; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124448_2025-04-03.124448_OhsrJC/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124448_2025-04-03.124448_OhsrJC/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124448_2025-04-03.124448_OhsrJC/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124448_2025-04-03.124448_OhsrJC/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124448_2025-04-03.124448_OhsrJC/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	28	12	12	41	1	0	61	0	1	44	61	0	5	24	32
c	13	6	0	18	0	0	0	49	0	17	0	0	53	8	8
g	9	4	49	0	0	56	0	12	0	0	0	46	0	22	12
t	11	39	0	2	60	5	0	0	60	0	0	15	3	7	9
//
; Sites	61
>site_0
ATGATGACTAATCGA
>site_1
ATGCTGACTCAGCGC
>site_2
GAGATGACTAAGCAA
>site_3
ATGATGAGTCAGCAG
>site_4
TGGATGACTCAGCCG
>site_5
CGGCTGACTCAGCAT
>site_6
AAGATTAGTAAGCAA
>site_7
CTGCTGACTCAGCCG
>site_8
ATGATGACTAAGCGA
>site_9
CAAATGACTCAGCAA
>site_10
ATGATGACTAATCGA
>site_11
ATGATGACTAATCGA
>site_12
CAGATGACTAATCAG
>site_13
GTGATGAGTCAGCAG
>site_14
ATGATGACTAAGCGA
>site_15
ATAATGACTAATCGA
>site_16
ATGATGACTAAGCGA
>site_17
AAGCTGAGTAAGCAG
>site_18
TGGCTGACTCAGCCA
>site_19
GCGATGAGTCAGCGA
>site_20
ATAATGACTAAGCGA
>site_21
ATGATGACTAATCGA
>site_22
ATGATGACTAATCGA
>site_23
ATGATGAGTAAGCCA
>site_24
CTGCTGACTCAGCTC
>site_25
ATAATGACTAATTGA
>site_26
ATAATGACTAAGCGA
>site_27
ATAATGACTAAGCGA
>site_28
ATAATGACTAATCGA
>site_29
TTGATTACTAAGCAT
>site_30
ACGATGACTCATCAG
>site_31
GTGATGACTCAGCAA
>site_32
TAGATGACTCAGCAA
>site_33
ATGCTGACTAAGTAC
>site_34
ATGCTGACTAAGATA
>site_35
CAAATGACTAATATC
>site_36
TGGTTTACTAAGCTG
>site_37
CCGCTGAGTAAGCAT
>site_38
TAATTGACTAAGCAG
>site_39
ATGCTGACTAATAAT
>site_40
TAGATGACTAAGCAC
>site_41
TAGCTGACTCAGCAT
>site_42
CTGAATACTAAGCTT
>site_43
ATGATGACTAAGCGC
>site_44
GCGATGACTCAGCAA
>site_45
GAGATGAGTAAGCGA
>site_46
CTGCTGAGTAAGCGG
>site_47
CAGCTGACTAAGCCC
>site_48
GTGATTAGTAAGCAG
>site_49
TTGCTGAGTAAGCAA
>site_50
ATACTGACTAAGCTA
>site_51
ATAATGACTAATTGA
>site_52
GTGATGACTAAGCAA
>site_53
CTGATGAGTCAGCTT
>site_54
CCGCTGACAAAGCCC
>site_55
TTGATGACTCAGCAA
>site_56
TTAATGACTAATCGA
>site_57
ATGCTGACTAAGACT
>site_58
CCGATGACTAATCAG
>site_59
GTGATGACTAAGCGA
>site_60
ATGCTGACTAAGACT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124448_2025-04-03.124448_OhsrJC/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124448_2025-04-03.124448_OhsrJC/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m1_rc.png
;
a	25	23	8	2	25	0	0	72	0	1	24	72	0	6	30	29
c	16	21	11	0	47	0	0	1	51	0	44	0	1	64	15	14
g	20	10	9	71	1	0	66	0	22	1	5	0	49	0	18	16
t	12	19	45	0	0	73	7	0	0	71	0	1	23	3	10	14
//
; Sites	73
>site_0
AATGATGACTAATCGA
>site_1
CGCGCTGAGTCAGCAT
>site_2
GATGCTGACTCAGCGC
>site_3
TGAGATGACTAAGCAA
>site_4
CGCGGTGAGTCAGCCA
>site_5
CTGGCTGACTCACCGC
>site_6
AATGATGAGTCAGCAG
>site_7
ACTGCTGACTCATCAT
>site_8
CTGGATGACTCAGCCG
>site_9
CCGGCTGAGTCATCCA
>site_10
TCGGCTGACTCAGCAT
>site_11
AATGCTGAGTCAGCCG
>site_12
GCGGCTGAGTCAGCAG
>site_13
CCTGCTGACTCAGCCG
>site_14
AATGATGACTAAGCGA
>site_15
ACAAATGACTCAGCAA
>site_16
GTTGCTGAGTCATTTG
>site_17
AATGATGACTAATCGA
>site_18
AATGATGACTAATCGA
>site_19
TGTGATGAGTCAGCAG
>site_20
GCTGCTGACTCATCAC
>site_21
AATGATGACTAAGCGA
>site_22
AATGATGACTAAGCGA
>site_23
TCTGCTTACTCAGCTT
>site_24
GTGGCTGACTCAGCCA
>site_25
CTGGCTGAGTCAGCCA
>site_26
GGCGATGAGTCAGCGA
>site_27
GTCGCTGACTCATCGC
>site_28
AATGATGACTAATCGA
>site_29
AATGATGACTAATCGA
>site_30
CTGGCTTACTCATCAT
>site_31
GGAGCTGAGTCAGCAG
>site_32
ACTGCTGACTCAGCTC
>site_33
CACGATGACTCATCAG
>site_34
GCTGATGAGTCATCGT
>site_35
CTTGCTGAGTCATCAC
>site_36
AGTGATGACTCAGCAA
>site_37
ATAGATGACTCAGCAA
>site_38
GTTGCTGAGTCATCTA
>site_39
AATGCTGACTAAGTAC
>site_40
AATGCTGACTAAGATA
>site_41
CCTGCTTACTGAGCAG
>site_42
TATGCTTACTCAGCGG
>site_43
TCCGCTGAGTAAGCAT
>site_44
TCCGCTGACTGATCCT
>site_45
CATGCTGACTAATAAT
>site_46
ATAGATGACTAAGCAC
>site_47
GATGCTGAGTCAGCTA
>site_48
TTAGCTGACTCAGCAT
>site_49
AATGATGACTAAGCGC
>site_50
GTTGCTGAGTCATCGC
>site_51
AGCGATGACTCAGCAA
>site_52
ATCGCTTACTCATCTC
>site_53
TCTGCTGAGTAAGCGG
>site_54
GCCGCTTACTCAGCAG
>site_55
CCAGCTGACTAAGCCC
>site_56
GTGGCTGACGCAGCAG
>site_57
CCTGCTGCGTCAGCCA
>site_58
ATTGCTTACTCAGCAA
>site_59
ATTGCTGAGTAAGCAA
>site_60
AATACTGACTAAGCTA
>site_61
TGTGATGACTAAGCAA
>site_62
GAAGCTGACTCATCAG
>site_63
ACTGATGAGTCAGCTT
>site_64
GCCGCTGACAAAGCCC
>site_65
GTTGCTGAGTCATCAA
>site_66
TTTGATGACTCAGCAA
>site_67
CATGCTGACTGATACT
>site_68
GATGCTGACTAAGACT
>site_69
TCTGCTGACTGATACG
>site_70
CCTGCTGACTGTGTTC
>site_71
GGTGATGACTAAGCGA
>site_72
GATGCTGACTAAGACT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124448_2025-04-03.124448_OhsrJC/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124448_2025-04-03.124448_OhsrJC/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m2_rc.png
;
a	16	10	21	34	1	1	62	0	0	50	64	2	1	30	32	12
c	8	18	2	12	1	6	3	9	0	15	0	1	62	3	5	8
g	12	8	34	1	2	16	0	56	1	0	0	55	0	10	12	24
t	29	29	8	18	61	42	0	0	64	0	1	7	2	22	16	21
//
; Sites	65
>site_0
TCATTTAGTAAGCTAG
>site_1
TCGATTAGTCATCATT
>site_2
GAGATGACTAAGCAAC
>site_3
ATGATGAGTCAGCAGT
>site_4
AATATTAGTATACAGC
>site_5
AAGATTAGTAAGCAAC
>site_6
ATGATGACTAAGCGAG
>site_7
TCATTTAGTAAGCTAG
>site_8
GCCATTAGTAAGCTTT
>site_9
TCATTTAGTAAGCTAG
>site_10
TCGATTAGTCATCATT
>site_11
TCATTTAGTAAGCTAG
>site_12
TCGATTAGTCATCATT
>site_13
AAGATTAGTAAGTGAT
>site_14
AATATTAGGAATCACT
>site_15
GTGATGAGTCAGCAGC
>site_16
ATGATGACTAAGCGAG
>site_17
TCATTCAGTAAGCTAA
>site_18
TTATTTAGTAAGCTAG
>site_19
ATGATGACTAAGCGAG
>site_20
TCATTTAGTAAGCTAG
>site_21
AAGCTGAGTAAGCAGA
>site_22
GCGATGAGTCAGCGAC
>site_23
TTATTTAGTAAGCTGT
>site_24
TCATTTAGTAAGCTAG
>site_25
TCGATTAGTCATCATT
>site_26
TCGATTAGTCATCATT
>site_27
TCATTTAGTAAGCTAG
>site_28
GCAAACAGTAAGCCCG
>site_29
ATGATGAGTAAGCCAG
>site_30
TTATTTAGTAAGCTAG
>site_31
TTATTTAGTAAGCTAG
>site_32
TTATTTAGTAAGCTAG
>site_33
TTATTTAGTAAGCTAG
>site_34
TTGATTACTAAGCATA
>site_35
ATGCTTAGTAATCAAT
>site_36
GGATTACGTAAGCACA
>site_37
GTACTTAGTCAGCATT
>site_38
TATCTTAGTCAGCATT
>site_39
TGGATTAGTAACAAAT
>site_40
CTGCTCAGTAAGCAGG
>site_41
CTGAGCAGTAAGCTTA
>site_42
ATGATTCGTAAGCTTA
>site_43
TGGTTTACTAAGCTGG
>site_44
CAGCTTAGTAAACCAT
>site_45
CCGCTGAGTAAGCATA
>site_46
ATTATTAGTCAGCATG
>site_47
TAGATGACTAAGCACA
>site_48
GAGATGAGTAAGCGAT
>site_49
CTGCTGAGTAAGCGGC
>site_50
GTGATTAGTAAGCAGA
>site_51
TTGCTGAGTAAGCAAT
>site_52
GTATTTAGTAAGCTAT
>site_53
TTATTTAGTAAGCTAG
>site_54
GTGATGACTAAGCAAA
>site_55
CTCATTAGTAAGCGGA
>site_56
TTAATTAGTAAGCTAG
>site_57
AGTATCAGTCAGCATG
>site_58
AGTCTTAGTCAGCATC
>site_59
CGTATCAGTCAGCAGA
>site_60
TTGGGTAGTAAGCTCT
>site_61
CGGATTCGTAAGTGAT
>site_62
TCACCTAGTAAGCAGT
>site_63
GTGATGACTAAGCGAG
>site_64
AGTCTTAGTCAGCATC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124448_2025-04-03.124448_OhsrJC/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124448_2025-04-03.124448_OhsrJC/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m3_rc.png
;
a	24	17	4	1	57	1	2	0	58	23	40
c	7	27	55	7	4	4	55	1	0	9	7
g	20	4	0	0	1	0	4	2	0	11	10
t	11	14	3	54	0	57	1	59	4	19	5
//
; Sites	62
>site_0
TCCTATCTAGA
>site_1
GCCTATCTAAA
>site_2
AACTATCTTAT
>site_3
ATCCATCTATG
>site_4
ATTTATCTAAA
>site_5
CGATATCTACA
>site_6
TCCTCTCTACA
>site_7
AACTATGTAGA
>site_8
GCCTATCTATA
>site_9
ATCTATCTTTC
>site_10
ATCCATCTATG
>site_11
GCCTATCTAAA
>site_12
GCCTATCTAAA
>site_13
ATCTATCTTTC
>site_14
CACTACCTAAA
>site_15
ATCTATCTAAA
>site_16
TCCTATCTAGA
>site_17
TACTATATATA
>site_18
CGATATCTACA
>site_19
AGCTATCTAGT
>site_20
CTATATCTAAC
>site_21
GCCTATCTATA
>site_22
AACTATGTAGA
>site_23
GCCTATCTAAA
>site_24
GCCTATCTATA
>site_25
GCCTATCTAAA
>site_26
GCCTATCTAAA
>site_27
ATCTGTCTAAC
>site_28
ACCTATCGATA
>site_29
CCCTCTCTAAA
>site_30
GCCTATCTATA
>site_31
TCCTATCTAGA
>site_32
ATCCATCTAAA
>site_33
GCCTATCTAAA
>site_34
TCTTATCTACG
>site_35
ATCCATCTATG
>site_36
CACTATATACT
>site_37
GACTATCGAGG
>site_38
CCCAATCTATA
>site_39
GACTACCTATA
>site_40
TCCTCTCTACA
>site_41
GACTATTTATC
>site_42
TACTACCTATG
>site_43
TCCTATCTAGA
>site_44
ATCCATCTAAA
>site_45
GCTTATCTACT
>site_46
ATCTATCTTTC
>site_47
GCCTATCTAAA
>site_48
GGATATCTAAT
>site_49
ATCCATCTAAA
>site_50
TCCTATCTAGA
>site_51
GCCTATCTAAA
>site_52
TCCTCTCTACA
>site_53
GACTACCTATA
>site_54
AACTATCTAAG
>site_55
ATCCATCTATG
>site_56
AACTATGTAGA
>site_57
AACTATCTAAG
>site_58
AACTATGTAGA
>site_59
GCCTATCCACA
>site_60
AACTAACTATC
>site_61
AACTATCTAAG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124448_2025-04-03.124448_OhsrJC/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124448_2025-04-03.124448_OhsrJC/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m4_rc.png
;
a	17	24	26	3	6	57	54	54	0	47	39	5
c	6	9	11	53	0	0	0	1	4	1	11	22
g	5	5	3	0	1	0	1	1	0	8	3	7
t	29	19	17	1	50	0	2	1	53	1	4	23
//
; Sites	57
>site_0
TATCTAAATAAC
>site_1
TTACTAAATGAT
>site_2
GTTCTAAATAAG
>site_3
TATCTAAATACA
>site_4
AACCTAAATAAC
>site_5
ACCCAAAATAAC
>site_6
AACCTAAATAAC
>site_7
ACCCAAAATAAC
>site_8
TTACTAAATGAT
>site_9
CAAATAAATAAT
>site_10
TATCTAAATAAC
>site_11
TTACTAAATGAT
>site_12
TATCTAAATAAC
>site_13
TTACTAAATGAT
>site_14
TATCTAAATATA
>site_15
ATACTATATATA
>site_16
GGACTAGATAGC
>site_17
ACCCAAAATAAC
>site_18
AACCTAAATAAC
>site_19
TTACTAAATAAT
>site_20
TATCTAAACAAC
>site_21
TTACTAAATGAT
>site_22
TTACTAAATAAT
>site_23
TATCTAAATAAC
>site_24
TTACTAAATGAT
>site_25
TTACTAAATGAT
>site_26
TATCTAAATAAC
>site_27
TTACTAAATAAT
>site_28
TTACTAAATAAT
>site_29
TTACTAAATAAT
>site_30
CATCTAAATACG
>site_31
TATCTAAACAAC
>site_32
TTACTAAATAAT
>site_33
AGACTAAATTAA
>site_34
TGACTAAGTACG
>site_35
CCACTATATACT
>site_36
AAAATAAATATT
>site_37
TGACTAAATGGG
>site_38
GTACTAAATCCG
>site_39
GCGATAAATAGT
>site_40
CATCTAAATACG
>site_41
TTACTAAATACT
>site_42
TATCTAAACAAC
>site_43
TTACTAAATAAT
>site_44
CATCTAAATACG
>site_45
TTACTAATTAAT
>site_46
TATCTAAACAAC
>site_47
ACCCAAAATAAC
>site_48
AACCTAAATAAC
>site_49
AGGCTAAATACT
>site_50
AATCTAAATACA
>site_51
ACGTTAAATAAT
>site_52
ACCCAAAATAAC
>site_53
AACCTAAATAAC
>site_54
GATCGAAATACT
>site_55
ACCCAAAATAAC
>site_56
CAACTAACTATC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124448_2025-04-03.124448_OhsrJC/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124448_2025-04-03.124448_OhsrJC/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2025-04-03.124502
; Job done	2025-04-03.124503
; Seconds	0.16
;	user	0.16
;	system	0.03
;	cuser	1.28
;	csystem	0.19
