; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155957_2025-04-26.155957_kQZNmB/results/oligos_7nt_mkv1/peak-motifs_oligos-1str-noov_7nt_mkv1_pssm_count_matrices.tf -from tf -to tab -return counts -return sites -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155957_2025-04-26.155957_kQZNmB/results/oligos_7nt_mkv1/peak-motifs_oligos-1str-noov_7nt_mkv1_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155957_2025-04-26.155957_kQZNmB/results/oligos_7nt_mkv1/peak-motifs_oligos-1str-noov_7nt_mkv1_pssm_count_matrices_links.txt
; Input files
;	input	/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155957_2025-04-26.155957_kQZNmB/results/oligos_7nt_mkv1/peak-motifs_oligos-1str-noov_7nt_mkv1_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155957_2025-04-26.155957_kQZNmB/results/oligos_7nt_mkv1/peak-motifs_oligos-1str-noov_7nt_mkv1_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	3	2	2	0	0	0	0	0	0	0	0	0	1	5	3	2
c	2	5	5	6	6	5	1	7	0	7	6	7	6	1	1	4
g	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
t	1	0	0	1	1	2	6	0	7	0	1	0	0	1	3	0
//
; Sites	7
>site_0
AACCCCTCTCCCCTTG
>site_1
GCCCCCTCTCTCAATC
>site_2
TCCTCCTCTCCCCAAC
>site_3
CAACCCTCTCCCCAAA
>site_4
ACCCCCTCTCCCCCTC
>site_5
CCCCCTCCTCCCCACA
>site_6
ACACTTTCTCCCCAAC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155957_2025-04-26.155957_kQZNmB/results/oligos_7nt_mkv1//peak-motifs_oligos-1str-noov_7nt_mkv1_pssm_count_matrices_logo_m1.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155957_2025-04-26.155957_kQZNmB/results/oligos_7nt_mkv1//peak-motifs_oligos-1str-noov_7nt_mkv1_pssm_count_matrices_logo_m1_rc.png
;
a	6	5	1	0	0	0	0	0	0	1	3
c	2	3	11	0	9	12	0	12	9	6	6
g	1	0	0	0	0	0	0	0	1	0	1
t	3	4	0	12	3	0	12	0	2	5	2
//
; Sites	12
>site_0
ATCTCCTCCCA
>site_1
ATCTCCTCCCA
>site_2
AACTCCTCGAT
>site_3
AACTTCTCCTT
>site_4
CAATCCTCCTC
>site_5
TCCTCCTCCTC
>site_6
TCCTCCTCTCC
>site_7
GTCTCCTCTTG
>site_8
TTCTCCTCCTA
>site_9
CCCTCCTCCCC
>site_10
AACTTCTCCCC
>site_11
AACTTCTCCCC
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155957_2025-04-26.155957_kQZNmB/results/oligos_7nt_mkv1//peak-motifs_oligos-1str-noov_7nt_mkv1_pssm_count_matrices_logo_m2.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155957_2025-04-26.155957_kQZNmB/results/oligos_7nt_mkv1//peak-motifs_oligos-1str-noov_7nt_mkv1_pssm_count_matrices_logo_m2_rc.png
;
a	3	3	2	0	0	0	0	0	0	0	0	0	1	1	1
c	0	0	0	0	3	3	0	3	0	2	3	0	0	0	0
g	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
t	0	0	1	3	0	0	3	0	0	1	0	3	2	2	2
//
; Sites	3
>site_0
AATTCCTCGTCTAAA
>site_1
AAATCCTCGCCTTTT
>site_2
AAATCCTCGCCTTTT
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155957_2025-04-26.155957_kQZNmB/results/oligos_7nt_mkv1//peak-motifs_oligos-1str-noov_7nt_mkv1_pssm_count_matrices_logo_m3.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155957_2025-04-26.155957_kQZNmB/results/oligos_7nt_mkv1//peak-motifs_oligos-1str-noov_7nt_mkv1_pssm_count_matrices_logo_m3_rc.png
;
a	3	2	0	7	0	6	0	6	7	3	4
c	1	2	7	0	7	0	1	0	0	0	2
g	0	1	0	0	0	0	0	0	0	4	0
t	3	2	0	0	0	1	6	1	0	0	1
//
; Sites	7
>site_0
TACACATTAAT
>site_1
ATCACATAAGA
>site_2
TTCACATAAAC
>site_3
CCCACATAAGA
>site_4
TCCACATAAAA
>site_5
AACACTTAAGC
>site_6
AGCACACAAGA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155957_2025-04-26.155957_kQZNmB/results/oligos_7nt_mkv1//peak-motifs_oligos-1str-noov_7nt_mkv1_pssm_count_matrices_logo_m4.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155957_2025-04-26.155957_kQZNmB/results/oligos_7nt_mkv1//peak-motifs_oligos-1str-noov_7nt_mkv1_pssm_count_matrices_logo_m4_rc.png
;
a	3	9	0	15	0	0	13	13	0	14	7	8
c	1	2	1	0	1	0	0	0	0	0	2	2
g	2	0	0	0	0	0	1	0	0	1	0	1
t	9	4	14	0	14	15	1	2	15	0	6	4
//
; Sites	15
>site_0
GATATTAATATT
>site_1
AATATTAATATC
>site_2
TTTATTAATATA
>site_3
TATATTAATAAA
>site_4
TATACTAATAAA
>site_5
AATATTAATGTG
>site_6
CACATTAATATT
>site_7
TCTATTGATAAA
>site_8
GATATTATTAAC
>site_9
TCTATTATTACA
>site_10
TATATTTATACT
>site_11
ATTATTAATAAA
>site_12
TTTATTAATAAT
>site_13
TTTATTAATATA
>site_14
TATATTAATAAA
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155957_2025-04-26.155957_kQZNmB/results/oligos_7nt_mkv1//peak-motifs_oligos-1str-noov_7nt_mkv1_pssm_count_matrices_logo_m5.png
; logo file:/var/www/html/rsat/public_html/tmp/www-data/2025/04/26/peak-motifs.2025-04-26.155957_2025-04-26.155957_kQZNmB/results/oligos_7nt_mkv1//peak-motifs_oligos-1str-noov_7nt_mkv1_pssm_count_matrices_logo_m5_rc.png
;
; Host name	rsat
; Job started	2025-04-26.160007
; Job done	2025-04-26.160008
; Seconds	0.15
;	user	0.15
;	system	0.06
;	cuser	1.17
;	csystem	0.16
