RSAT - peak-motifs result

Analysis: tna-wd (26/04/2025 03:02)

peak-motifs  -v 1 -title tna-wd -i $RSAT/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.030005_2025-04-26.030005_uHCQ4m/peak-motifspeak_seq -max_seq_len 1000 -markov auto -disco oligos,dyads,positions,local_words -nmotifs 10 -minol 6 -maxol 7 -no_merge_lengths -2str -origin center -motif_db DMMPMM_drosophila tf $RSAT/public_html/motif_databases/DMMPMM_drosophila/dmmpmm_PCM.tf -scan_markov 1 -task purge,seqlen,composition,disco,merge_motifs,split_motifs,motifs_vs_motifs,timelog,archive,synthesis,small_summary,motifs_vs_db,scan -prefix peak-motifs -noov -img_format png -outdir $RSAT/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.030005_2025-04-26.030005_uHCQ4m

motif discovery
oligos_6nt_mkv2	oligos_6nt_mkv2_m1 assembly: cgatactatcgatagtatcg (sig=30.01; e-value=9.8e-31) RC: cgatactatcgatagtatcg oligos_6nt_mkv2_m2 assembly: aacatcgatagtatcga (sig=30.01; e-value=9.8e-31) RC: tcgatactatcgatgtt oligos_6nt_mkv2_m3 assembly: gcgatagtatcgatactatc (sig=30.01; e-value=9.8e-31) RC: gatagtatcgatactatcgc oligos_6nt_mkv2_m4 assembly: aaaatat (sig=3.16; e-value=0.00069) RC: atatttt oligos_6nt_mkv2_m5 assembly: aaggag (sig=2.47; e-value=0.0034) RC: ctcctt oligos_6nt_mkv2_m6 assembly: gccgccca (sig=2.12; e-value=0.0076) RC: tgggcggc oligos_6nt_mkv2_m7 assembly: ataaatat (sig=1.94; e-value=0.011) RC: atatttat oligos_6nt_mkv2_m8 assembly: aggtgg (sig=1.73; e-value=0.019) RC: ccacct oligos_6nt_mkv2_m9 assembly: aagaaa (sig=1.18; e-value=0.066) RC: tttctt oligos_6nt_mkv2_m10 assembly: ccgatagtatcgatactatc (sig=30.01; e-value=9.8e-31) RC: gatagtatcgatactatcgg	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]
local_words_6nt	Not a single significant pattern	[local_words_6nt]
positions_6nt	positions_6nt_m1 assembly: ctatcgatag (sig=8.74; e-value=1.8e-09) RC: ctatcgatag positions_6nt_m2 assembly: ctatcgatac (sig=8.74; e-value=1.8e-09) RC: gtatcgatag positions_6nt_m3 : (sig=; e-value=1) RC: positions_6nt_m4 : (sig=; e-value=1) RC: positions_6nt_m5 : (sig=; e-value=1) RC: positions_6nt_m6 : (sig=; e-value=1) RC: positions_6nt_m7 : (sig=; e-value=1) RC: positions_6nt_m8 : (sig=; e-value=1) RC: positions_6nt_m9 : (sig=; e-value=1) RC: positions_6nt_m10 : (sig=; e-value=1) RC:	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]
oligos_7nt_mkv2	oligos_7nt_mkv2_m1 assembly: cgatactatcgatagtatcg (sig=28.35; e-value=4.5e-29) RC: cgatactatcgatagtatcg oligos_7nt_mkv2_m2 assembly: aacatcgatactatcgatgt (sig=28.35; e-value=4.5e-29) RC: acatcgatagtatcgatgtt oligos_7nt_mkv2_m3 assembly: ccgccgcc (sig=5.03; e-value=9.3e-06) RC: ggcggcgg oligos_7nt_mkv2_m4 assembly: aaataaatat (sig=4.20; e-value=6.3e-05) RC: atatttattt oligos_7nt_mkv2_m5 assembly: gcgatactatcgatagtatc (sig=28.35; e-value=4.5e-29) RC: gatactatcgatagtatcgc oligos_7nt_mkv2_m6 assembly: gctatcgatactatcgca (sig=28.35; e-value=4.5e-29) RC: tgcgatagtatcgatagc oligos_7nt_mkv2_m7 assembly: ccgcccac (sig=1.57; e-value=0.027) RC: gtgggcgg oligos_7nt_mkv2_m8 assembly: aactatcgatagtatcga (sig=28.35; e-value=4.5e-29) RC: tcgatactatcgatagtt oligos_7nt_mkv2_m9 assembly: ccgatagtatcgatagc (sig=28.35; e-value=4.5e-29) RC: gctatcgatactatcgg oligos_7nt_mkv2_m10 assembly: taaaatat (sig=1.08; e-value=0.083) RC: atatttta	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]
local_words_7nt	Not a single significant pattern	[local_words_7nt]
positions_7nt	positions_7nt_m1 assembly: actatcgatagt (sig=4.64; e-value=2.3e-05) RC: actatcgatagt positions_7nt_m2 : (sig=; e-value=1) RC: positions_7nt_m3 : (sig=; e-value=1) RC: positions_7nt_m4 : (sig=; e-value=1) RC: positions_7nt_m5 : (sig=; e-value=1) RC: positions_7nt_m6 : (sig=; e-value=1) RC: positions_7nt_m7 : (sig=; e-value=1) RC: positions_7nt_m8 : (sig=; e-value=1) RC: positions_7nt_m9 : (sig=; e-value=1) RC: positions_7nt_m10 : (sig=; e-value=1) RC:	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]
dyads	dyads_m1 assembly: gatactatcgatagtatcgc (sig=41.36; e-value=4.4e-42) RC: gcgatactatcgatagtatc dyads_m2 assembly: aacatcgatagtatcgatgt (sig=41.36; e-value=4.4e-42) RC: acatcgatactatcgatgtt dyads_m3 assembly: taaaatat (sig=7.59; e-value=2.6e-08) RC: atatttta dyads_m4 assembly: gccgctgccg (sig=6.63; e-value=2.3e-07) RC: cggcagcggc dyads_m5 assembly: tataaatat (sig=4.99; e-value=1e-05) RC: atatttata dyads_m6 assembly: aaatnnnnnnntaaaa (sig=3.28; e-value=0.00052) RC: ttttannnnnnnattt dyads_m7 assembly: ccgatagtatcgatactatc (sig=41.36; e-value=4.4e-42) RC: gatagtatcgatactatcgg dyads_m8 assembly: gccgccgccc (sig=6.63; e-value=2.3e-07) RC: gggcggcggc dyads_m9 assembly: ccgnnnnnnnnnnnnnnnccg (sig=2.82; e-value=0.0015) RC: cggnnnnnnnnnnnnnnncgg dyads_m10 assembly: tataaataaa (sig=4.99; e-value=1e-05) RC: tttatttata	[ discovered words: text ] [ assembly: text sig matrices ] [ matrices: tab format transfac format ]

Motif discovery
Motif 1   oligos_6nt_mkv2_m1	k-mer sig=30.01; evalue=9.8e-31 ktCgatacTATCGATAgtatCGam KTCGATACTATCGATAGTATCGAM	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ktCgatacTATCGATAgtatCGam Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 25 (26.32%) Max nb of predicted sites per peak: 4  (TnaA-WD_peak_81::chr3R:30039578-30039880(.)) Mean nb of predicted sites per peak: 2.76	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 2   oligos_6nt_mkv2_m2	k-mer sig=30.01; evalue=9.8e-31 rhrmyatCGATAsTATCGayr YRTCGATASTATCGATRKYDY	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor rhrmyatCGATAsTATCGayr Dref Dref D 10 0.4762 0.875 0.417 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 30 (31.58%) Max nb of predicted sites per peak: 7  (TnaA-WD_peak_117::chrX:10744996-10745212(.)) Mean nb of predicted sites per peak: 2.33	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 3   oligos_6nt_mkv2_m3	k-mer sig=30.01; evalue=9.8e-31 wkkCGATAsTATCGATAswatCgm KCGATWSTATCGATASTATCGMMW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wkkCGATAsTATCGATAswatCgm Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 27 (28.42%) Max nb of predicted sites per peak: 5  (TnaA-WD_peak_77::chr3R:29063656-29063911(.)) Mean nb of predicted sites per peak: 2.15	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 4   oligos_6nt_mkv2_m4	k-mer sig=3.16; evalue=0.00069 wwAAAATAtmk MKATATTTTWW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wwAAAATAtmk br-Z3 br-Z3 R 9 0.6923 0.714 0.494 NA NA hb hb D 7 0.5385 0.750 0.404 NA NA Antp Antp D 6 0.5455 0.734 0.401 NA NA Total matches= 3		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 23 (24.21%) Max nb of predicted sites per peak: 3  (TnaA-WD_peak_35::chr2R:21501874-21502185(.)) Mean nb of predicted sites per peak: 1.17	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 5   oligos_6nt_mkv2_m5	k-mer sig=2.47; evalue=0.0034 ryAAGGAGhk MDCTCCTTRY	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ryAAGGAGhk z z D 6 0.6000 0.702 0.421 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 18 (18.95%) Max nb of predicted sites per peak: 2  (TnaA-WD_peak_41::chr3L:3196024-3196358(.)) Mean nb of predicted sites per peak: 1.17	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 6   oligos_6nt_mkv2_m6	k-mer sig=2.12; evalue=0.0076 yyGCCGCCCAcs SGTGGGCGGCRR	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor yyGCCGCCCAcs Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 20 (21.05%) Max nb of predicted sites per peak: 4  (TnaA-WD_peak_70::chr3R:17890901-17891278(.)) Mean nb of predicted sites per peak: 1.70	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 7   oligos_6nt_mkv2_m7	k-mer sig=1.94; evalue=0.011 waATAAATATwk MWATATTTATTW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor waATAAATATwk br-Z4 br-Z4 R 8 0.6667 0.795 0.530 NA NA zen zen D 6 0.5000 0.933 0.466 NA NA Antp Antp D 6 0.5000 0.873 0.436 NA NA Total matches= 5 (2 more)		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 25 (26.32%) Max nb of predicted sites per peak: 4  (TnaA-WD_peak_10::chr2L:7297537-7298811(.)) Mean nb of predicted sites per peak: 1.68	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 8   oligos_6nt_mkv2_m8	k-mer sig=1.73; evalue=0.019 rgAGGTGGsm KSCCACCTCY	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor rgAGGTGGsm sna sna D 8 0.7273 0.745 0.542 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 23 (24.21%) Max nb of predicted sites per peak: 3  (TnaA-WD_peak_50::chr3L:16557376-16557601(.)) Mean nb of predicted sites per peak: 1.13	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 9   oligos_6nt_mkv2_m9	k-mer sig=1.18; evalue=0.066 waAAGAAAwa TWTTTCTTTW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor waAAGAAAwa hb hb D 8 0.7273 0.703 0.511 NA NA zen zen D 6 0.6000 0.746 0.448 NA NA Total matches= 2		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 16 (16.84%) Max nb of predicted sites per peak: 3  (TnaA-WD_peak_10::chr2L:7297537-7298811(.)) Mean nb of predicted sites per peak: 1.50	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 10   oligos_6nt_mkv2_m10	k-mer sig=30.01; evalue=9.8e-31 wkyCGATAsTATCGATaswwtygw WCRAWWSTATCGATASTATCGRMW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wkyCGATAsTATCGATaswwtygw Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 28 (29.47%) Max nb of predicted sites per peak: 4  (TnaA-WD_peak_77::chr3R:29063656-29063911(.)) Mean nb of predicted sites per peak: 2.14	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 11   positions_6nt_m1	k-mer sig=8.74; evalue=1.8e-09 wrcTATCGATAgyw WRCTATCGATAGYW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wrcTATCGATAgyw Dref Dref D 10 0.7143 0.886 0.633 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 37 (38.95%) Max nb of predicted sites per peak: 6  (TnaA-WD_peak_34::chr2R:20245291-20245491(.)) Mean nb of predicted sites per peak: 2.78	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 12   positions_6nt_m2	k-mer sig=8.74; evalue=1.8e-09 wrCTATCGATAstw WASTATCGATAGYW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wrCTATCGATAstw Dref Dref R 10 0.7143 0.903 0.645 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 39 (41.05%) Max nb of predicted sites per peak: 6  (TnaA-WD_peak_117::chrX:10744996-10745212(.)) Mean nb of predicted sites per peak: 2.51	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 13   oligos_7nt_mkv2_m1	k-mer sig=28.35; evalue=4.5e-29 ktCGatACTATCGATAgTatCgam KTCGATACTATCGATAGTATCGAM	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ktCGatACTATCGATAgTatCgam Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 23 (24.21%) Max nb of predicted sites per peak: 4  (TnaA-WD_peak_81::chr3R:30039578-30039880(.)) Mean nb of predicted sites per peak: 2.74	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 14   oligos_7nt_mkv2_m2	k-mer sig=28.35; evalue=4.5e-29 smwcyatCGATAsTATCGAtrkwk MWMYATCGATASTATCGATRGWKS	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor smwcyatCGATAsTATCGAtrkwk Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 27 (28.42%) Max nb of predicted sites per peak: 5  (TnaA-WD_peak_117::chrX:10744996-10745212(.)) Mean nb of predicted sites per peak: 2.30	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 15   oligos_7nt_mkv2_m3	k-mer sig=5.03; evalue=9.3e-06 cgCCGCCGCCgm KCGGCGGCGGCG	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor cgCCGCCGCCgm brk brk D 7 0.5833 0.741 0.432 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 20 (21.05%) Max nb of predicted sites per peak: 8  (TnaA-WD_peak_8::chr2L:6837951-6838212(.)) Mean nb of predicted sites per peak: 2.35	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 16   oligos_7nt_mkv2_m4	k-mer sig=4.20; evalue=6.3e-05 wtaaATAAATAtwk MWATATTTATTTAW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wtaaATAAATAtwk br-Z4 br-Z4 R 8 0.5714 0.806 0.461 NA NA zen zen D 6 0.4286 0.953 0.408 NA NA Total matches= 2		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 27 (28.42%) Max nb of predicted sites per peak: 4  (TnaA-WD_peak_10::chr2L:7297537-7298811(.)) Mean nb of predicted sites per peak: 1.70	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 17   oligos_7nt_mkv2_m5	k-mer sig=28.35; evalue=4.5e-29 mkkCGaTACTATCGATAstatCga TCGATASTATCGATAGTATCGMMK	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor mkkCGaTACTATCGATAstatCga Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 23 (24.21%) Max nb of predicted sites per peak: 5  (TnaA-WD_peak_112::chrX:1033062-1033340(.)) Mean nb of predicted sites per peak: 2.65	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 18   oligos_7nt_mkv2_m6	k-mer sig=28.35; evalue=4.5e-29 ahkctATCGATAsTATCGmyrg CYRKCGATASTATCGATAGMDT	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ahkctATCGATAsTATCGmyrg Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 33 (34.74%) Max nb of predicted sites per peak: 6  (TnaA-WD_peak_117::chrX:10744996-10745212(.)) Mean nb of predicted sites per peak: 2.09	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 19   oligos_7nt_mkv2_m7	k-mer sig=1.57; evalue=0.027 sgCCGCCCACrc GYGTGGGCGGCS	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor sgCCGCCCACrc Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 19 (20.00%) Max nb of predicted sites per peak: 4  (TnaA-WD_peak_70::chr3R:17890901-17891278(.)) Mean nb of predicted sites per peak: 1.89	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 20   oligos_7nt_mkv2_m8	k-mer sig=28.35; evalue=4.5e-29 gawactATCGATAsTATCGacw WGTCGATASTATCGATAGTWTC	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor gawactATCGATAsTATCGacw Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 33 (34.74%) Max nb of predicted sites per peak: 5  (TnaA-WD_peak_117::chrX:10744996-10745212(.)) Mean nb of predicted sites per peak: 2.27	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 21   oligos_7nt_mkv2_m9	k-mer sig=28.35; evalue=4.5e-29 hrtCGATAsTATCGAtaghww WWDCTATCGATASTATCGAYD	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor hrtCGATAsTATCGAtaghww Dref Dref R 10 0.4762 0.848 0.404 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 28 (29.47%) Max nb of predicted sites per peak: 6  (TnaA-WD_peak_117::chrX:10744996-10745212(.)) Mean nb of predicted sites per peak: 2.43	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 22   oligos_7nt_mkv2_m10	k-mer sig=1.08; evalue=0.083 whtAAAATATwk MWATATTTTADW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor whtAAAATATwk hb hb D 9 0.7500 0.746 0.559 NA NA zen zen D 6 0.5000 0.803 0.402 NA NA Total matches= 2		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 26 (27.37%) Max nb of predicted sites per peak: 3  (TnaA-WD_peak_35::chr2R:21501874-21502185(.)) Mean nb of predicted sites per peak: 1.35	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 23   positions_7nt_m1	k-mer sig=4.64; evalue=2.3e-05 awacTATCGATAgtwt AWACTATCGATAGTWT	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor awacTATCGATAgtwt Dref Dref D 10 0.6250 0.896 0.560 NA NA Total matches= 1		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 38 (40.00%) Max nb of predicted sites per peak: 6  (TnaA-WD_peak_117::chrX:10744996-10745212(.)) Mean nb of predicted sites per peak: 2.74	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 24   dyads_m1	k-mer sig=41.36; evalue=4.4e-42 tcratactATCGATAGTAtCGmcd HGKCGATACTATCGATAGTATYGA	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor tcratactATCGATAGTAtCGmcd Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 31 (32.63%) Max nb of predicted sites per peak: 5  (TnaA-WD_peak_77::chr3R:29063656-29063911(.)) Mean nb of predicted sites per peak: 2.45	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 25   dyads_m2	k-mer sig=41.36; evalue=4.4e-42 vmwmyatCGATAsTATCGatrkwd HWMYATCGATASTATCGATRKWKB	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor vmwmyatCGATAsTATCGatrkwd Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 28 (29.47%) Max nb of predicted sites per peak: 7  (TnaA-WD_peak_117::chrX:10744996-10745212(.)) Mean nb of predicted sites per peak: 2.43	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 26   dyads_m3	k-mer sig=7.59; evalue=2.6e-08 whtAAAATATwk MWATATTTTADW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor whtAAAATATwk hb hb D 9 0.7500 0.744 0.558 NA NA zen zen D 6 0.5000 0.805 0.402 NA NA Total matches= 2		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 25 (26.32%) Max nb of predicted sites per peak: 4  (TnaA-WD_peak_35::chr2R:21501874-21502185(.)) Mean nb of predicted sites per peak: 1.48	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 27   dyads_m4	k-mer sig=6.63; evalue=2.3e-07 cygCCGCyGCCgcc GGCGGCRGCGGCRG	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor cygCCGCyGCCgcc Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 19 (20.00%) Max nb of predicted sites per peak: 10  (TnaA-WD_peak_8::chr2L:6837951-6838212(.)) Mean nb of predicted sites per peak: 2.53	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 28   dyads_m5	k-mer sig=4.99; evalue=1e-05 wwTATAAATATww WWATATTTATAWW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wwTATAAATATww br-Z4 br-Z4 R 8 0.6154 0.804 0.495 NA NA cad cad R 8 0.5714 0.707 0.404 NA NA Total matches= 2		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 19 (20.00%) Max nb of predicted sites per peak: 7  (TnaA-WD_peak_17::chr2L:14615881-14616429(.)) Mean nb of predicted sites per peak: 2.00	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 29   dyads_m6	k-mer sig=3.28; evalue=0.00052 wrAAATwwrtwwwtAAAAww WWTTTTAWWWAYWWATTTYW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wrAAATwwrtwwwtAAAAww Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 25 (26.32%) Max nb of predicted sites per peak: 4  (TnaA-WD_peak_38::chr2R:23523674-23523963(.)) Mean nb of predicted sites per peak: 1.68	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 30   dyads_m7	k-mer sig=41.36; evalue=4.4e-42 wktCGATAsTATCGATaswrtyga TCRAYWSTATCGATASTATCGAMW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wktCGATAsTATCGATaswrtyga Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 28 (29.47%) Max nb of predicted sites per peak: 4  (TnaA-WD_peak_77::chr3R:29063656-29063911(.)) Mean nb of predicted sites per peak: 2.21	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 31   dyads_m8	k-mer sig=6.63; evalue=2.3e-07 cyGCCGCCGCCsmy RKSGGCGGCGGCRG	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor cyGCCGCCGCCsmy Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 21 (22.11%) Max nb of predicted sites per peak: 8  (TnaA-WD_peak_8::chr2L:6837951-6838212(.)) Mean nb of predicted sites per peak: 2.19	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 32   dyads_m9	k-mer sig=2.82; evalue=0.0015 ckCCGycgmsgmskcsgvckCCGcy RGCGGMGBCSGMSKCSKCGRCGGMG	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor ckCCGycgmsgmskcsgvckCCGcy Total matches= 0		No match
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 21 (22.11%) Max nb of predicted sites per peak: 9  (TnaA-WD_peak_55::chr3L:19143900-19144188(.)) Mean nb of predicted sites per peak: 2.24	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]
Motif 33   dyads_m10	k-mer sig=4.99; evalue=1e-05 wwTATAAATAAAtw WATTTATTTATAWW	[ k-mers: statistics assemblies ] [ matrix: tab_format transfac_format ]
DMMPMM_drosophila name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match       columns aligned correlation cor wwTATAAATAAAtw zen zen D 6 0.4286 0.958 0.410 NA NA br-Z1 br-Z1 D 8 0.5714 0.702 0.401 NA NA Total matches= 2		[ match table: html text ] [ alignments (logos): html text ]
Predicted sites on test peaks	Distribution of sites Nb of predicted sites per peak Nb peaks with at least one predicted site: 24 (25.26%) Max nb of predicted sites per peak: 4  (TnaA-WD_peak_46::chr3L:10871817-10873573(.)) Mean nb of predicted sites per peak: 1.88	[ sites: text ] [ distribution: text ] [ sites per peak: text ] [ enrichment: text graph ]

Command:  peak-motifs  -v 1 -title tna-wd -i $RSAT/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.030005_2025-04-26.030005_uHCQ4m/peak-motifspeak_seq -max_seq_len 1000 -markov auto -disco oligos,dyads,positions,local_words -nmotifs 10 -minol 6 -maxol 7 -no_merge_lengths -2str -origin center -motif_db DMMPMM_drosophila tf $RSAT/public_html/motif_databases/DMMPMM_drosophila/dmmpmm_PCM.tf -scan_markov 1 -task purge,seqlen,composition,disco,merge_motifs,split_motifs,motifs_vs_motifs,timelog,archive,synthesis,small_summary,motifs_vs_db,scan -prefix peak-motifs -noov -img_format png -outdir $RSAT/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.030005_2025-04-26.030005_uHCQ4m

Warning: Not a single pattern was found in file tmp/www-data/2025/04/26/peak-motifs.2025-04-26.030005_2025-04-26.030005_uHCQ4m/results/local_words_6nt/peak-motifs_local_words-2str-noov_6nt_windgroup50.tab

Warning: Not a single pattern was found in file tmp/www-data/2025/04/26/peak-motifs.2025-04-26.030005_2025-04-26.030005_uHCQ4m/results/local_words_7nt/peak-motifs_local_words-2str-noov_7nt_windgroup50.tab