; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124259_2025-04-03.124259_jkPG2v/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o $RSAT/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124259_2025-04-03.124259_jkPG2v/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124259_2025-04-03.124259_jkPG2v/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124259_2025-04-03.124259_jkPG2v/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	16	13	10	0	12	0	0	66	0	0	10	67	0	0	39	21	15
c	15	19	10	0	54	0	0	1	28	0	57	0	0	67	11	12	20
g	19	16	9	66	1	0	53	0	39	0	0	0	54	0	6	20	14
t	17	19	38	1	0	67	14	0	0	67	0	0	13	0	11	14	18
//
; Sites	67
>site_0
CGCGCTGAGTCAGCATC
>site_1
GATGCTGACTCAGCGCG
>site_2
GCTGCTTACTCAGCACA
>site_3
TGTGCTGAGTAAGCAGC
>site_4
GTTGCTTACTCAGCGCT
>site_5
AGCGCTGAGTAAGCAAC
>site_6
CGCGGTGAGTCAGCCAG
>site_7
TTTGCTTAGTCATCATT
>site_8
AATGATGACTAAGCAAA
>site_9
AATGATGAGTCAGCAGT
>site_10
ACTGCTGACTCATCATT
>site_11
TCGGCTGACTCAGCATT
>site_12
AATGCTGAGTCAGCCGA
>site_13
AGGGCTGAGTCAGCAGT
>site_14
ACTGCTGACTCAGCCCT
>site_15
GCGGCTGAGTCAGCAGG
>site_16
CCTGCTGACTCAGCCGC
>site_17
CTCGCTTAGTCATCATT
>site_18
ATTGCTGACTCAGCTTG
>site_19
CAAGCTGAGTCAGCAAT
>site_20
GGAGCTGAGTCAGCAGG
>site_21
CCTGCTGACTCAGCTCC
>site_22
GTGGCTGAGTCAGCGGG
>site_23
CCCGCTGACTCAGCCAC
>site_24
GCAGCTGAGTCAGCATC
>site_25
GATGCTGACTCAGCTGC
>site_26
TGTGATGAGTCAGCAGC
>site_27
GCTGCTGACTCATCACA
>site_28
CTCGCTTAGTCATCATT
>site_29
GTGGCTGACTCAGCCAG
>site_30
CTGGCTGAGTCAGCCAC
>site_31
GGCGATGAGTCAGCGAC
>site_32
GTTGCTGAGTCAGCAAG
>site_33
CTTGCTGACTCAGCAAC
>site_34
AATGATGAGTAAGCCAG
>site_35
GGAGCTGAGTCAGCAGT
>site_36
ACTGCTGACTCAGCTCC
>site_37
ATGGCTGAGTCAGCTAA
>site_38
TTAGCTGACTCAGCCAT
>site_39
TATGCTTAGTAATCAAT
>site_40
CTTGCTGAGTCATCACT
>site_41
AGTGATGACTCAGCAAG
>site_42
TTTGATGAGTCATCATA
>site_43
TATGATGACTCATCAAA
>site_44
TATGCTTACTCAGCGGA
>site_45
TCCGCTGAGTAAGCATA
>site_46
AATTATTAGTCAGCATG
>site_47
TCAGCTGACTCAGCAGA
>site_48
TCTGCTGAGTCAGCTGA
>site_49
TGTGCTTAGTCATCTAT
>site_50
TCTGCTGAGTAAGCGGC
>site_51
GCCGCTTACTCAGCAGA
>site_52
CGGGCTGACTCAGCTGC
>site_53
GCAGCTGAGTCAGCCCG
>site_54
GCAGCTGACTCAGCTCC
>site_55
GGAGCTGAGTCAGCTGC
>site_56
CGTGATTAGTAAGCAGA
>site_57
ATTGCTTACTCAGCAAT
>site_58
ATTGCTGAGTAAGCAAT
>site_59
TTTGCTTAGTCATCACA
>site_60
TGTGATGACTAAGCAAA
>site_61
GAAGCTGACTCATCAGT
>site_62
ACTGATGAGTCAGCTTC
>site_63
GATGCTGAGTCAGCAAG
>site_64
CTTGCTGACTCAGCATC
>site_65
TGGGCTGCGTCAGCCTG
>site_66
CTCGCTTAGTCATCACC
a	12	12	8	0	41	0	0	2	1	8	9	4
c	21	9	12	39	2	45	0	0	0	22	13	8
g	8	11	17	4	0	0	45	2	44	10	9	21
t	4	13	8	2	2	0	0	41	0	5	14	12
//
; Sites	45
>site_0
CTAGACGTGCCG
>site_1
AACCACGTGCCT
>site_2
AGGCACGTGGTT
>site_3
GGTCACGAGCGC
>site_4
GCGCTCGTGACC
>site_5
ATGCCCGTGCCT
>site_6
AGGCACGGGCAT
>site_7
CTCGACGTGCTG
>site_8
AGGCACGGGCAT
>site_9
ATGCCCGTGCCT
>site_10
CTAGACGTGCCG
>site_11
CACCACGTGTAG
>site_12
CTACACGTGGTG
>site_13
CGTCACGTGAAA
>site_14
TTTCACGTGACG
>site_15
TGGCACGTGGGG
>site_16
CCCCACGTGCCA
>site_17
ATGCACGTGCAC
>site_18
GTGCACGTGCAT
>site_19
CGACACGTGCCG
>site_20
CGGCACGTGTCG
>site_21
GCGCACGTGATG
>site_22
CATCACGTGCGC
>site_23
GCCCACGTGATT
>site_24
AATCACGTGGGC
>site_25
CTACACGTGGTG
>site_26
CACCACGTGTAG
>site_27
TTGCTCGTGCGC
>site_28
GCGCACGAGCAA
>site_29
AGTCACGTGCTG
>site_30
CAGCACGTGACT
>site_31
CCGCACGTGCCA
>site_32
TGGCACGTGCGG
>site_33
CTAGACGTGCCG
>site_34
CACCACGTGTAG
>site_35
CTACACGTGGTG
>site_36
CGCTACGTGCTG
>site_37
ACGCACGTATTC
>site_38
GAATACGTGCGT
>site_39
CACCACGTGATG
>site_40
CATCACGTGGTG
>site_41
AATCACGTGGTG
>site_42
CACCACGTGATT
>site_43
ACCCACGTGGGC
>site_44
GCCCACGTGGGT
a	10	5	9	1	1	1	0	32	0	0	25	23	10
c	13	8	4	0	31	0	0	1	28	2	7	1	1
g	4	5	4	31	0	1	1	0	3	3	0	5	10
t	6	15	16	1	1	31	32	0	2	28	1	4	12
//
; Sites	33
>site_0
GCTGCTTACTCAG
>site_1
AAAGCTTAGTATT
>site_2
GTTGCTTACTCAG
>site_3
GTTGCTTACTAAT
>site_4
CTAGCTTACTAAA
>site_5
CTAGCTTACTAAA
>site_6
ATCACTTACTAAT
>site_7
CGAGCTTACCATT
>site_8
ACTGCTTATTAGA
>site_9
CTAGCTTACTAAA
>site_10
CTAGCTTACTAAA
>site_11
CTGGCTTACTCAT
>site_12
TATGCTTAGTAAT
>site_13
ATTGATTACTAAG
>site_14
CCAGCTTAGTAAA
>site_15
ATGGTTTACTAAG
>site_16
TATGCTTACTCAG
>site_17
CATGCTGACTAAT
>site_18
ATCGCTTACTCAT
>site_19
GCCGCTTACTCAG
>site_20
TCTGCTTACTAAT
>site_21
ATTGCTTACTCAG
>site_22
CTAGCTTACTAAT
>site_23
TGTTCTTACGAAA
>site_24
CCTGCTTACGACA
>site_25
CGGGCTTACCAGG
>site_26
AGGGCATACTATT
>site_27
TATGCGTACGAGC
>site_28
ACTGCTTATTAGA
>site_29
CGAGCTTCCTATA
>site_30
CTCGCTTACTAAT
>site_31
ACTGCTTACTAGG
>site_32
TTTGCTTACTTAG
a	14	16	4	9	73	3	1	14	73	0	6	53	23	18
c	3	45	9	5	0	10	0	60	0	0	68	5	11	20
g	52	5	3	34	0	60	0	0	1	63	0	6	18	17
t	5	8	58	26	1	1	73	0	0	11	0	10	22	19
//
; Sites	74
>site_0
GCTGAGTCAGCATC
>site_1
GCTGAGTAAGCAGC
>site_2
GCTTACTCAGCACA
>site_3
GCTGAGTAAGCAAC
>site_4
GCTTACTCAGCGCT
>site_5
GGTGAGTCAGCCAG
>site_6
GCTTAGTCATCATT
>site_7
GATGAGTCAGCAGT
>site_8
GTACAGTCAGCCCA
>site_9
GCTGAGTCAGCCGA
>site_10
GCTGACTCAGCATT
>site_11
GTGAAGTCATCATT
>site_12
GCTGAGTCAGCAGT
>site_13
GATTAGTAAGCAAC
>site_14
ACCAAGTCAGAATC
>site_15
GCTGAGTCAGCAGG
>site_16
CTCGAATCAGCACA
>site_17
GCTTAGTCATCATT
>site_18
ATTTAGTAAGCTAG
>site_19
TGGAAGACAGCACA
>site_20
ATTTAGTAAGCTAG
>site_21
GATTAGTCATCATT
>site_22
GCTGAGTCAGCAAT
>site_23
GCTGAGTCAGCAGG
>site_24
GCTGAGTCAGCGGG
>site_25
GCTGAGTCAGCATC
>site_26
GATGAGTCAGCAGC
>site_27
ACCAAGTCAGAATC
>site_28
GCTTAGTCATCATT
>site_29
ATTTAGTAAGCTAG
>site_30
GCTGAGTCAGCCAC
>site_31
GATGAGTCAGCGAC
>site_32
GCTGACTCAGCAAC
>site_33
GCTGAGTCAGCAAG
>site_34
GATTAGTCATCATT
>site_35
ATTTAGTAAGCTAG
>site_36
GCTGAGTCAGCAGT
>site_37
GCTGAGTCAGCTAA
>site_38
GATGACTCAGCAAG
>site_39
GCTGAGTCATCACT
>site_40
ACCAAGTCAGAATC
>site_41
ACCAAGTCAGAATC
>site_42
GATGAGTCATCATA
>site_43
GCTGAGTAAGCATA
>site_44
GCTTACTCAGCGGA
>site_45
TATTAGTCAGCATG
>site_46
GCTGAGTCAGCTGA
>site_47
GCTGACTCAGCAGA
>site_48
AGACAGTCGGCATA
>site_49
GCTTAGTCATCTAT
>site_50
AACCAATCAGCAAC
>site_51
GCTTACTCAGCAGA
>site_52
GCTGAGTCAGCCCG
>site_53
GCTGAGTCAGCTGC
>site_54
GATTAGTAAGCAGA
>site_55
GCTGAGTAAGCAAT
>site_56
GCTTACTCAGCAAT
>site_57
GCTTAGTCATCACA
>site_58
GATGAGTCAGCTTC
>site_59
AATTAGTAAGCTAG
>site_60
GGATATTCAGCATG
>site_61
TATCAGTCAGCAGA
>site_62
GATTTGTCAGCGTT
>site_63
ACACAGTCAGCAGG
>site_64
ACCAAGTCAGAATC
>site_65
TCTTAGTCAGAACT
>site_66
GCTGACTCAGCATC
>site_67
GCTGAGTCAGCAAG
>site_68
CGGAAGTCAGCAAC
>site_69
GATTAGTAAGCGAG
>site_70
CTCGAATCAGCACA
>site_71
ACCTAGTAAGCAGT
>site_72
GCTTAGTCATCACC
>site_73
TCTAAGTAAGCAAA
a	8	3	0	23	1	0	23	0	1	11
c	7	2	0	0	0	0	0	24	1	3
g	5	8	24	1	0	21	0	0	7	5
t	4	11	0	0	23	3	1	0	15	5
//
; Sites	24
>site_0
CGGATGACTC
>site_1
ATGATGACTA
>site_2
GCGAAGACGA
>site_3
ATGATGACTT
>site_4
ATGATGACTA
>site_5
ATGATGACTA
>site_6
TGGATGACGT
>site_7
ATGATGACTA
>site_8
CCGATTACGG
>site_9
CAGATGACAT
>site_10
ATGATGACTA
>site_11
CGGGTGACGA
>site_12
CGGATGTCGA
>site_13
TGGATGACTG
>site_14
GTGATGACTC
>site_15
ATGATGACTC
>site_16
TAGATGACTA
>site_17
AGGATGACTG
>site_18
GTGATGACTA
>site_19
CAGATGACCG
>site_20
CGGATTACGT
>site_21
GTGATTACGT
>site_22
TGGATGACTG
>site_23
GTGATGACTA
; Host name	rsat
; Job started	2025-04-03.124308
; Job done	2025-04-03.124308
; Seconds	0.12
;	user	0.12
;	system	0.02
;	cuser	0
;	csystem	0
