>site_20
AGGAAAAGGGGCTC
>site_21
GGCAAAAGGAGAAG
>site_22
GCGAAAAGGAGAAA
>site_23
AAGAAAAGGGGGAG
>site_24
CTGAACAGAAGGAC
>site_25
GCTGAAAGGAGGTG
>site_26
GAGAAAAGGATAGA
>site_27
AGCGAAAGGAGGGT
>site_28
TAGAAAAGGAGGCG
>site_29
TTGAAAAGGAGGAA
>site_30
AGGAAAAGGAGGAA
>site_31
GGAATAAGGAGGCC
>site_32
GGGGAAAAGAGGAG
>site_33
AGGAACAGGAGGTA
>site_34
CCGGAAATGAGGCT
>site_35
TAGAAAAGGGGCTT
>site_36
TAGGAAAGGAGATC
>site_37
GATAAAGGGAGGAG
>site_38
ATAAAAAGGGGGAA
>site_39
TAGGAAAGGAGAGG
>site_40
AGGAAAAGGGGGAG
>site_41
CTGGAAAGGAGGGT
>site_42
TCGAAAGGGACGTG
>site_43
AGTAAAAAGAGGCT
>site_44
GATAAAGGGAGGAG
>site_45
TAGGAAAGGAGATC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.123236_2025-04-03.123236_7SuSOx/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.123236_2025-04-03.123236_7SuSOx/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m2_rc.png
;
a	5	5	17	19	20	0	0	0	1	0	1	9	7
c	5	4	2	2	0	0	2	0	0	17	1	1	4
g	4	7	1	0	1	21	19	21	20	1	5	5	9
t	7	5	1	0	0	0	0	0	0	3	14	6	1
//
; Sites	21
>site_0
TAAAAGGGGCTGG
>site_1
TTCAAGGGGCTAA
>site_2
TTCAAGGGGCTAA
>site_3
GGAAAGCGGCTGA
>site_4
TTAAAGCGGCGTG
>site_5
CAAAAGGGGTGAC
>site_6
GAAAAGGGGCTCG
>site_7
ATAAAGGGGGTAA
>site_8
GGAAAGGGGCTGG
>site_9
CCAAAGGGGCTTA
>site_10
CCAAAGGGGCCAG
>site_11
ACACAGGGGCTAG
>site_12
AGTAAGGGGCGTA
>site_13
GAAAAGGGGCTTA
>site_14
TGACAGGGGCTGC
>site_15
AGAAGGGGGCTAT
>site_16
CGAAAGGGACGTG
>site_17
TCAAAGGGGTTAG
>site_18
AGAAAGGGGCAGG
>site_19
TTGAAGGGGCTTC
>site_20
CAAAAGGGGTGAC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.123236_2025-04-03.123236_7SuSOx/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.123236_2025-04-03.123236_7SuSOx/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m3_rc.png
;
a	8	2	58	1	2	48	62	1	0	17	21
c	16	22	3	6	2	14	0	2	63	14	20
g	5	25	1	57	8	2	0	60	1	16	13
t	36	16	3	1	53	1	3	2	1	18	11
//
; Sites	65
>site_0
TGAGTCAGCAT
>site_1
ATAGTATGCCC
>site_2
ACAGTCAGCCC
>site_3
CGAGGAAGCTC
>site_4
TTAGTAAGCAA
>site_5
TCCGTAAGCCC
>site_6
CCTGTAAGCGA
>site_7
CGAGGAAGCTC
>site_8
ACAGTATGCCC
>site_9
TGACTAAGCGA
>site_10
TTAGTAAGCTA
>site_11
CGAGGAAGCTC
>site_12
CCAGAAAGCGC
>site_13
TGACTAAGCGA
>site_14
TCAGTAAGCTA
>site_15
ACAGTATGCCC
>site_16
TGACTAAGCGA
>site_17
TTAGTAAGCTA
>site_18
TGAGTCAGCCA
>site_19
TGAGTCAGCGA
>site_20
TGAGTCAGCAA
>site_21
TATGTAAGCTG
>site_22
TGAGTAAGCCA
>site_23
TATGTAAGCGC
>site_24
CCAGTAAGCAT
>site_25
TCAGTGAGCCG
>site_26
GCAGTTAGCGC
>site_27
TTACTAAGCAT
>site_28
TTAGTAATCAA
>site_29
TTAGTCAGCAT
>site_30
TCGGTAAGCTC
>site_31
TCAGCAAGCAC
>site_32
CGAGGAAGCTC
>site_33
AGACTAAGCCC
>site_34
CGAGGAAGCTC
>site_35
TCAGTAAGCAG
>site_36
GCAGTAAGCTT
>site_37
TTCGTAAGCTT
>site_38
TTACTAAGCTG
>site_39
TTAGTAAACCA
>site_40
TGAGTAAGCAT
>site_41
TCAGTCAGCGG
>site_42
GCATTAAGCAA
>site_43
CGAGTAATCCA
>site_44
AGAGCAAGCGG
>site_45
CGAGGAAGCTC
>site_46
TGAGTCAGCTA
>site_47
CGAGGAAGCTC
>site_48
TTAGTAAGGGG
>site_49
TGAGTAAGCGA
>site_50
TGAGTCAGCCG
>site_51
CCAGAAAGCGC
>site_52
CCAGTGAGCGA
>site_53
TGAGTCAGCCA
>site_54
CCAGTAACCGG
>site_55
TTAGTCAGCAT
>site_56
ACAGTCAGCAG
>site_57
GTCGTAAGCAG
>site_58
GCAGTAACCCA
>site_59
ACAGTAAGTTT
>site_60
CGAGGAAGCTC
>site_61
CTAATAAGCAG
>site_62
TGAGTAAGCGG
>site_63
TTAGTCAGCAT
>site_64
TTAGTCAGCAT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.123236_2025-04-03.123236_7SuSOx/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.123236_2025-04-03.123236_7SuSOx/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m4_rc.png
;
a	11	12	1	21	31	29	34	0	1	27	2	18	9	10
c	6	4	3	2	2	1	0	1	0	2	0	2	4	11
g	6	12	29	10	0	4	0	33	33	4	31	13	12	7
t	11	6	1	1	1	0	0	0	0	1	1	1	9	6
//
; Sites	34
>site_0
AGGACAAGGAGTGT
>site_1
GGGAAAAGGAAGGA
>site_2
TCGCAAAGGAGGAA
>site_3
AGTATAAGGAGACC
>site_4
TAGGAAAGGAGATC
>site_5
CAGAAAAGAAGATC
>site_6
TGGAAAAGGAGAGT
>site_7
CTGGAAAGGAGGGA
>site_8
AGGGAAAGGAGGGT
>site_9
GGGTAAAGGAGGGA
>site_10
CTGGAAAGGAGGGT
>site_11
CTGCAGAGGAGAAG
>site_12
AGGAAAAGGGGCTC
>site_13
GGCAAAAGGAGAAG
>site_14
GCGAAAAGGAGAAA
>site_15
AAGAAAAGGGGGAG
>site_16
GAGAAAAGGATAGA
>site_17
TAGAAAAGGAGGCG
>site_18
TGGAAAACGCGAGC
>site_19
TTGAAAAGGAGGAA
>site_20
AGGAAAAGGAGGAA
>site_21
GAAAAGAGGAGACC
>site_22
AGGAACAGGAGGTA
>site_23
ACCACAAGGAGATC
>site_24
CTGAAGAGGCGAAC
>site_25
TAGAAAAGGGGCTT
>site_26
TAGGAAAGGTGAGA
>site_27
TAGGAAAGGAGATC
>site_28
TAGGAAAGGAGAGG
>site_29
AAGGAGAGGAGACG
>site_30
ACCAAAAGGAAATC
>site_31
AGGAAAAGGGGGAG
>site_32
CTGGAAAGGAGGGT
>site_33
TAGGAAAGGAGATC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.123236_2025-04-03.123236_7SuSOx/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.123236_2025-04-03.123236_7SuSOx/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2025-04-03.123248
; Job done	2025-04-03.123250
; Seconds	0.15
;	user	0.15
;	system	0.04
;	cuser	1.19
;	csystem	0.19
