; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124532_2025-04-03.124532_W6xMnm/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124532_2025-04-03.124532_W6xMnm/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124532_2025-04-03.124532_W6xMnm/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124532_2025-04-03.124532_W6xMnm/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124532_2025-04-03.124532_W6xMnm/results/oligos_7nt_mkv2/peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	25	23	21	8	3	19	0	0	77	0	1	19	77	0	6	41	23	14	16
c	15	15	25	11	1	58	0	0	0	52	0	56	0	0	66	12	15	22	25
g	24	25	13	13	72	0	0	67	0	25	1	2	0	61	0	13	21	19	15
t	13	14	18	45	1	0	77	10	0	0	75	0	0	16	5	11	18	22	21
//
; Sites	77
>site_0
AGCTGCTTACTCAGCACAT
>site_1
ATGTGCTGAGTAAGCAGCT
>site_2
GGCGGATGACTCAGCGCGG
>site_3
ATTTGCTTAGTCATCATTG
>site_4
CAATGATGACTAAGCAAAT
>site_5
GAATGATGAGTCAGCAGTA
>site_6
TACTGCTGACTCATCATTC
>site_7
ACTGGATGACTCAGCCGGA
>site_8
AACGGCTGACTCATTTTGA
>site_9
GTCGGCTGACTCAGCATTA
>site_10
TAATGCTGAGTCAGCCGAC
>site_11
GGCGGATGACTCATCGCAC
>site_12
AGCGGCTGAGTCAGCAGGC
>site_13
GCCTGCTGACTCAGCCGCT
>site_14
AAATGATGACTAAGCGAGC
>site_15
GAAAGCTGACACAGTAGCA
>site_16
TAGCACTGACGCAGCAACA
>site_17
AGCAGCTGAGTCAGCATCG
>site_18
CGATGCTGACTCAGCTGCT
>site_19
TTGTGATGAGTCAGCAGCT
>site_20
AGCTGCTGACTCATCACAA
>site_21
TGAAGATGACTCAGATTAC
>site_22
GAATGATGACTAAGCGAGC
>site_23
AAATGATGACTAAGCGAGC
>site_24
CGTGGCTGACTCAGCCAGT
>site_25
ACTGGCTGAGTCAGCCACG
>site_26
CGGCGATGAGTCAGCGACA
>site_27
TGTCGCTGACTCATCGCCG
>site_28
GGTTGCTGAGTCAGCAAGC
>site_29
GCTTGCTGACTCAGCAACC
>site_30
TCTGGCTTACTCATCATTC
>site_31
GGGAGCTGAGTCAGCAGTC
>site_32
GACTGCTGACTCAGCTCCC
>site_33
GATTGATTACTAAGCATAT
>site_34
TCATCCTGACTAAGAAGGA
>site_35
CCACGATGACTCATCAGCC
>site_36
ACGTACTTAGTCAGCATTT
>site_37
AAATGCTGACTAAGTACGT
>site_38
CAATGCTGACTAAGATATT
>site_39
ATTTGATGAGTCATCATAG
>site_40
CTATGATGACTCATCAAAT
>site_41
GCCTGCTTACTGAGCAGTA
>site_42
CTCCGCTGACTGATCCTTG
>site_43
GCATGCTGACTAATAATTG
>site_44
GTCAGATGACTCAGCATTT
>site_45
AAATGCTGAGTCATCTGAC
>site_46
TGATGCTGAGTCAGCTAAG
>site_47
CTTAGCTGACTCAGCATCA
>site_48
GGCCACTGACTCAGCAATC
>site_49
GATTGCTGAGTCAGTGGCC
>site_50
ATCTGCTGAGTAAGCGGCA
>site_51
TGCCGCTTACTCAGCAGAT
>site_52
ATCCGCTGACTCATTTATG
>site_53
GCCAGCTGACTAAGCCCTC
>site_54
CTCTGCTTACTAATCACGA
>site_55
GATTGCTTACTCAGCAATA
>site_56
TATTGCTGAGTAAGCAATC
>site_57
CGCTGCTGACTAATCTCAC
>site_58
AACGGCTGACTCAGCATCG
>site_59
CGATGCTGAGTCAGCCGTT
>site_60
TTGTGATGACTAAGCAAAT
>site_61
AGTGGCTGACTCAGCCACC
>site_62
GGTGGCTGAGTCAGCCACT
>site_63
TAGTGCTGACTCAGCAGGG
>site_64
CCCTGCTGAGTCAGCACTA
>site_65
GGATGCTGAGTCAGCAAGC
>site_66
GCTTGCTGACTCAGCATCC
>site_67
CGGCGCTGACTCAGCTAGC
>site_68
GCTAGCTGAGTCAGCGCCG
>site_69
ATCCGCTTACTCAGCGGCA
>site_70
GAGTGCTGAGTCAGAGCTT
>site_71
AAGCTCTGACTCAGCACTC
>site_72
AGCTGATGACTAAGCTGGT
>site_73
AAAGGCTGAGTCAGCACGG
>site_74
CCGTGCTGACTCAGCCTTT
>site_75
AGGTGATGACTAAGCGAGG
>site_76
AGATGCTGACTAAGACTGT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124532_2025-04-03.124532_W6xMnm/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124532_2025-04-03.124532_W6xMnm/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m1_rc.png
;
a	22	9	5	37	0	0	62	0	2	38	62	0	5	23	26
c	14	6	2	23	0	0	0	50	1	23	0	0	55	10	6
g	14	9	55	0	0	57	0	12	0	1	0	45	1	20	18
t	12	38	0	2	62	5	0	0	59	0	0	17	1	9	12
//
; Sites	62
>site_0
GTGCTGAGTAAGCAG
>site_1
GAGATGACAGAGCCG
>site_2
CGGATGACTCAGCGC
>site_3
ATGATGACTAAGCAA
>site_4
ATGATGAGTCAGCAG
>site_5
TGGATGACTCAGCCG
>site_6
CGGCTGACTCAGCAT
>site_7
CGGATGACTCATCGC
>site_8
AAGATTAGTAAGCAA
>site_9
CTGCTGACTCAGCCG
>site_10
ATGATGACTAAGCGA
>site_11
ATGATGACTAATCGA
>site_12
ATGATGACTAATCGA
>site_13
ACAATGACTAAGCGG
>site_14
CAGATGACTAATCAG
>site_15
ATGCTGACTCAGCTG
>site_16
GTGATGAGTCAGCAG
>site_17
AAGATGACTCAGATT
>site_18
ATGATGACTAAGCGA
>site_19
ATAATGACTAATCGA
>site_20
ATGATGACTAAGCGA
>site_21
TGGCTGACTCAGCCA
>site_22
GCGATGAGTCAGCGA
>site_23
TTGCTGACTCAGCAA
>site_24
ATGATGACTAATCGA
>site_25
ATGATGACTAATCGA
>site_26
ATGATGAGTAAGCCA
>site_27
CTGCTGACTCAGCTC
>site_28
GTCATGACTAATGTT
>site_29
ATAATGACTAATCGA
>site_30
TTGATTACTAAGCAT
>site_31
ACGATGACTCATCAG
>site_32
ATGCTGACTAAGTAC
>site_33
ATGCTGACTAAGATA
>site_34
ATGATGACTCATCAA
>site_35
TGGTTTACTAAGCTG
>site_36
TAATTGACTAAGCAG
>site_37
ATGCTGACTAATAAT
>site_38
CAGATGACTCAGCAT
>site_39
TAGCTGACTCAGCAT
>site_40
TTGATGACAAATAGA
>site_41
GAGATGAGTAAGCGA
>site_42
CTGCTGAGTAAGCGG
>site_43
CAGCTGACTAAGCCC
>site_44
GTGATTAGTAAGCAG
>site_45
TTGCTGAGTAAGCAA
>site_46
CTGCTGACTAATCTC
>site_47
CGGCTGACTCAGCAT
>site_48
GTGATGACTAAGCAA
>site_49
TGGCTGACTCAGCCA
>site_50
GTGCTGACTCAGCAG
>site_51
TTAATGACTAATCGA
>site_52
CGGATGACCAATCAG
>site_53
GCCATGACTAATCCT
>site_54
TTGCTGACTCAGCAT
>site_55
GCGCTGACTCAGCTA
>site_56
CCGCTGAGTAAGCGG
>site_57
CTGATGACTAAGCTG
>site_58
GTGATTAGTAAGCGA
>site_59
GTGCTGACTCAGCCT
>site_60
GTGATGACTAAGCGA
>site_61
ATGCTGACTAAGACT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124532_2025-04-03.124532_W6xMnm/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124532_2025-04-03.124532_W6xMnm/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m2_rc.png
;
a	19	18	1	3	57	4	0	46	63	1	2	38	26	15
c	6	23	5	6	4	6	1	16	0	0	59	3	7	9
g	32	3	2	18	1	53	0	0	0	59	1	6	21	22
t	6	19	55	36	1	0	62	1	0	3	1	16	9	17
//
; Sites	63
>site_0
GCTGAGTAAGCAGC
>site_1
GATGACTAAGCAAA
>site_2
GATGAGTCAGCAGT
>site_3
GATTAGTAAGCAAC
>site_4
GCTGAGTCAGCAGG
>site_5
CTCTAATAAGCAGT
>site_6
CTCTAATAAGCAGT
>site_7
ATTTAGTAAGCTAG
>site_8
ATTTAGTAAGCTAG
>site_9
ATTTAGTAAGCTAG
>site_10
GATTAGTAAGTGAT
>site_11
GCTGAGTCAGCATC
>site_12
ACTTGGTAATCACT
>site_13
GATGAGTCAGCAGC
>site_14
ATTCAGTAAGCTAA
>site_15
TCTAAGTAAGCAAA
>site_16
CTCTAATAAGCAGT
>site_17
ATTTAGTAAGCTAG
>site_18
ATTTAGTAAGCTAG
>site_19
GCTGAGTCAGCAAG
>site_20
AGTCAGCAAGCATA
>site_21
ATTTAGTAAGCTAG
>site_22
ATTTAGTAAGCTAG
>site_23
AAACAGTAAGCCCG
>site_24
GATGAGTAAGCCAG
>site_25
GCTGAGTCAGCAGT
>site_26
ATTTAGTAAGCTAG
>site_27
GATTACTAAGCATA
>site_28
GCTTAGTAATCAAT
>site_29
ATTACGTAAGCACA
>site_30
ACTTAGTCAGCATT
>site_31
TCTTAGTCAGCATT
>site_32
GCTCAGTAAGCAGG
>site_33
GAGCAGTAAGCTTA
>site_34
GATTCGTAAGCTTA
>site_35
GTTTACTAAGCTGG
>site_36
GCTTAGTAAACCAT
>site_37
ATTGACTAAGCAGC
>site_38
TATTAGTCAGCATG
>site_39
GGTTAGTAAGGGGC
>site_40
AGTTAGTTAGCTAA
>site_41
GATGAGTAAGCGAT
>site_42
GCTGAGTAAGCGGC
>site_43
CTTTTGTAAGCTAT
>site_44
GCTTAGTCAGCTGG
>site_45
GCTTACTAATCACG
>site_46
GATTAGTAAGCAGA
>site_47
GCTGAGTAAGCAAT
>site_48
GATTAGTCAGCAGC
>site_49
GATGACTAAGCAAA
>site_50
GCTGAGTCAGCACT
>site_51
AATTAGTAAGCTAG
>site_52
TCTAAGTAAGAAAA
>site_53
TATCAGTCAGCAGA
>site_54
CTTTCGTAAGAACA
>site_55
ATGTCGTAAGCAGG
>site_56
GCTGAGTCAGCAAG
>site_57
CTCTAATAAGCAGT
>site_58
GCTGAGTAAGCGGA
>site_59
GATTAGTAAGCGAG
>site_60
GCTGAGTCAGCACG
>site_61
ACCTAGTAAGCAGT
>site_62
TCTTAGTCAGCATC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124532_2025-04-03.124532_W6xMnm/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124532_2025-04-03.124532_W6xMnm/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m3_rc.png
;
a	33	30	30	10	3	25	0	0	89	0	3	25	88	0	5	37	28
c	19	15	27	13	1	65	1	0	1	60	0	64	0	1	80	16	19
g	25	26	12	16	83	0	0	80	0	29	0	1	1	55	0	22	24
t	13	19	21	51	3	0	89	10	0	1	87	0	1	34	5	15	19
//
; Sites	90
>site_0
AGCTGCTTACTCAGCAC
>site_1
ATGTGCTGAGTAAGCAG
>site_2
AAAGCCTGACTCTTCGG
>site_3
CCGCGCTGAGTCATCCG
>site_4
GGCGGATGACTCAGCGC
>site_5
ATTTGCTTAGTCATCAT
>site_6
CAATGATGACTAAGCAA
>site_7
GAATGATGAGTCAGCAG
>site_8
TACTGCTGACTCATCAT
>site_9
ACTGGATGACTCAGCCG
>site_10
TCCGGCTGAGTCATCCA
>site_11
AACGGCTGACTCATTTT
>site_12
GTCGGCTGACTCAGCAT
>site_13
TAATGCTGAGTCAGCCG
>site_14
GGCGGATGACTCATCGC
>site_15
GTGCGATGAGTCATCCG
>site_16
AGTTGCTTACTAATCTT
>site_17
AGCGGCTGAGTCAGCAG
>site_18
GCCTGCTGACTCAGCCG
>site_19
AAATGATGACTAAGCGA
>site_20
AAATGATGACTAATCGA
>site_21
AAATGATGACTAATCGA
>site_22
GAAAGCTGACACAGTAG
>site_23
CCAATCTGACACATCCG
>site_24
AGCAGCTGAGTCAGCAT
>site_25
CGATGCTGACTCAGCTG
>site_26
TTGTGATGAGTCAGCAG
>site_27
AGCTGCTGACTCATCAC
>site_28
CTCTGCTGCTTCACCGC
>site_29
TGAAGATGACTCAGATT
>site_30
GTAATCTGAGTCATCTT
>site_31
GAATGATGACTAAGCGA
>site_32
AAATAATGACTAATCGA
>site_33
AAATGATGACTAAGCGA
>site_34
CGTGGCTGACTCAGCCA
>site_35
ACTGGCTGAGTCAGCCA
>site_36
TGTCGCTGACTCATCGC
>site_37
GGTTGCTGAGTCAGCAA
>site_38
GCTTGCTGACTCAGCAA
>site_39
CTTGGCCGACTCGTCGC
>site_40
AAATGATGACTAATCGA
>site_41
AAATGATGACTAATCGA
>site_42
TCTGGCTTACTCATCAT
>site_43
GGGAGCTGAGTCAGCAG
>site_44
GACTGCTGACTCAGCTC
>site_45
AAATAATGACTAATCGA
>site_46
CCACGATGACTCATCAG
>site_47
GGCTGATGAGTCATCGT
>site_48
AAATGCTGACTAAGTAC
>site_49
CAATGCTGACTAAGATA
>site_50
ATTTGATGAGTCATCAT
>site_51
CTATGATGACTCATCAA
>site_52
CTCCGCTGACTGATCCT
>site_53
GCATGCTGACTAATAAT
>site_54
GTCAGATGACTCAGCAT
>site_55
AAATGCTGAGTCATCTG
>site_56
TGATGCTGAGTCAGCTA
>site_57
CTTAGCTGACTCAGCAT
>site_58
GGCCACTGACTCAGCAA
>site_59
GATTGCTGAGTCAGTGG
>site_60
TATCGCTTACTCATCTC
>site_61
ATCTGCTGAGTAAGCGG
>site_62
TGCCGCTTACTCAGCAG
>site_63
ATCCGCTGACTCATTTA
>site_64
GCCAGCTGACTAAGCCC
>site_65
CTCTGCTTACTAATCAC
>site_66
GATTGCTTACTCAGCAA
>site_67
TATTGCTGAGTAAGCAA
>site_68
CGCTGCTGACTAATCTC
>site_69
AACGGCTGACTCAGCAT
>site_70
CGATGCTGAGTCAGCCG
>site_71
ATTTGCTTAGTCATCAC
>site_72
TTGTGATGACTAAGCAA
>site_73
AGTGGCTGACTCAGCCA
>site_74
GGTGGCTGAGTCAGCCA
>site_75
TAGTGCTGACTCAGCAG
>site_76
CCCTGCTGAGTCAGCAC
>site_77
CAACGCTGACAAATCTG
>site_78
GGATGCTGAGTCAGCAA
>site_79
GCTTGCTGACTCAGCAT
>site_80
CGGCGCTGACTCAGCTA
>site_81
GCTAGCTGAGTCAGCGC
>site_82
ATCCGCTTACTCAGCGG
>site_83
GAGTGCTGAGTCAGAGC
>site_84
AAGCTCTGACTCAGCAC
>site_85
AGCTGATGACTAAGCTG
>site_86
AAAGGCTGAGTCAGCAC
>site_87
CCGTGCTGACTCAGCCT
>site_88
AGGTGATGACTAAGCGA
>site_89
AGATGCTGACTAAGACT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124532_2025-04-03.124532_W6xMnm/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124532_2025-04-03.124532_W6xMnm/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m4_rc.png
;
a	10	13	1	1	25	0	3	0	0	20	2	4
c	5	3	3	25	0	21	2	1	0	2	8	7
g	7	8	2	0	1	2	21	0	25	3	3	5
t	4	2	20	0	0	3	0	25	1	1	13	10
//
; Sites	26
>site_0
TATCACATGATC
>site_1
GATCATGTGATA
>site_2
AATCACATGACT
>site_3
AGTCATGTGATT
>site_4
GGTCAGGTGAGC
>site_5
GCTCACCTGACC
>site_6
AGTCACGTGTAT
>site_7
ATACACGTGACT
>site_8
GGTCGCGTGACA
>site_9
TGTCACGCGACC
>site_10
AATCACGTGGTG
>site_11
CACCACGTGATT
>site_12
GGTCAGGTGAGC
>site_13
GCTCACCTGACC
>site_14
AGTCACGTGCTG
>site_15
CAGCACGTGACT
>site_16
AATCATGTGATC
>site_17
GATCACATGATT
>site_18
AAGCACGTGAGA
>site_19
TCTCACGTGCTT
>site_20
AGTCACGTTAAA
>site_21
TTTAACGTGACT
>site_22
CACCACGTGATG
>site_23
CATCACGTGGTG
>site_24
AATCACGTGGTG
>site_25
CACCACGTGATT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124532_2025-04-03.124532_W6xMnm/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/03/peak-motifs.2025-04-03.124532_2025-04-03.124532_W6xMnm/results/oligos_7nt_mkv2//peak-motifs_oligos-2str-noov_7nt_mkv2_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2025-04-03.124545
; Job done	2025-04-03.124547
; Seconds	0.15
;	user	0.15
;	system	0.05
;	cuser	1.22
;	csystem	0.2
