; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155738_2025-04-26.155738_OSbARD/results/oligos_6nt_mkv1/peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155738_2025-04-26.155738_OSbARD/results/oligos_6nt_mkv1/peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155738_2025-04-26.155738_OSbARD/results/oligos_6nt_mkv1/peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155738_2025-04-26.155738_OSbARD/results/oligos_6nt_mkv1/peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155738_2025-04-26.155738_OSbARD/results/oligos_6nt_mkv1/peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	4	3	0	8	0	0	8	0	7	2
c	0	0	0	0	0	0	0	0	0	1
g	3	5	8	0	8	8	0	8	0	4
t	1	0	0	0	0	0	0	0	1	1
//
; Sites	8
>site_0
AAGAGGAGTT
>site_1
AAGAGGAGAC
>site_2
TGGAGGAGAG
>site_3
GAGAGGAGAG
>site_4
GGGAGGAGAG
>site_5
AGGAGGAGAA
>site_6
AGGAGGAGAA
>site_7
GGGAGGAGAG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155738_2025-04-26.155738_OSbARD/results/oligos_6nt_mkv1//peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155738_2025-04-26.155738_OSbARD/results/oligos_6nt_mkv1//peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices_logo_m1_rc.png
;
a	2	6	0	0	10	0	10	0	3	2
c	0	1	0	0	0	0	0	0	2	1
g	8	3	10	10	0	10	0	10	3	4
t	0	0	0	0	0	0	0	0	2	3
//
; Sites	10
>site_0
GGGGAGAGAA
>site_1
GAGGAGAGGG
>site_2
GGGGAGAGCG
>site_3
GAGGAGAGGG
>site_4
GGGGAGAGGC
>site_5
GAGGAGAGAA
>site_6
AAGGAGAGAG
>site_7
ACGGAGAGCT
>site_8
GAGGAGAGTT
>site_9
GAGGAGAGTT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155738_2025-04-26.155738_OSbARD/results/oligos_6nt_mkv1//peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155738_2025-04-26.155738_OSbARD/results/oligos_6nt_mkv1//peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices_logo_m2_rc.png
;
a	4	3	0	0	1	0	10	0	5	4
c	0	2	0	0	0	0	0	0	3	1
g	4	4	10	10	9	10	0	10	2	3
t	2	1	0	0	0	0	0	0	0	2
//
; Sites	10
>site_0
GAGGGGAGCC
>site_1
AGGGGGAGAG
>site_2
AAGGGGAGAA
>site_3
TGGGGGAGCT
>site_4
GGGGGGAGAG
>site_5
TTGGGGAGAG
>site_6
GAGGGGAGAA
>site_7
AGGGGGAGGA
>site_8
ACGGAGAGCT
>site_9
GCGGGGAGGA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155738_2025-04-26.155738_OSbARD/results/oligos_6nt_mkv1//peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155738_2025-04-26.155738_OSbARD/results/oligos_6nt_mkv1//peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices_logo_m3_rc.png
;
a	5	6	12	0	14	0	1	3	0	8	2
c	3	1	0	0	0	0	0	0	0	0	2
g	3	5	2	14	0	13	13	11	14	2	6
t	3	2	0	0	0	1	0	0	0	4	4
//
; Sites	14
>site_0
TTAGATGGGTG
>site_1
AAAGAGGAGTT
>site_2
CAGGAGGGGAG
>site_3
CAAGAGGGGGA
>site_4
CAAGAGGAGAC
>site_5
GGAGAGGGGAT
>site_6
AAAGAGGGGAC
>site_7
TTGGAGGGGTT
>site_8
AGAGAGGGGTT
>site_9
GCAGAGGGGGG
>site_10
AGAGAGAGGAG
>site_11
AGAGAGGAGAG
>site_12
GGAGAGGGGAA
>site_13
TAAGAGGGGAG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155738_2025-04-26.155738_OSbARD/results/oligos_6nt_mkv1//peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155738_2025-04-26.155738_OSbARD/results/oligos_6nt_mkv1//peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices_logo_m4_rc.png
;
a	1	2	0	0	4	0	1	0	2	0
c	2	2	7	0	0	7	0	0	2	2
g	4	1	0	7	2	0	5	7	1	3
t	0	2	0	0	1	0	1	0	2	2
//
; Sites	7
>site_0
CCCGACAGAT
>site_1
GTCGTCTGTC
>site_2
CTCGACGGCG
>site_3
GACGGCGGGC
>site_4
GGCGACGGCG
>site_5
GACGGCGGTT
>site_6
ACCGACGGAG
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155738_2025-04-26.155738_OSbARD/results/oligos_6nt_mkv1//peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155738_2025-04-26.155738_OSbARD/results/oligos_6nt_mkv1//peak-motifs_oligos-1str-noov_6nt_mkv1_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2025-04-26.155743
; Job done	2025-04-26.155745
; Seconds	0.13
;	user	0.13
;	system	0.04
;	cuser	1.1
;	csystem	0.24
