; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124259_2025-04-03.124259_jkPG2v/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124259_2025-04-03.124259_jkPG2v/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124259_2025-04-03.124259_jkPG2v/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124259_2025-04-03.124259_jkPG2v/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124259_2025-04-03.124259_jkPG2v/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	20	15	11	0	14	0	0	67	0	0	13	67	0	1	32	23
c	14	20	9	0	52	0	0	0	40	0	53	0	1	66	11	15
g	21	14	11	67	1	0	60	0	27	1	1	0	55	0	13	20
t	12	18	36	0	0	67	7	0	0	66	0	0	11	0	11	9
//
; Sites	67
>site_0
CGCGCTGAGTCAGCAT
>site_1
GATGCTGACTCAGCGC
>site_2
GCTGCTTACTCAGCAC
>site_3
TGTGCTGAGTAAGCAG
>site_4
GTTGCTTACTCAGCGC
>site_5
AGCGCTGAGTAAGCAA
>site_6
CGCGGTGAGTCAGCCA
>site_7
CTGGCTGACTCACCGC
>site_8
AATGATGACTAAGCAA
>site_9
AATGATGAGTCAGCAG
>site_10
ACTGCTGACTCATCAT
>site_11
TCGGCTGACTCAGCAT
>site_12
AATGCTGAGTCAGCCG
>site_13
AGGGCTGAGTCAGCAG
>site_14
ACTGCTGACTCAGCCC
>site_15
GCGGCTGAGTCAGCAG
>site_16
CCTGCTGACTCAGCCG
>site_17
AATGATGACTAAGCGA
>site_18
AATGATGACTAATCGA
>site_19
ATTGCTGACTCAGCTT
>site_20
CAAGCTGAGTCAGCAA
>site_21
GGAGCTGAGTCAGCAG
>site_22
CCTGCTGACTCAGCTC
>site_23
GTGGCTGAGTCAGCGG
>site_24
CCCGCTGACTCAGCCA
>site_25
GCAGCTGAGTCAGCAT
>site_26
GATGCTGACTCAGCTG
>site_27
TGTGATGAGTCAGCAG
>site_28
GCTGCTGACTCATCAC
>site_29
AATGATGACTAAGCGA
>site_30
GTGGCTGACTCAGCCA
>site_31
CTGGCTGAGTCAGCCA
>site_32
GGCGATGAGTCAGCGA
>site_33
GTCGCTGACTCATCGC
>site_34
GTTGCTGAGTCAGCAA
>site_35
CTTGCTGACTCAGCAA
>site_36
AATGATGACTAATCGA
>site_37
CTGGCTTACTCATCAT
>site_38
GGAGCTGAGTCAGCAG
>site_39
ACTGCTGACTCAGCTC
>site_40
ATGGCTGAGTCAGCTA
>site_41
TTAGCTGACTCAGCCA
>site_42
CTTGCTGAGTCATCAC
>site_43
AGTGATGACTCAGCAA
>site_44
TATGATGACTCATCAA
>site_45
TATGCTTACTCAGCGG
>site_46
TCCGCTGAGTAAGCAT
>site_47
TCAGCTGACTCAGCAG
>site_48
TCTGCTGAGTCAGCTG
>site_49
ATAGATGACTAAGCAC
>site_50
ATCGCTTACTCATCTC
>site_51
TCTGCTGAGTAAGCGG
>site_52
GCCGCTTACTCAGCAG
>site_53
CGGGCTGACTCAGCTG
>site_54
GCAGCTGAGTCAGCCC
>site_55
GCAGCTGACTCAGCTC
>site_56
GGAGCTGAGTCAGCTG
>site_57
ATTGCTTACTCAGCAA
>site_58
ATTGCTGAGTAAGCAA
>site_59
TGTGATGACTAAGCAA
>site_60
GAAGCTGACTCATCAG
>site_61
ACTGATGAGTCAGCTT
>site_62
TCTGCTGACTGATACG
>site_63
GATGCTGAGTCAGCAA
>site_64
CTTGCTGACTCAGCAT
>site_65
CAGGCTGACGCAGCCC
>site_66
GGTGATGACTAAGCGA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124259_2025-04-03.124259_jkPG2v/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124259_2025-04-03.124259_jkPG2v/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m1_rc.png
;
a	12	22	14	4	2	25	1	0	46	0	0	25	44	2	2	19	20
c	9	9	10	4	0	19	0	0	0	32	0	19	1	1	44	6	7
g	14	7	11	5	44	0	1	40	0	14	0	1	0	38	0	12	11
t	11	8	11	33	0	2	44	6	0	0	46	1	1	5	0	9	8
//
; Sites	46
>site_0
CGATGCTGACTCAGCGC
>site_1
ATGTGCTGAGTAAGCAG
>site_2
GCCTGAATACTAAGCTT
>site_3
CAGCGCTGAGTAAGCAA
>site_4
CAATGATGACTAAGCAA
>site_5
GAATGATGAGTCAGCAG
>site_6
GTCGGCTGACTCAGCAT
>site_7
CAATGATGACTTCACCC
>site_8
GACTGCTGACTCAGCCC
>site_9
TTAAGATTAGTAAGCAA
>site_10
GCCTGCTGACTCAGCCG
>site_11
AAATGATGACTAAGCGA
>site_12
AAATGATGACTAATCGA
>site_13
TATTGCTGACTCAGCTT
>site_14
ACCTGCTGACTCAGCTC
>site_15
TCCCGCTGACTCAGCCA
>site_16
CGATGCTGACTCAGCTG
>site_17
TTGTGATGAGTCAGCAG
>site_18
AAATGATGACTAAGCGA
>site_19
CGTGGCTGACTCAGCCA
>site_20
CGGCGATGAGTCAGCGA
>site_21
GCTTGCTGACTCAGCAA
>site_22
AAATGATGACTAATCGA
>site_23
GAATGATGAGTAAGCCA
>site_24
GACTGCTGACTCAGCTC
>site_25
GATTGATTACTAAGCAT
>site_26
AAGTGATGACTCAGCAA
>site_27
CTATGATGACTCATCAA
>site_28
GATGGTTTACTAAGCTG
>site_29
TTCCGCTGAGTAAGCAT
>site_30
AATAATTGACTAAGCAG
>site_31
GCATGCTGACTAATAAT
>site_32
AATAGATGACTAAGCAC
>site_33
CGAGGATGACTGACATG
>site_34
GAGAGATGAGTAAGCGA
>site_35
ATCTGCTGAGTAAGCGG
>site_36
TATTGAGGACTATACGC
>site_37
TCGGGCTGACTCAGCTG
>site_38
TCGTGATTAGTAAGCAG
>site_39
TATTGCTGAGTAAGCAA
>site_40
TTGTGATGACTAAGCAA
>site_41
GACTGATGAGTCAGCTT
>site_42
AATTAATGACTAATCGA
>site_43
GCTTGCTGACTCAGCAT
>site_44
TGGTGATTAGTAAGCGA
>site_45
AGGTGATGACTAAGCGA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124259_2025-04-03.124259_jkPG2v/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124259_2025-04-03.124259_jkPG2v/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m2_rc.png
;
a	14	16	0	4	44	2	1	43	53	1	5	42	19	11
c	4	26	3	1	2	8	1	10	0	1	48	2	15	8
g	29	0	1	12	6	43	1	0	0	35	0	3	10	12
t	6	11	49	36	1	0	50	0	0	16	0	6	9	22
//
; Sites	53
>site_0
GCTGAGTAAGCAGC
>site_1
GCTTTGAAAGCACT
>site_2
GCTGAGTAAGCAAC
>site_3
GATGACTAAGCAAA
>site_4
GCTTAGTCATCATT
>site_5
GATGAGTCAGCAGT
>site_6
GATTAGTAAGCAAC
>site_7
ACTTGGTAATCACT
>site_8
GCTTAGTCATCATT
>site_9
ATTTAGTAAGCTAG
>site_10
ATTTAGTAAGCTAG
>site_11
GATTAGTCATCATT
>site_12
CTTAGGTAAGCATG
>site_13
TATTAGGAATCACT
>site_14
ACTTGGTAATCACT
>site_15
CTCTAATAAGCAGT
>site_16
GCTTAGTCATCATT
>site_17
ATTTAGTAAGCTAG
>site_18
GATTAGTCATCATT
>site_19
ATTTAGTAAGCTAG
>site_20
GATGAGTAAGCCAG
>site_21
GATTACTAAGCATA
>site_22
GCTTAGTAATCAAT
>site_23
ACTCAGCAAGCACC
>site_24
ACTTGGTAATCACT
>site_25
ACTTGGTAATCACT
>site_26
GATTAGTAACAAAT
>site_27
GTTTACTAAGCTGG
>site_28
GCTTAGTAAACCAT
>site_29
GCTGAGTAAGCATA
>site_30
ATTGACTAAGCAGC
>site_31
TATTAGTCAGCATG
>site_32
GATGACTAAGCACA
>site_33
GATGAGTAAGCGAT
>site_34
GCTGAGTAAGCGGC
>site_35
GCTTACTAATCACG
>site_36
GATTAGTAAGCAGA
>site_37
GCTGAGTAAGCAAT
>site_38
GATGACTAAGCAAA
>site_39
GCTTAGTCATCACA
>site_40
AATTAGTAAGCTAG
>site_41
TCTAAGTAAGAAAA
>site_42
TCTAAGTAAGAAAA
>site_43
CTTTCGTAAGAACA
>site_44
ATGTCGTAAGCAGG
>site_45
ACTTGGTAATCACT
>site_46
TCTTAGTCAGAACT
>site_47
CTCTAATAAGCAGT
>site_48
GCTTACTAATCACC
>site_49
GATTAGTAAGCGAG
>site_50
ACCTAGTAAGCAGT
>site_51
GCTTAGTCATCACC
>site_52
TCTAAGTAAGCAAA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124259_2025-04-03.124259_jkPG2v/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124259_2025-04-03.124259_jkPG2v/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m3_rc.png
;
a	8	3	1	0	17	0	0	1	0	2	5	3
c	6	4	2	20	2	20	0	0	0	15	8	3
g	3	8	15	0	0	0	20	2	20	2	4	6
t	3	5	2	0	1	0	0	17	0	1	3	8
//
; Sites	20
>site_0
AACCACGTGCCT
>site_1
AGGCACGTGGTT
>site_2
ATGCCCGTGCCT
>site_3
AGGCACGGGCAT
>site_4
AGGCACGGGCAT
>site_5
ATGCCCGTGCCT
>site_6
TGGCACGTGGGG
>site_7
CCCCACGTGCCA
>site_8
ATGCACGTGCAC
>site_9
GTGCACGTGCAT
>site_10
CGACACGTGCCG
>site_11
CGGCACGTGTCG
>site_12
GCGCACGTGATG
>site_13
CATCACGTGCGC
>site_14
TTGCTCGTGCGC
>site_15
GCGCACGAGCAA
>site_16
AGTCACGTGCTG
>site_17
CAGCACGTGACT
>site_18
CCGCACGTGCCA
>site_19
TGGCACGTGCGG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124259_2025-04-03.124259_jkPG2v/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124259_2025-04-03.124259_jkPG2v/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m4_rc.png
;
a	25	18	1	0	44	1	2	0	44	16	23
c	5	15	44	3	3	2	43	1	0	8	10
g	9	5	2	0	2	2	4	1	2	13	11
t	11	12	3	47	1	45	1	48	4	13	6
//
; Sites	50
>site_0
TCCTATCTAGA
>site_1
AACCATCTATG
>site_2
ATCCATCTATG
>site_3
ATTTATCTAAA
>site_4
CTGTATCTAGC
>site_5
AACTAGCTAGA
>site_6
TGCTACCTAAA
>site_7
TCCTCTCTACA
>site_8
GCCTATCTATA
>site_9
ATCTATCTTTC
>site_10
GCCTATCTAAA
>site_11
ATCTATCTTTC
>site_12
ATCTATCTAAA
>site_13
TCCTATCTAGA
>site_14
TACTATATATA
>site_15
CCCTTTCTAGT
>site_16
TATTATCTACG
>site_17
AGCTATCTAGT
>site_18
ATCTATCTGAT
>site_19
GAATATCTAGC
>site_20
GCCTATCTAAA
>site_21
ATCTGTCTAAC
>site_22
AGCTATGTAAG
>site_23
ACCTATCGATA
>site_24
CACTATATACT
>site_25
CCCTGTCTAAG
>site_26
TCCTCTCTACA
>site_27
GACTATTTATC
>site_28
TACTACCTATG
>site_29
TCCTATCTAGA
>site_30
ATCCATCTAAA
>site_31
GCTTATCTACT
>site_32
ATCTATCTTTC
>site_33
GCCTATCTAAA
>site_34
AACTATCTAAG
>site_35
AACTATGTAGA
>site_36
TCCTCTCTACA
>site_37
AACTAGCTAGA
>site_38
CTGTATCTAGC
>site_39
AACTATCTAAG
>site_40
TGCTATCTGTT
>site_41
AACTATCTAAG
>site_42
AACTATGTAGA
>site_43
ATCTATCTTTC
>site_44
GCCTATCCACA
>site_45
AACTAACTATC
>site_46
AACTATCTAAG
>site_47
AACTATCTAAG
>site_48
AACTATGTAGA
>site_49
GGCTATCTACA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124259_2025-04-03.124259_jkPG2v/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124259_2025-04-03.124259_jkPG2v/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2025-04-03.124312
; Job done	2025-04-03.124314
; Seconds	0.16
;	user	0.16
;	system	0.03
;	cuser	1.24
;	csystem	0.19
