; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124321_2025-04-03.124321_p2X2cO/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf -from transfac -to tab -return counts -return sites -o $RSAT/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124321_2025-04-03.124321_p2X2cO/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124321_2025-04-03.124321_p2X2cO/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124321_2025-04-03.124321_p2X2cO/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	11	6	9	0	0	0	0	33	0	3	20	5	7	5
c	5	10	19	12	30	1	0	0	33	0	1	0	11	11
g	11	11	0	1	0	32	0	0	0	29	12	19	10	5
t	6	6	5	20	3	0	33	0	0	1	0	9	5	12
//
; Sites	33
>site_0
AGCTCGTACGCATA
>site_1
TATGCGTACGAGCT
>site_2
GGCTCGTACGGTGT
>site_3
ACACCGTACGAGCC
>site_4
TCCTCGTACGGTCC
>site_5
GGACCGTACGAGGA
>site_6
TACTCGTACGGAGC
>site_7
GCTCCGTACGAGTA
>site_8
GGCTCGTACGGTGT
>site_9
ACACCGTACGAGCC
>site_10
TACTCCTACTAGAT
>site_11
CGCTCGTACAAGAC
>site_12
GTCTTGTACGAGCG
>site_13
CTTCCGTACGAGAT
>site_14
ATCTCGTACGGAAG
>site_15
AAATTGTACGAGCT
>site_16
AGCTCGTACAATTT
>site_17
GGCTCGTACGGTGT
>site_18
ACACCGTACGAGCC
>site_19
CACTCGTACAAGAG
>site_20
CTCTTGTACGAGTG
>site_21
ACACCGTACGAGCC
>site_22
GGCTCGTACGGTGT
>site_23
TCCTCGTACGGTCC
>site_24
GGACCGTACGAGGA
>site_25
GGCTCGTACGGTGT
>site_26
ACACCGTACGAGCC
>site_27
ATCTCGTACGGAAG
>site_28
CTTCCGTACGAGAT
>site_29
ACACCGTACGAGCC
>site_30
GGCTCGTACGGTGT
>site_31
GCTCCGTACGAGTA
>site_32
TACTCGTACGGAGC
a	4	15	2	0	0	0	33	0	4	30	5	13	11
c	10	6	26	30	3	0	1	34	1	0	0	14	8
g	6	6	1	1	31	6	0	0	29	1	23	3	5
t	14	7	5	3	0	28	0	0	0	3	6	4	10
//
; Sites	34
>site_0
TGCCGTACGTACA
>site_1
GTACGTACAAGAA
>site_2
ATGCGTACGAGCT
>site_3
TACCGGACGATAT
>site_4
CACCGTACGAGCC
>site_5
GACCGTACGAGGA
>site_6
TACCGGACGATAT
>site_7
CTCCGTACGAGTA
>site_8
CCCCCTACGAACG
>site_9
TACCGGACGATAT
>site_10
CACCGTACGAGCC
>site_11
TCTTGTACGAGCG
>site_12
GCTCGTACAAGAC
>site_13
TTCCGTACGAGAT
>site_14
TGCCCTACGAGAA
>site_15
AATTGTACGAGCT
>site_16
TACCGGACGATAT
>site_17
CACCGTACGAGCC
>site_18
TCTTGTACGAGTG
>site_19
ACTCGTACAAGAG
>site_20
CACCGTACGAGCC
>site_21
GTACGTACAAGAA
>site_22
TGCCGTACGTACA
>site_23
GACCGTACGAGGA
>site_24
CCCCCTACGAACG
>site_25
GGCGGTCCGAGGA
>site_26
TACCGGACGATAT
>site_27
CACCGTACGAGCC
>site_28
TGCCGTACGTACA
>site_29
TTCCGTACGAGAT
>site_30
CACCGTACGAGCC
>site_31
TACCGGACGATAT
>site_32
AGCCGTACCGGTC
>site_33
CTCCGTACGAGTA
a	5	10	22	0	31	0	32	0	1	1	8	9
c	4	8	6	0	1	0	0	0	31	3	6	14
g	14	6	3	31	0	0	0	1	0	6	8	4
t	9	8	1	1	0	32	0	31	0	22	10	5
//
; Sites	32
>site_0
ATGGATATCTCC
>site_1
GGAGATATCCAT
>site_2
GTAGATATCGTC
>site_3
GACGATATCTAC
>site_4
TGAGATATCTGA
>site_5
TCAGATATCTCA
>site_6
GACGATATCTAC
>site_7
GTAGATATCGTC
>site_8
CAGGATATCTCC
>site_9
GGAGATATCCTG
>site_10
TCAGATATATTT
>site_11
AAATATATCTGA
>site_12
GTAGATATCGTC
>site_13
GACGATATCTAC
>site_14
AGAGATATCCAG
>site_15
CTGGATATCTCT
>site_16
CCAGCTATCTTA
>site_17
TAAGATAGCTGG
>site_18
GTAGATATCGTC
>site_19
GACGATATCTAC
>site_20
TCAGATATCTCA
>site_21
TGAGATATCTGA
>site_22
GTAGATATCGTC
>site_23
GACGATATCTAC
>site_24
ACTGATATCTGT
>site_25
ACAGATATCAGT
>site_26
TCAGATATCTCA
>site_27
TGAGATATCTGA
>site_28
GACGATATCTAC
>site_29
GTAGATATCGTC
>site_30
CAAGATATCTGA
>site_31
TCAGATATCTTG
; Host name	rsat
; Job started	2025-04-03.124332
; Job done	2025-04-03.124332
; Seconds	0.13
;	user	0.13
;	system	0
;	cuser	0
;	csystem	0
