RSAT - peak-motifs result

Analysis: AntpF2 (13/04/2025 00:35)

peak-motifs  -v 1 -title AntpF2 -i $RSAT/public_html/tmp/www-data/2025/04/13/peak-motifs.2025-04-13.003009_2025-04-13.003009_CgCndg/peak-motifspeak_seq -max_seq_len 1000 -markov auto -disco oligos,dyads,positions,local_words -nmotifs 10 -minol 6 -maxol 7 -no_merge_lengths -2str -origin center -motif_db DMMPMM_drosophila tf $RSAT/public_html/motif_databases/DMMPMM_drosophila/dmmpmm_PCM.tf -scan_markov 1 -task purge,seqlen,composition,disco,merge_motifs,split_motifs,motifs_vs_motifs,timelog,archive,synthesis,small_summary,motifs_vs_db,scan -prefix peak-motifs -noov -img_format png -outdir $RSAT/public_html/tmp/www-data/2025/04/13/peak-motifs.2025-04-13.003009_2025-04-13.003009_CgCndg

motif discovery
oligos_6nt_mkv4	oligos_6nt_mkv4_m1 assembly: cttatca (sig=13.99; e-value=1e-14) RC: tgataag oligos_6nt_mkv4_m2 assembly: agatac (sig=13.95; e-value=1.1e-14) RC: gtatct oligos_6nt_mkv4_m3 assembly: tacata (sig=11.48; e-value=3.3e-12) RC: tatgta oligos_6nt_mkv4_m4 assembly: gctgttc (sig=9.63; e-value=2.3e-10) RC: gaacagc oligos_6nt_mkv4_m5 assembly: cgatag (sig=8.84; e-value=1.4e-09) RC: ctatcg oligos_6nt_mkv4_m6 assembly: actcac (sig=5.49; e-value=3.2e-06) RC: gtgagt oligos_6nt_mkv4_m7 assembly: ggtcac (sig=5.00; e-value=1e-05) RC: gtgacc oligos_6nt_mkv4_m8 assembly: cttttc (sig=4.84; e-value=1.4e-05) RC: gaaaag oligos_6nt_mkv4_m9 assembly: cacgcacag (sig=4.66; e-value=2.2e-05) RC: ctgtgcgtg oligos_6nt_mkv4_m10 assembly: tatttta (sig=4.63; e-value=2.3e-05) RC: taaaata	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]
local_words_6nt	Not a single significant pattern	[local_words_6nt]
positions_6nt	positions_6nt_m1 assembly: ttaaaa (sig=1.82; e-value=0.015) RC: ttttaa positions_6nt_m2 assembly: acggtc (sig=0.31; e-value=0.49) RC: gaccgt positions_6nt_m3 assembly: cactcc (sig=0.11; e-value=0.78) RC: ggagtg positions_6nt_m4 assembly: aaaaaa (sig=0.08; e-value=0.83) RC: tttttt positions_6nt_m5 assembly: gcaacc (sig=0.02; e-value=0.95) RC: ggttgc positions_6nt_m6 : (sig=; e-value=1) RC: positions_6nt_m7 : (sig=; e-value=1) RC: positions_6nt_m8 : (sig=; e-value=1) RC: positions_6nt_m9 : (sig=; e-value=1) RC: positions_6nt_m10 : (sig=; e-value=1) RC:	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]
oligos_7nt_mkv5	oligos_7nt_mkv5_m1 assembly: agtgtgaccg (sig=16.76; e-value=1.7e-17) RC: cggtcacact oligos_7nt_mkv5_m2 assembly: aaacacaa (sig=15.21; e-value=6.2e-16) RC: ttgtgttt oligos_7nt_mkv5_m3 assembly: atctcta (sig=10.67; e-value=2.1e-11) RC: tagagat oligos_7nt_mkv5_m4 assembly: cacacgcacac (sig=10.60; e-value=2.5e-11) RC: gtgtgcgtgtg oligos_7nt_mkv5_m5 assembly: cagcaaca (sig=9.84; e-value=1.4e-10) RC: tgttgctg oligos_7nt_mkv5_m6 assembly: ctctcgctc (sig=9.54; e-value=2.9e-10) RC: gagcgagag oligos_7nt_mkv5_m7 assembly: aaacaaa (sig=9.46; e-value=3.5e-10) RC: tttgttt oligos_7nt_mkv5_m8 assembly: ccaacact (sig=9.08; e-value=8.3e-10) RC: agtgttgg oligos_7nt_mkv5_m9 assembly: tctctttc (sig=8.72; e-value=1.9e-09) RC: gaaagaga oligos_7nt_mkv5_m10 assembly: ccctctc (sig=7.76; e-value=1.7e-08) RC: gagaggg	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]
local_words_7nt	Not a single significant pattern	[local_words_7nt]
positions_7nt	positions_7nt_m1 assembly: ttttaaaa (sig=0.12; e-value=0.76) RC: ttttaaaa positions_7nt_m2 : (sig=; e-value=1) RC: positions_7nt_m3 : (sig=; e-value=1) RC: positions_7nt_m4 : (sig=; e-value=1) RC: positions_7nt_m5 : (sig=; e-value=1) RC: positions_7nt_m6 : (sig=; e-value=1) RC: positions_7nt_m7 : (sig=; e-value=1) RC: positions_7nt_m8 : (sig=; e-value=1) RC: positions_7nt_m9 : (sig=; e-value=1) RC: positions_7nt_m10 : (sig=; e-value=1) RC:	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]
dyads	dyads_m1 assembly: aacacacacacact (sig=350.00; e-value=0) RC: agtgtgtgtgtgtt dyads_m2 assembly: cctctccctctctctctcc (sig=350.00; e-value=0) RC: ggagagagagagggagagg dyads_m3 assembly: ggcagcagcag (sig=281.32; e-value=4.8e-282) RC: ctgctgctgcc dyads_m4 assembly: tgaaaataaaat (sig=275.77; e-value=1.7e-276) RC: attttattttca dyads_m5 assembly: tgaaaatataaataaaat (sig=275.77; e-value=1.7e-276) RC: attttatttatattttca dyads_m6 assembly: gcacacacaaacacaaacac (sig=350.00; e-value=0) RC: gtgtttgtgtttgtgtgtgc dyads_m7 assembly: ggagagggagagg (sig=350.00; e-value=0) RC: cctctccctctcc dyads_m8 assembly: cacacacacacaacaacaac (sig=350.00; e-value=0) RC: gttgttgttgtgtgtgtgtg dyads_m9 assembly: ccgccg (sig=180.02; e-value=9.5e-181) RC: cggcgg dyads_m10 assembly: cttttca (sig=148.78; e-value=1.7e-149) RC: tgaaaag	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]

Motif discovery
Motif 1   oligos_6nt_mkv4_m1	k-mer sig=13.99; evalue=1e-14 ysCTTATCAry RYTGATAAGSR	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ysCTTATCAry Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 181 (5.73%) Max nb of predicted sites per peak: 2  (Antp-Flag_S1_peak_634::chr2R:6645003-6645497(.)) Mean nb of predicted sites per peak: 1.05	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 2   oligos_6nt_mkv4_m2	k-mer sig=13.95; evalue=1.1e-14 atAGATACwh DWGTATCTAT	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor atAGATACwh br-Z1 br-Z1 D 7 0.6364 0.714 0.454 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 670 (21.22%) Max nb of predicted sites per peak: 7  (Antp-Flag_S1_peak_2066::chr3R:8845549-8846596(.)) Mean nb of predicted sites per peak: 1.47	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 3   oligos_6nt_mkv4_m3	k-mer sig=11.48; evalue=3.3e-12 taTAyATAya TRTATRTATA	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor taTAyATAya Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 835 (26.45%) Max nb of predicted sites per peak: 19  (Antp-Flag_S1_peak_1819::chr3L:19260418-19261673(.)) Mean nb of predicted sites per peak: 2.38	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 4   oligos_6nt_mkv4_m4	k-mer sig=9.63; evalue=2.3e-10 chGCTGTTCbb VVGAACAGCDG	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor chGCTGTTCbb Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 324 (10.26%) Max nb of predicted sites per peak: 2  (Antp-Flag_S1_peak_909::chr2R:13450461-13450937(.)) Mean nb of predicted sites per peak: 1.10	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 5   oligos_6nt_mkv4_m5	k-mer sig=8.84; evalue=1.4e-09 atCGATAGwy RWCTATCGAT	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor atCGATAGwy Dref Dref D 8 0.6667 0.919 0.613 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 615 (19.48%) Max nb of predicted sites per peak: 5  (Antp-Flag_S1_peak_3127::chrY_DS484103v1_random:1506-2801(.)) Mean nb of predicted sites per peak: 1.38	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 6   oligos_6nt_mkv4_m6	k-mer sig=5.49; evalue=3.2e-06 ayACTCAChc GDGTGAGTRT	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ayACTCAChc z z R 6 0.6000 0.920 0.552 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 688 (21.79%) Max nb of predicted sites per peak: 5  (Antp-Flag_S1_peak_643::chr2R:6749235-6749691(.)) Mean nb of predicted sites per peak: 1.34	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 7   oligos_6nt_mkv4_m7	k-mer sig=5.00; evalue=1e-05 ryGGTCACwc GWGTGACCRY	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ryGGTCACwc Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 628 (19.89%) Max nb of predicted sites per peak: 4  (Antp-Flag_S1_peak_3005::chrX:17302249-17302664(.)) Mean nb of predicted sites per peak: 1.20	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 8   oligos_6nt_mkv4_m8	k-mer sig=4.84; evalue=1.4e-05 yrCTTTTCcb VGGAAAAGYR	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor yrCTTTTCcb Kr Kr R 7 0.5385 0.760 0.409 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 1039 (32.91%) Max nb of predicted sites per peak: 6  (Antp-Flag_S1_peak_1648::chr3L:11680231-11680665(.)) Mean nb of predicted sites per peak: 1.38	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 9   oligos_6nt_mkv4_m9	k-mer sig=4.66; evalue=2.2e-05 cacACGCACAsmc GKSTGTGCGTGTG	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor cacACGCACAsmc Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 913 (28.92%) Max nb of predicted sites per peak: 56  (Antp-Flag_S1_peak_1875::chr3L:21498360-21498831(.)) Mean nb of predicted sites per peak: 3.17	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 10   oligos_6nt_mkv4_m10	k-mer sig=4.63; evalue=2.3e-05 watATTTTAww WWTAAAATATW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor watATTTTAww zen zen R 6 0.5455 0.844 0.460 NA NA ap ap R 6 0.5455 0.808 0.441 NA NA Antp Antp R 6 0.5455 0.806 0.440 NA NA Total matches= 4 (1 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 631 (19.99%) Max nb of predicted sites per peak: 7  (Antp-Flag_S1_peak_2311::chr3R:16235208-16237823(.)) Mean nb of predicted sites per peak: 1.28	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 11   positions_6nt_m1	k-mer sig=1.82; evalue=0.015 wwTTAAAAww WWTTTTAAWW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wwTTAAAAww hb hb D 9 0.9000 0.758 0.682 NA NA ftz ftz D 7 0.6364 0.750 0.477 NA NA zen zen D 6 0.6000 0.719 0.431 NA NA Total matches= 5 (2 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 958 (30.35%) Max nb of predicted sites per peak: 32  (Antp-Flag_S1_peak_1541::chr3L:8019980-8022777(.)) Mean nb of predicted sites per peak: 1.57	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 12   positions_6nt_m2	k-mer sig=0.31; evalue=0.49 vtACGGTCwc GWGACCGTAB	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor vtACGGTCwc ovo ovo R 6 0.6000 0.716 0.429 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 405 (12.83%) Max nb of predicted sites per peak: 3  (Antp-Flag_S1_peak_307::chr2L:9758053-9759263(.)) Mean nb of predicted sites per peak: 1.08	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 13   positions_6nt_m3	k-mer sig=0.11; evalue=0.78 ycCACTCCyc GRGGAGTGGR	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ycCACTCCyc z z R 6 0.6000 0.780 0.468 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 636 (20.15%) Max nb of predicted sites per peak: 4  (Antp-Flag_S1_peak_838::chr2R:11602502-11604441(.)) Mean nb of predicted sites per peak: 1.23	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 14   positions_6nt_m4	k-mer sig=0.08; evalue=0.83 aaAAAAAAaa TTTTTTTTTT	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor aaAAAAAAaa hb hb D 9 0.9000 0.817 0.735 NA NA zen zen D 6 0.6000 0.746 0.448 NA NA cad cad R 7 0.5833 0.704 0.411 NA NA Total matches= 4 (1 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 673 (21.32%) Max nb of predicted sites per peak: 15  (Antp-Flag_S1_peak_2693::chr3R:30808345-30809342(.)) Mean nb of predicted sites per peak: 3.26	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 15   positions_6nt_m5	k-mer sig=0.02; evalue=0.95 yrGCAACCmh DKGGTTGCYR	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor yrGCAACCmh grh grh D 6 0.6000 0.786 0.471 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 600 (19.01%) Max nb of predicted sites per peak: 5  (Antp-Flag_S1_peak_1106::chr2R:18334871-18336031(.)) Mean nb of predicted sites per peak: 1.17	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 16   oligos_7nt_mkv5_m1	k-mer sig=16.76; evalue=1.7e-17 tsAGTGTGACCgtg CACGGTCACACTSA	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor tsAGTGTGACCgtg Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 653 (20.68%) Max nb of predicted sites per peak: 3  (Antp-Flag_S1_peak_514::chr2L:20148393-20148695(.)) Mean nb of predicted sites per peak: 1.23	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 17   oligos_7nt_mkv5_m2	k-mer sig=15.21; evalue=6.2e-16 amAAACACAAam KTTTGTGTTTKT	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor amAAACACAAam Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 468 (14.82%) Max nb of predicted sites per peak: 3  (Antp-Flag_S1_peak_670::chr2R:7485668-7486794(.)) Mean nb of predicted sites per peak: 1.17	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 18   oligos_7nt_mkv5_m3	k-mer sig=10.67; evalue=2.1e-11 syATCTCTAtc GATAGAGATRS	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor syATCTCTAtc Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 227 (7.19%) Max nb of predicted sites per peak: 4  (Antp-Flag_S1_peak_966::chr2R:14284285-14284768(.)) Mean nb of predicted sites per peak: 1.18	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 19   oligos_7nt_mkv5_m4	k-mer sig=10.60; evalue=2.5e-11 caCACACrCACACac GTGTGTGYGTGTGTG	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor caCACACrCACACac Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 861 (27.27%) Max nb of predicted sites per peak: 57  (Antp-Flag_S1_peak_1875::chr3L:21498360-21498831(.)) Mean nb of predicted sites per peak: 6.35	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 20   oligos_7nt_mkv5_m5	k-mer sig=9.84; evalue=1.4e-10 arCAGCAACArc GYTGTTGCTGYT	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor arCAGCAACArc Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 843 (26.70%) Max nb of predicted sites per peak: 26  (Antp-Flag_S1_peak_1951::chr3R:5085419-5085837(.)) Mean nb of predicted sites per peak: 2.68	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 21   oligos_7nt_mkv5_m6	k-mer sig=9.54; evalue=2.9e-10 ctCTCTCkCTCtc GAGAGMGAGAGAG	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ctCTCTCkCTCtc Trl Trl D 12 0.8571 0.852 0.730 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 798 (25.28%) Max nb of predicted sites per peak: 52  (Antp-Flag_S1_peak_1916::chr3R:3344640-3345130(.)) Mean nb of predicted sites per peak: 4.65	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 22   oligos_7nt_mkv5_m7	k-mer sig=9.46; evalue=3.5e-10 awAAACAAAwa TWTTTGTTTWT	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor awAAACAAAwa br-Z1 br-Z1 D 8 0.7273 0.719 0.523 NA NA hb hb D 8 0.6667 0.736 0.490 NA NA pan pan D 6 0.5455 0.822 0.448 NA NA Total matches= 4 (1 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 834 (26.42%) Max nb of predicted sites per peak: 6  (Antp-Flag_S1_peak_2794::chrX:61200-63508(.)) Mean nb of predicted sites per peak: 1.34	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 23   oligos_7nt_mkv5_m8	k-mer sig=9.08; evalue=8.3e-10 yrCCAACACTsm KSAGTGTTGGYR	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor yrCCAACACTsm Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 411 (13.02%) Max nb of predicted sites per peak: 3  (Antp-Flag_S1_peak_794::chr2R:10533082-10536374(.)) Mean nb of predicted sites per peak: 1.11	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 24   oligos_7nt_mkv5_m9	k-mer sig=8.72; evalue=1.9e-09 tyTCTCTyTCtc GAGARAGAGARA	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor tyTCTCTyTCtc Trl Trl D 12 0.9231 0.773 0.714 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 713 (22.58%) Max nb of predicted sites per peak: 50  (Antp-Flag_S1_peak_1916::chr3R:3344640-3345130(.)) Mean nb of predicted sites per peak: 3.65	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 25   oligos_7nt_mkv5_m10	k-mer sig=7.76; evalue=1.7e-08 ctCcCTCTCyc GRGAGAGGGAG	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ctCcCTCTCyc Trl Trl D 11 0.8462 0.815 0.690 NA NA z z R 6 0.5455 0.773 0.422 NA NA Total matches= 2		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 737 (23.34%) Max nb of predicted sites per peak: 45  (Antp-Flag_S1_peak_1916::chr3R:3344640-3345130(.)) Mean nb of predicted sites per peak: 3.46	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 26   positions_7nt_m1	k-mer sig=0.12; evalue=0.76 wwTTTTAAAAww WWTTTTAAAAWW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wwTTTTAAAAww Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 188 (5.96%) Max nb of predicted sites per peak: 14  (Antp-Flag_S1_peak_1541::chr3L:8019980-8022777(.)) Mean nb of predicted sites per peak: 2.33	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 27   dyads_m1	k-mer sig=350.00; evalue=0 cacACACACACACACaca TGTGTGTGTGTGTGTGTG	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor cacACACACACACACaca Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 818 (25.91%) Max nb of predicted sites per peak: 58  (Antp-Flag_S1_peak_1875::chr3L:21498360-21498831(.)) Mean nb of predicted sites per peak: 7.56	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 28   dyads_m2	k-mer sig=350.00; evalue=0 tcyCtCTCyCTCTCTCTCTCyct AGRGAGAGAGAGAGRGAGAGRGA	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor tcyCtCTCyCTCTCTCTCTCyct Trl Trl D 13 0.5652 0.858 0.485 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 663 (21.00%) Max nb of predicted sites per peak: 57  (Antp-Flag_S1_peak_1916::chr3R:3344640-3345130(.)) Mean nb of predicted sites per peak: 8.35	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 29   dyads_m3	k-mer sig=281.32; evalue=4.8e-282 gcrGCAGCAGCAGca TGCTGCTGCTGCYGC	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor gcrGCAGCAGCAGca Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 799 (25.31%) Max nb of predicted sites per peak: 29  (Antp-Flag_S1_peak_1009::chr2R:15734750-15735618(.)) Mean nb of predicted sites per peak: 2.70	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 30   dyads_m4	k-mer sig=275.77; evalue=1.7e-276 wwtGAAAATAAAATww WWATTTTATTTTCAWW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wwtGAAAATAAAATww Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 792 (25.09%) Max nb of predicted sites per peak: 8  (Antp-Flag_S1_peak_3055::chrY:864824-866674(.)) Mean nb of predicted sites per peak: 1.46	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 31   dyads_m5	k-mer sig=275.77; evalue=1.7e-276 wwtgAAAATAtAAATAAAatww WWATTTTATTTATATTTTCAWW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wwtgAAAATAtAAATAAAatww Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 1031 (32.66%) Max nb of predicted sites per peak: 26  (Antp-Flag_S1_peak_1819::chr3L:19260418-19261673(.)) Mean nb of predicted sites per peak: 2.27	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 32   dyads_m6	k-mer sig=350.00; evalue=0 acrCACACACACACACACACACac GTGTGTGTGTGTGTGTGTGTGYGT	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor acrCACACACACACACACACACac Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 720 (22.81%) Max nb of predicted sites per peak: 59  (Antp-Flag_S1_peak_1875::chr3L:21498360-21498831(.)) Mean nb of predicted sites per peak: 8.82	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 33   dyads_m7	k-mer sig=350.00; evalue=0 agrGAGAGrGAGAGrga TCYCTCTCYCTCTCYCT	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor agrGAGAGrGAGAGrga Trl Trl R 13 0.7647 0.843 0.645 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 778 (24.64%) Max nb of predicted sites per peak: 52  (Antp-Flag_S1_peak_1916::chr3R:3344640-3345130(.)) Mean nb of predicted sites per peak: 5.58	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 34   dyads_m8	k-mer sig=350.00; evalue=0 CaCACACACACACAcmmACAmmca TGKKTGTKKGTGTGTGTGTGTGTG	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor CaCACACACACACAcmmACAmmca Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 740 (23.44%) Max nb of predicted sites per peak: 60  (Antp-Flag_S1_peak_1875::chr3L:21498360-21498831(.)) Mean nb of predicted sites per peak: 7.57	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 35   dyads_m9	k-mer sig=180.02; evalue=9.5e-181 skCCGCCGmc GKCGGCGGMS	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor skCCGCCGmc Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 934 (29.59%) Max nb of predicted sites per peak: 8  (Antp-Flag_S1_peak_2815::chrX:764439-765454(.)) Mean nb of predicted sites per peak: 1.43	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 36   dyads_m10	k-mer sig=148.78; evalue=1.7e-149 yhCTTTTCaby RVTGAAAAGDR	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor yhCTTTTCaby Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 383 (12.13%) Max nb of predicted sites per peak: 3  (Antp-Flag_S1_peak_591::chr2L:21527283-21528413(.)) Mean nb of predicted sites per peak: 1.16	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]

Command:  peak-motifs  -v 1 -title AntpF2 -i $RSAT/public_html/tmp/www-data/2025/04/13/peak-motifs.2025-04-13.003009_2025-04-13.003009_CgCndg/peak-motifspeak_seq -max_seq_len 1000 -markov auto -disco oligos,dyads,positions,local_words -nmotifs 10 -minol 6 -maxol 7 -no_merge_lengths -2str -origin center -motif_db DMMPMM_drosophila tf $RSAT/public_html/motif_databases/DMMPMM_drosophila/dmmpmm_PCM.tf -scan_markov 1 -task purge,seqlen,composition,disco,merge_motifs,split_motifs,motifs_vs_motifs,timelog,archive,synthesis,small_summary,motifs_vs_db,scan -prefix peak-motifs -noov -img_format png -outdir $RSAT/public_html/tmp/www-data/2025/04/13/peak-motifs.2025-04-13.003009_2025-04-13.003009_CgCndg

Warning: Not a single pattern was found in file tmp/www-data/2025/04/13/peak-motifs.2025-04-13.003009_2025-04-13.003009_CgCndg/results/local_words_6nt/peak-motifs_local_words-2str-noov_6nt_windgroup50.tab

Warning: Not a single pattern was found in file tmp/www-data/2025/04/13/peak-motifs.2025-04-13.003009_2025-04-13.003009_CgCndg/results/local_words_7nt/peak-motifs_local_words-2str-noov_7nt_windgroup50.tab