; convert-matrix -v 1 -i $RSAT/public_html/tmp/www-data/2025/04/24/oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/04/24/oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/04/24/oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_links.txt
; Input files
; input /var/www/html/rsat/public_html/tmp/www-data/2025/04/24/oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices.tf
; Input format tf
; Output files
; output /var/www/html/rsat/public_html/tmp/www-data/2025/04/24/oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_links.txt
; Output format tab
; pseudo-weight 1
a 99 100 22 19 19 17 16 17 13 12 144 97
c 279 142 548 552 26 556 580 12 547 566 146 236
g 138 279 33 31 564 30 16 567 39 30 240 168
t 114 109 27 28 21 27 18 34 31 22 100 129
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m1_rc.png
;
a 22 16 16 8 14 3 13 4 5 11 4 5 6 5 14 12 9 4 10 12 30 16
c 54 40 79 28 107 13 93 110 3 90 113 16 31 125 10 20 113 13 92 31 52 46
g 46 52 31 92 13 113 20 10 125 31 16 113 90 3 110 93 13 107 28 79 40 54
t 16 30 12 10 4 9 12 14 5 6 5 4 11 5 4 13 3 14 8 16 16 22
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m2_rc.png
;
a 50 54 27 5 12 201 7 8 209 11 8 186 11 55 61
c 78 74 15 198 210 8 17 217 13 14 218 15 176 79 54
g 64 58 15 22 14 12 203 10 6 207 10 21 40 56 65
t 49 55 184 16 5 20 14 6 13 9 5 19 14 51 61
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m3_rc.png
;
a 76 92 15 6 8 350 10 12 29 11 111 104
c 118 104 25 359 10 17 15 14 332 34 93 88
g 140 120 20 18 370 8 349 342 11 328 116 112
t 56 74 330 7 2 15 16 22 18 17 70 86
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m4_rc.png
;
a 27 10 19 8 6 5 12 2 1 12 4 5 5 2 9 8 5 8 56 17 27
c 46 50 49 24 109 7 80 107 3 75 108 15 21 116 19 18 113 13 30 49 39
g 36 46 46 75 8 109 21 9 120 28 12 102 89 5 95 89 5 99 29 39 49
t 17 20 12 19 3 5 13 8 2 11 2 4 11 3 3 11 3 6 11 21 11
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m5_rc.png
;
a 8 16 37 5 2 9 1 4 7 3 1 5 0 10 6 6 3 7 13 17 9
c 41 33 29 84 3 72 84 1 69 83 10 27 101 9 15 88 6 71 38 34 37
g 32 42 30 8 93 19 11 99 23 13 90 64 3 85 74 8 87 24 40 39 34
t 23 13 8 7 6 4 8 0 5 5 3 8 0 0 9 2 8 2 13 14 24
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m6.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m6_rc.png
;
a 39 45 33 10 16 143 11 10 21 10 6 19 6 15 34 27 51 55
c 114 69 39 192 22 35 218 8 25 240 16 18 238 12 162 66 79 75
g 60 108 65 29 218 68 16 238 204 9 231 212 13 220 51 140 98 80
t 53 44 129 35 10 20 21 10 16 7 13 17 9 19 19 33 38 56
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m7.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m7_rc.png
;
a 101 120 40 2 20 480 21 19 460 22 112 142
c 186 154 24 484 20 10 465 9 14 455 125 106
g 146 155 20 31 475 16 23 494 36 36 193 132
t 99 103 448 15 17 26 23 10 22 19 102 152
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m8.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m8_rc.png
;
a 125 111 42 21 27 43 13 22 434 32 43 413 134 111
c 126 143 34 396 429 23 29 462 26 38 66 37 138 164
g 164 138 37 66 38 26 462 29 23 429 396 34 143 126
t 111 134 413 43 32 434 22 13 43 27 21 42 111 125
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m9.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m9_rc.png
;
a 33 16 6 15 7 6 79 2 8 80 6 6 11 6 8 69 19 14
c 32 28 12 69 8 87 5 6 85 3 6 86 10 80 14 7 24 36
g 20 35 78 10 80 7 9 91 8 5 83 4 4 13 77 11 40 35
t 17 23 6 8 7 2 9 3 1 14 7 6 77 3 3 15 19 17
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m10.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m10_rc.png
;
a 87 59 50 22 22 14 23 8 15 15 10 40 199 44 75
c 81 137 168 17 347 24 19 352 27 11 346 230 35 135 103
g 152 108 125 322 4 326 325 9 328 345 18 90 104 110 146
t 63 79 40 22 10 19 16 14 13 12 9 23 45 94 59
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m11.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m11_rc.png
;
a 30 27 11 5 0 2 5 0 5 10 14 38 32
c 44 65 27 18 155 1 5 153 3 138 23 37 52
g 47 31 108 4 3 154 5 3 149 6 108 59 36
t 38 36 13 132 1 2 144 3 2 5 14 25 39
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m12.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m12_rc.png
;
a 7 8 4 1 5 0 1 2 1 4 1 0 2 3 5 3 6 0 0 3 1 3 6 1 3 10 3 5 7
c 19 9 15 13 31 4 33 31 2 31 37 4 14 37 6 11 28 5 36 8 6 32 5 3 28 4 19 19 15
g 12 11 21 25 3 38 6 5 39 6 4 39 25 0 30 26 4 35 4 5 33 5 5 37 9 14 17 13 9
t 5 15 3 4 4 1 3 5 1 2 1 0 2 3 2 3 5 3 3 27 3 3 27 2 3 15 4 6 12
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m13.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m13_rc.png
;
a 89 77 29 9 20 351 28 21 45 17 34 367 68 93
c 170 160 31 402 45 30 381 21 21 390 374 24 150 134
g 109 141 47 24 390 36 18 400 361 29 44 39 138 168
t 97 87 358 30 10 48 38 23 38 29 13 35 109 70
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m14.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m14_rc.png
;
a 68 61 26 181 15 13 32 16 20 15 18 19 33 30 66 68
c 85 102 229 47 298 15 43 318 29 27 308 19 250 60 105 111
g 122 111 83 89 23 310 264 5 294 289 16 294 48 224 134 108
t 81 82 18 39 20 18 17 17 13 25 14 24 25 42 51 69
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m15.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m15_rc.png
;
a 59 42 39 16 19 8 13 9 7 17 12 9 100 46 65
c 94 109 135 38 260 4 259 257 4 223 268 16 96 135 81
g 85 81 77 223 7 274 13 15 278 33 9 263 60 73 110
t 58 64 45 19 10 10 11 15 7 23 7 8 40 42 40
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m16.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m16_rc.png
;
a 8 10 11 7 2 32 4 7 3 4 2 2 4 2 2 1 1 8 5 5 2 6 6 17 8
c 22 27 16 43 39 11 14 58 7 49 52 1 47 53 12 16 63 8 13 57 2 43 18 25 27
g 28 19 16 13 16 17 49 2 54 11 8 63 13 11 52 41 2 50 45 4 57 14 36 17 21
t 9 11 24 4 10 7 0 0 3 3 5 1 3 1 1 9 1 1 4 1 6 4 7 8 11
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m17.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m17_rc.png
;
a 37 27 27 15 9 178 5 5 190 5 7 152 7 39 67
c 71 80 15 160 185 7 9 189 5 9 187 16 148 83 37
g 51 62 140 21 11 8 185 8 3 187 7 20 41 52 54
t 49 39 26 12 3 15 9 6 10 7 7 20 12 34 50
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m18.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m18_rc.png
;
a 113 123 405 37 31 48 15 21 452 40 51 424 127 101
c 133 180 34 398 424 18 26 472 24 41 73 38 132 164
g 163 148 37 67 37 27 469 28 18 430 383 22 167 142
t 122 80 55 29 39 438 21 10 37 20 24 47 105 124
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m19.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m19_rc.png
;
a 223 254 49 14 34 976 63 33 114 238 237
c 405 348 50 1091 40 71 955 47 923 384 306
g 301 344 43 46 1079 55 92 1037 75 309 407
t 245 228 1032 23 21 72 64 57 62 243 224
//
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m20.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/24//oligo-analysis_2025-04-24.133149_6CESlp_pssm_count_matrices_logo_m20_rc.png
;
; Host name rsat
; Job started 2025-04-24.133159
; Job done 2025-04-24.133205
; Seconds 0.37
; user 0.37
; system 0.17
; cuser 5.37
; csystem 0.79