; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2025/04/08/oligo-analysis_2025-04-08.043849_RDSGu6_pssm_count_matrices.tf -from transfac -to tab -return counts -o $RSAT/public_html/tmp/www-data/2025/04/08/oligo-analysis_2025-04-08.043849_RDSGu6_pssm_count_matrices.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2025/04/08/oligo-analysis_2025-04-08.043849_RDSGu6_pssm_count_matrices.tf
; Input format transfac
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2025/04/08/oligo-analysis_2025-04-08.043849_RDSGu6_pssm_count_matrices.txt
; Output format tab
; pseudo-weight 1
a 1 1 1 1 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0
c 0 0 0 0 0 1 1 0 0 0 0 1 0 0 1 1 0 0 0 1 1 0 0 1
g 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0
t 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0
//
a 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 1 0 1
c 0 0 1 1 0 0 0 0 0 0 0 1 1 1 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0
g 1 0 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 1 1 0 0 0 1 0
t 0 0 0 0 0 0 1 1 1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0
//
a 0 2 0 0 0 0 0 0 0 3 1 0 0 0 0 0 0 3 3 0 0 0 0 0 0
c 0 0 1 0 0 0 3 1 0 0 2 3 0 0 0 0 1 0 0 3 3 0 0 0 2
g 2 1 0 3 3 0 0 2 3 0 0 0 3 3 0 0 2 0 0 0 0 3 2 0 0
t 1 0 2 0 0 3 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 1 3 1
//
a 1 1 1 1 1 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0
c 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 1 1 0 0 0 1 1 0 0 1
g 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0
t 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0
//
a 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 1 1 0 0 0 2 0 0 0 1 0 0 0
c 0 1 1 0 0 1 1 0 0 0 0 0 2 1 0 0 0 0 0 0 2 1 0 0 2 2 0 0 0 0 0
g 0 0 1 2 1 0 0 1 2 1 1 1 0 1 2 1 0 2 1 0 0 1 2 0 0 0 2 1 0 0 1
t 2 1 0 0 0 1 1 1 0 1 0 0 0 0 0 1 2 0 0 1 0 0 0 0 0 0 0 0 2 2 1
//
a 0 0 1 0 2 0 1 0 0 0 3 3 0 0 0 0 1 0 0 0
c 1 1 0 1 1 2 1 0 0 0 0 0 3 3 0 0 1 1 0 0
g 1 1 2 2 0 1 1 2 1 3 0 0 0 0 3 3 0 1 2 0
t 1 1 0 0 0 0 0 1 2 0 0 0 0 0 0 0 1 1 1 3
//
a 2 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 1 2 2 0 0 0 2 1 0 0 2 0 1 0
c 0 0 1 0 0 0 2 0 0 0 0 1 0 0 1 1 1 1 1 0 1 0 0 0 2 2 0 0 1 2 1 0 0 0 0
g 0 0 1 2 1 0 0 2 2 0 0 0 1 0 1 1 1 1 1 0 0 1 0 0 0 0 2 0 0 0 1 0 0 0 1
t 0 2 0 0 1 2 0 0 0 2 2 1 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 2 1 1
//
a 1 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 1 1 1 0 0 0 1 1 0 0 1
c 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 1 0 1 1 0 1 0 0 0 1 1 0 0 0 1 1 0
g 0 0 0 1 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
t 0 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
//
a 1 3 1 3 5 0 0 0 0 0 0 0 2 2 1 1 0
c 1 1 2 2 0 5 4 0 0 0 0 5 1 1 1 1 2
g 2 0 2 0 0 0 0 5 5 0 0 0 2 2 2 1 1
t 1 1 0 0 0 0 1 0 0 5 5 0 0 0 1 2 2
//
a 0 1 0 0 1 0 1 0 1 0 0 0 2 2 0 0 0 0 1 0 0 0
c 0 1 1 1 0 1 1 1 0 0 0 0 0 0 2 2 0 0 0 1 0 0
g 1 0 1 1 1 1 0 1 1 1 0 2 0 0 0 0 2 2 0 0 1 0
t 1 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0 0 1 1 1 2
//
; Host name rsat
; Job started 2025-04-08.043908
; Job done 2025-04-08.043908
; Seconds 0.13
; user 0.13
; system 0.02
; cuser 0
; csystem 0