; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/04/23/oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/04/23/oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/04/23/oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/04/23/oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/04/23/oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	54	56	26	22	8	8	11	13	13	10	19	14	12	84	55
c	126	84	265	248	14	285	284	13	269	275	16	268	66	94	142
g	90	140	17	37	294	15	23	290	19	20	278	24	226	104	73
t	56	46	18	19	10	18	8	10	25	21	13	20	22	44	56
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m1_rc.png
;
a	36	26	27	19	14	16	22	14	8	17	9	9	13	13	15	9	10	22	21	17	22	22	32	37
c	58	83	32	24	152	24	90	152	27	21	171	25	16	164	19	16	165	97	22	82	29	26	106	55
g	83	61	138	140	18	155	77	20	165	162	7	165	158	15	165	174	20	67	144	35	140	140	44	86
t	28	35	8	22	21	10	16	19	5	5	18	6	18	13	6	6	10	19	18	71	14	17	23	27
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m2_rc.png
;
a	136	154	728	37	42	776	24	54	807	35	73	733	153	167
c	234	443	66	86	803	39	63	815	31	60	772	59	201	412
g	394	244	65	769	65	49	815	51	47	807	61	67	425	209
t	177	100	82	49	31	77	39	21	56	39	35	82	162	153
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m3_rc.png
;
a	59	91	54	28	28	26	14	14	23	18	16	15	11	84	91	54
c	195	142	133	410	30	395	420	33	381	410	18	392	404	222	150	207
g	124	173	225	24	395	27	32	410	50	28	413	45	40	127	134	130
t	103	75	69	19	28	33	15	24	27	25	34	29	26	48	106	90
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m4_rc.png
;
a	68	191	20	19	374	8	10	390	6	17	388	10	25	215	60
c	221	78	256	392	20	36	419	20	35	415	21	31	383	76	107
g	99	90	148	34	27	392	15	20	399	12	15	391	29	78	215
t	64	93	28	7	31	16	8	22	12	8	28	20	15	83	70
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m5_rc.png
;
a	22	26	13	12	68	20	8	9	5	7	13	20	3	14	7	5	11	14	6	16	25	12	13	18	19
c	52	36	122	112	25	112	53	11	142	141	13	130	135	7	135	131	11	72	117	17	106	49	30	80	73
g	64	83	17	24	65	13	85	143	14	11	136	10	24	139	13	26	139	17	28	129	18	85	112	40	53
t	31	24	17	21	11	24	23	6	8	10	7	9	7	9	14	7	8	66	18	7	20	23	14	31	24
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m6_rc.png
;
a	75	94	13	9	366	9	6	18	16	3	122	86
c	178	94	391	405	23	19	394	10	370	408	86	119
g	113	128	13	19	27	24	29	383	23	13	136	113
t	70	120	19	3	20	384	7	25	27	12	92	118
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m7_rc.png
;
a	47	38	28	20	22	25	21	9	17	13	10	19	12	12	32	15	5	91	33	27
c	62	87	35	27	166	24	116	193	13	22	215	18	21	210	14	18	217	34	51	123
g	98	72	169	180	32	172	83	21	204	200	7	198	195	15	191	199	14	89	113	63
t	36	46	11	16	23	22	23	20	9	8	11	8	15	6	6	11	7	29	46	30
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m8_rc.png
;
a	66	79	7	6	13	12	10	18	17	11	95	68
c	125	126	379	9	349	371	17	26	30	375	117	151
g	161	122	13	380	31	9	369	348	345	16	111	114
t	60	85	13	17	19	20	16	20	20	10	89	79
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m9_rc.png
;
a	15	26	6	3	130	4	1	6	3	2	117	20	26
c	45	24	114	125	2	121	5	5	128	132	5	45	50
g	54	46	6	8	3	3	127	122	5	4	11	37	49
t	24	42	12	2	3	10	5	5	2	0	5	36	13
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m10.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m10_rc.png
;
a	28	49	79	12	13	9	6	16	6	8	8	5	20	23	17	26	20	16	53	39
c	69	114	100	15	210	204	17	206	216	11	211	218	24	82	183	38	183	157	75	102
g	131	61	38	223	16	11	220	21	19	226	20	20	198	125	28	173	27	45	92	67
t	27	31	38	5	16	31	12	12	14	10	16	12	13	25	27	18	25	37	35	47
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m11.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m11_rc.png
;
a	31	73	35	14	23	18	11	12	14	15	12	11	6	161	39	28	66
c	125	76	77	258	18	259	254	16	238	258	10	249	272	45	66	132	85
g	77	104	157	14	242	9	23	260	27	13	251	22	15	75	45	87	112
t	68	48	32	15	18	15	13	13	22	15	28	19	8	20	151	54	38
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m12.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m12_rc.png
;
a	137	62	11	32	18	13	378	12	11	399	85	70
c	96	131	378	13	379	406	12	22	408	12	111	186
g	114	124	34	367	30	12	26	382	10	11	157	114
t	91	121	15	26	11	7	22	22	9	16	85	68
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m13.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m13_rc.png
;
a	63	55	43	144	14	12	27	17	18	23	12	16	23	20	39	50	67
c	117	74	44	86	22	22	271	19	36	266	23	21	257	16	173	109	80
g	76	167	204	40	280	275	10	280	253	18	277	272	24	273	81	90	134
t	67	27	32	53	7	14	15	7	16	16	11	14	19	14	30	74	42
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m14.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m14_rc.png
;
a	23	39	13	12	90	19	10	10	8	7	13	13	7	16	8	6	19	14	14	92	42	22
c	70	33	131	147	27	138	57	18	172	165	12	164	176	6	152	162	17	74	145	24	81	83
g	73	88	33	27	66	18	111	157	10	16	167	9	14	167	19	24	146	31	28	67	45	62
t	34	40	23	14	17	25	22	15	10	12	8	14	3	11	21	8	18	81	13	17	32	33
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m15.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m15_rc.png
;
a	45	68	11	6	32	3	2	205	4	11	197	36	35
c	73	40	179	208	5	7	216	6	4	205	7	71	98
g	60	52	28	5	6	213	8	2	215	5	8	85	51
t	48	66	8	7	183	3	0	13	3	5	14	34	42
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m16.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m16_rc.png
;
a	110	120	9	22	50	10	12	440	15	15	149	89
c	128	147	513	32	15	513	21	22	481	16	114	217
g	227	173	18	483	451	12	514	67	24	505	192	151
t	87	112	12	15	36	17	5	23	32	16	97	95
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m17.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m17_rc.png
;
a	143	111	36	34	24	20	50	31	28	22	26	42	147	88
c	194	253	59	66	568	56	467	539	37	49	531	468	140	242
g	180	134	527	503	22	532	86	37	560	555	64	104	223	166
t	131	150	26	45	34	40	45	41	23	22	27	34	138	152
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m18.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m18_rc.png
;
a	111	76	7	344	11	10	37	22	7	20	103	65
c	95	114	409	16	17	411	18	28	422	13	101	185
g	147	181	26	67	397	10	368	376	6	399	153	119
t	89	71	0	15	17	11	19	16	7	10	85	73
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m19.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m19_rc.png
;
a	73	78	7	12	13	15	10	26	12	19	102	61
c	111	131	390	18	32	376	16	22	35	366	97	132
g	157	135	10	372	351	11	379	342	360	16	126	141
t	74	71	8	13	19	13	10	25	8	14	90	81
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m20.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/23//oligo-analysis_2025-04-23.101427_jnB49Y_pssm_count_matrices_logo_m20_rc.png
;
; Host name	rsat
; Job started	2025-04-23.101440
; Job done	2025-04-23.101446
; Seconds	0.36
;	user	0.36
;	system	0.23
;	cuser	5.12
;	csystem	1.01