; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124321_2025-04-03.124321_p2X2cO/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124321_2025-04-03.124321_p2X2cO/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124321_2025-04-03.124321_p2X2cO/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124321_2025-04-03.124321_p2X2cO/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124321_2025-04-03.124321_p2X2cO/results/oligos_6nt_mkv2/peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	11	6	9	0	0	0	0	33	0	3	20	5	7	5
c	5	10	19	12	30	1	0	0	33	0	1	0	11	11
g	11	11	0	1	0	32	0	0	0	29	12	19	10	5
t	6	6	5	20	3	0	33	0	0	1	0	9	5	12
//
; Sites	33
>site_0
AGCTCGTACGCATA
>site_1
TATGCGTACGAGCT
>site_2
GGCTCGTACGGTGT
>site_3
ACACCGTACGAGCC
>site_4
TCCTCGTACGGTCC
>site_5
GGACCGTACGAGGA
>site_6
TACTCGTACGGAGC
>site_7
GCTCCGTACGAGTA
>site_8
GGCTCGTACGGTGT
>site_9
ACACCGTACGAGCC
>site_10
TACTCCTACTAGAT
>site_11
CGCTCGTACAAGAC
>site_12
GTCTTGTACGAGCG
>site_13
CTTCCGTACGAGAT
>site_14
ATCTCGTACGGAAG
>site_15
AAATTGTACGAGCT
>site_16
AGCTCGTACAATTT
>site_17
GGCTCGTACGGTGT
>site_18
ACACCGTACGAGCC
>site_19
CACTCGTACAAGAG
>site_20
CTCTTGTACGAGTG
>site_21
ACACCGTACGAGCC
>site_22
GGCTCGTACGGTGT
>site_23
TCCTCGTACGGTCC
>site_24
GGACCGTACGAGGA
>site_25
GGCTCGTACGGTGT
>site_26
ACACCGTACGAGCC
>site_27
ATCTCGTACGGAAG
>site_28
CTTCCGTACGAGAT
>site_29
ACACCGTACGAGCC
>site_30
GGCTCGTACGGTGT
>site_31
GCTCCGTACGAGTA
>site_32
TACTCGTACGGAGC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124321_2025-04-03.124321_p2X2cO/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124321_2025-04-03.124321_p2X2cO/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m1_rc.png
;
a	4	15	2	0	0	0	33	0	4	29	5	13	10
c	10	6	25	30	3	0	0	33	1	0	0	14	8
g	5	5	1	0	30	6	0	0	28	1	22	2	5
t	14	7	5	3	0	27	0	0	0	3	6	4	10
//
; Sites	33
>site_0
TGCCGTACGTACA
>site_1
GTACGTACAAGAA
>site_2
ATGCGTACGAGCT
>site_3
TACCGGACGATAT
>site_4
CACCGTACGAGCC
>site_5
GACCGTACGAGGA
>site_6
TACCGGACGATAT
>site_7
CTCCGTACGAGTA
>site_8
CCCCCTACGAACG
>site_9
TACCGGACGATAT
>site_10
CACCGTACGAGCC
>site_11
TCTTGTACGAGCG
>site_12
GCTCGTACAAGAC
>site_13
TTCCGTACGAGAT
>site_14
TGCCCTACGAGAA
>site_15
AATTGTACGAGCT
>site_16
TACCGGACGATAT
>site_17
CACCGTACGAGCC
>site_18
TCTTGTACGAGTG
>site_19
ACTCGTACAAGAG
>site_20
CACCGTACGAGCC
>site_21
GTACGTACAAGAA
>site_22
TGCCGTACGTACA
>site_23
GACCGTACGAGGA
>site_24
CCCCCTACGAACG
>site_25
TACCGGACGATAT
>site_26
CACCGTACGAGCC
>site_27
TGCCGTACGTACA
>site_28
TTCCGTACGAGAT
>site_29
CACCGTACGAGCC
>site_30
TACCGGACGATAT
>site_31
AGCCGTACCGGTC
>site_32
CTCCGTACGAGTA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124321_2025-04-03.124321_p2X2cO/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124321_2025-04-03.124321_p2X2cO/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m2_rc.png
;
a	10	20	1	41	0	39	0	0	4	12
c	12	10	0	0	3	0	0	40	8	7
g	7	8	40	0	0	2	0	0	9	13
t	12	3	0	0	38	0	41	1	20	9
//
; Sites	41
>site_0
TGGATATCTC
>site_1
GAGATATCCA
>site_2
TAGATATCGT
>site_3
ACGATATCTA
>site_4
GAGATATCTG
>site_5
CAGATATCTC
>site_6
CAGATATCTT
>site_7
AAGATATCTG
>site_8
ACGATATCTA
>site_9
TAGATATCGT
>site_10
AGGATATCTC
>site_11
GAGATATCCT
>site_12
TCGACATCCG
>site_13
CGGATGTCGA
>site_14
TAGATATCGT
>site_15
ACGATATCTA
>site_16
GCGATATTCG
>site_17
CGAATATCGC
>site_18
CTGATATCCA
>site_19
TGGATATCAG
>site_20
GAGATATCCA
>site_21
TGGATATCTC
>site_22
TAGATATCGT
>site_23
ACGATATCTA
>site_24
CAGATATCTC
>site_25
GAGATATCTG
>site_26
CTGATATCCA
>site_27
TGGATATCAG
>site_28
TCGACATCCG
>site_29
CGGATGTCGA
>site_30
ACGACATCAG
>site_31
TAGATATCGT
>site_32
ACGATATCTA
>site_33
CTGATATCTG
>site_34
CAGATATCAG
>site_35
CAGATATCTC
>site_36
GAGATATCTG
>site_37
ACGATATCTA
>site_38
TAGATATCGT
>site_39
AAGATATCTG
>site_40
CAGATATCTT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124321_2025-04-03.124321_p2X2cO/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124321_2025-04-03.124321_p2X2cO/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m3_rc.png
;
a	10	1	24	24	23	0	0	0	8	6
c	10	15	0	0	1	0	0	24	8	11
g	2	5	0	0	0	24	24	0	4	3
t	2	3	0	0	0	0	0	0	4	4
//
; Sites	24
>site_0
ACAAAGGCGA
>site_1
ACAAAGGCCC
>site_2
CCAAAGGCGC
>site_3
TTAAAGGCTG
>site_4
CCAAAGGCAC
>site_5
CCAAAGGCAC
>site_6
AGAAAGGCAG
>site_7
ACAAAGGCCC
>site_8
AGAAAGGCTA
>site_9
ACAACGGCAC
>site_10
TGAAAGGCCT
>site_11
CCAAAGGCCA
>site_12
GCAAAGGCAT
>site_13
AAAAAGGCCT
>site_14
CCAAAGGCAC
>site_15
CCAAAGGCCA
>site_16
AGAAAGGCTC
>site_17
CCAAAGGCAC
>site_18
CCAAAGGCGC
>site_19
AGAAAGGCAG
>site_20
ATAAAGGCTA
>site_21
GTAAAGGCCT
>site_22
CCAAAGGCGC
>site_23
CCAAAGGCCA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124321_2025-04-03.124321_p2X2cO/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124321_2025-04-03.124321_p2X2cO/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m4_rc.png
;
a	2	1	9	0	0	0	9	0	1	1
c	3	5	0	0	0	9	0	9	4	0
g	0	1	0	9	0	0	0	0	3	2
t	4	2	0	0	9	0	0	0	1	6
//
; Sites	9
>site_0
TCAGTCACCT
>site_1
CTAGTCACAG
>site_2
TCAGTCACCT
>site_3
CGAGTCACTA
>site_4
AAAGTCACGT
>site_5
TCAGTCACCT
>site_6
ATAGTCACGT
>site_7
CCAGTCACGG
>site_8
TCAGTCACCT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124321_2025-04-03.124321_p2X2cO/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124321_2025-04-03.124321_p2X2cO/results/oligos_6nt_mkv2//peak-motifs_oligos-2str-noov_6nt_mkv2_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2025-04-03.124329
; Job done	2025-04-03.124331
; Seconds	0.13
;	user	0.13
;	system	0.05
;	cuser	1.2
;	csystem	0.2
