; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2025/04/08/oligo-analysis_2025-04-08.105248_igHQ3w_pssm_count_matrices.tf -from transfac -to tab -return counts -o $RSAT/public_html/tmp/www-data/2025/04/08/oligo-analysis_2025-04-08.105248_igHQ3w_pssm_count_matrices.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2025/04/08/oligo-analysis_2025-04-08.105248_igHQ3w_pssm_count_matrices.tf
; Input format transfac
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2025/04/08/oligo-analysis_2025-04-08.105248_igHQ3w_pssm_count_matrices.txt
; Output format tab
; pseudo-weight 1
a 5 3 0 11 11 11 0 3 4
c 2 2 11 0 0 0 11 4 3
g 1 1 0 0 0 0 0 2 2
t 3 5 0 0 0 0 0 2 2
//
a 2 0 0 6 6 0 1 3
c 0 2 0 0 0 6 2 1
g 1 1 6 0 0 0 0 0
t 3 3 0 0 0 0 3 2
//
a 3 3 0 16 0 0 8 7
c 4 3 16 0 0 16 2 2
g 4 4 0 0 0 0 0 1
t 5 6 0 0 16 0 6 6
//
a 7 4 0 13 13 0 4 6
c 2 2 13 0 0 13 3 2
g 2 0 0 0 0 0 1 4
t 2 7 0 0 0 0 5 1
//
a 1 1 0 0 0 0 2 0 1 1
c 0 0 2 0 0 2 0 0 0 0
g 0 0 0 0 2 0 0 2 0 0
t 1 1 0 2 0 0 0 0 1 1
//
; Host name rsat
; Job started 2025-04-08.105256
; Job done 2025-04-08.105256
; Seconds 0.13
; user 0.13
; system 0.02
; cuser 0
; csystem 0